Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,032,764 C→T R144H (CGT→CAT)  lysS ← lysine tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,032,7640CT98.8% 1584.0 / ‑0.3 424R144H (CGT→CAT) lysSlysine tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base C (2/3);  new base T (215/203);  total (217/207)
Fisher's exact test for biased strand distribution p-value = 6.78e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

Only 100 of 435 total aligned reads displayed.

AGATCGAGATAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGACGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGTCCCATTTTT  >  NC_000913/3032674‑3032854
                                                                                          |                                                                                          
   tCGAGATAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACt                                                                                      >  2:3534117/1‑94 (MQ=255)
    cGAGATAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTc                                                                                     >  1:5614579/1‑94 (MQ=255)
     gagaTACCGCTAACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCg                                                                                    <  1:2463023/94‑1 (MQ=255)
     gagaTAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGTAGTGCTTTGGTCAGCAGATGCAACTCg                                                                                    >  1:8091722/1‑94 (MQ=255)
     gagaTAACGCTGACGATAGCGCGCTTCCTGAGCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCg                                                                                    <  2:2699441/94‑1 (MQ=255)
      agaTAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCgg                                                                                   >  2:3174996/1‑94 (MQ=255)
      agaTAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCgg                                                                                   <  1:750596/94‑1 (MQ=255)
      agaTAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCgg                                                                                   >  2:4780272/1‑94 (MQ=255)
      agaTAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCgg                                                                                   <  2:4631689/94‑1 (MQ=255)
       gaTAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCggg                                                                                  >  2:1271099/1‑93 (MQ=255)
        aTAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTg                                                                                 >  2:1061546/1‑94 (MQ=255)
        aTAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTg                                                                                 <  1:5486150/94‑1 (MQ=255)
        aTAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTg                                                                                 <  1:607673/94‑1 (MQ=255)
                 aCGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATa                                                                        <  2:4338852/94‑1 (MQ=255)
                 aCGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATa                                                                        <  1:6188836/94‑1 (MQ=255)
                  ggATGGCGCGCGTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAg                                                                       <  2:3657360/93‑1 (MQ=255)
                  cGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAg                                                                       >  2:1930156/1‑94 (MQ=255)
                  cGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAg                                                                       >  2:3109659/1‑94 (MQ=255)
                   gATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGa                                                                      >  1:6901702/1‑94 (MQ=255)
                   gATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGa                                                                      >  2:2513412/1‑94 (MQ=255)
                   gATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGa                                                                      >  2:8440311/1‑94 (MQ=255)
                   gATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATACGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGa                                                                      >  1:293104/1‑94 (MQ=255)
                     tAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACa                                                                    <  2:10394887/94‑1 (MQ=255)
                       gcgcgcCTCCTGAGCCTGCACGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGt                                                                  <  2:3909941/94‑1 (MQ=255)
                        cgcgcTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGtt                                                                 >  1:3117618/1‑94 (MQ=255)
                        cgcgcTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGtt                                                                 <  2:3288772/94‑1 (MQ=255)
                         gcgcTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTc                                                                <  1:9372339/94‑1 (MQ=255)
                          cgcTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCg                                                               >  1:1333125/1‑94 (MQ=255)
                           gcTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGc                                                              >  2:5100627/1‑94 (MQ=255)
                             ttCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCg                                                            <  2:4160407/94‑1 (MQ=255)
                             ttCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCg                                                            >  2:906304/1‑94 (MQ=255)
                              tCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCgg                                                           <  2:5776301/94‑1 (MQ=255)
                              tCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCgg                                                           >  1:7915320/1‑94 (MQ=255)
                              tCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCgg                                                           >  2:526480/1‑94 (MQ=255)
                                cTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggtt                                                         >  2:6028983/1‑94 (MQ=255)
                                cTGATCCTGCAAGCCGAGGAATTTCTCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGAGGCAACTCGGTGCAGTGGATAGACAGTTCGCCggtt                                                         <  1:4764920/94‑1 (MQ=255)
                                 tGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCATCTCGGTGCAGTGGATAGACAGTTCGCCggttt                                                        >  2:5342529/1‑94 (MQ=255)
                                 tGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttt                                                        <  1:3395849/94‑1 (MQ=255)
                                 tGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttt                                                        <  1:7173846/94‑1 (MQ=255)
                                  gATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggtttt                                                       >  1:3503827/1‑94 (MQ=255)
                                   aTCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttttg                                                      >  2:6557475/1‑94 (MQ=255)
                                   aTCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttttg                                                      >  2:8533226/1‑94 (MQ=255)
                                     ccTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttttggt                                                    <  2:6375727/94‑1 (MQ=255)
                                     ccTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttttggt                                                    <  2:8262239/94‑1 (MQ=255)
                                     ccTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttttggt                                                    >  2:6076262/1‑94 (MQ=255)
                                      cTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttttggtt                                                   >  1:7663177/1‑94 (MQ=255)
                                      cTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttttggtt                                                   >  1:10377850/1‑94 (MQ=255)
                                      cTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttttggtt                                                   >  2:8931587/1‑94 (MQ=255)
                                      cTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttttggtt                                                   <  1:6589426/94‑1 (MQ=255)
                                       tGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttttggttt                                                  <  1:3064989/94‑1 (MQ=255)
                                        gCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCggttttggtttt                                                 <  1:191203/94‑1 (MQ=255)
                                          aaGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGa                                               <  1:258868/94‑1 (MQ=255)
                                          aaGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGa                                               <  1:5251456/94‑1 (MQ=255)
                                              cGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAg                                           <  1:2198622/94‑1 (MQ=255)
                                              cGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAg                                           <  1:3926790/94‑1 (MQ=255)
                                              cGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAg                                           >  2:7293161/1‑94 (MQ=255)
                                               gTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGc                                          >  1:588544/1‑94 (MQ=255)
                                               gTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGc                                          <  2:2039944/94‑1 (MQ=255)
                                               gTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGc                                          >  1:5016213/1‑94 (MQ=255)
                                                tGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCt                                         <  1:10100008/94‑1 (MQ=255)
                                                 ggAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCtt                                        <  1:9615299/94‑1 (MQ=255)
                                                  gAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTa                                       >  1:6334308/1‑94 (MQ=255)
                                                     tttATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCt                                    <  1:424164/94‑1 (MQ=255)
                                                       tATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCttt                                  <  1:9938178/94‑1 (MQ=255)
                                                       tATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCttt                                  >  1:7383516/1‑94 (MQ=255)
                                                        tgccGGCAGCGGGCGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTc                                 <  2:2247345/92‑1 (MQ=255)
                                                        aTCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTc                                 <  1:9692808/94‑1 (MQ=255)
                                                         tCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTcg                                >  2:7486876/1‑94 (MQ=255)
                                                         tCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTcg                                <  1:1517005/94‑1 (MQ=255)
                                                          ccGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTcgc                               <  2:5533043/94‑1 (MQ=255)
                                                          ccGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTcgc                               <  2:8718992/94‑1 (MQ=255)
                                                           cGGCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTcgcg                              <  2:5864721/94‑1 (MQ=255)
                                                            ggCAGCGGACGCAGTGCTTTGGTCAGCAGACGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCgcgc                             >  2:8011278/1‑94 (MQ=255)
                                                             gCAGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACCGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGcc                            <  2:9276238/94‑1 (MQ=255)
                                                               aGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGa                          >  2:9499982/1‑94 (MQ=255)
                                                               aGCGGACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCACGCCGa                          >  2:4501689/1‑94 (MQ=255)
                                                                   gACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGAt                      <  1:4520823/94‑1 (MQ=255)
                                                                   gACGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGAt                      <  2:4229056/94‑1 (MQ=255)
                                                                   gACGCAGTGCTTTCGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGAt                      <  1:2724874/94‑1 (MQ=255)
                                                                     cGCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGt                    >  1:8682247/1‑94 (MQ=255)
                                                                      gCAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTc                   <  1:7804415/94‑1 (MQ=255)
                                                                       cAGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCg                  <  2:7845776/94‑1 (MQ=255)
                                                                        aGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGc                 >  1:3663023/1‑94 (MQ=255)
                                                                        aGTGCTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTAGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGc                 >  2:1683907/1‑94 (MQ=255)
                                                                            cTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAg             <  1:8275889/94‑1 (MQ=255)
                                                                            cTTTGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAg             <  2:9649902/94‑1 (MQ=255)
                                                                             tttGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAgg            <  1:1060618/94‑1 (MQ=255)
                                                                             tttGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAgg            <  1:9855363/94‑1 (MQ=255)
                                                                             tttGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAgg            <  1:32344/94‑1 (MQ=255)
                                                                              ttGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGt           <  2:2797650/94‑1 (MQ=255)
                                                                               tGGTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGTc          <  1:7305967/94‑1 (MQ=255)
                                                                                ggTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGTcc         <  2:7012175/94‑1 (MQ=255)
                                                                                 gTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAGCAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGTccc        >  1:9105086/1‑94 (MQ=255)
                                                                                 gTCAGCAGATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAAGTccc        <  2:1016698/94‑1 (MQ=255)
                                                                                   gagcagATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGTCCCAt      <  2:8103177/93‑1 (MQ=255)
                                                                                   cagcagATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGTCCCAt      >  1:2247652/1‑94 (MQ=255)
                                                                                   cagcagATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGTCCCAt      >  1:8965837/1‑94 (MQ=255)
                                                                                      cagATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGTCCCAtttt   <  2:3031451/94‑1 (MQ=255)
                                                                                       agATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGTCCCAttttt  <  1:1463968/94‑1 (MQ=255)
                                                                                       agATGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGCCCCAttttt  >  1:7048126/1‑94 (MQ=255)
                                                                                          |                                                                                          
AGATCGAGATAACGCTGACGATAGCGCGCTTCCTGATCCTGCAAGCCGTGGAATTTATCCGGCAGCGGACGCAGTGCTTTGGTCAGCAGACGCAACTCGGTGCAGTGGATAGACAGTTCGCCGGTTTTGGTTTTGAACAGCTTACCTTTCGCGCCGAGGATGTCGCCGAGGTCCCATTTTT  >  NC_000913/3032674‑3032854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 305 total aligned reads displayed.
CGATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCC  >  NC_000913/3037382‑3037568
                                                                                             |                                                                                             
CGATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACC                                                                                               <  SRR4302545.3169008/94‑1 (MQ=60)
CGATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACC                                                                                               <  SRR4302545.36322/94‑1 (MQ=60)
CGATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACC                                                                                               <  SRR4302545.889847/94‑1 (MQ=60)
CGATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACC                                                                                               <  SRR4302545.2193489/94‑1 (MQ=60)
  ATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGG                                                                                             <  SRR4302545.6220025/94‑1 (MQ=60)
  ATTAATGCTGCCTCTAATAACCCTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGG                                                                                             <  SRR4302545.5205679/94‑1 (MQ=60)
   TTAATGGTGCCTGTAATAAACGTCCGACCTGCGCTTCGCTTAGATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGG                                                                                            <  SRR4302545.5720055/94‑1 (MQ=60)
     AATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAT                                                                                          <  SRR4302545.4359583/94‑1 (MQ=60)
      ATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATC                                                                                         <  SRR4302545.7487147/94‑1 (MQ=60)
      ATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATC                                                                                         <  SRR4302545.1270572/94‑1 (MQ=60)
      ATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATC                                                                                         <  SRR4302545.10356407/94‑1 (MQ=60)
      ATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATC                                                                                         <  SRR4302545.6760677/94‑1 (MQ=60)
      ATGGTGCCTCTAATAAACGTTCGCCCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATC                                                                                         <  SRR4302545.5130695/94‑1 (MQ=60)
      ATGGGGCCTGTAATAAACGTTCGCCCTGCGCTTCGCTTACATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATC                                                                                         >  SRR4302545.5291114/1‑94 (MQ=60)
       TGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCG                                                                                        <  SRR4302545.1018575/94‑1 (MQ=60)
       TGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCG                                                                                        <  SRR4302545.6614180/94‑1 (MQ=60)
         GTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTC                                                                                      <  SRR4302545.8523158/94‑1 (MQ=60)
         GTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTC                                                                                      <  SRR4302545.8982185/94‑1 (MQ=60)
         GTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTC                                                                                      <  SRR4302545.10057711/94‑1 (MQ=60)
          TGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCT                                                                                     <  SRR4302545.6684371/94‑1 (MQ=60)
           GCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTT                                                                                    <  SRR4302545.351192/94‑1 (MQ=60)
            CCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTC                                                                                   >  SRR4302545.10623183/1‑94 (MQ=60)
            CCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTC                                                                                   >  SRR4302545.8906817/1‑94 (MQ=60)
             CTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCA                                                                                  <  SRR4302545.9294737/94‑1 (MQ=60)
             CTGTAATAAACGTTCGAACTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCA                                                                                  <  SRR4302545.3433269/94‑1 (MQ=60)
              TGTAATAACCTGTCGACCTGCTCTTCGCTTAAATCTTTGGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCAC                                                                                 <  SRR4302545.48808/94‑1 (MQ=60)
              TGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCAC                                                                                 >  SRR4302545.6544318/1‑94 (MQ=60)
              TGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCAC                                                                                 >  SRR4302545.1998183/1‑94 (MQ=60)
               TTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACG                                                                                <  SRR4302545.2864593/94‑1 (MQ=60)
               GTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACG                                                                                <  SRR4302545.5028067/94‑1 (MQ=60)
                TAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGA                                                                               >  SRR4302545.4871467/1‑94 (MQ=60)
                 AATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAA                                                                              <  SRR4302545.5788445/94‑1 (MQ=60)
                 AATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAA                                                                              >  SRR4302545.2726654/1‑94 (MQ=60)
                 AATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAA                                                                              <  SRR4302545.3172834/94‑1 (MQ=60)
                 AATAAACGTACGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAA                                                                              >  SRR4302545.7347316/1‑94 (MQ=60)
                  ATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAA                                                                             >  SRR4302545.7178827/1‑94 (MQ=60)
                  ATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAA                                                                             >  SRR4302545.2731247/1‑94 (MQ=60)
                  ATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAA                                                                             <  SRR4302545.485750/94‑1 (MQ=60)
                  ATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAA                                                                             >  SRR4302545.978507/1‑94 (MQ=60)
                  ATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAA                                                                             <  SRR4302545.485751/94‑1 (MQ=60)
                  ATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAA                                                                             <  SRR4302545.4235852/94‑1 (MQ=60)
                  ATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAA                                                                             <  SRR4302545.10914984/94‑1 (MQ=60)
                   TAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAAC                                                                            <  SRR4302545.5615184/94‑1 (MQ=60)
                    AAACGTTGGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACT                                                                           <  SRR4302545.9412112/94‑1 (MQ=60)
                    AAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACT                                                                           >  SRR4302545.8755652/1‑94 (MQ=60)
                    AAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACT                                                                           >  SRR4302545.2349793/1‑94 (MQ=60)
                    AAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACT                                                                           >  SRR4302545.8125545/1‑94 (MQ=60)
                     AACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTT                                                                          <  SRR4302545.5302581/94‑1 (MQ=60)
                      ACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTT                                                                         >  SRR4302545.2378804/1‑94 (MQ=60)
                      ACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTT                                                                         >  SRR4302545.2703467/1‑94 (MQ=60)
                      ACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTT                                                                         <  SRR4302545.6335030/94‑1 (MQ=60)
                       CGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTT                                                                        <  SRR4302545.1033069/94‑1 (MQ=60)
                       CGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTT                                                                        <  SRR4302545.4436538/94‑1 (MQ=60)
                       CGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTT                                                                        <  SRR4302545.5322676/94‑1 (MQ=60)
                       CGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTT                                                                        >  SRR4302545.3319868/1‑94 (MQ=60)
                        GTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTC                                                                       <  SRR4302545.10413118/94‑1 (MQ=60)
                        GTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTC                                                                       >  SRR4302545.3226776/1‑94 (MQ=60)
                        GTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTC                                                                       >  SRR4302545.6121617/1‑94 (MQ=60)
                        GTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTC                                                                       >  SRR4302545.6121618/1‑94 (MQ=60)
                        CTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTC                                                                       <  SRR4302545.3626802/94‑1 (MQ=60)
                         TTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCG                                                                      <  SRR4302545.1745983/94‑1 (MQ=60)
                         TTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCG                                                                      <  SRR4302545.54317/94‑1 (MQ=60)
                          TCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGC                                                                     <  SRR4302545.6696737/94‑1 (MQ=60)
                          TCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGC                                                                     <  SRR4302545.9181606/94‑1 (MQ=60)
                          TCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGC                                                                     <  SRR4302545.1362054/94‑1 (MQ=60)
                           CGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCG                                                                    <  SRR4302545.8463813/94‑1 (MQ=60)
                           CGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCG                                                                    >  SRR4302545.9406503/1‑94 (MQ=60)
                           CGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCG                                                                    >  SRR4302545.9031279/1‑94 (MQ=60)
                           CGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCG                                                                    <  SRR4302545.7260894/94‑1 (MQ=60)
                            GACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGA                                                                   >  SRR4302545.1972116/1‑94 (MQ=60)
                             ACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGAT                                                                  >  SRR4302545.211057/1‑94 (MQ=60)
                             ACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGAT                                                                  >  SRR4302545.6243241/1‑94 (MQ=60)
                             ACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGAT                                                                  >  SRR4302545.10278984/1‑94 (MQ=60)
                              CCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATA                                                                 >  SRR4302545.5560548/1‑94 (MQ=60)
                              CCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATA                                                                 >  SRR4302545.3423891/1‑94 (MQ=60)
                              CCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATA                                                                 >  SRR4302545.4955864/1‑94 (MQ=60)
                              CCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATA                                                                 >  SRR4302545.4046074/1‑94 (MQ=60)
                              CCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATA                                                                 >  SRR4302545.5560546/1‑94 (MQ=60)
                               CTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAA                                                                >  SRR4302545.5189335/1‑94 (MQ=60)
                               CTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAA                                                                >  SRR4302545.4026285/1‑94 (MQ=60)
                               CTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAA                                                                <  SRR4302545.3326429/94‑1 (MQ=60)
                               CTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAA                                                                <  SRR4302545.7670972/94‑1 (MQ=60)
                               CTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAA                                                                >  SRR4302545.245808/1‑94 (MQ=60)
                                TGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAA                                                               <  SRR4302545.546320/94‑1 (MQ=60)
                                GGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCGCGAAACTTTTCGCGATAAA                                                               <  SRR4302545.784526/94‑1 (MQ=60)
                                 GCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAG                                                              <  SRR4302545.3788160/94‑1 (MQ=60)
                                 GCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAG                                                              <  SRR4302545.4764719/94‑1 (MQ=60)
                                 GCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAG                                                              >  SRR4302545.2280830/1‑94 (MQ=60)
                                 GCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAG                                                              <  SRR4302545.1059962/94‑1 (MQ=60)
                                 GCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAG                                                              <  SRR4302545.4004406/94‑1 (MQ=60)
                                  CGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTGCGGTGAAGCGAGCTGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGA                                                             >  SRR4302545.10497862/1‑94 (MQ=60)
                                   GCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAT                                                            >  SRR4302545.9207662/1‑94 (MQ=60)
                                   GCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAT                                                            <  SRR4302545.9127306/94‑1 (MQ=60)
                                   GCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAT                                                            <  SRR4302545.1422086/94‑1 (MQ=60)
                                   GCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAT                                                            >  SRR4302545.6947712/1‑94 (MQ=60)
                                    CTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATA                                                           >  SRR4302545.10129036/1‑94 (MQ=60)
                                    CTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATA                                                           >  SRR4302545.5403494/1‑94 (MQ=60)
                                    CTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATA                                                           >  SRR4302545.9458353/1‑94 (MQ=60)
                                     TTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATAC                                                          >  SRR4302545.3351936/1‑94 (MQ=60)
                                     TTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATAC                                                          >  SRR4302545.596127/1‑94 (MQ=60)
                                     CTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATAC                                                          <  SRR4302545.2779835/94‑1 (MQ=60)
                                      TCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACT                                                         <  SRR4302545.10412201/94‑1 (MQ=60)
                                      TCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACT                                                         <  SRR4302545.7651804/94‑1 (MQ=60)
                                       CGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTG                                                        <  SRR4302545.10033011/94‑1 (MQ=60)
                                        GCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGG                                                       >  SRR4302545.10759280/1‑94 (MQ=60)
                                        GCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGG                                                       <  SRR4302545.7376295/94‑1 (MQ=60)
                                        GCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGG                                                       <  SRR4302545.820415/94‑1 (MQ=60)
                                         CTTAAATCTTTTGGCAAACTCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGA                                                      <  SRR4302545.4078124/94‑1 (MQ=60)
                                         CTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGA                                                      >  SRR4302545.2998071/1‑94 (MQ=60)
                                          TTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAA                                                     <  SRR4302545.6794511/94‑1 (MQ=60)
                                          TTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTATCGCGATAAAGATACTGGAA                                                     <  SRR4302545.6794826/94‑1 (MQ=60)
                                           TAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAAC                                                    <  SRR4302545.9606890/94‑1 (MQ=60)
                                           TAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAAA                                                    >  SRR4302545.8228080/1‑94 (MQ=60)
                                           TAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAAA                                                    >  SRR4302545.1983147/1‑94 (MQ=60)
                                           TAAATCTTTTGGCAAACGCGGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAAC                                                    <  SRR4302545.7798321/94‑1 (MQ=60)
                                            AAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACA                                                   <  SRR4302545.7675364/94‑1 (MQ=60)
                                             AATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGCGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAA                                                  >  SRR4302545.1649618/1‑94 (MQ=60)
                                             AATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAA                                                  >  SRR4302545.8714152/1‑94 (MQ=60)
                                              ATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAGCTTTTCGCGATAAAGATACTGGAACAAT                                                 <  SRR4302545.442779/94‑1 (MQ=60)
                                              ATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAAT                                                 >  SRR4302545.674242/1‑94 (MQ=60)
                                              ATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAAT                                                 >  SRR4302545.5353125/1‑94 (MQ=60)
                                               TCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATC                                                <  SRR4302545.1611517/94‑1 (MQ=60)
                                                CTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCG                                               <  SRR4302545.391404/94‑1 (MQ=60)
                                                 TTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGACCAATCGG                                              <  SRR4302545.10730272/94‑1 (MQ=60)
                                                  TTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGC                                             >  SRR4302545.5515405/1‑94 (MQ=60)
                                                   TTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCG                                            <  SRR4302545.812275/94‑1 (MQ=60)
                                                   TTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCG                                            <  SRR4302545.6017618/94‑1 (MQ=60)
                                                    TGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGC                                           <  SRR4302545.2005338/94‑1 (MQ=60)
                                                    TGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGC                                           >  SRR4302545.3635161/1‑94 (MQ=60)
                                                     GGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCA                                          <  SRR4302545.7205301/94‑1 (MQ=60)
                                                       CAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACT                                        >  SRR4302545.3228602/1‑94 (MQ=60)
                                                        AAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTG                                       <  SRR4302545.1593316/94‑1 (MQ=60)
                                                        AAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTG                                       >  SRR4302545.9810777/1‑94 (MQ=60)
                                                        AAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTG                                       >  SRR4302545.3611942/1‑94 (MQ=60)
                                                        AAACGCTGGGGAAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTG                                       <  SRR4302545.1593315/94‑1 (MQ=60)
                                                          ACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCA                                     <  SRR4302545.8425261/94‑1 (MQ=60)
                                                          ACGCTGGGGCAATTTCGGTGAACCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCA                                     <  SRR4302545.4518856/94‑1 (MQ=60)
                                                           CGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCAC                                    <  SRR4302545.4320728/94‑1 (MQ=60)
                                                           CGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCAC                                    >  SRR4302545.945035/1‑94 (MQ=60)
                                                           CGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCAC                                    >  SRR4302545.8049007/1‑94 (MQ=60)
                                                            GCTGGGGCAATTTCGGTGAAGCGAGATGCGCTCCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACT                                   <  SRR4302545.3999773/94‑1 (MQ=60)
                                                            GCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACT                                   >  SRR4302545.10036623/1‑94 (MQ=60)
                                                             CTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTC                                  >  SRR4302545.10064708/1‑94 (MQ=60)
                                                             CTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTC                                  >  SRR4302545.4133366/1‑94 (MQ=60)
                                                              TGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCA                                 >  SRR4302545.1842577/1‑94 (MQ=60)
                                                              TGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCA                                 <  SRR4302545.7422927/94‑1 (MQ=60)
                                                              TGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCA                                 >  SRR4302545.10085000/1‑94 (MQ=60)
                                                               GGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAG                                >  SRR4302545.4254283/1‑94 (MQ=60)
                                                               GGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGCCGCACTGCACTCAC                                >  SRR4302545.9180589/1‑94 (MQ=60)
                                                                GGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGC                               <  SRR4302545.3289808/94‑1 (MQ=60)
                                                                GGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGC                               >  SRR4302545.5430055/1‑94 (MQ=60)
                                                                GGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGC                               <  SRR4302545.550313/94‑1 (MQ=60)
                                                                GGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTGCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGC                               <  SRR4302545.4772254/94‑1 (MQ=60)
                                                                 GGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCA                              >  SRR4302545.8508880/1‑94 (MQ=60)
                                                                 GGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCA                              >  SRR4302545.8508879/1‑94 (MQ=60)
                                                                 GGCAATTGCGGTGAAGCGAGATGCGCACTGGGATAGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCA                              <  SRR4302545.10248262/94‑1 (MQ=60)
                                                                  GCAATTGCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAA                             <  SRR4302545.5844435/94‑1 (MQ=60)
                                                                     ATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACG                          <  SRR4302545.7968093/94‑1 (MQ=60)
                                                                      TTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTAACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGC                         >  SRR4302545.4977558/1‑94 (MQ=60)
                                                                         CGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCT                      >  SRR4302545.7781712/1‑94 (MQ=60)
                                                                         CGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCT                      >  SRR4302545.352505/1‑94 (MQ=60)
                                                                         CGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCT                      <  SRR4302545.1241541/94‑1 (MQ=60)
                                                                         CGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCT                      <  SRR4302545.6883410/94‑1 (MQ=60)
                                                                           GTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGA                    >  SRR4302545.449058/1‑94 (MQ=60)
                                                                           GTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGA                    <  SRR4302545.5907673/94‑1 (MQ=60)
                                                                            TGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAG                   >  SRR4302545.4075349/1‑94 (MQ=60)
                                                                             GAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGC                  >  SRR4302545.7899885/1‑94 (MQ=60)
                                                                               AGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTG                >  SRR4302545.3384226/1‑94 (MQ=60)
                                                                               AGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTG                >  SRR4302545.8584785/1‑94 (MQ=60)
                                                                                GCGAGATGCGCACTGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGG               <  SRR4302545.10532733/94‑1 (MQ=60)
                                                                                GCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGG               <  SRR4302545.8051065/94‑1 (MQ=60)
                                                                                GCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGG               <  SRR4302545.922930/94‑1 (MQ=60)
                                                                                 CGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGT              >  SRR4302545.6021036/1‑94 (MQ=60)
                                                                                 CGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGT              <  SRR4302545.3025898/94‑1 (MQ=60)
                                                                                 CGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGT              <  SRR4302545.8348571/94‑1 (MQ=60)
                                                                                 CGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGT              <  SRR4302545.5726504/94‑1 (MQ=60)
                                                                                 CGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGT              <  SRR4302545.10169927/94‑1 (MQ=60)
                                                                                  GAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTG             <  SRR4302545.1749094/94‑1 (MQ=60)
                                                                                  GAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTG             >  SRR4302545.5651115/1‑94 (MQ=60)
                                                                                  GAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTG             <  SRR4302545.8011279/94‑1 (MQ=60)
                                                                                   AGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGG            <  SRR4302545.2931026/94‑1 (MQ=60)
                                                                                   AGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGG            <  SRR4302545.7063996/94‑1 (MQ=60)
                                                                                      TGCGCACCGGGATCGTCTTCACGAACCTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTT         <  SRR4302545.5695897/94‑1 (MQ=60)
                                                                                        CGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGCGCTGGCGGCTTTA       >  SRR4302545.9035553/1‑94 (MQ=60)
                                                                                        CGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTA       >  SRR4302545.9918366/1‑94 (MQ=60)
                                                                                        CGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTA       >  SRR4302545.2104663/1‑94 (MQ=60)
                                                                                        CGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTA       >  SRR4302545.9035559/1‑94 (MQ=60)
                                                                                        CGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTA       <  SRR4302545.2822129/94‑1 (MQ=60)
                                                                                        CGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTA       <  SRR4302545.8947784/94‑1 (MQ=60)
                                                                                        CGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTA       <  SRR4302545.6767847/94‑1 (MQ=60)
                                                                                         GCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTAT      >  SRR4302545.1841218/1‑94 (MQ=60)
                                                                                          CACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATA     <  SRR4302545.7425755/94‑1 (MQ=60)
                                                                                          CACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATA     >  SRR4302545.6893794/1‑94 (MQ=60)
                                                                                           ACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATAC    >  SRR4302545.2252779/1‑94 (MQ=60)
                                                                                           ACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATAC    <  SRR4302545.9270663/94‑1 (MQ=60)
                                                                                           ACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATAC    <  SRR4302545.8379682/94‑1 (MQ=60)
                                                                                           ACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATAC    >  SRR4302545.5380461/1‑94 (MQ=60)
                                                                                           ACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACCCGCTGAGCTGGTGGCTTTATAC    >  SRR4302545.8899032/1‑94 (MQ=60)
                                                                                             CGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGCACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCC  <  SRR4302545.9674097/94‑1 (MQ=60)
                                                                                             CGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCC  <  SRR4302545.7923267/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCC  >  NC_000913/3037382‑3037568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: