Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,337,864 A→G L80P (CTT→CCT)  adiA ← biodegradative arginine decarboxylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,337,8640AG99.7% 2006.6 / ‑3.5 572L80P (CTT→CCT) adiAbiodegradative arginine decarboxylase
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base G (305/265);  total (305/267)
Fisher's exact test for biased strand distribution p-value = 2.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.46e-01

Only 100 of 580 total aligned reads displayed.

CGACAAGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTCGTTTGAAG  >  NC_000913/4337772‑4337954
                                                                                            |                                                                                          
cGACAAGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAg                                                                                           <  2:7384652/94‑1 (MQ=255)
  aCAAGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCt                                                                                         >  1:7527840/1‑94 (MQ=255)
   cAAGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCtt                                                                                        <  1:8025786/94‑1 (MQ=255)
   cAAGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCtt                                                                                        <  1:7293991/94‑1 (MQ=255)
   cAAGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCta                                                                                        >  2:9036519/1‑93 (MQ=255)
    aaGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTa                                                                                       >  2:2379534/1‑94 (MQ=255)
     aGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTAc                                                                                      >  1:10248101/1‑94 (MQ=255)
     aGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTAc                                                                                      <  1:491944/94‑1 (MQ=255)
            gcagGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCaa                                                                               >  2:3423136/1‑94 (MQ=255)
             cagGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAAt                                                                              >  1:10598710/1‑94 (MQ=255)
              agGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAAtt                                                                             >  2:10134008/1‑94 (MQ=255)
              agGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAAtt                                                                             >  2:7158480/1‑94 (MQ=255)
               ggTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAAttt                                                                            >  1:6096639/1‑93 (MQ=255)
               ggTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTg                                                                            <  2:76400/94‑1 (MQ=255)
                gTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGt                                                                           <  1:3369863/94‑1 (MQ=255)
                 tCGCGTTCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTc                                                                          <  2:1424548/94‑1 (MQ=255)
                  cgcgATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCt                                                                         <  2:5344715/94‑1 (MQ=255)
                   gcgATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTg                                                                        >  2:61219/1‑94 (MQ=255)
                   gcgATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTg                                                                        <  2:2098307/94‑1 (MQ=255)
                    cgATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTgc                                                                       >  2:8423104/1‑93 (MQ=255)
                    cgATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGa                                                                       >  2:7765477/1‑94 (MQ=255)
                     gATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGAc                                                                      >  1:10022332/1‑94 (MQ=255)
                     gATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGAc                                                                      >  1:8853220/1‑94 (MQ=255)
                     gATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGAc                                                                      <  2:158024/94‑1 (MQ=255)
                     gATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGAc                                                                      >  2:2535702/1‑94 (MQ=255)
                      aTCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACg                                                                     <  1:2263596/94‑1 (MQ=255)
                      aTCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACg                                                                     <  1:6747386/94‑1 (MQ=255)
                        ccATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACATGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGtt                                                                   >  2:1896212/1‑94 (MQ=255)
                         cATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGTGCTCATGAGGCTTACCGATCAATTGTCTGACGttt                                                                  >  1:9067858/1‑94 (MQ=255)
                         cATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGttt                                                                  >  1:1041033/1‑94 (MQ=255)
                          aTTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGtttt                                                                 >  2:4063515/1‑94 (MQ=255)
                          aTTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGtttt                                                                 <  1:2438854/94‑1 (MQ=255)
                            tGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGa                                                               <  2:4868143/94‑1 (MQ=255)
                             gcggcgAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGAt                                                              <  1:2610248/94‑1 (MQ=255)
                               ggcgAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGt                                                            <  2:10622777/94‑1 (MQ=255)
                                  gAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCg                                                         >  2:8758110/1‑94 (MQ=255)
                                  gAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCg                                                         >  1:6430603/1‑94 (MQ=255)
                                  gAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCg                                                         <  2:8075862/94‑1 (MQ=255)
                                   aGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGt                                                        <  1:276088/94‑1 (MQ=255)
                                    gggCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTc                                                       >  1:6630356/1‑94 (MQ=255)
                                    gggCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTc                                                       <  1:6271749/94‑1 (MQ=255)
                                     ggCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTcc                                                      >  1:8226623/1‑94 (MQ=255)
                                       cTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCgg                                                    <  1:9933315/94‑1 (MQ=255)
                                       cTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCgg                                                    >  2:9809718/1‑94 (MQ=255)
                                       cTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCgg                                                    >  1:3837851/1‑94 (MQ=255)
                                       cTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCgg                                                    >  1:5793044/1‑94 (MQ=255)
                                         ttttCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGAt                                                  <  2:9545578/94‑1 (MQ=255)
                                           ttCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGt                                                <  1:5629556/94‑1 (MQ=255)
                                            tCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGtt                                               >  1:4487759/1‑94 (MQ=255)
                                            tCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGtt                                               >  1:3641592/1‑94 (MQ=255)
                                             cccGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTc                                              >  1:4781307/1‑94 (MQ=255)
                                              ccGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTcc                                             >  2:8301950/1‑94 (MQ=255)
                                               cGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCa                                            <  2:6775697/94‑1 (MQ=255)
                                                gATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCAt                                           >  1:1784238/1‑94 (MQ=255)
                                                 aTCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCAtt                                          <  2:4540758/94‑1 (MQ=255)
                                                  tCGCCCAACAGGAAGGGCGGCGCGTTTTGTTGGCGCTTATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCAttt                                         <  1:9518507/94‑1 (MQ=255)
                                                   cGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTg                                        >  1:3147418/1‑94 (MQ=255)
                                                    gCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCAGGATGTTCCATGTGa                                       >  1:5188827/1‑94 (MQ=255)
                                                      ccAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATa                                     >  1:1906937/1‑94 (MQ=255)
                                                       cAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAg                                    >  2:5652632/1‑94 (MQ=255)
                                                       cAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAg                                    >  1:7881174/1‑94 (MQ=255)
                                                       cAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAg                                    >  1:1587343/1‑94 (MQ=255)
                                                        aaCAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGc                                   <  2:10484138/94‑1 (MQ=255)
                                                        aaCAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATCGTCTGCCGTTTTGTTGTTCGTCCGGTTGTTCATTTTGATAGc                                   >  2:9111476/1‑94 (MQ=255)
                                                          taGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTg                                 >  2:1167536/2‑94 (MQ=255)
                                                          cAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTg                                 >  1:870642/1‑94 (MQ=255)
                                                           aGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGa                                >  2:6505765/1‑94 (MQ=255)
                                                           aGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGa                                >  1:1270300/1‑94 (MQ=255)
                                                           aGGAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGa                                >  1:9329572/1‑94 (MQ=255)
                                                             gAAGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAAc                              >  2:2846357/1‑94 (MQ=255)
                                                              aaGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACa                             <  1:3925588/94‑1 (MQ=255)
                                                               aGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACAt                            >  1:416842/1‑94 (MQ=255)
                                                               aGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACAt                            >  1:837967/1‑94 (MQ=255)
                                                               aGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACAt                            >  1:9194647/1‑94 (MQ=255)
                                                               aGACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACAt                            >  2:4620185/1‑94 (MQ=255)
                                                                gACCGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATc                           <  2:3742258/94‑1 (MQ=255)
                                                                  ccGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAg                         <  2:5447597/94‑1 (MQ=255)
                                                                   cGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAgg                        <  2:5056154/94‑1 (MQ=255)
                                                                   cGGCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAgg                        <  1:6959629/94‑1 (MQ=255)
                                                                    ggCACGTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGc                       <  2:596069/94‑1 (MQ=255)
                                                                         gTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCa                  >  1:4708449/1‑94 (MQ=255)
                                                                         gTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCa                  >  2:10356222/1‑94 (MQ=255)
                                                                         gTTTTGTTGGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCa                  <  1:2956930/94‑1 (MQ=255)
                                                                           tttGTGGGCGCTCATGAGGCTNACCGAGCAATTGTCTTACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAAt                <  2:856801/94‑1 (MQ=255)
                                                                            ttgttgGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATg               <  1:5392388/94‑1 (MQ=255)
                                                                            ttgttgGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATg               <  2:6239714/94‑1 (MQ=255)
                                                                            ttgttgGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATg               <  1:8568222/94‑1 (MQ=255)
                                                                               ttgGCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCt            <  1:2176232/94‑1 (MQ=255)
                                                                                 ggCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTc          <  2:7471405/94‑1 (MQ=255)
                                                                                 ggCGCTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTc          <  1:7663445/94‑1 (MQ=255)
                                                                                  gcgcTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTCg         >  1:400742/1‑94 (MQ=255)
                                                                                   cgcTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTCGt        >  1:9765914/1‑94 (MQ=255)
                                                                                   cgcTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTCGt        >  2:3099634/1‑94 (MQ=255)
                                                                                   cgcTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTCGt        >  1:6504971/1‑94 (MQ=255)
                                                                                    gcTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTCGtt       >  1:7107470/1‑94 (MQ=255)
                                                                                    gcTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTCGtt       >  2:9232853/1‑94 (MQ=255)
                                                                                     cTCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACAt                            <  1:2025156/72‑1 (MQ=255)
                                                                                      tCATGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTCGTTTg     >  1:1457752/1‑94 (MQ=255)
                                                                                        aTGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTCGTTTGaa   >  2:3918334/1‑94 (MQ=255)
                                                                                         tGAGGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTCGTTTGAag  <  2:5176023/94‑1 (MQ=255)
                                                                                            |                                                                                          
CGACAAGCTCCAGCAGGTCGCGATCCATTGCGGCGAGGGCTTTTTCCCGATCGCCCAACAGGAAGACCGGCACGTTTTGTTGGCGCTCATGAAGCTTACCGATCAATTGTCTGACGTTTTGATGTTCGTCCGGATGTTCCATTTGATAGCTGAACATCAGGCAGTCAATGGCTTCGTTTGAAG  >  NC_000913/4337772‑4337954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 326 total aligned reads displayed.
CAGGAGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGTCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACATCGAG  >  NC_000913/4355745‑4355931
                                                                                             |                                                                                             
 AGGAGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCC                                                                                              >  SRR4302545.7087280/1‑94 (MQ=60)
 AGGAGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCC                                                                                              >  SRR4302545.594503/1‑94 (MQ=60)
 AGGAGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCC                                                                                              <  SRR4302545.1094137/94‑1 (MQ=60)
 AGGAGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCC                                                                                              >  SRR4302545.4699495/1‑94 (MQ=60)
  GGAGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCT                                                                                             >  SRR4302545.2600424/1‑94 (MQ=60)
  GGAGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCT                                                                                             <  SRR4302545.414563/94‑1 (MQ=60)
   GAGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTG                                                                                            >  SRR4302545.8361994/1‑94 (MQ=60)
   GAGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTG                                                                                            >  SRR4302545.1556249/1‑94 (MQ=60)
    AGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGC                                                                                           >  SRR4302545.10189178/1‑94 (MQ=60)
    AGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGC                                                                                           <  SRR4302545.4305824/94‑1 (MQ=60)
     GTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCT                                                                                          >  SRR4302545.10325877/1‑94 (MQ=60)
      TACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTT                                                                                         <  SRR4302545.10077663/94‑1 (MQ=60)
      TACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTT                                                                                         <  SRR4302545.8579039/94‑1 (MQ=60)
       ACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTG                                                                                        >  SRR4302545.7156482/1‑94 (MQ=60)
        CAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGA                                                                                       >  SRR4302545.4337742/1‑94 (MQ=60)
         AGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGAT                                                                                      >  SRR4302545.7540118/1‑94 (MQ=60)
         AGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGAT                                                                                      >  SRR4302545.8882231/1‑94 (MQ=60)
          GAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATC                                                                                     <  SRR4302545.5865842/94‑1 (MQ=60)
          GAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATC                                                                                     >  SRR4302545.3757512/1‑94 (MQ=60)
           AAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCT                                                                                    >  SRR4302545.9629419/1‑94 (MQ=60)
           AAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCT                                                                                    >  SRR4302545.6272714/1‑94 (MQ=60)
            AAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTT                                                                                   <  SRR4302545.9752316/94‑1 (MQ=60)
            AAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTT                                                                                   >  SRR4302545.7046675/1‑94 (MQ=60)
             AGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTA                                                                                  >  SRR4302545.4426763/1‑94 (MQ=60)
              GTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTAT                                                                                 <  SRR4302545.1617566/94‑1 (MQ=60)
              GTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTAT                                                                                 <  SRR4302545.8904588/94‑1 (MQ=60)
              ATATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTAT                                                                                 <  SRR4302545.8904589/94‑1 (MQ=60)
              ATATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTAT                                                                                 <  SRR4302545.5583234/94‑1 (MQ=60)
               TATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATT                                                                                <  SRR4302545.7375234/94‑1 (MQ=60)
               TATATTTACCTTCACGAACATATTTAAACAGTGCTTGAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATT                                                                                >  SRR4302545.7495795/1‑94 (MQ=60)
                ATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTA                                                                               >  SRR4302545.6544122/1‑94 (MQ=60)
                ATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTA                                                                               <  SRR4302545.8849873/94‑1 (MQ=60)
                 TATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAG                                                                              <  SRR4302545.4230642/94‑1 (MQ=60)
                 TATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAG                                                                              >  SRR4302545.10182391/1‑94 (MQ=60)
                 TATTTACCTTCACGAACATATTGAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAG                                                                              >  SRR4302545.10709585/1‑94 (MQ=60)
                 TATTTACCTACACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAG                                                                              <  SRR4302545.137666/94‑1 (MQ=60)
                  ATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGC                                                                             >  SRR4302545.8507513/1‑94 (MQ=60)
                  ATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGC                                                                             <  SRR4302545.9467306/94‑1 (MQ=60)
                  ATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGACTGCTTGATCTTATTAGC                                                                             >  SRR4302545.848030/1‑94 (MQ=60)
                   TTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCA                                                                            >  SRR4302545.8662948/1‑94 (MQ=60)
                    TTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAA                                                                           <  SRR4302545.2557039/94‑1 (MQ=60)
                     TACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAAT                                                                          >  SRR4302545.1970715/1‑94 (MQ=60)
                      ACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATA                                                                         >  SRR4302545.586718/1‑94 (MQ=60)
                      ACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATA                                                                         <  SRR4302545.6042822/94‑1 (MQ=60)
                      ACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATA                                                                         >  SRR4302545.102/1‑94 (MQ=60)
                       CCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATAT                                                                        >  SRR4302545.8426443/1‑94 (MQ=60)
                       CCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATAT                                                                        >  SRR4302545.2293609/1‑94 (MQ=60)
                       CCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATAT                                                                        <  SRR4302545.6901629/94‑1 (MQ=60)
                       CCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATAT                                                                        >  SRR4302545.10551014/1‑94 (MQ=60)
                        CTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATC                                                                       >  SRR4302545.8366143/1‑94 (MQ=60)
                         TTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCT                                                                      >  SRR4302545.5430614/1‑94 (MQ=60)
                         TTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCT                                                                      >  SRR4302545.10402269/1‑94 (MQ=60)
                          TCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTT                                                                     <  SRR4302545.124521/94‑1 (MQ=60)
                           CACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTC                                                                    <  SRR4302545.3216731/94‑1 (MQ=60)
                           CACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTC                                                                    >  SRR4302545.2727252/1‑94 (MQ=60)
                           CACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTC                                                                    <  SRR4302545.7626593/94‑1 (MQ=60)
                           CACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTC                                                                    >  SRR4302545.6057949/1‑94 (MQ=60)
                           CACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTC                                                                    <  SRR4302545.18729/94‑1 (MQ=60)
                            ACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTATCAATATCTTCA                                                                   >  SRR4302545.7753320/1‑94 (MQ=60)
                            ACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCA                                                                   <  SRR4302545.1682062/94‑1 (MQ=60)
                            ACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCA                                                                   >  SRR4302545.2815469/1‑94 (MQ=60)
                            ACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCA                                                                   <  SRR4302545.2843938/94‑1 (MQ=60)
                            ACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCA                                                                   <  SRR4302545.2049381/94‑1 (MQ=60)
                            ACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCA                                                                   <  SRR4302545.3375686/94‑1 (MQ=60)
                             CGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAG                                                                  <  SRR4302545.4058690/94‑1 (MQ=60)
                             CGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAG                                                                  >  SRR4302545.10033039/1‑94 (MQ=60)
                             CGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAG                                                                  >  SRR4302545.5992116/1‑94 (MQ=60)
                             CGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAG                                                                  >  SRR4302545.2129594/1‑94 (MQ=60)
                             CGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAG                                                                  >  SRR4302545.2624786/1‑94 (MQ=60)
                              GAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGC                                                                 <  SRR4302545.8951281/94‑1 (MQ=60)
                              GAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGC                                                                 >  SRR4302545.7029262/1‑94 (MQ=60)
                               AACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCA                                                                >  SRR4302545.115864/1‑94 (MQ=60)
                               AACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCA                                                                <  SRR4302545.7193090/94‑1 (MQ=60)
                               AACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCA                                                                >  SRR4302545.2314434/1‑94 (MQ=60)
                               AACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCA                                                                <  SRR4302545.7956391/94‑1 (MQ=60)
                               AACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCA                                                                >  SRR4302545.10518636/1‑94 (MQ=60)
                                ACATATTTAAACAGTGCTTTAGTCAGAGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAG                                                               <  SRR4302545.7227096/94‑1 (MQ=60)
                                 CATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGC                                                              <  SRR4302545.6879452/94‑1 (MQ=60)
                                  ATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCA                                                             >  SRR4302545.9490413/1‑94 (MQ=60)
                                  ATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCA                                                             <  SRR4302545.10486652/94‑1 (MQ=60)
                                   TATTTAAACAGTTCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCAC                                                            >  SRR4302545.7103235/1‑94 (MQ=60)
                                   TATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCAC                                                            >  SRR4302545.6560319/1‑94 (MQ=60)
                                   TATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCAC                                                            >  SRR4302545.5673429/1‑94 (MQ=60)
                                    ATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACC                                                           >  SRR4302545.4077213/1‑94 (MQ=60)
                                    ATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACC                                                           >  SRR4302545.7059287/1‑94 (MQ=60)
                                      TTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCA                                                         <  SRR4302545.7678749/94‑1 (MQ=60)
                                      TTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCA                                                         >  SRR4302545.5560616/1‑94 (MQ=60)
                                      TTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCA                                                         <  SRR4302545.5510892/94‑1 (MQ=60)
                                      TTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCA                                                         <  SRR4302545.1208937/94‑1 (MQ=60)
                                       TAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAG                                                        >  SRR4302545.3490853/1‑94 (MQ=60)
                                       TAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGCGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAG                                                        >  SRR4302545.1130851/1‑94 (MQ=60)
                                         AACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCG                                                      <  SRR4302545.8354392/94‑1 (MQ=60)
                                         AACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCG                                                      >  SRR4302545.3142131/1‑94 (MQ=60)
                                         AACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACACCGCG                                                      >  SRR4302545.2182858/1‑94 (MQ=60)
                                            AGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCAT                                                   <  SRR4302545.1162375/94‑1 (MQ=60)
                                             GTTCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATA                                                  <  SRR4302545.8203092/94‑1 (MQ=60)
                                             GTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATA                                                  >  SRR4302545.3195006/1‑94 (MQ=60)
                                             GTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATA                                                  <  SRR4302545.5363677/94‑1 (MQ=60)
                                              TGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATAT                                                 >  SRR4302545.991602/1‑94 (MQ=60)
                                               GCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATT                                                <  SRR4302545.9062777/94‑1 (MQ=60)
                                               GCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATT                                                <  SRR4302545.683594/94‑1 (MQ=60)
                                               GCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATT                                                >  SRR4302545.2908134/1‑94 (MQ=60)
                                               GCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATT                                                >  SRR4302545.5455025/1‑94 (MQ=60)
                                               GCTGTAGTCAGCGGAGGCAGAATAGTGTTGAGATATTCGTGTGTGGCTTGCTTGATCTTATTAGCAATGTCTTCAGCAGCACCCAGCGCATATT                                                <  SRR4302545.683595/94‑1 (MQ=60)
                                                CTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTC                                               <  SRR4302545.7249111/94‑1 (MQ=60)
                                                 TTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCA                                              >  SRR4302545.7625304/1‑94 (MQ=60)
                                                 TTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCA                                              >  SRR4302545.798504/1‑94 (MQ=60)
                                                 TTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCA                                              >  SRR4302545.605022/1‑94 (MQ=60)
                                                 TTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCA                                              <  SRR4302545.1825109/94‑1 (MQ=60)
                                                 TTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCA                                              >  SRR4302545.4019729/1‑94 (MQ=60)
                                                  TTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCATCAGCAGCACCCAGCGCATATTCAA                                             >  SRR4302545.8865750/1‑94 (MQ=60)
                                                   TAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAA                                            >  SRR4302545.32529/1‑94 (MQ=60)
                                                   TAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAA                                            <  SRR4302545.821889/94‑1 (MQ=60)
                                                    AGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAG                                           >  SRR4302545.4278043/1‑94 (MQ=60)
                                                    AGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAG                                           >  SRR4302545.930374/1‑94 (MQ=60)
                                                    AGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAG                                           <  SRR4302545.9637894/94‑1 (MQ=60)
                                                      TCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAA                                         <  SRR4302545.2126310/94‑1 (MQ=60)
                                                       CAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAG                                        >  SRR4302545.9577716/1‑94 (MQ=60)
                                                       CAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAG                                        >  SRR4302545.127512/1‑94 (MQ=60)
                                                       CAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAG                                        >  SRR4302545.4657312/1‑94 (MQ=60)
                                                        AGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGC                                       >  SRR4302545.2262158/1‑94 (MQ=60)
                                                        AGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGC                                       >  SRR4302545.7095758/1‑94 (MQ=60)
                                                        AGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGC                                       >  SRR4302545.2443280/1‑94 (MQ=60)
                                                         GCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCT                                      >  SRR4302545.2996458/1‑94 (MQ=60)
                                                          CGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTA                                     <  SRR4302545.3673215/94‑1 (MQ=60)
                                                          CGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTA                                     <  SRR4302545.82545/94‑1 (MQ=60)
                                                           GGAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAA                                    <  SRR4302545.5250663/94‑1 (MQ=60)
                                                            GAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAAT                                   >  SRR4302545.2029272/1‑94 (MQ=60)
                                                            GAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAAT                                   <  SRR4302545.4961549/94‑1 (MQ=60)
                                                            GAGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAAT                                   >  SRR4302545.893086/1‑94 (MQ=60)
                                                             AGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATC                                  <  SRR4302545.10278203/94‑1 (MQ=60)
                                                             AGGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATC                                  >  SRR4302545.3439463/1‑94 (MQ=60)
                                                              GGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCT                                 >  SRR4302545.5403340/1‑94 (MQ=60)
                                                              GGCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCT                                 <  SRR4302545.2740672/94‑1 (MQ=60)
                                                               GCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTG                                <  SRR4302545.10153803/94‑1 (MQ=60)
                                                               GCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTG                                <  SRR4302545.3220976/94‑1 (MQ=60)
                                                               GCAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTG                                <  SRR4302545.8579110/94‑1 (MQ=60)
                                                                CAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGT                               >  SRR4302545.10235672/1‑94 (MQ=60)
                                                                CAGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGT                               >  SRR4302545.165929/1‑94 (MQ=60)
                                                                 AGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTA                              >  SRR4302545.7392014/1‑94 (MQ=60)
                                                                 AGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTA                              >  SRR4302545.4637124/1‑94 (MQ=60)
                                                                 AGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTA                              <  SRR4302545.4990867/94‑1 (MQ=60)
                                                                 AGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTA                              >  SRR4302545.5395549/1‑94 (MQ=60)
                                                                 AGAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTA                              >  SRR4302545.9820465/1‑94 (MQ=60)
                                                                 AGAATAGTGTTGATATATTCGTCAGTGGCATGCTTGATCTTATTAGCAATATCTTCAGCAGTACCCACCGCATATTCAAAGAAGCTAATCTGTA                              >  SRR4302545.3885860/1‑94 (MQ=60)
                                                                  GAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAA                             >  SRR4302545.8675138/1‑94 (MQ=60)
                                                                  GAATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAA                             <  SRR4302545.4833423/94‑1 (MQ=60)
                                                                  GAATAGTGTTGATATATTCGTCAGAGGCCTGCGTGATCTTATTAGCAATATCTTCAGCAGGACTCAGCGCATATTCAAAGTAGCTAATCTGTAA                             <  SRR4302545.10628508/94‑1 (MQ=60)
                                                                   GATAGTGTGGATATATTCGTCAGTAGCCTGCTTGATCTTAGTAGCAATATCTTCAGCAGTGCCCAGCTCATATTCAAAGAAGCTAATCTGTAAA                            <  SRR4302545.7598117/94‑1 (MQ=60)
                                                                   AATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAA                            >  SRR4302545.4670335/1‑94 (MQ=60)
                                                                    ATAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAAC                           >  SRR4302545.5700636/1‑94 (MQ=60)
                                                                     TAGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACG                          <  SRR4302545.5075253/94‑1 (MQ=60)
                                                                      AGTGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGC                         >  SRR4302545.10745916/1‑94 (MQ=60)
                                                                        TGTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAG                       <  SRR4302545.573372/94‑1 (MQ=60)
                                                                         GTTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGG                      >  SRR4302545.9277903/1‑94 (MQ=60)
                                                                          TTGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGT                     <  SRR4302545.9167259/94‑1 (MQ=60)
                                                                           TGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGgaaagccaggta                    >  SRR4302545.3645734/1‑82 (MQ=60)
                                                                           TGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTC                    >  SRR4302545.2514164/1‑94 (MQ=60)
                                                                           TGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTC                    <  SRR4302545.3688119/94‑1 (MQ=60)
                                                                           TGATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTC                    >  SRR4302545.8455978/1‑94 (MQ=60)
                                                                             ATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCATCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCAT                  >  SRR4302545.878049/1‑94 (MQ=60)
                                                                             ATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCATCGCATATTCAAAGAAGATAATCTGTAAACGCAGGTCAT                  >  SRR4302545.6133654/1‑94 (MQ=60)
                                                                             ATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCAT                  >  SRR4302545.1013935/1‑94 (MQ=60)
                                                                             ATATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCAT                  >  SRR4302545.2430086/1‑94 (MQ=60)
                                                                              TATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATT                 <  SRR4302545.10235333/94‑1 (MQ=60)
                                                                              TATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATT                 >  SRR4302545.8637790/1‑94 (MQ=60)
                                                                              TATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATT                 >  SRR4302545.7956071/1‑94 (MQ=60)
                                                                              TATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATT                 >  SRR4302545.4931416/1‑94 (MQ=60)
                                                                              TATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATT                 <  SRR4302545.1605595/94‑1 (MQ=60)
                                                                               ATATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTC                <  SRR4302545.3910744/94‑1 (MQ=60)
                                                                                TATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCA               <  SRR4302545.10040496/94‑1 (MQ=60)
                                                                                TATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCA               >  SRR4302545.676159/1‑94 (MQ=60)
                                                                                TATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCA               >  SRR4302545.5721111/1‑94 (MQ=60)
                                                                                 ATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAG              >  SRR4302545.10602772/1‑94 (MQ=60)
                                                                                 ATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAG              >  SRR4302545.10897878/1‑94 (MQ=60)
                                                                                 ATTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAG              >  SRR4302545.5565538/1‑94 (MQ=60)
                                                                                  TTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGG             <  SRR4302545.6652111/94‑1 (MQ=60)
                                                                                  TTCGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGG             <  SRR4302545.6652429/94‑1 (MQ=60)
                                                                                    CGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCATCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCT           >  SRR4302545.5488775/1‑94 (MQ=60)
                                                                                    CGTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCT           >  SRR4302545.5346830/1‑94 (MQ=60)
                                                                                    CGTCAGTGGCCTGCTTGATCTTACTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCT           <  SRR4302545.5967684/94‑1 (MQ=60)
                                                                                     GTCAGTGGCCTGCTTGCTCTTATTAGCAATATCTTCAGCAGCCCCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTT          <  SRR4302545.9217027/94‑1 (MQ=60)
                                                                                     GTCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTT          >  SRR4302545.3120584/1‑94 (MQ=60)
                                                                                      TCAGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTA         >  SRR4302545.9249317/1‑94 (MQ=60)
                                                                                        AGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACA       <  SRR4302545.5341587/94‑1 (MQ=60)
                                                                                        AGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACA       <  SRR4302545.2332934/94‑1 (MQ=60)
                                                                                        AGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACA       <  SRR4302545.2395874/94‑1 (MQ=60)
                                                                                        AGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACA       <  SRR4302545.1690254/94‑1 (MQ=60)
                                                                                        AGTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACA       <  SRR4302545.6384867/94‑1 (MQ=60)
                                                                                         GTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACAT      <  SRR4302545.6495995/94‑1 (MQ=60)
                                                                                         GTGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACAT      <  SRR4302545.2092102/94‑1 (MQ=60)
                                                                                          TGGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACATC     >  SRR4302545.6107693/1‑94 (MQ=60)
                                                                                           GGTCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACATCG    >  SRR4302545.5768983/1‑94 (MQ=60)
                                                                                           GGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACATCG    >  SRR4302545.6359959/1‑94 (MQ=60)
                                                                                           GGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACATCG    >  SRR4302545.331407/1‑94 (MQ=60)
                                                                                           GGCCTGCTTGATCTTATTAGCAATATCTTCAGCAGAACCCAGCGCATATTCAAAGAAGCTAATCTGTACACGCAAGACATTGACGCTTACATCG    >  SRR4302545.6957131/1‑94 (MQ=60)
                                                                                            GCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACATCGA   <  SRR4302545.9383072/94‑1 (MQ=60)
                                                                                            GCCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACATCGA   <  SRR4302545.2566410/94‑1 (MQ=60)
                                                                                             CCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACATCGAG  <  SRR4302545.1491015/94‑1 (MQ=60)
                                                                                             CCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACATCGAG  <  SRR4302545.10770836/94‑1 (MQ=60)
                                                                                             |                                                                                             
CAGGAGTACAGAAAGTATATTTACCTTCACGAACATATTTAAACAGTGCTTTAGTCAGCGGAGGCAGAATAGTGTTGATATATTCGTCAGTGGTCTGCTTGATCTTATTAGCAATATCTTCAGCAGCACCCAGCGCATATTCAAAGAAGCTAATCTGTAAACGCAGGTCATTCAGGCTTACATCGAG  >  NC_000913/4355745‑4355931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑