Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,172,702 A→G intergenic (‑97/+90) coaA ← / ← b3975 pantothenate kinase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,172,7020AG99.3% 2003.3 / ‑2.4 578intergenic (‑97/+90)coaA/b3975pantothenate kinase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (1/3);  new base G (248/326);  total (249/329)
Fisher's exact test for biased strand distribution p-value = 6.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 595 total aligned reads displayed.

TGTTTCTGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACACCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGATAAAAAGAAT  >  NC_000913/4172611‑4172792
                                                                                            |                                                                                          
tGTTTCTGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGcc                                                                                          >  1:3260418/1‑94 (MQ=255)
tGTTTCTGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGcc                                                                                          <  2:10150502/94‑1 (MQ=255)
  tttCTGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAg                                                                                        <  2:3521441/94‑1 (MQ=255)
   ttCTGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGa                                                                                       <  2:4833605/94‑1 (MQ=255)
    tCTGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGGAACGCCAGag                                                                                      >  1:6680129/1‑93 (MQ=255)
     cTGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATg                                                                                     >  1:4709341/1‑94 (MQ=255)
     cTGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATg                                                                                     <  2:7153901/94‑1 (MQ=255)
      tGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATgg                                                                                    <  2:861780/94‑1 (MQ=255)
      tGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATgg                                                                                    <  2:6970037/94‑1 (MQ=255)
      tGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATgg                                                                                    >  1:6947339/1‑94 (MQ=255)
      tGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATgg                                                                                    <  1:2767868/94‑1 (MQ=255)
      tGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATgg                                                                                    <  2:744705/94‑1 (MQ=255)
       ggCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATggg                                                                                   <  1:2441066/94‑1 (MQ=255)
        gCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATgggg                                                                                  <  2:9492486/94‑1 (MQ=255)
        gCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATgggg                                                                                  >  2:7608276/1‑94 (MQ=255)
          ggTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGggag                                                                                <  2:3862030/94‑1 (MQ=255)
            tCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGggagga                                                                              <  2:8020128/94‑1 (MQ=255)
            tCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGggagga                                                                              <  1:8924003/94‑1 (MQ=255)
             cATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGaa                                                                             <  2:3275714/94‑1 (MQ=255)
             cATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGaa                                                                             >  1:1258844/1‑94 (MQ=255)
              aTAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGaat                                                                            <  1:5694992/94‑1 (MQ=255)
              aTAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGGAACGCCAGATGGGGAGGaat                                                                            >  1:7545197/1‑94 (MQ=255)
                 gCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGaataat                                                                         <  1:4447348/94‑1 (MQ=255)
                   tctATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAAtaataa                                                                       <  2:9024671/94‑1 (MQ=255)
                   tctATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAAtaataa                                                                       <  1:4816463/94‑1 (MQ=255)
                   tctATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAAtaataa                                                                       >  1:6069259/1‑94 (MQ=255)
                     tATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGa                                                                     <  1:7725758/94‑1 (MQ=255)
                     tATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGa                                                                     <  1:10049419/94‑1 (MQ=255)
                       tCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGaaa                                                                   <  2:8824217/94‑1 (MQ=255)
                        cGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGaaaa                                                                  <  2:6228329/94‑1 (MQ=255)
                        cGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGaaaa                                                                  <  1:3439179/94‑1 (MQ=255)
                        cGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGaaaa                                                                  <  1:209267/94‑1 (MQ=255)
                          gCAAAGCGATATTTGCCATGGCTGCTCACAGTTCTTGTTGATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGaaaaaa                                                                <  2:5459726/94‑1 (MQ=255)
                          gCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCCGATGGGGAGGAATAATAAGaaaaaa                                                                >  2:2872640/1‑94 (MQ=255)
                          gCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGaaaaaa                                                                <  2:596508/94‑1 (MQ=255)
                             aaGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAAtct                                                             >  1:4996333/1‑94 (MQ=255)
                              aGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACACCAGATGGGGAGGAATAATAAGAAAAAAtctc                                                            >  2:5176019/1‑94 (MQ=255)
                               gCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATctct                                                           >  1:707775/1‑94 (MQ=255)
                               gCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATctct                                                           >  1:9617124/1‑94 (MQ=255)
                               gCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATctct                                                           >  1:3983272/1‑94 (MQ=255)
                                cGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTg                                                          >  2:8277179/1‑94 (MQ=255)
                                  atctttGCCATGGCGCGTCACAGGTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGcc                                                        <  1:7253951/91‑1 (MQ=255)
                                  atatTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGcc                                                        >  1:3075846/1‑94 (MQ=255)
                                  atatTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGca                                                        >  1:6843431/1‑93 (MQ=255)
                                     tttGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAgg                                                     <  2:3719544/94‑1 (MQ=255)
                                       tGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGaa                                                   >  2:9798447/1‑94 (MQ=255)
                                         ccATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGc                                                 >  1:10242799/1‑94 (MQ=255)
                                             ggCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATc                                             <  2:340617/94‑1 (MQ=255)
                                              gcgcGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCg                                            >  2:7294739/1‑94 (MQ=255)
                                                gcgTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGtt                                          >  1:10553627/1‑94 (MQ=255)
                                                 cgTCCCAGTTCTTGTGAAAGGGTTAAAGGGGCGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTg                                         <  1:9374146/94‑1 (MQ=255)
                                                 cgTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTg                                         >  1:257994/1‑94 (MQ=255)
                                                 cgTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTg                                         <  1:829813/94‑1 (MQ=255)
                                                 cgTCACAGTTCTGTGGAATGGGTTAATGGGCAGGAGGCTAACGCCAGATGGGGAGAAATAATAAGAAAAAATATCTGCCAGGAAGCTATCGTTg                                         <  2:9313719/94‑1 (MQ=255)
                                                  gTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGa                                        >  2:2723074/1‑94 (MQ=255)
                                                   tCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGaa                                       <  2:1264305/94‑1 (MQ=255)
                                                   tCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGaa                                       >  2:1520187/1‑94 (MQ=255)
                                                   tCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGaa                                       <  2:1590167/94‑1 (MQ=255)
                                                     acaGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGaaaa                                     <  1:9049255/94‑1 (MQ=255)
                                                      caGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAg                                    <  2:5386633/94‑1 (MQ=255)
                                                      caGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAg                                    >  1:5095534/1‑94 (MQ=255)
                                                      caGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAg                                    <  2:4987908/94‑1 (MQ=255)
                                                      caGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAg                                    >  2:4647104/1‑94 (MQ=255)
                                                      caGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAg                                    <  2:1782713/94‑1 (MQ=255)
                                                      caGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAg                                    <  2:3083642/94‑1 (MQ=255)
                                                        gTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCa                                  >  1:5378722/1‑94 (MQ=255)
                                                        gTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCa                                  <  2:685421/94‑1 (MQ=255)
                                                          tCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAAt                                <  1:3894218/94‑1 (MQ=255)
                                                          tCTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAAt                                <  1:4532777/94‑1 (MQ=255)
                                                           cTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAAtg                               >  1:8489784/1‑94 (MQ=255)
                                                           cTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAAtg                               >  1:8776448/1‑94 (MQ=255)
                                                           cTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAAtg                               >  1:1506291/1‑94 (MQ=255)
                                                           cTGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAAtg                               <  1:1625149/94‑1 (MQ=255)
                                                             tGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAAtgt                              >  2:10569024/1‑94 (MQ=255)
                                                             tGTTGAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAAtgt                              <  2:8392482/94‑1 (MQ=255)
                                                                 gAATGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACa                          <  2:1097816/94‑1 (MQ=255)
                                                                  aaTGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAg                         <  1:4353196/94‑1 (MQ=255)
                                                                  aaTGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAg                         <  2:4531792/94‑1 (MQ=255)
                                                                   aTGGGTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGa                        <  1:2251070/94‑1 (MQ=255)
                                                                     gggTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGata                      >  2:2181749/1‑94 (MQ=255)
                                                                     gggTTAATGGGCAGGAGAGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGata                      <  1:6207825/94‑1 (MQ=255)
                                                                      ggTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGatat                     <  1:3598818/94‑1 (MQ=255)
                                                                      ggTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGatac                     <  1:10422853/94‑2 (MQ=255)
                                                                       gTTAATGGGCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATAtt                    <  1:9865201/94‑1 (MQ=255)
                                                                             gggCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCt              <  2:6549039/94‑1 (MQ=255)
                                                                             gggCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCt              <  1:1906049/94‑1 (MQ=255)
                                                                              ggCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTg             <  2:4255761/94‑1 (MQ=255)
                                                                              ggCAGGAGGGGAACGCCAGATGGGGAGGAATAATAATAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTg             <  2:7891513/94‑1 (MQ=255)
                                                                               gCAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGa            <  2:6424572/94‑1 (MQ=255)
                                                                                cAGGAGGGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGAt           <  1:3374362/94‑1 (MQ=255)
                                                                                 aggaggGGAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAGTGTGACAGATATTCCATCTGATa          >  1:5803022/1‑94 (MQ=255)
                                                                                   gaggGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGATaaa        >  2:236832/1‑94 (MQ=255)
                                                                                   gaggGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGATaaa        <  2:5520745/94‑1 (MQ=255)
                                                                                    aggGTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGATaaaa       <  2:5681233/94‑1 (MQ=255)
                                                                                     tggTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGATaaaaa      <  2:9711370/93‑1 (MQ=255)
                                                                                      ggTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGATAAAAAg     <  2:4093633/94‑1 (MQ=255)
                                                                                      ggTAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGATAAAAAg     >  1:6491120/1‑94 (MQ=255)
                                                                                      ggTAACACCAGATGGGGAGTAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGATAAAAAg     <  2:10302060/94‑1 (MQ=255)
                                                                                        tAACGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGATAAAAAGaa   <  1:4175329/94‑1 (MQ=255)
                                                                                         aaCGCCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGATAAAAAGAAt  <  1:8033592/94‑1 (MQ=255)
                                                                                            |                                                                                          
TGTTTCTGGCGGTCATAGCTCTATCGGCAAAGCGATATTTGCCATGGCGCGTCACAGTTCTGTTGAATGGGTTAATGGGCAGGAGGGTAACACCAGATGGGGAGGAATAATAAGAAAAAATCTCTGCCAGGAAGCTATCGTTGAAAAGCAATGTGACAGATATTCCATCTGATAAAAAGAAT  >  NC_000913/4172611‑4172792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 300 total aligned reads displayed.
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  NC_000913/4175856‑4176042
                                                                                                |                                                                                              
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGG                                                                                                <  SRR4302545.7526558/94‑1 (MQ=60)
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGG                                                                                                >  SRR4302545.3582743/1‑94 (MQ=60)
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGG                                                                                                >  SRR4302545.7267538/1‑94 (MQ=60)
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGG                                                                                                <  SRR4302545.6849914/94‑1 (MQ=60)
 AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGG                                                                                              <  SRR4302545.10520292/94‑1 (MQ=60)
 AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGG                                                                                              <  SRR4302545.8073084/94‑1 (MQ=60)
 AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGG                                                                                              >  SRR4302545.4422336/1‑94 (MQ=60)
 AAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGG                                                                                              >  SRR4302545.10440199/1‑94 (MQ=60)
  AAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAATGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGCC                                                                                             >  SRR4302545.6319560/1‑94 (MQ=60)
  AAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGC                                                                                             <  SRR4302545.6325916/94‑1 (MQ=60)
   ATAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCTTGTTGTTTTTATTGGCC                                                                                             >  SRR4302545.9684439/1‑94 (MQ=60)
   AAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGgcc                                                                                             <  SRR4302545.7384195/94‑4 (MQ=60)
   AAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGgcc                                                                                             >  SRR4302545.5137478/1‑91 (MQ=60)
   AAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGgcc                                                                                             >  SRR4302545.1803357/1‑91 (MQ=60)
    AAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCT                                                                                            <  SRR4302545.6012257/94‑1 (MQ=60)
    AAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCT                                                                                            <  SRR4302545.6395491/94‑1 (MQ=60)
     AGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTT                                                                                           <  SRR4302545.1450643/94‑1 (MQ=60)
     AGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTT                                                                                           <  SRR4302545.6457984/94‑1 (MQ=60)
      GCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTG                                                                                          <  SRR4302545.10024106/94‑1 (MQ=60)
       CCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGC                                                                                         <  SRR4302545.7812688/94‑1 (MQ=60)
       CCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGC                                                                                         >  SRR4302545.8305741/1‑94 (MQ=60)
       CCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGC                                                                                         >  SRR4302545.3314293/1‑94 (MQ=60)
        CTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCC                                                                                        >  SRR4302545.4014984/1‑94 (MQ=60)
         TAGCCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCC                                                                                       <  SRR4302545.10096551/94‑1 (MQ=60)
          AACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCG                                                                                      <  SRR4302545.8316745/94‑1 (MQ=60)
          AACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCG                                                                                      <  SRR4302545.7957762/94‑1 (MQ=60)
           ACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGT                                                                                     >  SRR4302545.7227592/1‑94 (MQ=60)
            CCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTA                                                                                    >  SRR4302545.8677233/1‑94 (MQ=60)
             CCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAA                                                                                   >  SRR4302545.330063/1‑94 (MQ=60)
             CCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAA                                                                                   >  SRR4302545.10170673/1‑94 (MQ=60)
             CCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAA                                                                                   >  SRR4302545.8022260/1‑94 (MQ=60)
              CAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAA                                                                                  >  SRR4302545.1807697/1‑94 (MQ=60)
               AGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAA                                                                                 <  SRR4302545.8189042/94‑1 (MQ=60)
               AGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAA                                                                                 <  SRR4302545.6500322/94‑1 (MQ=60)
                GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302545.1799164/94‑1 (MQ=60)
                GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302545.8831715/94‑1 (MQ=60)
                GCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAAC                                                                                <  SRR4302545.3972566/94‑1 (MQ=60)
                 CGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACG                                                                               >  SRR4302545.5013036/1‑94 (MQ=60)
                 CGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACG                                                                               <  SRR4302545.2868298/94‑1 (MQ=60)
                 CGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACG                                                                               >  SRR4302545.9488999/1‑94 (MQ=60)
                 CGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACG                                                                               >  SRR4302545.4509159/1‑94 (MQ=60)
                 CGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTCTATGGGCCTTGCCCGTAAAACG                                                                               >  SRR4302545.5013037/1‑94 (MQ=60)
                  GATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGA                                                                              >  SRR4302545.10081138/1‑94 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAT                                                                             >  SRR4302545.8020932/1‑94 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAT                                                                             >  SRR4302545.6523227/1‑94 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAT                                                                             >  SRR4302545.44237/1‑94 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAT                                                                             >  SRR4302545.8549683/1‑94 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAT                                                                             >  SRR4302545.3350586/1‑94 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAT                                                                             >  SRR4302545.9168162/1‑94 (MQ=60)
                   ATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGAT                                                                             >  SRR4302545.1597176/1‑94 (MQ=60)
                     CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTT                                                                           >  SRR4302545.6019112/1‑94 (MQ=60)
                     CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTT                                                                           >  SRR4302545.8186608/1‑94 (MQ=60)
                     CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTT                                                                           <  SRR4302545.8797883/94‑1 (MQ=60)
                     CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTT                                                                           <  SRR4302545.733205/94‑1 (MQ=60)
                     CAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTT                                                                           >  SRR4302545.7724215/1‑94 (MQ=60)
                      AAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTT                                                                          <  SRR4302545.279956/94‑1 (MQ=60)
                      AAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTT                                                                          <  SRR4302545.6184910/94‑1 (MQ=60)
                       AAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTT                                                                         <  SRR4302545.2439647/94‑1 (MQ=60)
                       AAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTT                                                                         <  SRR4302545.5525787/94‑1 (MQ=60)
                        AAAAGCGGCGATTTAATCGTTGCACAAGGTGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTT                                                                        <  SRR4302545.4454989/94‑1 (MQ=60)
                        AAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATATGCCTTGCACGTAAAACGATTTTTT                                                                        >  SRR4302545.2991987/1‑94 (MQ=60)
                         AAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTA                                                                       <  SRR4302545.690/94‑1 (MQ=60)
                         AAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTA                                                                       <  SRR4302545.4820875/94‑1 (MQ=60)
                          AAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTAT                                                                      >  SRR4302545.3575836/1‑94 (MQ=60)
                           AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATA                                                                     >  SRR4302545.6989042/1‑94 (MQ=60)
                           AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATA                                                                     <  SRR4302545.3293024/94‑1 (MQ=60)
                           AGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGTGCCTTGCCCGTAAAACGATTTTTTATA                                                                     >  SRR4302545.6989043/1‑94 (MQ=60)
                            GCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATAT                                                                    <  SRR4302545.1153554/94‑1 (MQ=60)
                            GCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATAT                                                                    <  SRR4302545.6284702/94‑1 (MQ=60)
                            GCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATAT                                                                    <  SRR4302545.1153553/94‑1 (MQ=60)
                             CGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTACAACGATTTTTTATATC                                                                   >  SRR4302545.10738626/1‑94 (MQ=60)
                              GGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCA                                                                  <  SRR4302545.1823205/94‑1 (MQ=60)
                              GGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCA                                                                  <  SRR4302545.6425327/94‑1 (MQ=60)
                               GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 <  SRR4302545.3246985/94‑1 (MQ=60)
                               GCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCAC                                                                 >  SRR4302545.6141641/1‑94 (MQ=60)
                                CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                >  SRR4302545.7004469/1‑94 (MQ=60)
                                CGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACG                                                                <  SRR4302545.8505548/94‑1 (MQ=60)
                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               >  SRR4302545.3614802/1‑94 (MQ=60)
                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               <  SRR4302545.3849532/94‑1 (MQ=60)
                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               >  SRR4302545.2650602/1‑94 (MQ=60)
                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               <  SRR4302545.1698409/94‑1 (MQ=60)
                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               >  SRR4302545.9063510/1‑94 (MQ=60)
                                 GATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGG                                                               <  SRR4302545.4591511/94‑1 (MQ=60)
                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCTCGGG                                                              <  SRR4302545.2606148/94‑1 (MQ=60)
                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              >  SRR4302545.1498059/1‑94 (MQ=60)
                                  ATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGG                                                              <  SRR4302545.2606147/94‑1 (MQ=60)
                                   TTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGG                                                             <  SRR4302545.9929803/94‑1 (MQ=60)
                                    TTAATCGTTGCACAAGGCGTGAGATTTGAATACAGTTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATTTCACTGGGA                                                            <  SRR4302545.7215854/94‑1 (MQ=60)
                                    TTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGA                                                            <  SRR4302545.7915164/94‑1 (MQ=60)
                                    TTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGA                                                            <  SRR4302545.10114860/94‑1 (MQ=60)
                                     TAATCGTTGCACAAGGCGTGAGATTGGAATTCAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAG                                                           <  SRR4302545.7533176/94‑1 (MQ=60)
                                     TAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAG                                                           >  SRR4302545.2320846/1‑94 (MQ=60)
                                      AATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGC                                                          >  SRR4302545.1690925/1‑94 (MQ=60)
                                       ATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAATACGATTTTTTATATCACGGGGAGCC                                                         >  SRR4302545.6754390/1‑94 (MQ=60)
                                        TCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCT                                                        <  SRR4302545.5071840/94‑1 (MQ=60)
                                        TCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCT                                                        >  SRR4302545.9617378/1‑94 (MQ=60)
                                         CGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTC                                                       <  SRR4302545.9497444/94‑1 (MQ=60)
                                         CGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTC                                                       >  SRR4302545.8579995/1‑94 (MQ=60)
                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      <  SRR4302545.1962031/94‑1 (MQ=60)
                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      <  SRR4302545.7652283/94‑1 (MQ=60)
                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      <  SRR4302545.312694/94‑1 (MQ=60)
                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      >  SRR4302545.734107/1‑94 (MQ=60)
                                          GTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCT                                                      <  SRR4302545.10315785/94‑1 (MQ=60)
                                            TGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCA                                                    >  SRR4302545.2090427/1‑94 (MQ=60)
                                            TGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCA                                                    <  SRR4302545.2380834/94‑1 (MQ=60)
                                            TGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCA                                                    <  SRR4302545.972399/94‑1 (MQ=60)
                                            TGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCA                                                    >  SRR4302545.2501398/1‑94 (MQ=60)
                                            TGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCA                                                    <  SRR4302545.1364561/94‑1 (MQ=60)
                                                CAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGG                                                >  SRR4302545.9046634/1‑94 (MQ=60)
                                                CAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGG                                                <  SRR4302545.8475134/94‑1 (MQ=60)
                                                CAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGG                                                >  SRR4302545.7737151/1‑94 (MQ=60)
                                                 AAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGC                                               <  SRR4302545.9970631/94‑1 (MQ=60)
                                                 AAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGC                                               >  SRR4302545.3488860/1‑94 (MQ=60)
                                                   GGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGT                                             <  SRR4302545.8923610/94‑1 (MQ=60)
                                                    GCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTT                                            <  SRR4302545.2471065/94‑1 (MQ=60)
                                                    GCGTGAGATTGGAATACAATTTCCCGCCTTTTGTTTTGATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTT                                            <  SRR4302545.6713340/94‑1 (MQ=60)
                                                    GCGTGAAATTGGAATACAATTTCCGCCCTTTTGTTTTTATGGGGCTTGCCCGGAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTT                                            <  SRR4302545.2285967/94‑1 (MQ=60)
                                                      GTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTAT                                          <  SRR4302545.4612923/94‑1 (MQ=60)
                                                       TGAGATTGTAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         <  SRR4302545.3548325/94‑1 (MQ=60)
                                                       TGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         <  SRR4302545.3548326/94‑1 (MQ=60)
                                                       TGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         <  SRR4302545.1549829/94‑1 (MQ=60)
                                                       TGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         <  SRR4302545.9758577/94‑1 (MQ=60)
                                                       TGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         <  SRR4302545.7983979/94‑1 (MQ=60)
                                                       GGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATT                                         <  SRR4302545.2789135/94‑1 (MQ=60)
                                                         AGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       >  SRR4302545.3012061/1‑94 (MQ=60)
                                                         AGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTAC                                       >  SRR4302545.1446038/1‑94 (MQ=60)
                                                          GATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACC                                      >  SRR4302545.4128285/1‑94 (MQ=60)
                                                           ATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCC                                     >  SRR4302545.8451392/1‑94 (MQ=60)
                                                           ATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCC                                     >  SRR4302545.9547678/1‑94 (MQ=60)
                                                            TTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGTCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCA                                    >  SRR4302545.3885885/1‑94 (MQ=60)
                                                            TTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCA                                    >  SRR4302545.9826353/1‑94 (MQ=60)
                                                            TTGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCA                                    <  SRR4302545.481173/94‑1 (MQ=60)
                                                             TGGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAA                                   >  SRR4302545.1648105/1‑94 (MQ=60)
                                                              tgaaatCAATTTCGCGGCTTTTTGTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  <  SRR4302545.10354496/88‑1 (MQ=60)
                                                              GGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  <  SRR4302545.4183966/94‑1 (MQ=60)
                                                              GGAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAAC                                  >  SRR4302545.2898594/1‑94 (MQ=60)
                                                               GAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 <  SRR4302545.5780998/94‑1 (MQ=60)
                                                               GAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 >  SRR4302545.7687644/1‑94 (MQ=60)
                                                               GAATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACT                                 <  SRR4302545.7978370/94‑1 (MQ=60)
                                                                AATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTT                                >  SRR4302545.9013390/1‑94 (MQ=60)
                                                                AATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTT                                >  SRR4302545.10042466/1‑94 (MQ=60)
                                                                AATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTT                                <  SRR4302545.2282460/94‑1 (MQ=60)
                                                                 ATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTG                               >  SRR4302545.10684668/1‑94 (MQ=60)
                                                                 ATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTG                               >  SRR4302545.2191169/1‑94 (MQ=60)
                                                                  TACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGA                              >  SRR4302545.1387835/1‑94 (MQ=60)
                                                                  TACAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGA                              <  SRR4302545.5317876/94‑1 (MQ=60)
                                                                    CAATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGG                            >  SRR4302545.7003581/1‑94 (MQ=60)
                                                                      ATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAA                          >  SRR4302545.10364455/1‑94 (MQ=60)
                                                                      ATTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAA                          <  SRR4302545.1974768/94‑1 (MQ=60)
                                                                       TTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAT                         >  SRR4302545.10812167/1‑94 (MQ=60)
                                                                       TTTCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAAT                         >  SRR4302545.2030875/1‑94 (MQ=60)
                                                                         TCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTT                       <  SRR4302545.7082149/94‑1 (MQ=60)
                                                                         TCGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTT                       <  SRR4302545.8966421/94‑1 (MQ=60)
                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      >  SRR4302545.3681215/1‑94 (MQ=60)
                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      <  SRR4302545.4188962/94‑1 (MQ=60)
                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      <  SRR4302545.1862396/94‑1 (MQ=60)
                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      <  SRR4302545.1862395/94‑1 (MQ=60)
                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTA                      >  SRR4302545.9896591/1‑94 (MQ=60)
                                                                          CGCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGATATTACCCAACTTGAGGAATTTA                      >  SRR4302545.5986662/1‑94 (MQ=60)
                                                                           GCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTAT                     <  SRR4302545.5497686/94‑1 (MQ=60)
                                                                           GCGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTAT                     <  SRR4302545.9901337/94‑1 (MQ=60)
                                                                            CGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATA                    <  SRR4302545.7381767/94‑1 (MQ=60)
                                                                            CGCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATA                    <  SRR4302545.3208265/94‑1 (MQ=60)
                                                                             GTCTTTTGTTTTTATGTGCCTCGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   <  SRR4302545.6165254/94‑1 (MQ=60)
                                                                             GCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   >  SRR4302545.5660563/1‑94 (MQ=60)
                                                                             GCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   >  SRR4302545.5660564/1‑94 (MQ=60)
                                                                             GCCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAA                   <  SRR4302545.1965464/94‑1 (MQ=60)
                                                                              CCTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAAT                  >  SRR4302545.3319339/1‑94 (MQ=60)
                                                                               CTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 <  SRR4302545.702700/94‑1 (MQ=60)
                                                                               CTTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATG                 >  SRR4302545.5203965/1‑94 (MQ=60)
                                                                               CTTTTGTTTTTATGGCCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTGCCCAACTTGAGGAATTTGTAATG                 <  SRR4302545.659470/94‑1 (MQ=60)
                                                                                TTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGG                <  SRR4302545.3924607/94‑1 (MQ=60)
                                                                                TTTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGG                <  SRR4302545.6127370/94‑1 (MQ=60)
                                                                                 TTTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGC               <  SRR4302545.5327899/94‑1 (MQ=60)
                                                                                  TTGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCT              >  SRR4302545.10772388/1‑94 (MQ=60)
                                                                                   TGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCCGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTA             >  SRR4302545.7879512/1‑94 (MQ=60)
                                                                                   TGTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTA             <  SRR4302545.7131325/94‑1 (MQ=60)
                                                                                    GTTTTTATGGGCCTTGCCCGTACAACGATTTTTTATATCACGGGGAGTCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAA            >  SRR4302545.2324296/1‑94 (MQ=60)
                                                                                    GTTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAA            <  SRR4302545.9795642/94‑1 (MQ=60)
                                                                                     TTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAG           >  SRR4302545.689252/1‑94 (MQ=60)
                                                                                     TTTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAG           <  SRR4302545.8722497/94‑1 (MQ=60)
                                                                                      TTTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGA          >  SRR4302545.9765220/1‑94 (MQ=60)
                                                                                       TTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGCA         >  SRR4302545.6235229/1‑94 (MQ=60)
                                                                                       TTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAA         >  SRR4302545.6235231/1‑94 (MQ=60)
                                                                                       TTTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAA         >  SRR4302545.6415966/1‑94 (MQ=60)
                                                                                        TTATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAA        <  SRR4302545.1627912/94‑1 (MQ=60)
                                                                                         TATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       >  SRR4302545.6604582/1‑94 (MQ=60)
                                                                                         TATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       <  SRR4302545.6098481/94‑1 (MQ=60)
                                                                                         TATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       >  SRR4302545.266296/1‑94 (MQ=60)
                                                                                         TATGGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAG       <  SRR4302545.8387860/94‑1 (MQ=60)
                                                                                           atgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGT      <  SRR4302545.2752115/91‑1 (MQ=60)
                                                                                           atgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGT      >  SRR4302545.8021595/4‑94 (MQ=60)
                                                                                           atgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGT      >  SRR4302545.6381517/4‑94 (MQ=60)
                                                                                            tgGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTA     <  SRR4302545.10741303/92‑1 (MQ=60)
                                                                                            GGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAATTAC    <  SRR4302545.7598812/94‑1 (MQ=60)
                                                                                            GGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    <  SRR4302545.1559179/94‑1 (MQ=60)
                                                                                            GGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTAC    <  SRR4302545.770537/94‑1 (MQ=60)
                                                                                              GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATaacgcctctgagaggctccccg   <  SRR4302545.3244535/94‑23 (MQ=60)
                                                                                              GGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACA   <  SRR4302545.51324/94‑1 (MQ=60)
                                                                                                GCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  <  SRR4302545.2721030/94‑1 (MQ=60)
                                                                                                |                                                                                              
GAAAAAGCCTAACCCAGCGATCAAAAAAGCGGCGATTTAATCGTTGCACAAGGCGTGAGATTGGAATACAATTTCGCGCCTTTTGTTTTTATGGCCTTGCCCGTAAAACGATTTTTTATATCACGGGGAGCCTCTCAGAGGCGTTATTACCCAACTTGAGGAATTTATAATGGCTAAGAAAGTACAA  >  NC_000913/4175856‑4176042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: