Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,608,595 2 bp→GC intergenic (+23/‑369) prfC → / → osmY peptide chain release factor RF‑3/OsmY

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,608,5950CG100.0% 1696.0 / NA 495intergenic (+23/‑370)prfC/osmYpeptide chain release factor RF‑3/OsmY
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (234/261);  total (234/261)
*NC_0009134,608,5960GC100.0% 1730.3 / NA 495intergenic (+24/‑369)prfC/osmYpeptide chain release factor RF‑3/OsmY
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (234/261);  total (234/261)

Only 100 of 507 total aligned reads displayed.

GTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTACGCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATAT  >  NC_000913/4608507‑4608683
                                                                                        ||                                                                                       
gTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCt                                                                                     <  2:7826603/94‑1 (MQ=255)
gTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCt                                                                                     <  1:1640397/94‑1 (MQ=255)
 tCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTg                                                                                    <  1:7897842/94‑1 (MQ=255)
   aaCCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTgcg                                                                                  <  2:6837006/94‑1 (MQ=255)
    aCCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTgcgc                                                                                 >  1:3455677/1‑94 (MQ=255)
      cTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGccc                                                                               >  1:6597684/1‑94 (MQ=255)
       tGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCt                                                                              >  2:3929195/1‑94 (MQ=255)
       tGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCt                                                                              >  2:7674399/1‑94 (MQ=255)
       tGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCt                                                                              >  1:2447865/1‑94 (MQ=255)
        gcgcCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTg                                                                             <  2:3181252/94‑1 (MQ=255)
         cgcCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGt                                                                            >  2:5333621/1‑94 (MQ=255)
           ccTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCa                                                                          <  1:193087/94‑1 (MQ=255)
           ccTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCa                                                                          >  2:9632447/1‑94 (MQ=255)
             tGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAAt                                                                        <  2:1634172/94‑1 (MQ=255)
             tGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAAt                                                                        <  2:5119486/94‑1 (MQ=255)
             tGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAAt                                                                        >  1:3874356/1‑94 (MQ=255)
              ggCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAAtt                                                                       <  2:8169022/94‑1 (MQ=255)
               gCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAAttt                                                                      <  2:2961544/94‑1 (MQ=255)
               gCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAAttt                                                                      >  2:4937852/1‑94 (MQ=255)
                cacaGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTc                                                                     >  1:9739496/1‑94 (MQ=255)
                cacaGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTc                                                                     >  2:6797878/1‑94 (MQ=255)
                 acaGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTcc                                                                    >  1:2339776/1‑94 (MQ=255)
                  caGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTccc                                                                   >  2:10022613/1‑94 (MQ=255)
                   aGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCcct                                                                  >  1:8010972/1‑94 (MQ=255)
                   aGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCcct                                                                  <  2:4325408/94‑1 (MQ=255)
                   aGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCcct                                                                  <  1:1310913/94‑1 (MQ=255)
                    ggAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCcctt                                                                 >  1:1410124/1‑94 (MQ=255)
                      aaCGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttcc                                                               >  1:7125449/1‑94 (MQ=255)
                        cGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttcctt                                                             <  2:7398609/94‑1 (MQ=255)
                        cGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCccttcctt                                                             >  1:5617568/1‑94 (MQ=255)
                         gTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCtta                                                            <  1:3227430/94‑1 (MQ=255)
                           tATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCttatt                                                          >  2:6543238/1‑94 (MQ=255)
                            aTCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCCATTTCCCTTCCttacta                                                         >  2:8004344/1‑94 (MQ=255)
                            aTCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCttatta                                                         <  2:1927679/94‑1 (MQ=255)
                            aTCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCttatta                                                         >  1:2860103/1‑94 (MQ=255)
                              ccGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGc                                                       >  2:7281067/1‑94 (MQ=255)
                              ccGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGc                                                       >  2:5493160/1‑94 (MQ=255)
                              ccGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGc                                                       <  1:2586238/94‑1 (MQ=255)
                                ggACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCg                                                     >  2:6252424/1‑94 (MQ=255)
                                  ccGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCt                                                   <  2:9181942/93‑1 (MQ=255)
                                  aCGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCt                                                   <  1:2085259/94‑1 (MQ=255)
                                   cGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCtt                                                  <  1:4957148/94‑1 (MQ=255)
                                     ttCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTAc                                                <  1:10581652/94‑1 (MQ=255)
                                      tCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACg                                               <  1:1005445/94‑1 (MQ=255)
                                       cAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACgg                                              >  2:10529929/1‑94 (MQ=255)
                                        aGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGTTTACGGa                                             >  2:2730911/1‑94 (MQ=255)
                                        aGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGa                                             >  1:9898409/1‑94 (MQ=255)
                                         gTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGaa                                            >  2:6356093/1‑94 (MQ=255)
                                           tCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATg                                          >  2:426706/1‑94 (MQ=255)
                                           tCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATg                                          >  1:6153035/1‑94 (MQ=255)
                                            ccactaGACCCTCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGt                                         >  1:9343839/1‑94 (MQ=255)
                                            ccaccaGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGt                                         >  2:8385733/1‑94 (MQ=255)
                                            ccaccaGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGt                                         <  1:3070007/94‑1 (MQ=255)
                                            ccaccaGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGt                                         <  2:9382054/94‑1 (MQ=255)
                                             caccaGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGtt                                        <  2:147816/94‑1 (MQ=255)
                                              accaGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTc                                       <  2:974088/94‑1 (MQ=255)
                                                 aGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTa                                    >  2:1953442/1‑94 (MQ=255)
                                                 aGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTa                                    <  2:1222637/94‑1 (MQ=255)
                                                  gACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTaa                                   <  2:7551346/94‑1 (MQ=255)
                                                   aCCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTaaa                                  >  1:9174924/1‑94 (MQ=255)
                                                    cccGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTaaaa                                 >  1:10492702/1‑94 (MQ=255)
                                                     ccGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAAc                                >  1:6958603/1‑94 (MQ=255)
                                                     ccGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAAc                                <  1:8631167/94‑1 (MQ=255)
                                                     ccGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAAc                                >  1:8496565/1‑94 (MQ=255)
                                                      cgcgAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACa                               >  2:3765501/1‑94 (MQ=255)
                                                       gcgAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACAt                              >  1:6787607/1‑94 (MQ=255)
                                                       gcgAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACAt                              <  2:604823/94‑1 (MQ=255)
                                                       gcgAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACAt                              <  2:5256224/94‑1 (MQ=255)
                                                         gAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTc                            >  1:5983131/1‑94 (MQ=255)
                                                         gAGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTc                            >  2:102321/1‑94 (MQ=255)
                                                          aGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCa                           >  1:10204329/1‑94 (MQ=255)
                                                          aGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCa                           >  2:592484/1‑94 (MQ=255)
                                                          aGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCa                           <  2:4711481/94‑1 (MQ=255)
                                                          aGCATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCa                           <  2:9029292/94‑1 (MQ=255)
                                                            cATTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACt                         <  1:745183/94‑1 (MQ=255)
                                                             aTTAATTCTTGTCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCACTTTCCCTTCCTTATTAGCAGCTTACGGAATGTTCTTCAATCATTCACtt                        >  1:5101356/1‑94 (MQ=255)
                                                             aTTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACtt                        >  2:4074032/1‑94 (MQ=255)
                                                             aTTAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACtt                        <  1:5248463/94‑1 (MQ=255)
                                                               tAATTCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACtttt                      <  2:2323834/94‑1 (MQ=255)
                                                                  ttCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCt                   >  2:3517939/1‑94 (MQ=255)
                                                                  ttCTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCt                   >  1:4161080/1‑94 (MQ=255)
                                                                    cTTGCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTa                 >  1:7324982/1‑94 (MQ=255)
                                                                       gCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGt              >  1:4711856/1‑94 (MQ=255)
                                                                       gCCTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGt              <  2:2396046/94‑1 (MQ=255)
                                                                        ccTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGtt             >  1:4471290/1‑94 (MQ=255)
                                                                         cTCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGttt            >  1:5801015/1‑94 (MQ=255)
                                                                          tCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGtttt           <  2:5713314/94‑1 (MQ=255)
                                                                          tCCAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGtttt           >  2:1834169/1‑94 (MQ=255)
                                                                           ccAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTc          <  1:827549/94‑1 (MQ=255)
                                                                           ccAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTc          <  1:9541677/94‑1 (MQ=255)
                                                                            cAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCg         >  1:7642757/1‑94 (MQ=255)
                                                                            cAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCg         <  1:426706/94‑1 (MQ=255)
                                                                            cAGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCg         <  1:1718291/94‑1 (MQ=255)
                                                                             aGGGCGCGGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGc        >  2:283934/1‑94 (MQ=255)
                                                                                gcgcGGTAGCCGCTGCCCCCTGTCAATTGCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGa     <  1:8925211/94‑1 (MQ=255)
                                                                                 cgcgGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGat    >  1:4806915/1‑94 (MQ=255)
                                                                                 cgcgGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGat    <  1:1834169/94‑1 (MQ=255)
                                                                                  gcgGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGata   >  2:8531434/1‑94 (MQ=255)
                                                                                  gcgGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGata   <  2:1092783/94‑1 (MQ=255)
                                                                                  gcgGTAGCCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTACGTTTTCGCTGata   >  1:4425332/1‑94 (MQ=255)
                                                                                        ||                                                                                       
GTCAACCTGCGCCTGGCACAGGAACGTTATCCGGACGTTCAGTTCCACCAGACCCGCGAGCATTAATTCTTGCCTCCAGGGCGCGGTACGCGCTGCGCCCTGTCAATTTCCCTTCCTTATTAGCCGCTTACGGAATGTTCTTAAAACATTCACTTTTGCTTATGTTTTCGCTGATAT  >  NC_000913/4608507‑4608683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 297 total aligned reads displayed.
GGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTAGAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCAG  >  NC_000913/4614145‑4614331
                                                                                             |                                                                                             
GGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTAT                                                                                               >  SRR4302545.3348883/1‑94 (MQ=60)
GGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTAT                                                                                               <  SRR4302545.2347926/94‑1 (MQ=60)
 GCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATA                                                                                              >  SRR4302545.417593/1‑94 (MQ=60)
 GCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATA                                                                                              <  SRR4302545.4374940/94‑1 (MQ=60)
  CCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAA                                                                                             <  SRR4302545.10915128/94‑1 (MQ=60)
   CGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAAT                                                                                            >  SRR4302545.1608958/1‑94 (MQ=60)
   CGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAAT                                                                                            <  SRR4302545.7010175/94‑1 (MQ=60)
   CGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTCATAAT                                                                                            <  SRR4302545.5348995/94‑1 (MQ=60)
    GATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATT                                                                                           >  SRR4302545.2862511/1‑94 (MQ=60)
    GATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATT                                                                                           <  SRR4302545.1760297/94‑1 (MQ=60)
     ATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTC                                                                                          <  SRR4302545.3915732/94‑1 (MQ=60)
      TATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCT                                                                                         <  SRR4302545.6770648/94‑1 (MQ=60)
      TATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCT                                                                                         <  SRR4302545.6770650/94‑1 (MQ=60)
       ATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTA                                                                                        >  SRR4302545.4628191/1‑94 (MQ=60)
       ATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTA                                                                                        <  SRR4302545.7447751/94‑1 (MQ=60)
        TTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAA                                                                                       >  SRR4302545.6058166/1‑94 (MQ=60)
        TTGGCGTGCATAAAGGCGTCTGGCAGGGATCTGTCGAGGTAACGCCAGAAACGATTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCCAA                                                                                       >  SRR4302545.6058167/1‑94 (MQ=60)
         TGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAAC                                                                                      <  SRR4302545.7707524/94‑1 (MQ=60)
         TGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAAC                                                                                      <  SRR4302545.7707523/94‑1 (MQ=60)
         TGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAAC                                                                                      <  SRR4302545.3153871/94‑1 (MQ=60)
         TGGCGTGCATAAAGGCGGCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAAC                                                                                      >  SRR4302545.7211592/1‑94 (MQ=60)
          GGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACA                                                                                     >  SRR4302545.3842951/1‑94 (MQ=60)
          GGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACA                                                                                     <  SRR4302545.4849089/94‑1 (MQ=60)
          GGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACA                                                                                     <  SRR4302545.5421430/94‑1 (MQ=60)
          GGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACA                                                                                     <  SRR4302545.703211/94‑1 (MQ=60)
           GCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACAT                                                                                    <  SRR4302545.2806940/94‑1 (MQ=60)
           GCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACAT                                                                                    <  SRR4302545.7659815/94‑1 (MQ=60)
           GCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACAT                                                                                    <  SRR4302545.9260633/94‑1 (MQ=60)
            CGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATA                                                                                   <  SRR4302545.2950898/94‑1 (MQ=60)
            CGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATA                                                                                   >  SRR4302545.1302322/1‑94 (MQ=60)
            CGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGAGCTCGTCTTGTGTTATAATTCTAACATA                                                                                   <  SRR4302545.8037609/94‑1 (MQ=60)
             GTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATAG                                                                                  >  SRR4302545.3734033/1‑94 (MQ=60)
             GTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATAC                                                                                  <  SRR4302545.10559638/94‑1 (MQ=60)
              TGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTAGTCTTGTGTTATAATTCTAACATACG                                                                                 <  SRR4302545.878102/94‑1 (MQ=60)
                CATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGT                                                                               <  SRR4302545.3416497/94‑1 (MQ=60)
                CATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGT                                                                               <  SRR4302545.4885829/94‑1 (MQ=60)
                CATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGT                                                                               >  SRR4302545.2261645/1‑94 (MQ=60)
                CATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGT                                                                               <  SRR4302545.3075641/94‑1 (MQ=60)
                 ATAAAGGCGTCTGGGAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              <  SRR4302545.3332712/94‑1 (MQ=60)
                 ATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              <  SRR4302545.7054593/94‑1 (MQ=60)
                 ATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              >  SRR4302545.2701346/1‑94 (MQ=60)
                 ATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              >  SRR4302545.2439695/1‑94 (MQ=60)
                 ATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              <  SRR4302545.3144671/94‑1 (MQ=60)
                 ATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTT                                                                              <  SRR4302545.2091490/94‑1 (MQ=60)
                 ATAAAGGCGTCTGGCAGGGGTCTGTCGCGGGAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTTTGTTATAATTCTAACATAAGGTT                                                                              >  SRR4302545.1905243/1‑94 (MQ=60)
                  TAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTG                                                                             <  SRR4302545.9056910/94‑1 (MQ=60)
                  TAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTG                                                                             <  SRR4302545.3623547/94‑1 (MQ=60)
                  TAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTG                                                                             <  SRR4302545.9904613/94‑1 (MQ=60)
                   AAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGC                                                                            >  SRR4302545.3031031/1‑94 (MQ=60)
                   AAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGC                                                                            >  SRR4302545.7113814/1‑94 (MQ=60)
                   AAAGGCGTCTGGCAGGGGTCTGTCGAGGTAACGCCAGAAACGGTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCGAACATACGGTTGC                                                                            >  SRR4302545.4508867/1‑94 (MQ=60)
                    AAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCA                                                                           <  SRR4302545.4313926/94‑1 (MQ=60)
                     AGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAA                                                                          <  SRR4302545.5340852/94‑1 (MQ=60)
                      GGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAAA                                                                         >  SRR4302545.489089/1‑94 (MQ=60)
                       GCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACA                                                                        <  SRR4302545.5461185/94‑1 (MQ=60)
                        CGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAA                                                                       <  SRR4302545.4845168/94‑1 (MQ=60)
                         GTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAAC                                                                      <  SRR4302545.8027643/94‑1 (MQ=60)
                         GTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAAC                                                                      >  SRR4302545.1498654/1‑94 (MQ=60)
                         GTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAAC                                                                      <  SRR4302545.7752587/94‑1 (MQ=60)
                          TCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACG                                                                     <  SRR4302545.10277628/94‑1 (MQ=60)
                          TCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACG                                                                     <  SRR4302545.5246924/94‑1 (MQ=60)
                           CTGGCAGGGTTCTGTCGAGAAAAAGCCAGAAACGTTTTATAAGAACATCGATCTCGTCTTGTGTTATAATAATAACATACGGTTGCAAAAACCC                                                                    <  SRR4302545.8323420/94‑1 (MQ=50)
                            TGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACCACGCA                                                                   >  SRR4302545.229307/1‑94 (MQ=60)
                            TGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCA                                                                   >  SRR4302545.10418944/1‑94 (MQ=60)
                            TGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCA                                                                   >  SRR4302545.10587801/1‑94 (MQ=60)
                             GGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCAT                                                                  <  SRR4302545.6488021/94‑1 (MQ=60)
                             GGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCAT                                                                  >  SRR4302545.7032154/1‑94 (MQ=60)
                              GCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATC                                                                 <  SRR4302545.2122580/94‑1 (MQ=60)
                               CAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCC                                                                >  SRR4302545.72385/1‑94 (MQ=60)
                               CAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCA                                                                >  SRR4302545.2722420/1‑94 (MQ=60)
                                AGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCA                                                               >  SRR4302545.357424/1‑94 (MQ=60)
                                AGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCA                                                               >  SRR4302545.5043346/1‑94 (MQ=60)
                                AGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCA                                                               >  SRR4302545.6380576/1‑94 (MQ=60)
                                AGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCA                                                               <  SRR4302545.559966/94‑1 (MQ=60)
                                  GGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATTCGGTTGCAACAACGCATCCAGT                                                             <  SRR4302545.4604185/94‑1 (MQ=60)
                                  GGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGT                                                             >  SRR4302545.2205275/1‑94 (MQ=60)
                                  GGTGCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGT                                                             <  SRR4302545.7045922/94‑1 (MQ=60)
                                    TTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTG                                                           <  SRR4302545.8729387/94‑1 (MQ=60)
                                      CTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCC                                                         >  SRR4302545.3706800/1‑94 (MQ=60)
                                      CTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCC                                                         >  SRR4302545.3135478/1‑94 (MQ=60)
                                      CTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCC                                                         >  SRR4302545.5553786/1‑94 (MQ=60)
                                       TGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCC                                                        >  SRR4302545.7865682/1‑94 (MQ=60)
                                        GTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCC                                                       <  SRR4302545.8240327/94‑1 (MQ=60)
                                        GTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCC                                                       <  SRR4302545.10058928/94‑1 (MQ=60)
                                          CGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAG                                                     >  SRR4302545.6918535/1‑94 (MQ=60)
                                           GAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGG                                                    >  SRR4302545.1143041/1‑94 (MQ=60)
                                           GAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGG                                                    >  SRR4302545.6620133/1‑94 (MQ=60)
                                           GAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGG                                                    <  SRR4302545.2612983/94‑1 (MQ=60)
                                           GAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGG                                                    >  SRR4302545.3550351/1‑94 (MQ=60)
                                            AGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGG                                                   >  SRR4302545.5568518/1‑94 (MQ=60)
                                             GGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTA                                                  <  SRR4302545.1089432/94‑1 (MQ=60)
                                             GGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTA                                                  <  SRR4302545.1344131/94‑1 (MQ=60)
                                             GGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTA                                                  <  SRR4302545.2403176/94‑1 (MQ=60)
                                               TAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGA                                                <  SRR4302545.1137386/94‑1 (MQ=60)
                                               TAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGA                                                >  SRR4302545.7351693/1‑94 (MQ=60)
                                               TAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGA                                                >  SRR4302545.5559551/1‑94 (MQ=60)
                                               TAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGA                                                <  SRR4302545.3571915/94‑1 (MQ=60)
                                               GAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGA                                                <  SRR4302545.4005059/94‑1 (MQ=60)
                                                 ACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACC                                              >  SRR4302545.4316612/1‑94 (MQ=60)
                                                 ACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACC                                              <  SRR4302545.8072535/94‑1 (MQ=60)
                                                  CGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCG                                             <  SRR4302545.4503304/94‑1 (MQ=60)
                                                   GCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGG                                            >  SRR4302545.9241501/1‑94 (MQ=60)
                                                   GCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACAGG                                            >  SRR4302545.7855560/1‑94 (MQ=60)
                                                    CCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGC                                           <  SRR4302545.9556752/94‑1 (MQ=60)
                                                    CCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGC                                           >  SRR4302545.7169833/1‑94 (MQ=60)
                                                     CAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCA                                          >  SRR4302545.3455024/1‑94 (MQ=60)
                                                     CAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCA                                          <  SRR4302545.8820268/94‑1 (MQ=60)
                                                     CAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCA                                          >  SRR4302545.6320737/1‑94 (MQ=60)
                                                      AGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCAT                                         <  SRR4302545.6167537/94‑1 (MQ=60)
                                                      AGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCAT                                         <  SRR4302545.474313/94‑1 (MQ=60)
                                                      AGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCAT                                         >  SRR4302545.10336782/1‑94 (MQ=60)
                                                      AGAAACGTTTTATGCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCAT                                         <  SRR4302545.3510790/94‑1 (MQ=60)
                                                       GAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATC                                        <  SRR4302545.7491763/94‑1 (MQ=60)
                                                       GAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATC                                        >  SRR4302545.5745258/1‑94 (MQ=60)
                                                       GAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATC                                        >  SRR4302545.1895556/1‑94 (MQ=60)
                                                       GAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATC                                        >  SRR4302545.6946270/1‑94 (MQ=60)
                                                        AAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCG                                       >  SRR4302545.8305640/1‑94 (MQ=60)
                                                          ACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCGCCAGGTAGACCGaaagcgat                                     >  SRR4302545.3343909/1‑86 (MQ=60)
                                                          ACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGAT                                     <  SRR4302545.3952377/94‑1 (MQ=60)
                                                          ACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGAT                                     >  SRR4302545.1392204/1‑94 (MQ=60)
                                                          ACGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGAT                                     <  SRR4302545.8585404/94‑1 (MQ=60)
                                                           CGTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATG                                    <  SRR4302545.1811671/94‑1 (MQ=60)
                                                            GTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGT                                   >  SRR4302545.5886254/1‑94 (MQ=60)
                                                            GTTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGT                                   <  SRR4302545.1174081/94‑1 (MQ=60)
                                                             TTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTG                                  <  SRR4302545.3710873/94‑1 (MQ=60)
                                                             TTTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTG                                  >  SRR4302545.3696698/1‑94 (MQ=60)
                                                              TTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGA                                 <  SRR4302545.6719226/94‑1 (MQ=60)
                                                              TTTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGA                                 <  SRR4302545.4260449/94‑1 (MQ=60)
                                                               TTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGAC                                >  SRR4302545.7819629/1‑94 (MQ=60)
                                                               TTATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACAGGCATCGATGTGAC                                >  SRR4302545.5625635/1‑94 (MQ=60)
                                                                TATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACC                               <  SRR4302545.73567/94‑1 (MQ=60)
                                                                TATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACC                               >  SRR4302545.9660057/1‑94 (MQ=60)
                                                                TATTCGAACATCGATCTCGTCTTGTGTTAAAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACC                               <  SRR4302545.8101764/94‑1 (MQ=60)
                                                                 ATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCG                              <  SRR4302545.3985157/94‑1 (MQ=60)
                                                                 ATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCG                              <  SRR4302545.8919012/94‑1 (MQ=60)
                                                                 ATTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCG                              <  SRR4302545.2674342/94‑1 (MQ=60)
                                                                  TTCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGA                             >  SRR4302545.875474/1‑94 (MQ=60)
                                                                   TCGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGAC                            >  SRR4302545.7676323/1‑94 (MQ=60)
                                                                    CGAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAAAAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACG                           <  SRR4302545.2133613/94‑1 (MQ=60)
                                                                     GAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGAGCGGCATCGATGTGACCGACGG                          >  SRR4302545.6414705/1‑94 (MQ=60)
                                                                     GAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGG                          <  SRR4302545.6679892/94‑1 (MQ=60)
                                                                     GAACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGG                          >  SRR4302545.6414707/1‑94 (MQ=60)
                                                                      AACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGT                         >  SRR4302545.8230123/1‑94 (MQ=60)
                                                                       ACATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTA                        >  SRR4302545.4989146/1‑94 (MQ=60)
                                                                        CATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTAC                       <  SRR4302545.6527243/94‑1 (MQ=60)
                                                                        AATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTAC                       <  SRR4302545.6527241/94‑1 (MQ=60)
                                                                         ATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACG                      >  SRR4302545.633596/1‑94 (MQ=60)
                                                                         ATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACG                      >  SRR4302545.9610162/1‑94 (MQ=60)
                                                                         ATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACG                      >  SRR4302545.5942853/1‑94 (MQ=60)
                                                                         ATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACG                      >  SRR4302545.5942854/1‑94 (MQ=60)
                                                                         ATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACG                      <  SRR4302545.6391258/94‑1 (MQ=60)
                                                                         ATCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACG                      >  SRR4302545.1568299/1‑94 (MQ=60)
                                                                          TCGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGCCATCGATGTGACCGACGGTACGT                     >  SRR4302545.7768788/1‑94 (MQ=60)
                                                                           CGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTG                    <  SRR4302545.8931201/94‑1 (MQ=60)
                                                                           CGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTG                    <  SRR4302545.743941/94‑1 (MQ=60)
                                                                           CGATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTA                    <  SRR4302545.1691643/94‑1 (MQ=60)
                                                                            GATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGG                   >  SRR4302545.465669/1‑94 (MQ=60)
                                                                            GATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGG                   <  SRR4302545.1781931/94‑1 (MQ=60)
                                                                             ATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGT                  <  SRR4302545.7676108/94‑1 (MQ=60)
                                                                             ATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGT                  >  SRR4302545.5776114/1‑94 (MQ=60)
                                                                             ATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGG                  >  SRR4302545.6913117/1‑94 (MQ=60)
                                                                             ATCTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGG                  >  SRR4302545.4553094/1‑94 (MQ=60)
                                                                               CTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGG                <  SRR4302545.1014888/94‑1 (MQ=60)
                                                                               CTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGG                >  SRR4302545.3240869/1‑94 (MQ=60)
                                                                               CTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGG                <  SRR4302545.9866212/94‑1 (MQ=60)
                                                                               CTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGG                >  SRR4302545.9510520/1‑94 (MQ=60)
                                                                               CTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGG                <  SRR4302545.10537763/94‑1 (MQ=60)
                                                                               CTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGG                >  SRR4302545.7388648/1‑94 (MQ=60)
                                                                               CTCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGG                >  SRR4302545.4747269/1‑94 (MQ=60)
                                                                                TCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGT               >  SRR4302545.5578549/1‑94 (MQ=60)
                                                                                TCGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGT               >  SRR4302545.1496797/1‑94 (MQ=60)
                                                                                 CGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTA              >  SRR4302545.5207679/1‑94 (MQ=60)
                                                                                 CGTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTA              <  SRR4302545.6524881/94‑1 (MQ=60)
                                                                                  GTCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAA             >  SRR4302545.1005853/1‑94 (MQ=60)
                                                                                   TCTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAA            <  SRR4302545.1218960/94‑1 (MQ=60)
                                                                                    CTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAG           >  SRR4302545.4015692/1‑94 (MQ=60)
                                                                                    CTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAG           >  SRR4302545.8269636/1‑94 (MQ=60)
                                                                                    CTTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAG           >  SRR4302545.1581113/1‑94 (MQ=60)
                                                                                     TTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTCCGTGGTGGTAAAGA          >  SRR4302545.9111724/1‑94 (MQ=60)
                                                                                     TTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGA          >  SRR4302545.5427949/1‑94 (MQ=60)
                                                                                     TTGTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGA          <  SRR4302545.9021636/94‑1 (MQ=60)
                                                                                       GTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAAT        <  SRR4302545.10687444/94‑1 (MQ=60)
                                                                                       GTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAAT        >  SRR4302545.1424851/1‑94 (MQ=60)
                                                                                       GTGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAAT        <  SRR4302545.4110452/94‑1 (MQ=60)
                                                                                        TGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATG       >  SRR4302545.2057402/1‑94 (MQ=60)
                                                                                        TGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATG       >  SRR4302545.550357/1‑94 (MQ=60)
                                                                                        TGTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATG       <  SRR4302545.5871525/94‑1 (MQ=60)
                                                                                         GTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGG      >  SRR4302545.619224/1‑94 (MQ=60)
                                                                                         GTTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGG      >  SRR4302545.8277501/1‑94 (MQ=60)
                                                                                          TTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGT     >  SRR4302545.10397563/1‑94 (MQ=60)
                                                                                          TTATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGT     <  SRR4302545.8598570/94‑1 (MQ=60)
                                                                                          TTATAATTCTAACATACGGGTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGTTGGTAgggaatgag     >  SRR4302545.2692697/1‑85 (MQ=60)
                                                                                            ATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCA   >  SRR4302545.1281976/1‑94 (MQ=60)
                                                                                            ATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCA   <  SRR4302545.2745799/94‑1 (MQ=60)
                                                                                            ATAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGCCA   <  SRR4302545.4977981/94‑1 (MQ=60)
                                                                                             TAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCAG  <  SRR4302545.1978519/94‑1 (MQ=60)
                                                                                             TAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCAG  <  SRR4302545.2357004/94‑1 (MQ=60)
                                                                                             TAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCAG  <  SRR4302545.7614693/94‑1 (MQ=60)
                                                                                             TAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCAG  <  SRR4302545.9188454/94‑1 (MQ=60)
                                                                                             TAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCAG  >  SRR4302545.2677873/1‑94 (MQ=60)
                                                                                             |                                                                                             
GGCCGATATTGGCGTGCATAAAGGCGTCTGGCAGGGTTCTGTCGAGGTAACGCCAGAAACGTTTTATTCGAACATCGATCTCGTCTTGTGTTAGAATTCTAACATACGGTTGCAACAACGCATCCAGTTGCCCCAGGTAGACCGGCATCGATGTGACCGACGGTACGTGGTGGTAAAGAATGGTCAG  >  NC_000913/4614145‑4614331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑