Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,103,519 +T intergenic (‑268/‑530) cpxR ← / → yiiP transcriptional regulator in 2‑component system/putative transport system permease protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,103,5191.T99.8% 2232.5 / ‑3.8 577intergenic (‑268/‑530)cpxR/yiiPtranscriptional regulator in 2‑component system/putative transport system permease protein
Reads supporting (aligned to +/- strand):  ref base . (0/1);  new base T (259/317);  total (259/318)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 688 total aligned reads displayed.

TGGCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑G‑ACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAA  >  NC_000913/4103426‑4103606
                                                                                               |                                                                                       
tGGCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgca‑g                                                                                          <  1:5217872/94‑1 (MQ=255)
 ggCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgca‑gt                                                                                         >  1:963523/1‑93 (MQ=255)
 ggCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgca‑gt                                                                                         >  1:3667792/1‑93 (MQ=255)
  gCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgca‑gta                                                                                        >  2:3613575/1‑92 (MQ=255)
  gCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgca‑gta                                                                                        >  2:9209258/1‑92 (MQ=255)
   ccTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTAcgcagcgca‑gtac                                                                                       >  1:10306562/1‑91 (MQ=255)
       aaCGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCgca‑gtacgcag                                                                                   >  2:3863166/1‑94 (MQ=255)
       aaCGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCgca‑gtacgcag                                                                                   >  2:7407207/1‑94 (MQ=255)
             ggCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTGCGCAGAGCCat                                                                             <  1:5080335/94‑1 (MQ=255)
             ggCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCat                                                                             >  2:8330520/1‑94 (MQ=255)
             ggCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCat                                                                             <  1:7459220/94‑1 (MQ=255)
              gCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCata                                                                            >  2:6302244/1‑94 (MQ=255)
               cagtcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCatat                                                                           <  1:5595836/94‑1 (MQ=255)
                agtcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATg                                                                          >  1:3317372/1‑94 (MQ=255)
                agtcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATg                                                                          >  1:7150092/1‑94 (MQ=255)
                  tcagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGtt                                                                        >  2:2914878/1‑94 (MQ=255)
                   cagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTc                                                                       >  2:4832156/1‑94 (MQ=255)
                   cagtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTc                                                                       >  1:2023043/1‑94 (MQ=255)
                    agtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCg                                                                      <  2:6026649/94‑1 (MQ=255)
                     gtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGa                                                                     <  1:6941875/94‑1 (MQ=255)
                     gtTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGa                                                                     <  2:1397634/94‑1 (MQ=255)
                       tCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACg                                                                   <  2:7609710/94‑1 (MQ=255)
                       tCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACg                                                                   <  2:9639458/94‑1 (MQ=255)
                        cATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACgg                                                                  <  2:5770300/94‑1 (MQ=255)
                        cATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACgg                                                                  >  2:6777611/1‑94 (MQ=255)
                         aTTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGc                                                                 >  1:7735059/1‑94 (MQ=255)
                          ttAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCa                                                                <  2:5455377/94‑1 (MQ=255)
                            aaGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATa                                                              >  2:238515/1‑94 (MQ=255)
                            aaGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATa                                                              >  2:9737570/1‑94 (MQ=255)
                              gCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAg                                                            <  2:4717530/94‑1 (MQ=255)
                              gCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAg                                                            >  1:4301138/1‑94 (MQ=255)
                              gCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAg                                                            >  2:5066043/1‑94 (MQ=255)
                                 aCGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGACGAGCTTACGCAGCGCA‑GTACGCAGAGCCATACGTTCGACGGCATAAGttt                                                         >  2:9544575/1‑94 (MQ=255)
                                 aCGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGttt                                                         >  1:9756357/1‑94 (MQ=255)
                                    ctgctgAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAAc                                                      >  1:8316056/1‑94 (MQ=255)
                                    ctgctgAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAAc                                                      <  1:9054132/94‑1 (MQ=255)
                                      gctgAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCg                                                    <  2:1857432/94‑1 (MQ=255)
                                       ctgAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGa                                                   <  1:8910810/94‑1 (MQ=255)
                                       ctgAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGa                                                   >  1:6563995/1‑94 (MQ=255)
                                        tgAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGaa                                                  >  2:8206039/1‑94 (MQ=255)
                                          aaGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACa                                                >  2:3316154/1‑94 (MQ=255)
                                          aaGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACa                                                <  2:10546560/94‑1 (MQ=255)
                                           aGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACAt                                               >  1:4538642/1‑94 (MQ=255)
                                             tCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCa                                             <  1:5836316/94‑1 (MQ=255)
                                             tCGGCTCAGGCGATAACTGGCCTCCGGGTGAAGAACTTACGCAGCGCA‑GTCCGCAGAGCCATATGTTCGACGGCATAAGTTCAACCGAACATCa                                             >  1:10501442/1‑94 (MQ=255)
                                              cGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAg                                            >  2:4095335/1‑94 (MQ=255)
                                              cGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAg                                            <  2:2082057/94‑1 (MQ=255)
                                               ggTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGc                                           >  1:4948150/1‑94 (MQ=255)
                                               ggTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGc                                           <  2:1168687/94‑1 (MQ=255)
                                               ggTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGc                                           <  1:1001225/94‑1 (MQ=255)
                                                gTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCg                                          >  2:8496229/1‑94 (MQ=255)
                                                gTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCg                                          >  2:728772/1‑94 (MQ=255)
                                                 ttCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGt                                         <  1:8626093/94‑1 (MQ=255)
                                                 ttCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGt                                         >  1:1577028/1‑94 (MQ=255)
                                                  tCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTc                                        <  2:1740054/94‑1 (MQ=255)
                                                  tCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTc                                        <  1:9987630/94‑1 (MQ=255)
                                                  tCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAAAATCAGCGTc                                        >  2:6620319/1‑94 (MQ=255)
                                                   cAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTca                                       <  1:2135795/94‑1 (MQ=255)
                                                     ggCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagc                                     <  1:4042357/94‑1 (MQ=255)
                                                     ggCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagc                                     <  1:6805707/94‑1 (MQ=255)
                                                      gCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagca                                    <  2:984424/94‑1 (MQ=255)
                                                      gCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagca                                    <  1:2542746/94‑1 (MQ=255)
                                                      gCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagca                                    <  1:605048/94‑1 (MQ=255)
                                                       cGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTcagcag                                   >  1:6196252/1‑94 (MQ=255)
                                                         aTAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGAt                                 <  1:7983716/94‑1 (MQ=255)
                                                          tAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATg                                >  2:6506487/1‑94 (MQ=255)
                                                           aaCTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGc                               <  1:1189156/94‑1 (MQ=255)
                                                           aaCTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGc                               >  1:9473094/1‑94 (MQ=255)
                                                              tGGCATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCgag                            >  1:7877232/1‑94 (MQ=255)
                                                                 cATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATc                         <  1:8532120/94‑1 (MQ=255)
                                                                 cATCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATc                         >  1:4751171/1‑94 (MQ=255)
                                                                  aTCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCt                        <  2:3162821/94‑1 (MQ=255)
                                                                   tCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCtt                       >  2:2793710/1‑94 (MQ=255)
                                                                   tCCGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCtt                       >  1:2776184/1‑94 (MQ=255)
                                                                     cGGGTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTAt                     <  1:10607385/94‑1 (MQ=255)
                                                                      ggttGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATg                    <  1:5699266/91‑1 (MQ=255)
                                                                      gggTGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATg                    <  2:9316011/94‑1 (MQ=255)
                                                                         tGAAGAACTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCaa                 <  2:5183257/94‑1 (MQ=255)
                                                                           aagaaCTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACa               <  2:5859146/94‑1 (MQ=255)
                                                                           aagaaCTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACa               <  2:10262332/94‑1 (MQ=255)
                                                                           aagaaCTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACa               <  1:3468935/94‑1 (MQ=255)
                                                                            agaaCTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAg              <  1:9835976/94‑1 (MQ=255)
                                                                            agaaCTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAg              >  2:6974814/1‑94 (MQ=255)
                                                                            agaaCTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAg              <  1:7381534/94‑1 (MQ=255)
                                                                             gaaCTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAgg             <  1:3803529/94‑1 (MQ=255)
                                                                              aaCTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGc            <  2:8714913/94‑1 (MQ=255)
                                                                                cTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGccc          <  1:1823501/94‑1 (MQ=255)
                                                                                cTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGccc          <  2:7829004/94‑1 (MQ=255)
                                                                                cTTACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGccc          >  1:2887159/1‑94 (MQ=255)
                                                                                 ttACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCg         <  1:10130761/94‑1 (MQ=255)
                                                                                 ttACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCg         >  1:6600233/1‑94 (MQ=255)
                                                                                 ttACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACACCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCg         <  1:8139407/94‑1 (MQ=255)
                                                                                  tACGCAGCGCA‑GTACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCgg        <  1:6392112/94‑1 (MQ=255)
                                                                                   aCGCAGCGCA‑GTACGCAGAGCCATATGTTGGACGGCATAAGTTTAACCGAACATCAGAGTCAGAAACTGCGAGATCTTATGCAACAGGCACgca       >  2:8115766/1‑92 (MQ=255)
                                                                                      cagcgca‑gtACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACg    <  2:4304109/94‑1 (MQ=255)
                                                                                      cagcgca‑gtACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACg    >  2:8989111/1‑94 (MQ=255)
                                                                                       agcgca‑gtACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGa   >  1:2259989/1‑94 (MQ=255)
                                                                                       agcgca‑gtACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGa   >  2:2524697/1‑94 (MQ=255)
                                                                                        gcgcagG‑ACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGaa  <  2:8610366/94‑1 (MQ=255)
                                                                                        gcgca‑gtACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGaa  <  1:5417447/94‑1 (MQ=255)
                                                                                               |                                                                                       
TGGCCTCAACGCTGGCAGTCAGTTCATTAAGCCACGCTGCTGAAGTCGGTTCAGGCGATAACTGGCATCCGGGTGAAGAACTTACGCAGCGCA‑G‑ACGCAGAGCCATATGTTCGACGGCATAAGTTTAACCGAACATCAGCGTCAGCAGATGCGAGATCTTATGCAACAGGCCCGGCACGAA  >  NC_000913/4103426‑4103606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 324 total aligned reads displayed.
CGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGTGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGACGCGT  >  NC_000913/4111729‑4111915
                                                                                             |                                                                                             
CGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGC                                                                                               >  SRR4302545.2883944/1‑94 (MQ=60)
 GTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCG                                                                                              >  SRR4302545.1463332/1‑94 (MQ=60)
 GTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCG                                                                                              >  SRR4302545.1421498/1‑94 (MQ=60)
 GTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCG                                                                                              >  SRR4302545.3148525/1‑94 (MQ=60)
 GTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCG                                                                                              >  SRR4302545.3933275/1‑94 (MQ=60)
  TTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGG                                                                                             <  SRR4302545.5782014/94‑1 (MQ=60)
     CGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCT                                                                                          >  SRR4302545.10145341/1‑94 (MQ=60)
      GCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTT                                                                                         <  SRR4302545.9242019/94‑1 (MQ=60)
       CAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTA                                                                                        >  SRR4302545.4720671/1‑94 (MQ=60)
        AGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGTGGGCTTAA                                                                                       >  SRR4302545.5405670/1‑94 (MQ=60)
        AGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAA                                                                                       >  SRR4302545.1369566/1‑94 (MQ=60)
        AGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAA                                                                                       <  SRR4302545.9492510/94‑1 (MQ=60)
        AGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAA                                                                                       <  SRR4302545.2171530/94‑1 (MQ=60)
         GTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAAT                                                                                      >  SRR4302545.6242450/1‑94 (MQ=60)
           GCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTT                                                                                    >  SRR4302545.5932777/1‑94 (MQ=60)
           GCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTT                                                                                    >  SRR4302545.8862698/1‑94 (MQ=60)
           GCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTT                                                                                    <  SRR4302545.5237535/94‑1 (MQ=60)
            TGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTG                                                                                   >  SRR4302545.9034756/1‑94 (MQ=60)
            CGGCATTTCATCGAGCACAAAGATGCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTG                                                                                   <  SRR4302545.5960975/94‑1 (MQ=60)
            CGGCACTTCATCGAGCACAAAGATTCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTG                                                                                   <  SRR4302545.5960974/94‑1 (MQ=60)
            CGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTG                                                                                   >  SRR4302545.1186551/1‑94 (MQ=60)
             GGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGC                                                                                  <  SRR4302545.9023277/94‑1 (MQ=60)
              GCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCC                                                                                 <  SRR4302545.4230848/94‑1 (MQ=60)
               CACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCA                                                                                <  SRR4302545.8462789/94‑1 (MQ=60)
               CACTTCATCGAGCACAAAAAACCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCA                                                                                <  SRR4302545.2340758/94‑1 (MQ=60)
                CCTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCAT                                                                               <  SRR4302545.8343708/94‑1 (MQ=60)
                ACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCAT                                                                               >  SRR4302545.9834372/1‑94 (MQ=60)
                ACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCAT                                                                               >  SRR4302545.8031387/1‑94 (MQ=60)
                ACTTCATCGAGCACAAAGAATCCTGCAGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCAT                                                                               <  SRR4302545.9665706/94‑1 (MQ=60)
                ACTTCATCAAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCAT                                                                               <  SRR4302545.6153902/94‑1 (MQ=60)
                ACTACATCAAGCACAAAGAAACCAACCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCAT                                                                               <  SRR4302545.8266680/94‑1 (MQ=60)
                 CTTGATCGAGCACAAAAAATCCTGGCGCTCCGCTAACAGCCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGTGGGCTTAATTTGCCATC                                                                              <  SRR4302545.5217187/94‑1 (MQ=60)
                 CTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATC                                                                              >  SRR4302545.96582/1‑94 (MQ=60)
                  TTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGTGGGCTTAATTTGCCATCG                                                                             <  SRR4302545.7605966/94‑1 (MQ=60)
                  TTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCG                                                                             <  SRR4302545.1561607/94‑1 (MQ=60)
                  TTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCG                                                                             >  SRR4302545.9346656/1‑94 (MQ=60)
                  TTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATAG                                                                             >  SRR4302545.8353205/1‑94 (MQ=60)
                   TCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGG                                                                            >  SRR4302545.8102749/1‑94 (MQ=60)
                   TAATCGAGAACAAAGACTCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGG                                                                            <  SRR4302545.5975747/94‑1 (MQ=60)
                     ATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGG                                                                          >  SRR4302545.5291373/1‑94 (MQ=60)
                     ATCAAGCACAAAGAATCCTGCCGATTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGG                                                                          <  SRR4302545.6077585/94‑1 (MQ=60)
                        GAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCACCGGGGACG                                                                       <  SRR4302545.10600494/94‑1 (MQ=60)
                         AGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGG                                                                      <  SRR4302545.4616991/94‑1 (MQ=60)
                         AGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGG                                                                      <  SRR4302545.9442059/94‑1 (MQ=60)
                         AGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGG                                                                      <  SRR4302545.4069389/94‑1 (MQ=60)
                         AGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGG                                                                      >  SRR4302545.9120272/1‑94 (MQ=60)
                          GCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGT                                                                     <  SRR4302545.6945994/94‑1 (MQ=60)
                           CACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTG                                                                    >  SRR4302545.2820539/1‑94 (MQ=60)
                           CACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTG                                                                    >  SRR4302545.1627104/1‑94 (MQ=60)
                            ACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGA                                                                   <  SRR4302545.6934276/94‑1 (MQ=60)
                            ACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGA                                                                   >  SRR4302545.342747/1‑94 (MQ=60)
                             CAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGAC                                                                  >  SRR4302545.3077795/1‑94 (MQ=60)
                             CAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGAC                                                                  >  SRR4302545.10807434/1‑94 (MQ=60)
                             CAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGAC                                                                  >  SRR4302545.4782196/1‑94 (MQ=60)
                             CAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGAAGGTGAC                                                                  >  SRR4302545.1328346/1‑94 (MQ=60)
                              AAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGCCC                                                                 >  SRR4302545.1547808/1‑94 (MQ=60)
                              AAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACC                                                                 >  SRR4302545.1547807/1‑94 (MQ=60)
                               AAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGgccgttccca                                                                >  SRR4302545.6972590/1‑84 (MQ=60)
                               AAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCA                                                                >  SRR4302545.2407390/1‑94 (MQ=60)
                               AAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCA                                                                >  SRR4302545.5851888/1‑94 (MQ=60)
                                AGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAG                                                               <  SRR4302545.8813313/94‑1 (MQ=60)
                                AGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAG                                                               >  SRR4302545.5935956/1‑94 (MQ=60)
                                AGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAG                                                               <  SRR4302545.5033108/94‑1 (MQ=60)
                                 GAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGG                                                              <  SRR4302545.1193343/94‑1 (MQ=60)
                                 GAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGG                                                              <  SRR4302545.8618421/94‑1 (MQ=60)
                                  AATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGT                                                             >  SRR4302545.10485967/1‑94 (MQ=60)
                                  AATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGT                                                             >  SRR4302545.6418897/1‑94 (MQ=60)
                                   ATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTA                                                            <  SRR4302545.4838008/94‑1 (MQ=60)
                                   ATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTA                                                            >  SRR4302545.1204669/1‑94 (MQ=60)
                                    TCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAA                                                           >  SRR4302545.2300949/1‑94 (MQ=60)
                                    ACCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAA                                                           <  SRR4302545.10432713/94‑1 (MQ=60)
                                     CCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAA                                                          >  SRR4302545.10115803/1‑94 (MQ=60)
                                      CTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAA                                                         >  SRR4302545.3485815/1‑94 (MQ=60)
                                      CTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAA                                                         >  SRR4302545.54477/1‑94 (MQ=60)
                                      CTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAA                                                         <  SRR4302545.8709988/94‑1 (MQ=60)
                                      CTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAA                                                         <  SRR4302545.8709990/94‑1 (MQ=60)
                                      CTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAA                                                         >  SRR4302545.8739828/1‑94 (MQ=60)
                                       TGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAAC                                                        <  SRR4302545.7955729/94‑1 (MQ=60)
                                       TGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAAC                                                        <  SRR4302545.6291296/94‑1 (MQ=60)
                                        GCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACT                                                       >  SRR4302545.8851654/1‑94 (MQ=60)
                                          CGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCC                                                     >  SRR4302545.2670738/1‑94 (MQ=60)
                                           GCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCACTCGCGGGCTTAATTTGCCATCGGGGACGGTGggcaggtaaacatccg                                                    >  SRR4302545.6330117/1‑78 (MQ=60)
                                            CTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAG                                                   <  SRR4302545.3612432/94‑1 (MQ=60)
                                            CTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAG                                                   <  SRR4302545.3514332/94‑1 (MQ=60)
                                            CTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAG                                                   >  SRR4302545.7625973/1‑94 (MQ=60)
                                             TTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGA                                                  >  SRR4302545.3784510/1‑94 (MQ=60)
                                              TCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGAT                                                 <  SRR4302545.8213519/94‑1 (MQ=60)
                                              TCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGAT                                                 >  SRR4302545.6084030/1‑94 (MQ=60)
                                              TCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGAT                                                 <  SRR4302545.5643196/94‑1 (MQ=60)
                                                GCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCG                                               <  SRR4302545.2357546/94‑1 (MQ=60)
                                                GCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCG                                               >  SRR4302545.2221400/1‑94 (MQ=60)
                                                 CTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGG                                              >  SRR4302545.1952138/1‑94 (MQ=60)
                                                 CTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGG                                              >  SRR4302545.3760586/1‑94 (MQ=60)
                                                  TACCCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGG                                             <  SRR4302545.733038/94‑1 (MQ=60)
                                                  TAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGG                                             <  SRR4302545.6671415/94‑1 (MQ=60)
                                                  TAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGG                                             >  SRR4302545.10155564/1‑94 (MQ=60)
                                                  TAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGG                                             >  SRR4302545.4648048/1‑94 (MQ=60)
                                                  TAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGG                                             >  SRR4302545.1057963/1‑94 (MQ=60)
                                                  TAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGG                                             <  SRR4302545.640500/94‑1 (MQ=60)
                                                   AACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGA                                            >  SRR4302545.465041/1‑94 (MQ=60)
                                                    ACCACCTGCACTTCATCGCCTGGTTGCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGAT                                           <  SRR4302545.8603617/94‑1 (MQ=60)
                                                     CCCCCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATT                                          <  SRR4302545.2696619/94‑1 (MQ=60)
                                                     CCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATT                                          >  SRR4302545.5027462/1‑94 (MQ=60)
                                                     CCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATT                                          >  SRR4302545.7267220/1‑94 (MQ=60)
                                                     CCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATT                                          >  SRR4302545.6368271/1‑94 (MQ=60)
                                                     CCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATT                                          <  SRR4302545.10670071/94‑1 (MQ=60)
                                                      CACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTA                                         >  SRR4302545.6554373/1‑94 (MQ=60)
                                                       CCCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTAT                                        <  SRR4302545.3096639/94‑1 (MQ=60)
                                                       CCCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTAT                                        <  SRR4302545.9604602/94‑1 (MQ=60)
                                                       ACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGGCGGTGACCAGGTAAAACTCCAGATCGGGATTAT                                        >  SRR4302545.140219/1‑94 (MQ=60)
                                                       ACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTAT                                        >  SRR4302545.2541025/1‑94 (MQ=60)
                                                       ACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTAT                                        >  SRR4302545.4963334/1‑94 (MQ=60)
                                                        CCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTATTTTGCCATCGtggccggggacaatgtaacactctagatcgggattgta                                       >  SRR4302545.703700/1‑56 (MQ=60)
                                                         CTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCG                                      >  SRR4302545.1989351/1‑94 (MQ=60)
                                                         CTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCG                                      >  SRR4302545.2951776/1‑94 (MQ=60)
                                                          TGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGG                                     <  SRR4302545.5010208/94‑1 (MQ=60)
                                                          TGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGG                                     >  SRR4302545.5430215/1‑94 (MQ=60)
                                                          TGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGG                                     <  SRR4302545.4978545/94‑1 (MQ=60)
                                                          TGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGG                                     <  SRR4302545.4645137/94‑1 (MQ=60)
                                                           GCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGG                                    >  SRR4302545.6274480/1‑94 (MQ=60)
                                                           GCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGG                                    <  SRR4302545.6214105/94‑1 (MQ=60)
                                                           GCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGG                                    <  SRR4302545.8605166/94‑1 (MQ=60)
                                                            CACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGC                                   >  SRR4302545.3743928/1‑94 (MQ=60)
                                                            CACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGC                                   <  SRR4302545.8101555/94‑1 (MQ=60)
                                                            CACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGC                                   >  SRR4302545.343192/1‑94 (MQ=60)
                                                             ACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCG                                  >  SRR4302545.384116/1‑94 (MQ=60)
                                                             ACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCG                                  <  SRR4302545.5686942/94‑1 (MQ=60)
                                                             ACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGGGACCAGGTAAAACTCCAGATCGGGATTttcggtca                                  >  SRR4302545.2556931/1‑86 (MQ=60)
                                                              CTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGA                                 <  SRR4302545.998810/94‑1 (MQ=60)
                                                              CTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGA                                 >  SRR4302545.8126713/1‑94 (MQ=60)
                                                              CTTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGA                                 >  SRR4302545.4538690/1‑94 (MQ=60)
                                                               TTCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAG                                >  SRR4302545.4567712/1‑94 (MQ=60)
                                                                TCATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGT                               >  SRR4302545.3510022/1‑94 (MQ=60)
                                                                 CATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTT                              <  SRR4302545.6085510/94‑1 (MQ=60)
                                                                 CATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTT                              <  SRR4302545.552510/94‑1 (MQ=60)
                                                                  ATCTCCGGGTTTCAGTGCCGCTAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTT                             <  SRR4302545.4271337/94‑1 (MQ=60)
                                                                  ATCGCCTGGTTTCAGTGCCGCCAGTCGTGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTT                             <  SRR4302545.10465215/94‑1 (MQ=60)
                                                                  ATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTT                             >  SRR4302545.7655108/1‑94 (MQ=60)
                                                                  ATCGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTT                             >  SRR4302545.5244702/1‑94 (MQ=60)
                                                                    CGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTAC                           >  SRR4302545.297826/1‑94 (MQ=60)
                                                                    CGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTAC                           <  SRR4302545.10750991/94‑1 (MQ=60)
                                                                    CGCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTAC                           >  SRR4302545.342129/1‑94 (MQ=60)
                                                                     GCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACA                          >  SRR4302545.7424507/1‑94 (MQ=60)
                                                                     GCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACA                          >  SRR4302545.2166721/1‑94 (MQ=60)
                                                                     GCCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACA                          >  SRR4302545.5244421/1‑94 (MQ=60)
                                                                      CCTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACAT                         >  SRR4302545.3199193/1‑94 (MQ=60)
                                                                       CTGGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATA                        >  SRR4302545.7720463/1‑94 (MQ=60)
                                                                         GGTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGG                      >  SRR4302545.2604210/1‑94 (MQ=60)
                                                                          GTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACGTAGGA                     <  SRR4302545.5482791/94‑1 (MQ=60)
                                                                          GTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGA                     <  SRR4302545.3303270/94‑1 (MQ=60)
                                                                          GTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGA                     >  SRR4302545.7386204/1‑94 (MQ=60)
                                                                          GTTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGA                     >  SRR4302545.4351092/1‑94 (MQ=60)
                                                                           TTTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGTGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAG                    <  SRR4302545.5543705/94‑1 (MQ=60)
                                                                            TTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGT                   >  SRR4302545.5597380/1‑94 (MQ=60)
                                                                            TTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGT                   >  SRR4302545.4030417/1‑94 (MQ=60)
                                                                            TTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGT                   <  SRR4302545.4465196/94‑1 (MQ=60)
                                                                            TTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGT                   >  SRR4302545.1137021/1‑94 (MQ=60)
                                                                            TTCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGT                   <  SRR4302545.9893509/94‑1 (MQ=60)
                                                                            TTCAGTGCCGCCAGTCGCGGGCGTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGTGCGAGTTTACATAGGAGT                   >  SRR4302545.10709135/1‑94 (MQ=60)
                                                                             TCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTA                  >  SRR4302545.2419127/1‑94 (MQ=60)
                                                                             TCAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTA                  <  SRR4302545.7230647/94‑1 (MQ=60)
                                                                              CAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCTGGCGGGTTTACATTGGAGTAG                 >  SRR4302545.8714661/1‑94 (MQ=60)
                                                                              CAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAG                 >  SRR4302545.1097341/1‑94 (MQ=60)
                                                                              CAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAG                 >  SRR4302545.6803459/1‑94 (MQ=60)
                                                                              CAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAG                 <  SRR4302545.790506/94‑1 (MQ=60)
                                                                              CAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACACCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAG                 <  SRR4302545.5751388/94‑1 (MQ=60)
                                                                              CAGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACAAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAG                 >  SRR4302545.1088134/1‑94 (MQ=60)
                                                                               AGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGG                <  SRR4302545.7504245/94‑1 (MQ=60)
                                                                               AGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGG                >  SRR4302545.2079603/1‑94 (MQ=60)
                                                                               AGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGG                >  SRR4302545.9907271/1‑94 (MQ=60)
                                                                               AGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGG                <  SRR4302545.2183519/94‑1 (MQ=60)
                                                                               AGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGG                <  SRR4302545.4754329/94‑1 (MQ=60)
                                                                               AGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGG                <  SRR4302545.7568449/94‑1 (MQ=60)
                                                                               AGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGG                >  SRR4302545.3664458/1‑94 (MQ=60)
                                                                               AGTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGG                <  SRR4302545.9561371/94‑1 (MQ=60)
                                                                                GTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGC               >  SRR4302545.9481490/1‑94 (MQ=60)
                                                                                GTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGC               <  SRR4302545.6618541/94‑1 (MQ=60)
                                                                                GTGCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGC               >  SRR4302545.495293/1‑94 (MQ=60)
                                                                                ATGCCGCCAGGCGCGGGCTTAATTTGCCATCGGGGGCGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGC               <  SRR4302545.3564249/94‑1 (MQ=60)
                                                                                  GCCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGC             >  SRR4302545.2457021/1‑94 (MQ=60)
                                                                                   CCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCG            <  SRR4302545.8526336/94‑1 (MQ=60)
                                                                                   CCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCG            <  SRR4302545.10279233/94‑1 (MQ=60)
                                                                                   CCGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCG            <  SRR4302545.83017/94‑1 (MQ=60)
                                                                                    CGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGC           >  SRR4302545.1844543/1‑94 (MQ=60)
                                                                                    CGCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGC           <  SRR4302545.3465058/94‑1 (MQ=60)
                                                                                     GCCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCT          <  SRR4302545.60789/94‑1 (MQ=60)
                                                                                      CCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTG         >  SRR4302545.8841748/1‑94 (MQ=60)
                                                                                      CCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTG         <  SRR4302545.2451496/94‑1 (MQ=60)
                                                                                      CCAGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTG         <  SRR4302545.3021394/94‑1 (MQ=60)
                                                                                        AGTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGA       >  SRR4302545.10304200/1‑94 (MQ=60)
                                                                                         GTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGAC      <  SRR4302545.5144665/94‑1 (MQ=60)
                                                                                         GTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGAC      <  SRR4302545.5144664/94‑1 (MQ=60)
                                                                                         GTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGAC      <  SRR4302545.4043736/94‑1 (MQ=60)
                                                                                         GTCGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGAC      >  SRR4302545.2679175/1‑94 (MQ=60)
                                                                                         GTCGCGGCCTTAATTTGCCAACGTGGACGGTGACCAGGTAAAACTCCAGATCGGCATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGAC      <  SRR4302545.1010484/94‑1 (MQ=60)
                                                                                           CGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGACGC    >  SRR4302545.7664054/1‑94 (MQ=60)
                                                                                           CGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGACGC    >  SRR4302545.7474746/1‑94 (MQ=60)
                                                                                           CGCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGACGC    >  SRR4302545.2157018/1‑94 (MQ=60)
                                                                                            GCGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGACGCG   <  SRR4302545.419940/94‑1 (MQ=60)
                                                                                             CGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGACGCGT  <  SRR4302545.3255516/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGTTTCGCAGTGCGGCACTTCATCGAGCACAAAGAATCCTGCCGCTTCGCTAACCACCTGCACTTCATCGCCTGGTTTCAGTGCCGCCAGTCGTGGGCTTAATTTGCCATCGGGGACGGTGACCAGGTAAAACTCCAGATCGGGATTATCGGGCGAGTTTACATAGGAGTAGGCGCGCTGGACGCGT  >  NC_000913/4111729‑4111915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑