Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,435,684 +A coding (400/501 nt) ytfI → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,435,6811.A99.5% 2285.8 / 0.2 582coding (397/501 nt)ytfIhypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (1/2);  new base A (286/293);  total (287/295)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 634 total aligned reads displayed.

CGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAAC‑AAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATT  >  NC_000913/4435588‑4435769
                                                                                              |                                                                                        
cGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGaac                                                                                           <  2:7152776/94‑1 (MQ=255)
 gAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGaac‑a                                                                                         <  2:4515633/94‑1 (MQ=255)
 gAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGaac‑a                                                                                         >  2:10352787/1‑94 (MQ=255)
 gAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGaac‑a                                                                                         >  1:5644355/1‑94 (MQ=255)
  aGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGaac‑aa                                                                                        <  2:9719869/94‑1 (MQ=255)
  aGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGaac‑aa                                                                                        >  2:2848715/1‑94 (MQ=255)
  aGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGaac‑aa                                                                                        >  1:235491/1‑94 (MQ=255)
   ggTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGaac‑aaa                                                                                       <  2:6020221/94‑1 (MQ=255)
       gTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGaac‑aaaacag                                                                                   <  1:842197/94‑5 (MQ=255)
         ggATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGAc                                                                                  <  2:8479735/94‑1 (MQ=255)
         ggATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGAc                                                                                  <  2:3800950/94‑1 (MQ=255)
         ggATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGAc                                                                                  <  1:197269/94‑1 (MQ=255)
         ggATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGAc                                                                                  >  1:5337663/1‑94 (MQ=255)
         ggATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGAc                                                                                  <  1:9662796/94‑1 (MQ=255)
            tttGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGAt                                                                               <  2:2170078/94‑1 (MQ=255)
            tttGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGAt                                                                               >  1:3852146/1‑94 (MQ=255)
               gAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGt                                                                            >  1:8251575/1‑94 (MQ=255)
               gAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGt                                                                            >  1:5039496/1‑94 (MQ=255)
                aaTACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTa                                                                           <  1:1129038/94‑1 (MQ=255)
                 aTACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGATGATTGTAt                                                                          >  1:9200006/1‑94 (MQ=255)
                 aTACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTAt                                                                          <  1:10151870/94‑1 (MQ=255)
                 aTACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTAt                                                                          <  1:267997/94‑1 (MQ=255)
                  tACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATg                                                                         <  1:6343419/94‑1 (MQ=255)
                   aCGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGc                                                                        <  2:6218042/94‑1 (MQ=255)
                   aCGAAGAAATACCAATAACAATAAATGAATATAACTCATTCATGGATTTCAAAACCCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGc                                                                        <  1:7748779/94‑1 (MQ=255)
                     gaagaaATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCt                                                                      >  2:5735828/1‑94 (MQ=255)
                     gaagaaATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCt                                                                      <  1:8898011/94‑1 (MQ=255)
                     gaagaaATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCt                                                                      <  1:126829/94‑1 (MQ=255)
                     gaagaaATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCt                                                                      <  2:9092505/94‑1 (MQ=255)
                     gaagaaATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCt                                                                      <  1:1358174/94‑1 (MQ=255)
                      aagaaATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTg                                                                     <  2:8870909/94‑1 (MQ=255)
                       agaaATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTgg                                                                    >  2:9020479/1‑94 (MQ=255)
                       agaaATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTgg                                                                    >  2:8658245/1‑94 (MQ=255)
                        gaaATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTggg                                                                   >  2:3528639/1‑94 (MQ=255)
                         aaaTACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGa                                                                  >  1:7520074/1‑94 (MQ=255)
                              cacATAACAATAAATGAATATATCTCATTCATGGATTTCAAAAACCGTGAATGTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTc                                                             <  2:9247419/92‑1 (MQ=255)
                               ccATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCt                                                            <  1:2912808/94‑1 (MQ=255)
                               ccATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCt                                                            <  1:9484738/94‑1 (MQ=255)
                                 aTAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTAc                                                          <  2:4161802/94‑1 (MQ=255)
                                 aTAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTAc                                                          <  2:3639797/94‑1 (MQ=255)
                                   aaCAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAg                                                        <  2:4714564/94‑1 (MQ=255)
                                     cAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGaa                                                      >  2:1108412/1‑94 (MQ=255)
                                      aaTAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGaaa                                                     >  2:2741176/1‑94 (MQ=255)
                                       aTAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGaaaa                                                    <  2:10466309/94‑1 (MQ=255)
                                          aaTGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAAc                                                 >  1:3349563/1‑94 (MQ=255)
                                            tGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAg                                               >  1:9041724/1‑94 (MQ=255)
                                            tGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTATACAGAAAAAACAg                                               >  2:6845311/1‑94 (MQ=255)
                                              aaTATAACTCATTCATTGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTc                                             >  2:8168340/1‑94 (MQ=255)
                                              aaTATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTc                                             <  1:10561730/94‑1 (MQ=255)
                                               atatAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCt                                            >  1:2818609/1‑94 (MQ=255)
                                                tataACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTg                                           <  1:8680284/94‑1 (MQ=255)
                                                tataACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTg                                           >  1:3700431/1‑94 (MQ=255)
                                                tataACTCATTCATGGATTTCAAAAACCGTGAATTTCCATTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTg                                           <  2:1857011/94‑1 (MQ=255)
                                                  taACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGATGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGAc                                         <  2:4806368/94‑1 (MQ=255)
                                                  taACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGAc                                         >  1:1574713/1‑94 (MQ=255)
                                                  taACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGAc                                         >  1:3556256/1‑94 (MQ=255)
                                                  taACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGAc                                         >  2:2027135/1‑94 (MQ=255)
                                                    aCTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACAt                                       <  1:4948974/94‑1 (MQ=255)
                                                     cTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATa                                      <  2:9553938/94‑1 (MQ=255)
                                                     cTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATa                                      >  1:3229630/1‑94 (MQ=255)
                                                      tcattcatGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATAc                                     >  1:10368970/1‑94 (MQ=255)
                                                       cattcatGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATAcc                                    <  2:1219249/94‑1 (MQ=255)
                                                         ttcatGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGa                                  >  2:10266289/1‑94 (MQ=255)
                                                         ttcatGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGa                                  <  2:7890486/94‑1 (MQ=255)
                                                         ttcatGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGa                                  >  1:9605662/1‑94 (MQ=255)
                                                         ttcatGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGa                                  >  1:8023031/1‑94 (MQ=255)
                                                         ttcatGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGa                                  <  2:4423895/94‑1 (MQ=255)
                                                          tcatGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGaa                                 >  2:6708503/1‑94 (MQ=255)
                                                           catGGATTTCAAAAACCGTGAATATCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGaaa                                <  1:7259636/94‑1 (MQ=255)
                                                            atGGATTTCAAAAGCCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTATAGAAAAAACAGTCTGACATACCGaaaa                               <  2:5521870/94‑1 (MQ=255)
                                                             tGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAg                              >  1:8524819/1‑94 (MQ=255)
                                                               gATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGa                            >  2:6578509/1‑94 (MQ=255)
                                                                aTTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGAt                           <  2:8240485/94‑1 (MQ=255)
                                                                  ttCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTa                         >  2:4949211/1‑94 (MQ=255)
                                                                   tCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTaa                        <  1:4683181/94‑1 (MQ=255)
                                                                    cAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTaaa                       >  1:6946242/1‑94 (MQ=255)
                                                                     aaaaaCCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAg                      <  2:2974221/94‑1 (MQ=255)
                                                                      aaaaCCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAgg                     >  2:3398999/1‑94 (MQ=255)
                                                                        aaCCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGtt                   <  2:944827/94‑1 (MQ=255)
                                                                        aaCCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGtt                   <  2:2616955/94‑1 (MQ=255)
                                                                         aCCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTACAGGTta                  >  2:7380988/1‑94 (MQ=255)
                                                                         aCCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTta                  <  1:4390160/94‑1 (MQ=255)
                                                                         aCCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTta                  >  1:6730284/1‑94 (MQ=255)
                                                                          ccGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTtat                 >  1:7882172/1‑94 (MQ=255)
                                                                           cGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTtata                >  2:1549191/1‑94 (MQ=255)
                                                                           cGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTtata                <  1:1743185/94‑1 (MQ=255)
                                                                           cGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTtata                <  1:6248450/94‑1 (MQ=255)
                                                                             tGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATAtt              <  2:3161846/94‑1 (MQ=255)
                                                                              gAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTc             >  1:5909657/1‑94 (MQ=255)
                                                                               aaTTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCa            >  1:6424603/1‑94 (MQ=255)
                                                                                 tttCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAANGGATTAAAGGTTATATTCAcc          >  2:7804982/1‑94 (MQ=255)
                                                                                 tttCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCAcc          <  2:5172435/94‑1 (MQ=255)
                                                                                 tttCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCGGCAAAACCGAAAAGGATTAAAGGTAAATTTCAca          >  2:5934994/1‑93 (MQ=255)
                                                                                   tCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAg        >  1:4019456/1‑94 (MQ=255)
                                                                                   tCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAg        <  2:5304613/94‑1 (MQ=255)
                                                                                    ccGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAgg       <  1:2146689/94‑1 (MQ=255)
                                                                                    ccGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAgg       <  1:10026927/94‑1 (MQ=255)
                                                                                      gTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCg     <  2:7761816/94‑1 (MQ=255)
                                                                                        tAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGAt   >  1:9860234/1‑94 (MQ=255)
                                                                                        tAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGAt   >  2:1008266/1‑94 (MQ=255)
                                                                                              |                                                                                        
CGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAAC‑AAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATT  >  NC_000913/4435588‑4435769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 329 total aligned reads displayed.
TTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGT  >  NC_000913/4439736‑4439922
                                                                                             |                                                                                             
 TTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCG                                                                                              <  SRR4302545.5178228/94‑1 (MQ=60)
 TTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCG                                                                                              <  SRR4302545.904930/94‑1 (MQ=60)
 TTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCG                                                                                              >  SRR4302545.8775922/1‑94 (MQ=60)
 TTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCG                                                                                              <  SRR4302545.4833604/94‑1 (MQ=60)
  TATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGA                                                                                             >  SRR4302545.8494962/1‑94 (MQ=60)
  TATCAAATAAACTCATGATGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGA                                                                                             >  SRR4302545.7213894/1‑94 (MQ=60)
   ATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAA                                                                                            >  SRR4302545.1983602/1‑94 (MQ=60)
    TCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAAT                                                                                           <  SRR4302545.9738233/94‑1 (MQ=60)
    TCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAAT                                                                                           >  SRR4302545.6549587/1‑94 (MQ=60)
     CAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATA                                                                                          >  SRR4302545.3036820/1‑94 (MQ=60)
     CAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATA                                                                                          <  SRR4302545.8619280/94‑1 (MQ=60)
      AAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAG                                                                                         <  SRR4302545.5962689/94‑1 (MQ=60)
      AAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAG                                                                                         >  SRR4302545.1914143/1‑94 (MQ=60)
        ATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGT                                                                                       >  SRR4302545.3298602/1‑94 (MQ=60)
        ATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGT                                                                                       >  SRR4302545.5123653/1‑94 (MQ=60)
         TAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTC                                                                                      >  SRR4302545.1271768/1‑94 (MQ=60)
         TAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTC                                                                                      <  SRR4302545.3958819/94‑1 (MQ=60)
          AAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCT                                                                                     >  SRR4302545.4513655/1‑94 (MQ=60)
          AAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCT                                                                                     <  SRR4302545.714490/94‑1 (MQ=60)
          AAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCT                                                                                     <  SRR4302545.8001980/94‑1 (MQ=60)
          AAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCT                                                                                     >  SRR4302545.1543297/1‑94 (MQ=60)
          AAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCT                                                                                     >  SRR4302545.3695547/1‑94 (MQ=60)
            ACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAA                                                                                   >  SRR4302545.10044599/1‑94 (MQ=60)
            ACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAA                                                                                   <  SRR4302545.1008760/94‑1 (MQ=60)
            ACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAA                                                                                   >  SRR4302545.7991513/1‑94 (MQ=60)
             CTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAA                                                                                  >  SRR4302545.6563080/1‑94 (MQ=60)
             CTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAA                                                                                  <  SRR4302545.7853463/94‑1 (MQ=60)
             CTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAA                                                                                  <  SRR4302545.4024432/94‑1 (MQ=60)
             CTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGATAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAA                                                                                  >  SRR4302545.4603551/1‑94 (MQ=60)
              TCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAG                                                                                 >  SRR4302545.584132/1‑94 (MQ=60)
              TCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAG                                                                                 <  SRR4302545.730285/94‑1 (MQ=60)
               CATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGT                                                                                >  SRR4302545.637694/1‑94 (MQ=60)
               CATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGT                                                                                <  SRR4302545.3927778/94‑1 (MQ=60)
                ATGGTGTCGCTCTTCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTA                                                                               <  SRR4302545.10019321/94‑1 (MQ=60)
                ATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTA                                                                               <  SRR4302545.395092/94‑1 (MQ=60)
                  GGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAA                                                                             >  SRR4302545.9405577/1‑94 (MQ=60)
                  GGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAA                                                                             <  SRR4302545.9025412/94‑1 (MQ=60)
                   GTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAA                                                                            >  SRR4302545.9226050/1‑94 (MQ=60)
                    TGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAAC                                                                           >  SRR4302545.2520681/1‑94 (MQ=60)
                    TGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAAC                                                                           >  SRR4302545.4825797/1‑94 (MQ=60)
                      TCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACAT                                                                         >  SRR4302545.2173949/1‑94 (MQ=60)
                      TCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACAT                                                                         >  SRR4302545.1370424/1‑94 (MQ=60)
                        GCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAA                                                                       >  SRR4302545.3917504/1‑94 (MQ=60)
                        GCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAA                                                                       <  SRR4302545.59718/94‑1 (MQ=60)
                        GCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAA                                                                       >  SRR4302545.5224482/1‑94 (MQ=60)
                         CTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAG                                                                      >  SRR4302545.1610165/1‑94 (MQ=60)
                         CTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAG                                                                      <  SRR4302545.1780360/94‑1 (MQ=60)
                         CTCTCACGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACATAAG                                                                      <  SRR4302545.10487103/94‑1 (MQ=60)
                           CTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAA                                                                    >  SRR4302545.7962815/1‑94 (MQ=60)
                           CTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAA                                                                    <  SRR4302545.8709206/94‑1 (MQ=60)
                            TCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAA                                                                   <  SRR4302545.385070/94‑1 (MQ=60)
                            TCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAA                                                                   <  SRR4302545.4351824/94‑1 (MQ=60)
                             CCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAAT                                                                  >  SRR4302545.4091341/1‑94 (MQ=60)
                             CCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAAT                                                                  >  SRR4302545.7104988/1‑94 (MQ=60)
                             CCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAAT                                                                  >  SRR4302545.5371514/1‑94 (MQ=60)
                             CCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAAT                                                                  <  SRR4302545.6350451/94‑1 (MQ=60)
                             CCCGAAAATCGGTCATTGGGGCTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGACTAAAGTAAAACATAAGAAAT                                                                  >  SRR4302545.10655652/1‑94 (MQ=60)
                              CCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATA                                                                 >  SRR4302545.10737692/1‑94 (MQ=60)
                              CCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATA                                                                 <  SRR4302545.7627871/94‑1 (MQ=60)
                               CGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATAT                                                                >  SRR4302545.425812/1‑94 (MQ=60)
                               CGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATAT                                                                >  SRR4302545.10895627/1‑94 (MQ=60)
                               CGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATAT                                                                <  SRR4302545.7850674/94‑1 (MQ=60)
                               CGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATAT                                                                <  SRR4302545.1182173/94‑1 (MQ=60)
                                GAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATT                                                               <  SRR4302545.8788588/94‑1 (MQ=60)
                                GAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATT                                                               >  SRR4302545.7279666/1‑94 (MQ=60)
                                 AAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTT                                                              <  SRR4302545.8073540/94‑1 (MQ=60)
                                 AAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTT                                                              <  SRR4302545.6147992/94‑1 (MQ=60)
                                   AATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGG                                                            <  SRR4302545.10864665/94‑1 (MQ=60)
                                   AATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGG                                                            <  SRR4302545.9877234/94‑1 (MQ=60)
                                   AATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGG                                                            <  SRR4302545.9840226/94‑1 (MQ=60)
                                    ATCGGTCATTGTGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGG                                                           <  SRR4302545.4379528/94‑1 (MQ=60)
                                    ATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGG                                                           >  SRR4302545.3850504/1‑94 (MQ=60)
                                    ATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGG                                                           >  SRR4302545.7836487/1‑94 (MQ=60)
                                     TCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGG                                                          >  SRR4302545.5574024/1‑94 (MQ=60)
                                     TCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGG                                                          <  SRR4302545.8505724/94‑1 (MQ=60)
                                      CGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGT                                                         >  SRR4302545.3936932/1‑94 (MQ=60)
                                      CGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGT                                                         >  SRR4302545.2843863/1‑94 (MQ=60)
                                      CGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGT                                                         <  SRR4302545.5298839/94‑1 (MQ=60)
                                       GGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTT                                                        >  SRR4302545.7218357/1‑94 (MQ=60)
                                        GTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTT                                                       <  SRR4302545.1699785/94‑1 (MQ=60)
                                        GTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTT                                                       >  SRR4302545.4492253/1‑94 (MQ=60)
                                        GTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTT                                                       <  SRR4302545.10759056/94‑1 (MQ=60)
                                         TCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTA                                                      >  SRR4302545.4975789/1‑94 (MQ=60)
                                         TCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTA                                                      >  SRR4302545.5197681/1‑94 (MQ=60)
                                         TCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTA                                                      <  SRR4302545.9517467/94‑1 (MQ=60)
                                         TCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTA                                                      <  SRR4302545.3442233/94‑1 (MQ=60)
                                          CATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAG                                                     <  SRR4302545.1309686/94‑1 (MQ=60)
                                          CATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAG                                                     >  SRR4302545.3333875/1‑94 (MQ=60)
                                          CATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAG                                                     >  SRR4302545.9790236/1‑94 (MQ=60)
                                          CATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAG                                                     >  SRR4302545.1176127/1‑94 (MQ=60)
                                           ATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGT                                                    <  SRR4302545.3876902/94‑1 (MQ=60)
                                           ATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGT                                                    >  SRR4302545.6411985/1‑94 (MQ=60)
                                            TTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTC                                                   <  SRR4302545.6597309/94‑1 (MQ=60)
                                             TGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCT                                                  >  SRR4302545.10390772/1‑94 (MQ=60)
                                             TGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCT                                                  <  SRR4302545.6942441/94‑1 (MQ=60)
                                              GGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTG                                                 <  SRR4302545.2538229/94‑1 (MQ=60)
                                              GGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTG                                                 <  SRR4302545.263779/94‑1 (MQ=60)
                                               GGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGC                                                >  SRR4302545.3338157/1‑94 (MQ=60)
                                                GGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAACCATTTGGGGTTTAGTCTGCT                                               <  SRR4302545.5914993/94‑1 (MQ=60)
                                                GGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCT                                               <  SRR4302545.2505072/94‑1 (MQ=60)
                                                 GTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTT                                              >  SRR4302545.4906033/1‑94 (MQ=60)
                                                 GTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTT                                              <  SRR4302545.9418407/94‑1 (MQ=60)
                                                 GTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTT                                              <  SRR4302545.2625058/94‑1 (MQ=60)
                                                  TTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTT                                             >  SRR4302545.3698005/1‑94 (MQ=60)
                                                  TTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGGCTGCTTT                                             >  SRR4302545.5584084/1‑94 (MQ=60)
                                                   TAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTT                                            <  SRR4302545.4983352/94‑1 (MQ=60)
                                                   TAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTT                                            <  SRR4302545.640561/94‑1 (MQ=60)
                                                    AAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTT                                           <  SRR4302545.7636899/94‑1 (MQ=60)
                                                      GGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAA                                         >  SRR4302545.3669090/1‑94 (MQ=60)
                                                       GTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAAT                                        <  SRR4302545.9345688/94‑1 (MQ=60)
                                                       GTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAAT                                        >  SRR4302545.1747156/1‑94 (MQ=60)
                                                        TTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATC                                       <  SRR4302545.2780409/94‑1 (MQ=60)
                                                        TTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATC                                       >  SRR4302545.10574297/1‑94 (MQ=60)
                                                        TTGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATC                                       <  SRR4302545.3447004/94‑1 (MQ=60)
                                                         TGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCC                                      >  SRR4302545.1132613/1‑94 (MQ=60)
                                                         TGTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGGTTAGTCTGCTTTTTAATCC                                      >  SRR4302545.10592265/1‑94 (MQ=60)
                                                         TGTAACAAGAGGATTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCC                                      <  SRR4302545.9912760/94‑1 (MQ=60)
                                                          GTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCA                                     <  SRR4302545.8059135/94‑1 (MQ=60)
                                                          GTAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCA                                     >  SRR4302545.7124466/1‑94 (MQ=60)
                                                           TAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCAT                                    <  SRR4302545.5482487/94‑1 (MQ=60)
                                                           TAACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCAT                                    >  SRR4302545.2657685/1‑94 (MQ=60)
                                                            AACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATA                                   <  SRR4302545.3751988/94‑1 (MQ=60)
                                                            AACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGGCAGCGTTTTAAGCCATA                                   >  SRR4302545.9694618/1‑94 (MQ=60)
                                                             ACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATAT                                  <  SRR4302545.300969/94‑1 (MQ=60)
                                                             ACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATAT                                  <  SRR4302545.8794437/94‑1 (MQ=60)
                                                             ACAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATAT                                  <  SRR4302545.5706345/94‑1 (MQ=60)
                                                              CAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATT                                 >  SRR4302545.6858131/1‑94 (MQ=60)
                                                              CAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATT                                 >  SRR4302545.1825757/1‑94 (MQ=60)
                                                              CAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATT                                 <  SRR4302545.6421558/94‑1 (MQ=60)
                                                              CAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATT                                 >  SRR4302545.463375/1‑94 (MQ=60)
                                                              CAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATT                                 >  SRR4302545.9487099/1‑94 (MQ=60)
                                                              CAAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATT                                 >  SRR4302545.9487104/1‑94 (MQ=60)
                                                               AAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTA                                <  SRR4302545.4052302/94‑1 (MQ=60)
                                                               AAGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTA                                >  SRR4302545.7250571/1‑94 (MQ=60)
                                                                AGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTAT                               >  SRR4302545.3153173/1‑94 (MQ=60)
                                                                AGAGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTAC                               <  SRR4302545.10380787/94‑1 (MQ=60)
                                                                  AGGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTG                             <  SRR4302545.2753324/94‑1 (MQ=60)
                                                                  AGGCGAATTTGCACACAATAACCACCGCGAATAGGTCTAAAGGAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTG                             >  SRR4302545.9088694/1‑94 (MQ=60)
                                                                   GGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGG                            <  SRR4302545.1499666/94‑1 (MQ=60)
                                                                   GGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGG                            >  SRR4302545.8191856/1‑94 (MQ=60)
                                                                   GGCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGG                            >  SRR4302545.597378/1‑94 (MQ=60)
                                                                    GCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGA                           <  SRR4302545.5887357/94‑1 (MQ=60)
                                                                    GCGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGA                           <  SRR4302545.2269499/94‑1 (MQ=60)
                                                                     CGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAT                          >  SRR4302545.7757224/1‑94 (MQ=60)
                                                                     CGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAT                          <  SRR4302545.8102080/94‑1 (MQ=60)
                                                                     CGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAT                          <  SRR4302545.6369790/94‑1 (MQ=60)
                                                                     CGTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGAT                          <  SRR4302545.10317212/94‑1 (MQ=60)
                                                                      GTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATT                         >  SRR4302545.6781039/1‑94 (MQ=60)
                                                                      GTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATT                         >  SRR4302545.1106792/1‑94 (MQ=60)
                                                                      GTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATT                         >  SRR4302545.471344/1‑94 (MQ=60)
                                                                      GTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATT                         >  SRR4302545.4203688/1‑94 (MQ=60)
                                                                      GTATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATT                         >  SRR4302545.5502747/1‑94 (MQ=60)
                                                                       TATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTT                        >  SRR4302545.9654147/1‑94 (MQ=60)
                                                                       TATTAGCACACAATAACCACTGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTT                        <  SRR4302545.6693555/94‑1 (MQ=60)
                                                                        ATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTT                       <  SRR4302545.8694588/94‑1 (MQ=60)
                                                                        ATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTT                       <  SRR4302545.959234/94‑1 (MQ=60)
                                                                        ATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTT                       <  SRR4302545.1635363/94‑1 (MQ=60)
                                                                        ATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTT                       >  SRR4302545.6205940/1‑94 (MQ=60)
                                                                        ATTTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTT                       >  SRR4302545.6263921/1‑94 (MQ=60)
                                                                         TTTGCAGACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTGTAATCCATATTCCTGGATTTTT                      <  SRR4302545.7236498/94‑1 (MQ=60)
                                                                          TTGCACACAATACCCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTG                     <  SRR4302545.694420/94‑1 (MQ=60)
                                                                          TTGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTG                     <  SRR4302545.680206/94‑1 (MQ=60)
                                                                           TGCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGT                    <  SRR4302545.10755312/94‑1 (MQ=60)
                                                                            GCACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTT                   <  SRR4302545.4412676/94‑1 (MQ=60)
                                                                            GCACACAATAACCACCGCGAATAGGTCTAAAGCAAAACATAAGAAATATTTGGGGTTTGGTCTGCTTTTTAATCCATATTACTGGCTTTTTGTT                   >  SRR4302545.1208932/1‑94 (MQ=60)
                                                                              ACACAATAACCACCGCGACTAGGTCTAAAGTAAAACATAAGAAATATTTGGGGCTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAA                 >  SRR4302545.5910775/1‑94 (MQ=60)
                                                                              ACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAA                 <  SRR4302545.4106767/94‑1 (MQ=60)
                                                                              ACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAA                 >  SRR4302545.8498583/1‑94 (MQ=60)
                                                                              ACACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAA                 >  SRR4302545.10848091/1‑94 (MQ=60)
                                                                              ACACAATAACCACCGCGAATAGGACTAGAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAA                 <  SRR4302545.1889289/94‑1 (MQ=60)
                                                                              ACACAATAACCACCGCGAAGAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAA                 <  SRR4302545.9770389/94‑1 (MQ=60)
                                                                               CACAATAACCACCGTGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAG                <  SRR4302545.9915803/94‑1 (MQ=60)
                                                                               CACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAG                <  SRR4302545.7823749/94‑1 (MQ=60)
                                                                               CACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAG                >  SRR4302545.4356501/1‑94 (MQ=60)
                                                                                ACAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGC               <  SRR4302545.7917016/94‑1 (MQ=60)
                                                                                 CAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCC              <  SRR4302545.5317971/94‑1 (MQ=60)
                                                                                 CAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCC              >  SRR4302545.1014304/1‑94 (MQ=60)
                                                                                 CAATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCC              >  SRR4302545.8677458/1‑94 (MQ=60)
                                                                                  AATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCG             >  SRR4302545.2964827/1‑94 (MQ=60)
                                                                                  AATAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCG             <  SRR4302545.2214236/94‑1 (MQ=60)
                                                                                    TAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTT           <  SRR4302545.5808839/94‑1 (MQ=60)
                                                                                    TAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTT           >  SRR4302545.2380308/1‑94 (MQ=60)
                                                                                    TAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTT           <  SRR4302545.9306629/94‑1 (MQ=60)
                                                                                    TAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTT           <  SRR4302545.9306635/94‑1 (MQ=60)
                                                                                    TAACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTAGGGCTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTT           >  SRR4302545.6251061/1‑94 (MQ=60)
                                                                                     AACCACCGGGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTT          >  SRR4302545.414605/1‑94 (MQ=60)
                                                                                     AACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTT          >  SRR4302545.2335746/1‑94 (MQ=60)
                                                                                      ACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTA         >  SRR4302545.2048582/1‑94 (MQ=60)
                                                                                      ACCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTA         >  SRR4302545.7407160/1‑94 (MQ=60)
                                                                                       CCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAA        >  SRR4302545.6203958/1‑94 (MQ=60)
                                                                                       CCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAA        <  SRR4302545.2405325/94‑1 (MQ=60)
                                                                                       CCACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAA        >  SRR4302545.3321884/1‑94 (MQ=60)
                                                                                        CACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAAC       <  SRR4302545.825787/94‑1 (MQ=60)
                                                                                        CACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAAC       >  SRR4302545.7655071/1‑94 (MQ=60)
                                                                                        CACCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAAC       <  SRR4302545.8413279/94‑1 (MQ=60)
                                                                                          CCGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGG     <  SRR4302545.7515275/94‑1 (MQ=60)
                                                                                           CGCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGC    >  SRR4302545.2132019/1‑94 (MQ=60)
                                                                                            GCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCG   >  SRR4302545.9645705/1‑94 (MQ=60)
                                                                                            GCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCG   <  SRR4302545.9768772/94‑1 (MQ=60)
                                                                                            GCGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCG   <  SRR4302545.3925563/94‑1 (MQ=60)
                                                                                             |                                                                                             
TTTATCAAATAAACTCATGGTGTCGCTCTCCCGAAAATCGGTCATTGGGGTTAAGGTTGTAACAAGAGGCGTATTTGCACACAATAACCACCGTGAATAGGTCTAAAGTAAAACATAAGAAATATTTGGGGTTTAGTCTGCTTTTTAATCCATATTACTGGATTTTTGTTAAGCCGTTTAACGGCGT  >  NC_000913/4439736‑4439922

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑