Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,293,960 +GC intergenic (+587/+55) gltP → / ← yjcO glutamate‑aspartate symport protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,293,9591.C100.0% 341.0 / NA 170intergenic (+586/+56)gltP/yjcOglutamate‑aspartate symport protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base C (78/92);  total (78/92)
*NC_0009134,293,9592.G100.0% 339.6 / NA 170intergenic (+586/+56)gltP/yjcOglutamate‑aspartate symport protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (78/92);  total (78/92)

Only 100 of 175 total aligned reads displayed.

TAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑‑CCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTT  >  NC_000913/4293927‑4294043
                                 ||                                                                                    
tAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATAAGGCCTATCTTaa                           <  2:928671/94‑1 (MQ=11)
 aGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAc                          <  2:5424483/94‑1 (MQ=1)
 aGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAc                          <  1:3832883/94‑1 (MQ=1)
 aGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAc                          <  2:10264714/94‑1 (MQ=1)
 aGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAc                          <  2:3280876/94‑1 (MQ=1)
 aGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAc                          <  1:237999/94‑1 (MQ=1)
  gggTGATTGTGTAGGTCGGATAAGGGGTGTACGCCGCATCCGACATCAATGCCTGATGCCACGCTTGCCGCGTCTTATCAGGCCTATCTTAAcc                         <  2:8874820/92‑1 (MQ=11)
  gCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAcc                         <  2:7964662/94‑1 (MQ=11)
  gCGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAcc                         <  1:5358747/94‑1 (MQ=11)
   cGTGATTTTGTAGGTCGGATAAGTCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCg                        <  1:7558309/94‑1 (MQ=11)
   cGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCg                        >  1:2183058/1‑94 (MQ=11)
   cGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCg                        >  2:72441/1‑94 (MQ=11)
   cGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCg                        <  2:476558/94‑1 (MQ=11)
   cGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCg                        >  2:9164750/1‑94 (MQ=11)
   cGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCg                        <  2:1592341/94‑1 (MQ=11)
   cGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCg                        >  1:8483116/1‑94 (MQ=11)
   cGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCg                        >  1:5971229/1‑94 (MQ=11)
   cGTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCg                        >  1:4846282/1‑94 (MQ=11)
    gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGt                       >  1:926590/1‑94 (MQ=11)
    gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGt                       >  2:9588702/1‑94 (MQ=11)
    gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGt                       >  2:966044/1‑94 (MQ=11)
    gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGt                       <  1:3721859/94‑1 (MQ=11)
    gTGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGt                       >  1:2766699/1‑94 (MQ=11)
     tGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCCAGCCTATCTTACCCGtt                      >  1:4968251/1‑94 (MQ=11)
     tGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGtt                      <  1:9296515/94‑1 (MQ=11)
     tGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGtt                      <  1:4538708/94‑1 (MQ=11)
     tGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGtt                      <  1:4725548/94‑1 (MQ=11)
     tGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGtt                      <  1:4725549/94‑1 (MQ=11)
     tGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGtt                      >  2:7828830/1‑94 (MQ=11)
     tGATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGtt                      >  1:1622273/1‑94 (MQ=11)
      gATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTg                     >  1:4068073/1‑94 (MQ=11)
      gATTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTg                     <  2:9486797/94‑1 (MQ=11)
       aTTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTgg                    <  2:7815026/94‑1 (MQ=11)
       aTTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTgg                    <  2:8188977/94‑1 (MQ=11)
       aTTTTGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTgg                    <  1:2114207/94‑1 (MQ=11)
        ttttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGt                   <  1:1681611/94‑1 (MQ=11)
        ttttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGt                   <  2:880138/94‑1 (MQ=11)
         tttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGtt                  >  1:10044593/1‑94 (MQ=14)
          ttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCTAGCGTTTCCGCGTCTTATCAGGCCTATCTTAACCGCTTGTTa                 >  2:6569759/1‑94 (MQ=11)
          ttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTa                 >  1:5632059/1‑94 (MQ=14)
          ttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTa                 >  1:2425672/1‑94 (MQ=14)
          ttGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTa                 <  1:9755644/94‑1 (MQ=14)
           tGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTaa                <  1:8395646/94‑1 (MQ=14)
           tGTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTaa                >  1:9933725/1‑94 (MQ=14)
            gTAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAt               <  2:937458/94‑1 (MQ=14)
             tAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtt              >  2:7333373/1‑94 (MQ=14)
             tAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtt              <  1:8163002/94‑1 (MQ=14)
             tAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtt              <  2:5131761/94‑1 (MQ=14)
             tAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtt              <  1:2681339/94‑1 (MQ=14)
             tAGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtt              <  1:1189191/94‑1 (MQ=14)
              aGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAttt             <  1:10359293/94‑1 (MQ=14)
              aGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAttt             <  2:6442982/94‑1 (MQ=14)
              aGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAttt             >  1:9704731/1‑94 (MQ=14)
              aGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAttt             >  1:3074800/1‑94 (MQ=14)
              aGGTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAttt             <  1:4912456/94‑1 (MQ=14)
               ggTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtttt            >  2:6244273/1‑94 (MQ=14)
               ggTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtttt            >  2:8351622/1‑94 (MQ=14)
               ggTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtttt            <  1:2574681/94‑1 (MQ=14)
               ggTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtttt            >  2:4164407/1‑94 (MQ=14)
                gTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAttttt           >  1:7389686/1‑94 (MQ=17)
                gTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAttttt           <  1:5746441/94‑1 (MQ=17)
                gTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAttttt           >  2:1658022/1‑94 (MQ=17)
                gTCGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAAttttt           >  1:8415930/1‑94 (MQ=17)
                  cGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCa         >  1:8844317/1‑94 (MQ=17)
                  cGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCa         <  1:834874/94‑1 (MQ=17)
                  cGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCa         >  1:193492/1‑94 (MQ=17)
                  cGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCa         >  2:4039099/1‑94 (MQ=17)
                  cGGATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCa         <  1:3426791/94‑1 (MQ=17)
                   ggATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTaaa        >  2:2300182/1‑94 (MQ=17)
                   ggATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaa        >  2:4551204/1‑94 (MQ=17)
                   ggATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaa        >  2:1354733/1‑94 (MQ=17)
                   ggATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaa        >  2:5775643/1‑94 (MQ=17)
                   ggATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaa        >  1:3300840/1‑94 (MQ=17)
                   ggATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaa        >  1:3218277/1‑94 (MQ=17)
                   ggATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaa        >  2:6824764/1‑94 (MQ=17)
                   ggATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATATTAACCGTTGGTTAATTTTTCaa        <  2:1896211/94‑1 (MQ=17)
                    gATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaaa       >  1:2981101/1‑94 (MQ=17)
                    gATAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaaa       <  1:855850/94‑1 (MQ=17)
                     aTAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAc      >  1:6536227/1‑94 (MQ=17)
                     aTAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAc      >  2:7693981/1‑94 (MQ=17)
                      tAAGGCGTTTACGCCGCGTCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAct     >  2:2998477/1‑94 (MQ=17)
                      tAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAct     <  1:5582985/94‑1 (MQ=17)
                      tAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAct     <  1:383569/94‑1 (MQ=17)
                      tAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAct     <  2:6596410/94‑1 (MQ=17)
                      tAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAct     <  2:6180612/94‑1 (MQ=17)
                      tAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAct     >  2:5698936/1‑94 (MQ=17)
                      tAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAct     <  1:7316932/94‑1 (MQ=17)
                      tAAGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAct     <  2:3143123/94‑1 (MQ=17)
                       aaGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAActc    <  1:2374602/94‑1 (MQ=18)
                       aaGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAActc    >  2:4242261/1‑94 (MQ=18)
                       aaGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAActc    >  1:4955520/1‑94 (MQ=18)
                        aGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCATActct   >  1:6193250/1‑94 (MQ=17)
                        aGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAActct   <  2:8689174/94‑1 (MQ=18)
                        aGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAActct   <  2:9078684/94‑1 (MQ=18)
                        aGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAActct   >  2:2836005/1‑94 (MQ=18)
                        aGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAActct   <  1:5103784/94‑1 (MQ=18)
                        aGGCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAActct   >  2:2650553/1‑94 (MQ=18)
                         ggCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGTCCTATCTTAACCGTTGGTTAATTTTTCAAACTCtt  <  1:6925410/94‑1 (MQ=18)
                         ggCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCtt  <  2:1364712/94‑1 (MQ=18)
                         ggCGTTTACGCCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCtt  >  1:8121827/1‑94 (MQ=18)
                                 ||                                                                                    
TAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑‑CCGCATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTT  >  NC_000913/4293927‑4294043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 273 total aligned reads displayed.
GTCATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCA  >  NC_000913/4294988‑4295174
                                                                                             |                                                                                             
GTCATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCAC                                                                                               <  SRR4302545.6559057/94‑1 (MQ=60)
GTCATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCAC                                                                                               <  SRR4302545.7276080/94‑1 (MQ=60)
GTCATGTAAATCGCCCCTTTGTTAGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCAC                                                                                               <  SRR4302545.6038576/94‑1 (MQ=60)
 TCATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACC                                                                                              >  SRR4302545.945496/1‑94 (MQ=60)
 TCATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACC                                                                                              <  SRR4302545.4190813/94‑1 (MQ=60)
  CATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCT                                                                                             <  SRR4302545.3184378/94‑1 (MQ=60)
   ATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTT                                                                                            <  SRR4302545.10078038/94‑1 (MQ=60)
   ATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTT                                                                                            >  SRR4302545.7471254/1‑94 (MQ=60)
   ATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTT                                                                                            >  SRR4302545.9714411/1‑94 (MQ=60)
   ATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTT                                                                                            >  SRR4302545.5820659/1‑94 (MQ=60)
   ATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTT                                                                                            >  SRR4302545.1999056/1‑94 (MQ=60)
   ATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTT                                                                                            >  SRR4302545.1479972/1‑94 (MQ=60)
    TGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTC                                                                                           <  SRR4302545.243226/94‑1 (MQ=60)
    TGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTC                                                                                           <  SRR4302545.2934519/94‑1 (MQ=60)
    TGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTC                                                                                           <  SRR4302545.3557284/94‑1 (MQ=60)
    TGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTC                                                                                           >  SRR4302545.10776277/1‑94 (MQ=60)
     GTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCA                                                                                          <  SRR4302545.2570552/94‑1 (MQ=60)
     GTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCA                                                                                          <  SRR4302545.1275374/94‑1 (MQ=60)
     GTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCA                                                                                          <  SRR4302545.9315141/94‑1 (MQ=60)
      TAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAA                                                                                         <  SRR4302545.4362372/94‑1 (MQ=60)
      TAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAA                                                                                         <  SRR4302545.5641998/94‑1 (MQ=60)
       AAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAAT                                                                                        <  SRR4302545.10068698/94‑1 (MQ=60)
       AAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAAT                                                                                        <  SRR4302545.1047254/94‑1 (MQ=60)
        AATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATA                                                                                       >  SRR4302545.4564866/1‑94 (MQ=60)
        AATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATA                                                                                       >  SRR4302545.1284403/1‑94 (MQ=60)
           CGCCCCTTTGTTCGGATGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCC                                                                                    <  SRR4302545.456872/94‑1 (MQ=60)
           CGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCC                                                                                    <  SRR4302545.5079090/94‑1 (MQ=60)
           CGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCC                                                                                    >  SRR4302545.10434218/1‑94 (MQ=60)
           CGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCC                                                                                    <  SRR4302545.5079091/94‑1 (MQ=60)
            GCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCA                                                                                   >  SRR4302545.5326444/1‑94 (MQ=60)
            GCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCA                                                                                   >  SRR4302545.521963/1‑94 (MQ=60)
             CCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAG                                                                                  <  SRR4302545.1706184/94‑1 (MQ=60)
             CCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAG                                                                                  >  SRR4302545.8599763/1‑94 (MQ=60)
              CCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGA                                                                                 <  SRR4302545.5380449/94‑1 (MQ=60)
               CCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGAC                                                                                <  SRR4302545.4238698/94‑1 (MQ=60)
               CCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGAC                                                                                <  SRR4302545.2300347/94‑1 (MQ=60)
               CCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGAC                                                                                <  SRR4302545.5384303/94‑1 (MQ=60)
                CTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACGCAAACCAATGCCTCACCTTCAATACCCAGACG                                                                               <  SRR4302545.7122995/94‑1 (MQ=60)
                CTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACG                                                                               >  SRR4302545.8537464/1‑94 (MQ=60)
                CTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACG                                                                               >  SRR4302545.4247347/1‑94 (MQ=60)
                CTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACG                                                                               >  SRR4302545.1386998/1‑94 (MQ=60)
                 TTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGT                                                                              <  SRR4302545.4978873/94‑1 (MQ=60)
                 TTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTAAGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGT                                                                              >  SRR4302545.7818548/1‑94 (MQ=60)
                  TTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTT                                                                             <  SRR4302545.3974995/94‑1 (MQ=60)
                  TTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTT                                                                             >  SRR4302545.398942/1‑94 (MQ=60)
                   TGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTT                                                                            <  SRR4302545.10762617/94‑1 (MQ=60)
                    GTTCGGACGATCGCTGACCTGCGCACTGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTG                                                                           <  SRR4302545.5217151/94‑1 (MQ=60)
                    GTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTG                                                                           <  SRR4302545.5217150/94‑1 (MQ=60)
                    GTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTG                                                                           <  SRR4302545.8006877/94‑1 (MQ=60)
                    GTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTG                                                                           <  SRR4302545.1434558/94‑1 (MQ=60)
                    GTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTG                                                                           >  SRR4302545.4902722/1‑94 (MQ=60)
                      TCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGC                                                                         <  SRR4302545.437984/94‑1 (MQ=60)
                      TCCGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGC                                                                         <  SRR4302545.8755436/94‑1 (MQ=60)
                       CGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCG                                                                        <  SRR4302545.4467545/94‑1 (MQ=60)
                       CGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCG                                                                        <  SRR4302545.714185/94‑1 (MQ=60)
                       CGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCG                                                                        <  SRR4302545.6991641/94‑1 (MQ=60)
                       CGGACGATCGCTGACCTGCGCACGGGCGATAATTTTGCCTTTACGCTAGGGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCG                                                                        >  SRR4302545.6258533/1‑94 (MQ=60)
                        GGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGT                                                                       <  SRR4302545.2635210/94‑1 (MQ=60)
                        GGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGT                                                                       >  SRR4302545.6210264/1‑94 (MQ=60)
                        GGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGT                                                                       <  SRR4302545.4795410/94‑1 (MQ=60)
                         GACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTC                                                                      >  SRR4302545.9824272/1‑94 (MQ=60)
                          ACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCT                                                                     <  SRR4302545.10051517/94‑1 (MQ=60)
                          ACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCT                                                                     >  SRR4302545.2994338/1‑94 (MQ=60)
                           CGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTT                                                                    <  SRR4302545.3751993/94‑1 (MQ=60)
                           CGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTT                                                                    <  SRR4302545.3570488/94‑1 (MQ=60)
                            GATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGTCGTCTTC                                                                   >  SRR4302545.8481699/1‑94 (MQ=60)
                            GATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTC                                                                   >  SRR4302545.5720043/1‑94 (MQ=60)
                            GATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTC                                                                   <  SRR4302545.1900395/94‑1 (MQ=60)
                            GATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTC                                                                   >  SRR4302545.675020/1‑94 (MQ=60)
                            GATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTC                                                                   >  SRR4302545.6461323/1‑94 (MQ=60)
                            GATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTC                                                                   <  SRR4302545.10581789/94‑1 (MQ=60)
                            GATAGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCACTACCCAGACGTTTGGAGTCTTC                                                                   >  SRR4302545.5923906/1‑94 (MQ=60)
                             ATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCG                                                                  >  SRR4302545.7682766/1‑94 (MQ=60)
                             ATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCG                                                                  <  SRR4302545.9654330/94‑1 (MQ=60)
                             ATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCG                                                                  >  SRR4302545.2341966/1‑94 (MQ=60)
                             ATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCG                                                                  <  SRR4302545.5752996/94‑1 (MQ=60)
                              TCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGG                                                                 <  SRR4302545.138806/94‑1 (MQ=60)
                              TCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGG                                                                 <  SRR4302545.9185600/94‑1 (MQ=60)
                               CGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGT                                                                >  SRR4302545.2618696/1‑94 (MQ=60)
                               CGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGT                                                                >  SRR4302545.8557226/1‑94 (MQ=60)
                               CGCTGACCTGCGCACGGGGGATAATTTTGCCTTTACTCGAGGGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTTGCGTCTTCGGT                                                                >  SRR4302545.3152958/1‑94 (MQ=60)
                                GCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTA                                                               >  SRR4302545.3628079/1‑94 (MQ=60)
                                CCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTA                                                               <  SRR4302545.8199251/94‑1 (MQ=60)
                                 CTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTAT                                                              >  SRR4302545.2261760/1‑94 (MQ=60)
                                 CTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTAT                                                              >  SRR4302545.760822/1‑94 (MQ=60)
                                 CTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTAT                                                              <  SRR4302545.10915752/94‑1 (MQ=60)
                                  TGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATT                                                             >  SRR4302545.5480172/1‑94 (MQ=60)
                                  TGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATT                                                             >  SRR4302545.9371069/1‑94 (MQ=60)
                                  TGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATT                                                             >  SRR4302545.3501942/1‑94 (MQ=60)
                                  TGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATT                                                             <  SRR4302545.7693010/94‑1 (MQ=60)
                                   GACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTG                                                            >  SRR4302545.5594152/1‑94 (MQ=60)
                                   GACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTG                                                            >  SRR4302545.5594153/1‑94 (MQ=60)
                                   GACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTG                                                            >  SRR4302545.318281/1‑94 (MQ=60)
                                    ACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGA                                                           <  SRR4302545.4286353/94‑1 (MQ=60)
                                    ACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAAACGTTTGGCGTCTTCGGTATTGA                                                           <  SRR4302545.1901026/94‑1 (MQ=60)
                                     CCTGCGCACGGGTGATAATTTTGCCTTTGCGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGAT                                                          <  SRR4302545.10661886/94‑1 (MQ=60)
                                     CCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGAA                                                          <  SRR4302545.201186/94‑1 (MQ=60)
                                      CTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATT                                                         >  SRR4302545.2110301/1‑94 (MQ=60)
                                      CTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATT                                                         >  SRR4302545.8264312/1‑94 (MQ=60)
                                      CTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATT                                                         >  SRR4302545.8261759/1‑94 (MQ=60)
                                       TGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTT                                                        >  SRR4302545.1099377/1‑94 (MQ=60)
                                        GCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTG                                                       <  SRR4302545.1052312/94‑1 (MQ=60)
                                         CGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGT                                                      <  SRR4302545.114393/94‑1 (MQ=60)
                                         CGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGT                                                      <  SRR4302545.1773362/94‑1 (MQ=60)
                                         CGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCATCACCTTCAATACCCAGACGTTTGGCGTCTTAGGTCGTGATTTGT                                                      >  SRR4302545.1597031/1‑94 (MQ=60)
                                          GCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTG                                                     <  SRR4302545.2256289/94‑1 (MQ=60)
                                          GCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTG                                                     <  SRR4302545.2301391/94‑1 (MQ=60)
                                          GCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTG                                                     >  SRR4302545.4706061/1‑94 (MQ=60)
                                           CACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGC                                                    >  SRR4302545.503878/1‑94 (MQ=60)
                                           CACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGC                                                    >  SRR4302545.882979/1‑94 (MQ=60)
                                           CACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGC                                                    >  SRR4302545.5682621/1‑94 (MQ=60)
                                            CCGGGTGATAATTTTGCCTTTCCGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGgtgcactcgcgtaaaggcaaaat                                                   <  SRR4302545.4232975/94‑24 (MQ=60)
                                            ACGGGTGATAATTTTGCCTTTTCTCCAGTGGACCCAAACCAACCCCTCACCTTAAATACCCAAACCTTTGGCGTCTTTGGTATTGATTTttgct                                                   >  SRR4302545.5833680/1‑89 (MQ=24)
                                            ACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCCATACCCAGACGTTTGGCGTCTTCGGTATTGTTTTGTGCG                                                   >  SRR4302545.9362563/1‑94 (MQ=60)
                                            ACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCG                                                   <  SRR4302545.10105156/94‑1 (MQ=60)
                                             CGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGT                                                  >  SRR4302545.2473605/1‑94 (MQ=60)
                                             CGGGTGATAATTTTGCCTTTACGCGAGGGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGCATTGATTTGTGCGT                                                  >  SRR4302545.10040706/1‑94 (MQ=60)
                                               GGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATCCCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAG                                                <  SRR4302545.6962350/94‑1 (MQ=60)
                                               GGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAG                                                <  SRR4302545.7576093/94‑1 (MQ=60)
                                               GGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAG                                                <  SRR4302545.3948016/94‑1 (MQ=60)
                                               GGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAG                                                <  SRR4302545.1376559/94‑1 (MQ=60)
                                               GGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAG                                                <  SRR4302545.3647991/94‑1 (MQ=60)
                                               GGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAG                                                >  SRR4302545.8720362/1‑94 (MQ=60)
                                               GGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAG                                                >  SRR4302545.1771227/1‑94 (MQ=60)
                                                GTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGGCGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGC                                               <  SRR4302545.8607006/94‑1 (MQ=60)
                                                 TGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCG                                              >  SRR4302545.6786627/1‑94 (MQ=60)
                                                 TGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCC                                              <  SRR4302545.9191890/94‑1 (MQ=60)
                                                 TGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCC                                              >  SRR4302545.3427838/1‑94 (MQ=60)
                                                 TGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCC                                              <  SRR4302545.7341454/94‑1 (MQ=60)
                                                 TGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCC                                              >  SRR4302545.8509847/1‑94 (MQ=60)
                                                 GGATAATTTTTCCTTTACGCGAGGTCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTCCGGTATTGATTTGTGCGTAGCC                                              <  SRR4302545.5518402/94‑1 (MQ=60)
                                                  GATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCA                                             <  SRR4302545.8552079/94‑1 (MQ=60)
                                                  GATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCA                                             >  SRR4302545.3194536/1‑94 (MQ=60)
                                                    TAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGG                                           >  SRR4302545.3664341/1‑94 (MQ=60)
                                                     AATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGT                                          >  SRR4302545.8237981/1‑94 (MQ=60)
                                                      ATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTT                                         <  SRR4302545.6344367/94‑1 (MQ=60)
                                                        TTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCA                                       <  SRR4302545.1437214/94‑1 (MQ=60)
                                                        TTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCA                                       >  SRR4302545.3377289/1‑94 (MQ=60)
                                                         TTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCAT                                      <  SRR4302545.8262821/94‑1 (MQ=60)
                                                         TTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCAT                                      <  SRR4302545.10045930/94‑1 (MQ=60)
                                                          TGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATC                                     >  SRR4302545.4225183/1‑94 (MQ=60)
                                                           GCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCA                                    >  SRR4302545.3550514/1‑94 (MQ=60)
                                                           GCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCA                                    >  SRR4302545.10216782/1‑94 (MQ=60)
                                                            CCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAG                                   >  SRR4302545.403087/1‑94 (MQ=60)
                                                            CCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAG                                   <  SRR4302545.8344627/94‑1 (MQ=60)
                                                            CCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAG                                   <  SRR4302545.5967804/94‑1 (MQ=60)
                                                            CCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGCTCATCAG                                   >  SRR4302545.958994/1‑94 (MQ=60)
                                                             CTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGC                                  <  SRR4302545.9490904/94‑1 (MQ=60)
                                                              TTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCC                                 <  SRR4302545.5032129/94‑1 (MQ=60)
                                                              TTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCC                                 <  SRR4302545.8546292/94‑1 (MQ=60)
                                                                TACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAG                               <  SRR4302545.8096972/94‑1 (MQ=60)
                                                                 ACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGC                              >  SRR4302545.8118919/1‑94 (MQ=60)
                                                                 ACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGC                              <  SRR4302545.6893213/94‑1 (MQ=60)
                                                                  CGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCG                             <  SRR4302545.2732234/94‑1 (MQ=60)
                                                                   GCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGC                            >  SRR4302545.6197146/1‑94 (MQ=60)
                                                                    CGAGTGCACCCAAACCAATGCCTCACCTTCAATGCCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCC                           <  SRR4302545.8381052/94‑1 (MQ=60)
                                                                    CGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCC                           >  SRR4302545.170182/1‑94 (MQ=60)
                                                                    CGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCC                           >  SRR4302545.1082060/1‑94 (MQ=60)
                                                                    CGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCC                           <  SRR4302545.630505/94‑1 (MQ=60)
                                                                    CGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCC                           <  SRR4302545.6345146/94‑1 (MQ=60)
                                                                     GAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCG                          >  SRR4302545.2700726/1‑94 (MQ=60)
                                                                     GAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCG                          <  SRR4302545.6209180/94‑1 (MQ=60)
                                                                     GAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGATTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCG                          >  SRR4302545.6288264/1‑94 (MQ=60)
                                                                      AGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGC                         >  SRR4302545.8421147/1‑94 (MQ=60)
                                                                       GTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCC                        <  SRR4302545.3382191/94‑1 (MQ=60)
                                                                         GCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAG                      <  SRR4302545.2853922/94‑1 (MQ=60)
                                                                          CACCCAAACCAATGTCTCACCTTCAATACCCAGACGATTGGCGGCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGT                     >  SRR4302545.10642580/1‑94 (MQ=60)
                                                                          CACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGT                     >  SRR4302545.3064005/1‑94 (MQ=60)
                                                                          CACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGT                     <  SRR4302545.9580253/94‑1 (MQ=60)
                                                                           ACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTG                    >  SRR4302545.9110411/1‑94 (MQ=60)
                                                                           ACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTG                    >  SRR4302545.1534448/1‑94 (MQ=60)
                                                                            CCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGGGTAGCCAGGTTCATCAGACAGCGCCGCCAGTGC                   >  SRR4302545.7724583/1‑94 (MQ=60)
                                                                            CCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGC                   >  SRR4302545.7875569/1‑94 (MQ=60)
                                                                             CCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCC                  <  SRR4302545.850082/94‑1 (MQ=60)
                                                                             CCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCC                  >  SRR4302545.9048289/1‑94 (MQ=60)
                                                                              CAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCG                 >  SRR4302545.4982848/1‑94 (MQ=60)
                                                                               AAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGC                <  SRR4302545.469342/94‑1 (MQ=60)
                                                                               AAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGA                >  SRR4302545.1278618/1‑94 (MQ=60)
                                                                               AAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTCCCGC                >  SRR4302545.2973577/1‑94 (MQ=60)
                                                                                AACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCA               <  SRR4302545.9118106/94‑1 (MQ=60)
                                                                                AACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCA               >  SRR4302545.6090691/1‑94 (MQ=60)
                                                                                AACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCA               >  SRR4302545.724655/1‑94 (MQ=60)
                                                                                 ACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCAC              <  SRR4302545.2047831/94‑1 (MQ=60)
                                                                                 ACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCAC              >  SRR4302545.8578086/1‑94 (MQ=60)
                                                                                 ACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCAC              >  SRR4302545.2069103/1‑94 (MQ=60)
                                                                                  CCAATGCCTCCCCTTCAATACCCAGGCGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCAAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACA             <  SRR4302545.10440744/94‑1 (MQ=60)
                                                                                  CCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACC             >  SRR4302545.390619/1‑94 (MQ=60)
                                                                                  CCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACA             >  SRR4302545.10327939/1‑94 (MQ=60)
                                                                                  CCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACA             >  SRR4302545.10327940/1‑94 (MQ=60)
                                                                                  CCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACA             <  SRR4302545.6418334/94‑1 (MQ=60)
                                                                                   CAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAG            >  SRR4302545.5554708/1‑94 (MQ=60)
                                                                                    AATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGT           <  SRR4302545.4884088/94‑1 (MQ=60)
                                                                                    AATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGT           >  SRR4302545.560878/1‑94 (MQ=60)
                                                                                       GCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTAC        >  SRR4302545.9935379/1‑94 (MQ=60)
                                                                                       GCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTAC        <  SRR4302545.8171688/94‑1 (MQ=60)
                                                                                        CCTCACCTTCAATACCCAGGCGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACC       <  SRR4302545.2043057/94‑1 (MQ=60)
                                                                                        CCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACC       >  SRR4302545.7533013/1‑94 (MQ=60)
                                                                                         CTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCG      <  SRR4302545.10466457/94‑1 (MQ=60)
                                                                                         CTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCG      >  SRR4302545.1142988/1‑94 (MQ=60)
                                                                                             CCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCA  <  SRR4302545.1183931/94‑1 (MQ=60)
                                                                                             |                                                                                             
GTCATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCA  >  NC_000913/4294988‑4295174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑