Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,295,081 |
T→C |
D622G (GAT→GGT) |
fdhF ← |
selenopolypeptide subunit of formate dehydrogenase H |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,295,081 | 0 | T | C | 100.0%
| 791.1
/ NA
| 224 | D622G (GAT→GGT) | fdhF | selenopolypeptide subunit of formate dehydrogenase H |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (120/104); total (120/104) |
Only 100 of 229 total aligned reads displayed.
ATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCG > NC_000913/4294991‑4295170
|
tGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCtt > 1:4499664/1‑93 (MQ=255)
gTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTc > 1:2020488/1‑93 (MQ=255)
tAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCa > 1:5121153/1‑93 (MQ=255)
aaaTCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTTACCTTCaa < 2:677463/93‑1 (MQ=255)
aaTCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAAt > 2:1031805/1‑93 (MQ=255)
aaTCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAAt < 2:3648466/93‑1 (MQ=255)
aTCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATa > 1:1828384/1‑93 (MQ=255)
tCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATAc < 2:2438783/93‑1 (MQ=255)
gCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATAccc < 2:2250989/93‑1 (MQ=255)
gCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGAGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACATTCAATAccc > 1:1538598/1‑93 (MQ=255)
ccccTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCa > 1:3751680/1‑93 (MQ=255)
cccTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAg < 2:1771699/93‑1 (MQ=255)
ccTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAgc > 2:527010/1‑92 (MQ=255)
cTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGAc > 2:3360118/1‑93 (MQ=255)
tttGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACg > 2:3321776/1‑93 (MQ=255)
tttGTTCGGACGATCGCTGACCTGCGCACGGGCGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACg > 2:6461917/1‑93 (MQ=255)
tGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGtt < 2:5663294/93‑1 (MQ=255)
tGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGtt < 2:2000901/93‑1 (MQ=255)
gTTCGGACGATCGCTGACCTGCGCACGGGGGCTAATTTTGCCTTTACGCGAGTGCACACACACCAATGCCTCACCTTACATACCCAGACGttt > 1:4711320/1‑93 (MQ=255)
ttCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTg < 1:2933120/93‑1 (MQ=255)
ttCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTg < 1:4013045/93‑1 (MQ=255)
ttCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTg > 1:1126195/1‑93 (MQ=255)
tCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTgg < 1:6348825/93‑1 (MQ=255)
aCGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTc < 1:901675/93‑1 (MQ=255)
cGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCt < 1:2191333/93‑1 (MQ=255)
gATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCtt < 1:5955490/93‑1 (MQ=255)
aTCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTc > 1:3538304/1‑93 (MQ=255)
aTCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTc > 1:939706/1‑93 (MQ=255)
aTCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTc > 2:267269/1‑93 (MQ=255)
tCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCg < 2:3417679/93‑1 (MQ=255)
tCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCg < 1:6162874/93‑1 (MQ=255)
cGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCgg < 2:894640/93‑1 (MQ=255)
gCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGt > 2:1609857/1‑93 (MQ=255)
tGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTAt > 2:2749863/1‑93 (MQ=255)
gACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTAtt > 1:3563776/1‑93 (MQ=255)
gACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTAtt < 2:4088044/93‑1 (MQ=255)
aCCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTg > 1:4789927/1‑93 (MQ=255)
aCCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTg > 2:4730059/1‑93 (MQ=255)
ccTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGa < 1:3360016/93‑1 (MQ=255)
cTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGAt < 1:423677/93‑1 (MQ=255)
tGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGAtt > 2:795650/1‑93 (MQ=255)
cgcACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTtg < 1:6004911/93‑1 (MQ=255)
gcACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTtgt > 2:4027029/1‑93 (MQ=255)
ccGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGc < 2:2903167/92‑1 (MQ=255)
aCGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGc < 2:5098503/93‑1 (MQ=255)
gggTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGt < 2:5906932/93‑1 (MQ=255)
ggTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTa < 1:2078230/93‑1 (MQ=255)
ggTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTa < 1:5218001/93‑1 (MQ=255)
ggTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTa > 2:1553253/1‑93 (MQ=255)
ggTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTa < 2:1443711/93‑1 (MQ=255)
ggTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTa < 2:4936951/93‑1 (MQ=255)
tGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGc > 2:85585/1‑93 (MQ=255)
ggATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGc < 2:2132521/92‑1 (MQ=255)
aTAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCa > 2:3458211/1‑93 (MQ=255)
aTAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCa < 1:5389207/93‑1 (MQ=255)
tAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAg < 1:3188340/93‑1 (MQ=255)
aTTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGt > 2:5599436/1‑93 (MQ=255)
aTTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGt > 1:1003233/1‑93 (MQ=255)
aTTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGt < 1:4955982/93‑1 (MQ=255)
ttttGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGtt > 1:1173129/1‑93 (MQ=255)
ttttGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGtt > 1:1503432/1‑93 (MQ=255)
ttttGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGtt > 1:2869443/1‑93 (MQ=255)
tGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTtcat < 1:1518735/93‑1 (MQ=255)
ccTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTtcatca < 2:1934219/93‑1 (MQ=255)
ccTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTtcatca > 1:6074774/1‑93 (MQ=255)
cTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATcag < 1:4707215/93‑1 (MQ=255)
cTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATcag > 2:1082305/1‑93 (MQ=255)
ttACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATcagcc < 1:1235757/93‑1 (MQ=255)
aCGTGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATcagccag < 2:5837942/93‑1 (MQ=255)
cgcgAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATcagccagc < 1:1615445/93‑1 (MQ=255)
gcgAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGATTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAgcg > 2:4196205/1‑93 (MQ=255)
gAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGcgcc > 1:5688523/1‑93 (MQ=255)
aGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGcgccg > 1:1684399/1‑93 (MQ=255)
gTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGcgccgc > 1:2707020/1‑93 (MQ=255)
cACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAg > 2:4249623/1‑93 (MQ=255)
aCCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGt > 2:6243312/1‑93 (MQ=255)
ccAAACCAATGCCTCACCTTCAATCCCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGc < 2:2077771/93‑1 (MQ=255)
ccAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGc < 2:5537571/93‑1 (MQ=255)
cAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGcc > 2:5933298/1‑93 (MQ=255)
cAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGcc > 1:3817844/1‑93 (MQ=255)
aaaCCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCg > 2:3069435/1‑93 (MQ=255)
aaCCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGc > 2:1212246/1‑93 (MQ=255)
aaCCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGc > 1:4634427/1‑93 (MQ=255)
aCCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGca < 1:41809/93‑1 (MQ=255)
ccAATGCCTCACCTTCAATCCCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGcac < 2:1873931/93‑1 (MQ=255)
cAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGcaca > 2:3126555/1‑93 (MQ=255)
aaTGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAg > 2:2555496/1‑93 (MQ=255)
aTGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGt > 1:3882352/1‑93 (MQ=255)
aTGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGt < 2:2185263/93‑1 (MQ=255)
tGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGtt < 1:6192403/93‑1 (MQ=255)
gCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTa > 1:82904/1‑93 (MQ=255)
ccTCACCTTCAATACCCAGACTTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCGGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTAc < 1:4940021/93‑1 (MQ=255)
cTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTAcc < 2:4364914/93‑1 (MQ=255)
cTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTAcc < 2:1275702/93‑1 (MQ=255)
cTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTAcc > 2:2378174/1‑93 (MQ=255)
cTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTAcc > 2:234137/1‑93 (MQ=255)
cTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTAcc > 1:5280497/1‑93 (MQ=255)
tCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCg < 2:4953365/93‑1 (MQ=255)
tCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCg > 2:3918410/1‑93 (MQ=255)
tCACCTTCAATACCCAGACGTTTGGCGTCTTCGGCATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCg > 1:3036649/1‑93 (MQ=255)
|
ATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCG > NC_000913/4294991‑4295170
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCA > NC_000913/4294989‑4295174
|
TCATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACC < SRR4302537.3330808/94‑1 (MQ=60)
CATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCT > SRR4302537.5557467/1‑94 (MQ=60)
ATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTT > SRR4302537.4530784/1‑94 (MQ=60)
TGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTC > SRR4302537.2034583/1‑94 (MQ=60)
GTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCA > SRR4302537.6115270/1‑94 (MQ=60)
GTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCA > SRR4302537.5156451/1‑94 (MQ=60)
TAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAA > SRR4302537.1364788/1‑94 (MQ=60)
AAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAAT < SRR4302537.521146/94‑1 (MQ=60)
AAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAAT < SRR4302537.6176524/94‑1 (MQ=60)
AATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATA > SRR4302537.1841124/1‑94 (MQ=60)
TCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACC < SRR4302537.1594144/94‑1 (MQ=60)
CGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGAGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACATTCAATACCC > SRR4302537.1549339/1‑94 (MQ=60)
GCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCA > SRR4302537.3778030/1‑94 (MQ=60)
CCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAG < SRR4302537.5322439/94‑1 (MQ=60)
CCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGAC < SRR4302537.4558693/94‑1 (MQ=60)
TGTTCGGACGATCGCTGACCTGCGCACGGGGGCTAATTTTGCCTTTACGCGAGTGCACACACACCAATGCCTCACCTTACATACCCAGACGTTT > SRR4302537.4743911/1‑94 (MQ=60)
GTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTG > SRR4302537.1134003/1‑94 (MQ=60)
GTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGGGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTG > SRR4302537.5310318/1‑94 (MQ=60)
TTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGG < SRR4302537.2335059/94‑1 (MQ=60)
TTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGG < SRR4302537.2953718/94‑1 (MQ=60)
TTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGG < SRR4302537.1905652/94‑1 (MQ=60)
TTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGG < SRR4302537.4041145/94‑1 (MQ=60)
TCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGC > SRR4302537.5754427/1‑94 (MQ=60)
TCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGC < SRR4302537.6392181/94‑1 (MQ=60)
GGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGT > SRR4302537.928508/1‑94 (MQ=60)
ACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCT > SRR4302537.2938830/1‑94 (MQ=60)
ACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCT < SRR4302537.907897/94‑1 (MQ=60)
CGATCGCTGACCTGCGCACGGGTGATAATTTTTCCTTTACGCGATTGCACCCAAACCCATGCCTCACCTTCCATACCCAGACGTTTAGCGTCTT > SRR4302537.2065745/1‑94 (MQ=60)
CGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTT < SRR4302537.2206773/94‑1 (MQ=60)
CGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTT > SRR4302537.4938745/1‑94 (MQ=60)
CGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTT > SRR4302537.1236506/1‑94 (MQ=60)
GATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTC > SRR4302537.5111354/1‑94 (MQ=60)
GATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTC > SRR4302537.946190/1‑94 (MQ=60)
GATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTC > SRR4302537.3563294/1‑94 (MQ=60)
GATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTC < SRR4302537.5996372/94‑1 (MQ=60)
TCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGG < SRR4302537.6205291/94‑1 (MQ=60)
TCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGG < SRR4302537.4876494/94‑1 (MQ=60)
CGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGT < SRR4302537.3313682/94‑1 (MQ=60)
CGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGT > SRR4302537.3347821/1‑94 (MQ=60)
GCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTA > SRR4302537.6158685/1‑94 (MQ=60)
TGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATT > SRR4302537.3588912/1‑94 (MQ=60)
GCCCTGCGCACGGGTGATAACTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTG < SRR4302537.2048602/94‑1 (MQ=60)
GACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTG < SRR4302537.1000386/94‑1 (MQ=60)
GACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTG > SRR4302537.4822987/1‑94 (MQ=60)
GACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTG < SRR4302537.160514/94‑1 (MQ=60)
GACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTG > SRR4302537.4987523/1‑94 (MQ=60)
ACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGA > SRR4302537.6209342/1‑94 (MQ=60)
CCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGAT < SRR4302537.3383815/94‑1 (MQ=60)
CCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGAT > SRR4302537.3766511/1‑94 (MQ=60)
CTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATT > SRR4302537.3830655/1‑94 (MQ=60)
CTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATT < SRR4302537.426616/94‑1 (MQ=60)
TGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTT < SRR4302537.3893572/94‑1 (MQ=60)
CGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGT < SRR4302537.3572140/94‑1 (MQ=60)
CGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGT < SRR4302537.6046163/94‑1 (MQ=60)
CGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGT < SRR4302537.4684353/94‑1 (MQ=60)
GCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTG > SRR4302537.1034455/1‑94 (MQ=60)
GGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAG < SRR4302537.5253886/94‑1 (MQ=60)
GGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAG < SRR4302537.2092865/94‑1 (MQ=60)
GTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGC > SRR4302537.4224108/1‑94 (MQ=60)
TGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCC > SRR4302537.115653/1‑94 (MQ=60)
TGATAATTTTGCCTTTACGAGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCC < SRR4302537.4800698/94‑1 (MQ=60)
ATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCGAG > SRR4302537.4315846/1‑94 (MQ=60)
ATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAG < SRR4302537.5426031/94‑1 (MQ=60)
TAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGG < SRR4302537.3994791/94‑1 (MQ=60)
TAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGG < SRR4302537.3210767/94‑1 (MQ=60)
AATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGT > SRR4302537.1010158/1‑94 (MQ=60)
ATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTT < SRR4302537.343625/94‑1 (MQ=60)
ATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTT > SRR4302537.2889583/1‑94 (MQ=60)
ATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTT < SRR4302537.4990153/94‑1 (MQ=60)
ATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTT > SRR4302537.1513924/1‑94 (MQ=60)
ATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTT > SRR4302537.4740096/1‑94 (MQ=60)
ATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTT > SRR4302537.1181291/1‑94 (MQ=60)
TGCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATC < SRR4302537.1529350/94‑1 (MQ=60)
GCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCA < SRR4302537.1407754/94‑1 (MQ=60)
GCCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCA > SRR4302537.6116520/1‑94 (MQ=60)
CCTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAG < SRR4302537.784662/94‑1 (MQ=60)
CTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGC > SRR4302537.2193027/1‑94 (MQ=60)
CTTTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGC < SRR4302537.4739779/94‑1 (MQ=60)
TTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATCCCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCA < SRR4302537.5208526/94‑1 (MQ=60)
TTACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCA < SRR4302537.1244349/94‑1 (MQ=60)
ACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGC < SRR4302537.785872/94‑1 (MQ=60)
ACGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGC < SRR4302537.1547051/94‑1 (MQ=60)
CGCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCG < SRR4302537.1626731/94‑1 (MQ=60)
GCGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGC > SRR4302537.4106572/1‑94 (MQ=60)
CGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCC > SRR4302537.5727433/1‑94 (MQ=60)
CGAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCC < SRR4302537.5652579/94‑1 (MQ=60)
GAGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCG > SRR4302537.1696194/1‑94 (MQ=60)
AGTGCACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGC > SRR4302537.2725919/1‑94 (MQ=60)
ACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTG < SRR4302537.2999053/94‑1 (MQ=60)
ACCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTG < SRR4302537.3761891/94‑1 (MQ=60)
CCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGC > SRR4302537.2850275/1‑94 (MQ=60)
CCCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGC > SRR4302537.6377102/1‑94 (MQ=60)
CCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCC < SRR4302537.4563327/94‑1 (MQ=60)
CCAAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCC > SRR4302537.3844616/1‑94 (MQ=60)
AAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGC > SRR4302537.4666484/1‑94 (MQ=60)
AAACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGC > SRR4302537.1659678/1‑94 (MQ=60)
ACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCAC < SRR4302537.42119/94‑1 (MQ=60)
ACCAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCAC > SRR4302537.1794900/1‑94 (MQ=60)
CAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAG < SRR4302537.1523645/94‑1 (MQ=60)
CAATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAG > SRR4302537.3093316/1‑94 (MQ=60)
AATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGT > SRR4302537.3909511/1‑94 (MQ=60)
AATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGT < SRR4302537.894880/94‑1 (MQ=60)
ATGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTT > SRR4302537.600548/1‑94 (MQ=60)
TGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTA < SRR4302537.6235067/94‑1 (MQ=60)
TGCCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTA > SRR4302537.83512/1‑94 (MQ=60)
CCTCACCTTCAATACCCAGACTTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCGGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACC < SRR4302537.4974090/94‑1 (MQ=60)
CCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACC > SRR4302537.5316825/1‑94 (MQ=60)
CCTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACC > SRR4302537.4149225/1‑94 (MQ=60)
CTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCG > SRR4302537.2775838/1‑94 (MQ=60)
CTCACCTTCAATACCCAGACGTTTGGCGTCTTCGGCATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCG > SRR4302537.3057816/1‑94 (MQ=60)
CACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGT < SRR4302537.398576/94‑1 (MQ=60)
ACCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTC > SRR4302537.4266613/1‑94 (MQ=60)
CCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCA > SRR4302537.6359019/1‑94 (MQ=60)
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TCATGTAAATCGCCCCTTTGTTCGGACGATCGCTGACCTGCGCACGGGTGATAATTTTGCCTTTACGCGAGTGCACCCAAACCAATGCCTCATCTTCAATACCCAGACGTTTGGCGTCTTCGGTATTGATTTGTGCGTAGCCAGGTTCATCAGCCAGCGCCGCCAGTGCCGCACAGTTACCGGTCA > NC_000913/4294989‑4295174
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
