Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,037,475 |
T→C |
S97G (AGT→GGT) |
xerD ← |
XerD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,037,475 | 0 | T | C | 99.6%
| 884.1
/ ‑4.6
| 257 | S97G (AGT→GGT) | xerD | XerD |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (126/130); total (127/130) |
| Fisher's exact test for biased strand distribution p-value = 4.94e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.11e-01 |
Only 100 of 268 total aligned reads displayed.
ATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTAT > NC_000913/3037384‑3037564
|
aTTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTg > 2:5577997/1‑93 (MQ=255)
ttAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCgg < 2:3613034/93‑1 (MQ=255)
ttAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCgg > 2:373561/1‑93 (MQ=255)
ttAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCgg > 1:170881/1‑93 (MQ=255)
aaTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGa < 2:5721750/93‑1 (MQ=255)
aTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAt < 2:4211518/93‑1 (MQ=255)
aTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAt < 1:4784475/93‑1 (MQ=255)
aTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAt < 2:4352322/93‑1 (MQ=255)
aTGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAt > 2:1332784/1‑93 (MQ=255)
tGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATc < 2:2368789/93‑1 (MQ=255)
ggTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCCCCGGGATCg > 2:4565152/1‑93 (MQ=255)
gTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGt < 2:1973888/93‑1 (MQ=255)
tGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTc < 1:577811/93‑1 (MQ=255)
ccTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCtt < 1:699745/93‑1 (MQ=255)
cTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTc > 1:102713/1‑93 (MQ=255)
cTGTAATAAACGTTCGACCTGAGCTTCGCTTACATCTTTTGCCAAACGCTGGGCCAATTTCAGTGTAACGAGATGTGCAACGGGCTCGTATTc > 2:638791/1‑93 (MQ=255)
gTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCAc > 1:2121243/1‑93 (MQ=255)
ataaACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGaa > 1:1743395/1‑93 (MQ=255)
ataaACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGaa > 1:1338719/1‑93 (MQ=255)
ataaACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGaa > 2:5789766/1‑93 (MQ=255)
taaACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGaaa < 1:6446199/93‑1 (MQ=255)
aaaCGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAAc > 1:598774/1‑93 (MQ=255)
aaCGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACt > 2:4274960/1‑93 (MQ=255)
aCGTTCGACCTGCGCTTCGCTTAAATCTTGTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACtt < 2:6343067/93‑1 (MQ=255)
gTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACtttt > 1:1055326/1‑93 (MQ=255)
cgtCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACtttt < 2:1045374/91‑1 (MQ=255)
ttCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTc < 2:2881646/93‑1 (MQ=255)
ttCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTc > 1:3302733/1‑93 (MQ=255)
cGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTcgc < 1:6193236/93‑1 (MQ=255)
aCCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGa < 2:2272779/93‑1 (MQ=255)
ccTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGAt > 1:4487257/1‑93 (MQ=255)
ccTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGAt > 2:5520203/1‑93 (MQ=255)
cTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATa > 2:4539447/1‑93 (MQ=255)
tGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATaa > 1:367029/1‑93 (MQ=255)
tGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATaa < 1:1590153/93‑1 (MQ=255)
tGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATaa > 2:3027381/1‑93 (MQ=255)
tGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATaa < 1:2609821/93‑1 (MQ=255)
gcttcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCTCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGa < 1:5021413/93‑1 (MQ=255)
gcttcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCGCCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGa < 1:2397315/93‑1 (MQ=255)
gcttcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGa < 1:4944578/93‑1 (MQ=255)
cctccgcttAAATCTTTTGGCAAACGCTGGTGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGa < 2:1271310/89‑1 (MQ=255)
cttcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAt > 1:505879/1‑93 (MQ=255)
ttcgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATa < 1:2220703/93‑1 (MQ=255)
gcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACTAAACTTTTCGCGATAAAGATACTg < 1:375949/93‑1 (MQ=255)
gcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTg < 2:2712280/93‑1 (MQ=255)
cttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTgg < 1:3783952/93‑1 (MQ=255)
ttAAATCTTTTGGCAAACTCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGa > 1:5415976/1‑93 (MQ=255)
ttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGa > 2:5237797/1‑93 (MQ=255)
ttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGa < 1:3378678/93‑1 (MQ=255)
tAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCTGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGaa > 2:115061/1‑93 (MQ=255)
aaaTCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAAc > 2:5934947/1‑93 (MQ=255)
aaaTCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAAc > 1:4270712/1‑93 (MQ=255)
aTCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACaa < 2:790176/93‑1 (MQ=255)
cTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATc < 2:5643328/93‑1 (MQ=255)
ggCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGgcgc < 1:1982318/93‑1 (MQ=255)
gCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgca < 2:3978414/93‑1 (MQ=255)
gCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgca < 1:5847804/93‑1 (MQ=255)
cAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcac < 1:2467865/93‑1 (MQ=255)
aaaCGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcact < 1:3488130/93‑1 (MQ=255)
aaCGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactg > 1:3133951/1‑93 (MQ=255)
aaCGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactg > 1:257832/1‑93 (MQ=255)
aCGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactgc > 1:1494493/1‑93 (MQ=255)
gCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactggac > 1:432873/1‑93 (MQ=255)
gCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactgcac > 2:6185286/1‑93 (MQ=255)
cTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactgcact > 2:2202853/1‑93 (MQ=255)
cTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactgcact > 2:4648002/1‑93 (MQ=255)
cTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCgcactgcact > 1:5556583/1‑93 (MQ=255)
ggtgCAATTTCGGTGAGGCGAGATGCGCACCGGGATCGTCGTCACGAAACTTTTCGCGATAAAGATAGTGGAACAATCGGCGCACTGCACTCa < 2:1724118/90‑1 (MQ=255)
ggCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGc > 2:87241/1‑93 (MQ=255)
ggCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGc > 1:6410705/1‑93 (MQ=255)
gCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCa > 2:3194568/1‑93 (MQ=255)
gCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCa < 1:410374/93‑1 (MQ=255)
cAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCaa > 1:3940621/1‑93 (MQ=255)
aaTTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCaaa > 2:1026346/1‑93 (MQ=255)
aTTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAc > 1:2867629/1‑93 (MQ=255)
aTTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAc > 1:6404710/1‑93 (MQ=255)
aTTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAc > 2:2579568/1‑93 (MQ=255)
ttCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAcgc < 1:1212832/93‑1 (MQ=255)
ttCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAcgc < 2:4134465/93‑1 (MQ=255)
cGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACgcgc > 1:6037470/1‑93 (MQ=255)
ggTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCt > 1:4386156/1‑93 (MQ=255)
ggTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGAGCACTGCACTCAGCAAACGCGCt > 1:594873/1‑93 (MQ=255)
gTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTg > 2:2134234/1‑93 (MQ=255)
gTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTg > 1:2959353/1‑93 (MQ=255)
gAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAg > 2:3567721/1‑93 (MQ=255)
gAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACAGAAACAATCGCCGCACTGCACTCAGTCAACGCGCTGAg > 2:1401235/1‑93 (MQ=255)
aaGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGc < 2:2847415/93‑1 (MQ=255)
aaGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGc < 1:2337290/93‑1 (MQ=255)
aGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCt > 2:5556045/1‑93 (MQ=255)
gCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCtg < 1:5225588/93‑1 (MQ=255)
gagaTGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCtggt > 2:4801746/1‑93 (MQ=255)
agaTGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCtggtg > 2:5056899/1‑93 (MQ=255)
agaTGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCtggtg > 2:390895/1‑93 (MQ=255)
gtGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAAGAATCGGCGCACTGCACTCAGCAACCGCGCTGAGCTGGTGGc < 2:3882002/92‑1 (MQ=255)
aTGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGc < 2:5880057/93‑1 (MQ=255)
tGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCt < 1:274939/93‑1 (MQ=255)
gcgcACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCtt > 2:4908286/1‑93 (MQ=255)
gcACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTta < 2:511863/93‑1 (MQ=255)
cACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTtat < 2:544751/93‑1 (MQ=255)
cACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTtat > 1:1956442/1‑93 (MQ=255)
|
ATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTAT > NC_000913/3037384‑3037564
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCC > NC_000913/3037382‑3037568
|
CGATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACC > SRR4302537.138521/1‑94 (MQ=60)
GATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCG > SRR4302537.6315045/1‑94 (MQ=60)
ATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGG > SRR4302537.3097348/1‑94 (MQ=60)
ATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGG > SRR4302537.3200295/1‑94 (MQ=60)
ATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGG > SRR4302537.172099/1‑94 (MQ=60)
ATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGG > SRR4302537.1310150/1‑94 (MQ=60)
ATTAATGGTGCCTGTAANAAACGTTCGACCTGCGCTTCGCTTAAATCTNTTGGCAAACGCTGGGGCAATTNNGGNGAAGCGAGATNGNCACNGG > SRR4302537.5250330/1‑94 (MQ=60)
ATTAATGGCGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTTGCAAACGCTGGGGCAATTTCGGTGAAGCGACATGCGCACCGG > SRR4302537.1076774/1‑94 (MQ=60)
TTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGG < SRR4302537.4826016/94‑1 (MQ=60)
TAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGA < SRR4302537.923382/94‑1 (MQ=60)
AATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAT < SRR4302537.3727060/94‑1 (MQ=60)
AATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAT > SRR4302537.1547260/1‑94 (MQ=60)
AATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAT < SRR4302537.1612463/94‑1 (MQ=60)
AATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGAT < SRR4302537.6066006/94‑1 (MQ=60)
ATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATC < SRR4302537.4817494/94‑1 (MQ=60)
TGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCG > SRR4302537.3331783/1‑94 (MQ=60)
TGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCG < SRR4302537.4334802/94‑1 (MQ=60)
GTGCCTGTAATAAACGTTCGACCTGCCCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTC < SRR4302537.1944477/94‑1 (MQ=60)
TGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCT < SRR4302537.581768/94‑1 (MQ=60)
TGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCT < SRR4302537.193051/94‑1 (MQ=60)
TGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCT < SRR4302537.5075366/94‑1 (MQ=60)
CCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTC > SRR4302537.103453/1‑94 (MQ=60)
CCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTC < SRR4302537.704531/94‑1 (MQ=60)
CCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTC > SRR4302537.5826099/1‑94 (MQ=60)
TGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCAC > SRR4302537.2136170/1‑94 (MQ=60)
TGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCAAGATGCGCACCGGGATCGTCTTCAC < SRR4302537.68847/94‑1 (MQ=60)
TAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGA > SRR4302537.1732015/1‑94 (MQ=60)
AATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAA > SRR4302537.1348043/1‑94 (MQ=60)
AATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAA > SRR4302537.5950302/1‑94 (MQ=60)
AATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAA > SRR4302537.1755548/1‑94 (MQ=60)
ATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAA < SRR4302537.1378787/94‑1 (MQ=60)
TAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAAC > SRR4302537.602869/1‑94 (MQ=60)
TAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAAC < SRR4302537.6489928/94‑1 (MQ=60)
AAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACT > SRR4302537.2151470/1‑94 (MQ=60)
CGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTT < SRR4302537.439418/94‑1 (MQ=60)
CGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTT > SRR4302537.1062606/1‑94 (MQ=60)
CGTTCGACCTGCGCTTCGCTTAAATCTTTGGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTT < SRR4302537.1297642/94‑1 (MQ=60)
GTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTC > SRR4302537.2323319/1‑94 (MQ=60)
GTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTC > SRR4302537.3326081/1‑94 (MQ=60)
TTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCG < SRR4302537.1561773/94‑1 (MQ=60)
CGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCG < SRR4302537.473393/94‑1 (MQ=60)
CGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCG < SRR4302537.6235907/94‑1 (MQ=60)
CGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCG < SRR4302537.380446/94‑1 (MQ=60)
ACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGAT > SRR4302537.4518298/1‑94 (MQ=60)
CCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATA > SRR4302537.2620810/1‑94 (MQ=60)
CTGCGCTTCGCTTAAATCTTTTGGCGAACGCTCGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGCCTTCACGAAACTTTTCGCGATAA > SRR4302537.2125634/1‑94 (MQ=60)
CTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAA > SRR4302537.369576/1‑94 (MQ=60)
CTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAA < SRR4302537.6291116/94‑1 (MQ=60)
TGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAA < SRR4302537.2628076/94‑1 (MQ=60)
TGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAA < SRR4302537.1681400/94‑1 (MQ=60)
TGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAA < SRR4302537.1601271/94‑1 (MQ=60)
GCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAG < SRR4302537.6455399/94‑1 (MQ=60)
GCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCTCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAT < SRR4302537.5055997/94‑1 (MQ=60)
GCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCGCCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAT < SRR4302537.2414198/94‑1 (MQ=60)
GCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGCAACTTTTCGCGATAAAGAT > SRR4302537.6335892/1‑94 (MQ=60)
GCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAT < SRR4302537.5550114/94‑1 (MQ=60)
GCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAT > SRR4302537.509352/1‑94 (MQ=60)
GCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAT < SRR4302537.4978675/94‑1 (MQ=60)
GCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAT < SRR4302537.483956/94‑1 (MQ=60)
GCTTCGCTTAAATCTTTGGGCAAACGCGGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGAT < SRR4302537.1211021/94‑1 (MQ=60)
CTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATA < SRR4302537.5054392/94‑1 (MQ=60)
CTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATA > SRR4302537.4165900/1‑94 (MQ=60)
TTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATAC < SRR4302537.5183682/94‑1 (MQ=60)
TTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATAC < SRR4302537.2236352/94‑1 (MQ=60)
TTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATAC < SRR4302537.3190726/94‑1 (MQ=60)
TCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACT < SRR4302537.5560384/94‑1 (MQ=60)
CGCTTAAATCTTTTGGCACACGCTGGTGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTG < SRR4302537.5087470/94‑1 (MQ=60)
CGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTG < SRR4302537.1980608/94‑1 (MQ=60)
CGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTG > SRR4302537.3040837/1‑94 (MQ=60)
CGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTG < SRR4302537.2289106/94‑1 (MQ=60)
GCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACTAAACTTTTCGCGATAAAGATACTGG < SRR4302537.378559/94‑1 (MQ=60)
GCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGG > SRR4302537.2398434/1‑94 (MQ=60)
CTTAAATCTTTTGGCAAACTCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGA > SRR4302537.5452902/1‑94 (MQ=60)
CTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGA < SRR4302537.3810519/94‑1 (MQ=60)
TTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAA < SRR4302537.6098410/94‑1 (MQ=60)
TTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAA < SRR4302537.3402621/94‑1 (MQ=60)
TAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAAC > SRR4302537.4300385/1‑94 (MQ=60)
TAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAAC > SRR4302537.4323579/1‑94 (MQ=60)
ATCTTTTGGCAAACGCTGGTGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAAT < SRR4302537.829747/94‑1 (MQ=60)
ATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAAT > SRR4302537.3454464/1‑94 (MQ=60)
acnnnnngnanncncnnggnnnannTCNGTNANGCGAGANGCNCACCGGGATCCTCNTNACGAAACNTNTNNCGATAAAGATACTGGAACAATC < SRR4302537.1122046/69‑1 (MQ=37)
TCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATC < SRR4302537.1043740/94‑1 (MQ=60)
CTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCG < SRR4302537.2227203/94‑1 (MQ=60)
TTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGG < SRR4302537.1981312/94‑1 (MQ=60)
TTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGG < SRR4302537.6449277/94‑1 (MQ=60)
GGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCA < SRR4302537.1996091/94‑1 (MQ=60)
GCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCAC < SRR4302537.5887901/94‑1 (MQ=60)
CAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACT < SRR4302537.2485214/94‑1 (MQ=60)
CAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACT < SRR4302537.3836312/94‑1 (MQ=60)
AAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTG > SRR4302537.259659/1‑94 (MQ=60)
AAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTG < SRR4302537.3512800/94‑1 (MQ=60)
AAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTG > SRR4302537.3155944/1‑94 (MQ=60)
AACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGC > SRR4302537.1504906/1‑94 (MQ=60)
CGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGGAC > SRR4302537.435889/1‑94 (MQ=60)
GCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACT < SRR4302537.2820511/94‑1 (MQ=60)
GCTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACT > SRR4302537.5594549/1‑94 (MQ=60)
CTGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTC < SRR4302537.6018485/94‑1 (MQ=60)
TGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCA < SRR4302537.2947173/94‑1 (MQ=60)
TGGGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCA < SRR4302537.345430/94‑1 (MQ=60)
GGGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGC > SRR4302537.6454322/1‑94 (MQ=60)
GGCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCA < SRR4302537.3854319/94‑1 (MQ=60)
GCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAA < SRR4302537.413214/94‑1 (MQ=60)
GCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAA > SRR4302537.3968170/1‑94 (MQ=60)
GCAATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAA > SRR4302537.679434/1‑94 (MQ=60)
AATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAC > SRR4302537.2887755/1‑94 (MQ=60)
AATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAC > SRR4302537.6448301/1‑94 (MQ=60)
AATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAC > SRR4302537.3532092/1‑94 (MQ=60)
AATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAC < SRR4302537.5334249/94‑1 (MQ=60)
AATTTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAC > SRR4302537.4758270/1‑94 (MQ=60)
AATTTCGCTGAAGCGAGATGCGCACCGGGATCGGCTTCACGAATCTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAAC < SRR4302537.2439004/94‑1 (MQ=60)
TTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCG > SRR4302537.4398119/1‑94 (MQ=60)
TTCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCG < SRR4302537.1221270/94‑1 (MQ=60)
TCGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGC > SRR4302537.6078948/1‑94 (MQ=60)
CGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCT > SRR4302537.4416419/1‑94 (MQ=60)
CGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCT > SRR4302537.2661934/1‑94 (MQ=60)
CGGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGAGCACTGCACTCAGCAAACGCGCT > SRR4302537.598943/1‑94 (MQ=60)
GGTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTG > SRR4302537.2980116/1‑94 (MQ=60)
GTGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGA > SRR4302537.6138020/1‑94 (MQ=60)
TGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAG < SRR4302537.2591764/94‑1 (MQ=60)
TGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAG < SRR4302537.2530881/94‑1 (MQ=60)
TGAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAG < SRR4302537.2779631/94‑1 (MQ=60)
GAAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGCTAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGC > SRR4302537.4501086/1‑94 (MQ=60)
AAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCT > SRR4302537.6025587/1‑94 (MQ=60)
AAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCT < SRR4302537.2353771/94‑1 (MQ=60)
AAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCT > SRR4302537.5598534/1‑94 (MQ=60)
AAGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCT > SRR4302537.2731630/1‑94 (MQ=60)
AGCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTG < SRR4302537.5117740/94‑1 (MQ=60)
GCGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGG < SRR4302537.5261523/94‑1 (MQ=60)
CGAGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGT < SRR4302537.5944727/94‑1 (MQ=60)
AGATGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGG > SRR4302537.4108469/1‑94 (MQ=60)
TGCGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTT < SRR4302537.276868/94‑1 (MQ=60)
CGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGGACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTA > SRR4302537.2452850/1‑94 (MQ=60)
CGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTA > SRR4302537.4007223/1‑94 (MQ=60)
CGCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTA > SRR4302537.648239/1‑94 (MQ=60)
GCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTAT < SRR4302537.376148/94‑1 (MQ=60)
GCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTAT < SRR4302537.364812/94‑1 (MQ=60)
GCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTAT > SRR4302537.1970055/1‑94 (MQ=60)
GCACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACCGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTAT < SRR4302537.5676172/94‑1 (MQ=60)
CACCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATA > SRR4302537.5521221/1‑94 (MQ=60)
CCGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACC < SRR4302537.3349327/94‑1 (MQ=60)
CGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCC > SRR4302537.5594550/1‑94 (MQ=60)
CGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCC < SRR4302537.5519719/94‑1 (MQ=60)
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CGATTAATGGTGCCTGTAATAAACGTTCGACCTGCGCTTCGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTGGGATCGTCTTCACGAAACTTTTCGCGATAAAGATACTGGAACAATCGGCGCACTGCACTCAGCAAACGCGCTGAGCTGGTGGCTTTATACCC > NC_000913/3037382‑3037568
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
