Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACC > NC_000913/519076‑519262
|
ACTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGGAGTGAGTCTGGTGGGA > SRR4302545.1632757/1‑94 (MQ=60)
ACTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGA > SRR4302545.10822505/1‑94 (MQ=60)
CTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGAC > SRR4302545.7983561/1‑94 (MQ=60)
GGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAA > SRR4302545.8903039/1‑94 (MQ=60)
GGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAA > SRR4302545.1834969/1‑94 (MQ=60)
TGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACC < SRR4302545.7817350/94‑1 (MQ=60)
GGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCG > SRR4302545.252048/1‑94 (MQ=60)
GGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCG < SRR4302545.3272285/94‑1 (MQ=60)
GCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCT < SRR4302545.2453620/94‑1 (MQ=60)
GGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTA < SRR4302545.8905271/94‑1 (MQ=60)
CGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTA > SRR4302545.1105205/1‑94 (MQ=60)
GAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTAC > SRR4302545.4607523/1‑94 (MQ=60)
GAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTAC > SRR4302545.7372750/1‑94 (MQ=60)
GAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTAC < SRR4302545.4311379/94‑1 (MQ=60)
AGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACA < SRR4302545.942552/94‑1 (MQ=60)
GTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACAT < SRR4302545.6923957/94‑1 (MQ=60)
GTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACAT < SRR4302545.694211/94‑1 (MQ=60)
TCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATA < SRR4302545.2533787/94‑1 (MQ=60)
TCGGAATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATA < SRR4302545.7464931/94‑1 (MQ=60)
CGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAA > SRR4302545.7161643/1‑94 (MQ=60)
CGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAA > SRR4302545.1827990/1‑94 (MQ=60)
CGGGATCGGGAAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGCGAGTCTGGTGGGGCAACCGCTACATAA > SRR4302545.7338044/1‑94 (MQ=60)
GGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAAT > SRR4302545.6507480/1‑94 (MQ=60)
GGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAAT > SRR4302545.2538615/1‑94 (MQ=60)
GGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAAT > SRR4302545.9326938/1‑94 (MQ=60)
GGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAAT < SRR4302545.10700862/94‑1 (MQ=60)
GGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAAT > SRR4302545.8646488/1‑94 (MQ=60)
GGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGACTGGTGGGACAACCCCTACATAAT > SRR4302545.6103567/1‑94 (MQ=60)
GGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGCAGTGAGTCTGGTGGGACAACCGCTACATAATA > SRR4302545.5555420/1‑94 (MQ=60)
GATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATAT < SRR4302545.815432/94‑1 (MQ=60)
GATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATAT < SRR4302545.3824446/94‑1 (MQ=60)
GATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATAT > SRR4302545.4890956/1‑94 (MQ=60)
ATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATG > SRR4302545.7174328/1‑94 (MQ=60)
TCGGTTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGG < SRR4302545.6971171/94‑1 (MQ=60)
TCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGG > SRR4302545.6999102/1‑94 (MQ=60)
TCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGG < SRR4302545.10918504/94‑1 (MQ=60)
CGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGA < SRR4302545.9404150/94‑1 (MQ=60)
CGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGA > SRR4302545.10228529/1‑94 (MQ=60)
GGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGAC > SRR4302545.7135143/1‑94 (MQ=60)
GGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGAC < SRR4302545.4293913/94‑1 (MQ=60)
GGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACG > SRR4302545.4432156/1‑94 (MQ=60)
GGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACG > SRR4302545.2679103/1‑94 (MQ=60)
TAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAA > SRR4302545.443048/1‑94 (MQ=60)
AGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGA > SRR4302545.6686093/1‑94 (MQ=60)
GTCAGCCTTGCTGGCGATCATCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAA < SRR4302545.1224196/94‑1 (MQ=60)
GTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAA < SRR4302545.4538239/94‑1 (MQ=60)
GTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAA < SRR4302545.3794370/94‑1 (MQ=60)
GTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAA > SRR4302545.5038739/1‑94 (MQ=60)
GCCAACCTTGCTGGCGATCCTCCGCGGGCTTGATGACGGTAGCAGTGGCGAAGTGATTGGGGTGGGACAACCGCTACATAATATGGACGAAGAA < SRR4302545.8884054/94‑1 (MQ=60)
CAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGC < SRR4302545.849323/94‑1 (MQ=60)
CAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGC > SRR4302545.53069/1‑94 (MQ=60)
CAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGC < SRR4302545.2695435/94‑1 (MQ=60)
AACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCG < SRR4302545.4779782/94‑1 (MQ=60)
AACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCG < SRR4302545.5448956/94‑1 (MQ=60)
AACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCG < SRR4302545.237582/94‑1 (MQ=60)
AACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCG < SRR4302545.2570762/94‑1 (MQ=60)
ACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGC > SRR4302545.536173/1‑94 (MQ=60)
ACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGC < SRR4302545.3092415/94‑1 (MQ=60)
CCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCG > SRR4302545.2359966/1‑94 (MQ=60)
CCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCG < SRR4302545.8285710/94‑1 (MQ=60)
CCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCG < SRR4302545.2630518/94‑1 (MQ=60)
CTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGG < SRR4302545.10356697/94‑1 (MQ=60)
CTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGG > SRR4302545.6134224/1‑94 (MQ=60)
CTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGG < SRR4302545.5209832/94‑1 (MQ=60)
TTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGG < SRR4302545.6301106/94‑1 (MQ=60)
GCTGGCGATCCTCGCGGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCA < SRR4302545.10275180/94‑1 (MQ=60)
CTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAA > SRR4302545.4080641/1‑94 (MQ=60)
CTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAA > SRR4302545.5594927/1‑94 (MQ=60)
TGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAA > SRR4302545.8045474/1‑94 (MQ=60)
GGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAG > SRR4302545.10356194/1‑94 (MQ=60)
CGATCCTCGCCGGGATTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACACCCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTT < SRR4302545.6459424/94‑1 (MQ=60)
GATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTG > SRR4302545.10429547/1‑94 (MQ=60)
ATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGC < SRR4302545.7591353/94‑1 (MQ=60)
TCGTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCG < SRR4302545.2729421/94‑1 (MQ=60)
TCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCG > SRR4302545.1794234/1‑94 (MQ=60)
TCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGCACGAAGAAGCGCGGGCAAAGTTGCG < SRR4302545.4052654/94‑1 (MQ=60)
TCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCG > SRR4302545.790873/1‑94 (MQ=60)
CTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCG < SRR4302545.3551967/94‑1 (MQ=60)
CTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCG > SRR4302545.2408904/1‑94 (MQ=60)
CGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCG > SRR4302545.741947/1‑94 (MQ=60)
CGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCG > SRR4302545.2450899/1‑94 (MQ=60)
CGCCGGGATTGATGACGGCAGCAGTTGCGAAGTGAGTCTGGTAGGGCAACCGCTACCTACTATGGACGAAGAAGCGCGGGCTAAGTTGCGCGCG > SRR4302545.741946/1‑94 (MQ=60)
GCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGA < SRR4302545.2972059/94‑1 (MQ=60)
GCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGA > SRR4302545.10020762/1‑94 (MQ=60)
CGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAG > SRR4302545.4102393/1‑94 (MQ=60)
CGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAG < SRR4302545.8755922/94‑1 (MQ=60)
CGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAG < SRR4302545.7752580/94‑1 (MQ=60)
GGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGC < SRR4302545.10270259/94‑1 (MQ=60)
GGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCA < SRR4302545.2774417/94‑1 (MQ=60)
GGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCA < SRR4302545.5592205/94‑1 (MQ=60)
GGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCA < SRR4302545.8915418/94‑1 (MQ=60)
GCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCAC < SRR4302545.1903009/94‑1 (MQ=60)
GCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATAGGGACGAAGAAGCGCGGTCAAAGTGGCGCGCGAAGCGC < SRR4302545.1903008/94‑1 (MQ=60)
CTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACG > SRR4302545.7968468/1‑94 (MQ=60)
CTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACG > SRR4302545.7366170/1‑94 (MQ=60)
CTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACG < SRR4302545.7301784/94‑1 (MQ=60)
CTTGATGACGGCAGCAGTGGCGAAGGGAGTCTGGGGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGGTGCACGGGAAGCACG > SRR4302545.7663307/1‑94 (MQ=60)
TTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGT < SRR4302545.2093213/94‑1 (MQ=60)
TGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTC < SRR4302545.3993179/94‑1 (MQ=60)
TGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTC < SRR4302545.10699969/94‑1 (MQ=60)
GATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCG < SRR4302545.6534397/94‑1 (MQ=60)
ATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGG < SRR4302545.5710445/94‑1 (MQ=60)
ATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGG < SRR4302545.60364/94‑1 (MQ=60)
ATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGG < SRR4302545.6531158/94‑1 (MQ=60)
ATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGG < SRR4302545.6531157/94‑1 (MQ=60)
TGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGC > SRR4302545.3121077/1‑94 (MQ=60)
TGACGGCAGCAGTGGCGAAGGGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGAGCGGGCAAAGTTGCGCGCGAAacactgcggt > SRR4302545.3121078/1‑84 (MQ=60)
GACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCT > SRR4302545.5478540/1‑94 (MQ=60)
GACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCT > SRR4302545.2910181/1‑94 (MQ=60)
GACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCT < SRR4302545.3774837/94‑1 (MQ=60)
GACAGAAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCT < SRR4302545.6489533/94‑1 (MQ=60)
ACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTT < SRR4302545.3511727/94‑1 (MQ=60)
TGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTT > SRR4302545.6600267/1‑94 (MQ=60)
CGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTT < SRR4302545.1360692/94‑1 (MQ=60)
CGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTT < SRR4302545.8805074/94‑1 (MQ=60)
GGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTG > SRR4302545.9358543/1‑94 (MQ=60)
GGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTG < SRR4302545.4100004/94‑1 (MQ=60)
GGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTG < SRR4302545.8136531/94‑1 (MQ=60)
GGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTG < SRR4302545.10050619/94‑1 (MQ=60)
GGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTG < SRR4302545.6497845/94‑1 (MQ=60)
GGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTG < SRR4302545.6401147/94‑1 (MQ=60)
GCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGT > SRR4302545.752916/1‑94 (MQ=60)
GCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGT < SRR4302545.3661033/94‑1 (MQ=60)
GCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGT < SRR4302545.7004192/94‑1 (MQ=60)
GCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGT > SRR4302545.8940431/1‑94 (MQ=60)
TAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTT > SRR4302545.3332110/1‑94 (MQ=60)
CAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTT > SRR4302545.5356841/1‑94 (MQ=60)
CAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTT < SRR4302545.9975899/94‑1 (MQ=60)
AGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTT > SRR4302545.1269902/1‑94 (MQ=60)
GCAGTGGTGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTT < SRR4302545.10720411/94‑1 (MQ=60)
CAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTT < SRR4302545.735640/94‑1 (MQ=60)
CAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTT < SRR4302545.6279906/94‑1 (MQ=60)
AGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTC < SRR4302545.7450182/94‑1 (MQ=60)
AGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTC > SRR4302545.1291607/1‑94 (MQ=60)
AGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTC < SRR4302545.1431361/94‑1 (MQ=60)
AGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTC < SRR4302545.3601361/94‑1 (MQ=60)
TGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAG < SRR4302545.5584229/94‑1 (MQ=60)
TGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAATCACGTCGGCTTTGTTTTTCct > SRR4302545.1540780/1‑92 (MQ=60)
GGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGT > SRR4302545.5464400/1‑94 (MQ=60)
GCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTC < SRR4302545.234724/94‑1 (MQ=60)
CGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCA < SRR4302545.10345792/94‑1 (MQ=60)
CGAAGAGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGATGCGCGCGAAGCACGTTGGCTTTGTTTTTCAGTCA > SRR4302545.5240545/1‑94 (MQ=60)
GAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAT > SRR4302545.8609545/1‑94 (MQ=60)
GAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAT > SRR4302545.2630949/1‑94 (MQ=60)
GAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAT < SRR4302545.5109247/94‑1 (MQ=60)
GAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAT > SRR4302545.10615689/1‑94 (MQ=60)
GAAGTGAGTCTGGAGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAT > SRR4302545.7345612/1‑94 (MQ=60)
AAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATT > SRR4302545.1297537/1‑94 (MQ=60)
AAGTGAGTCTGGTGGGACACCCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATT < SRR4302545.2913292/94‑1 (MQ=60)
AGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTT > SRR4302545.9927881/1‑94 (MQ=60)
GTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTA < SRR4302545.2104039/94‑1 (MQ=60)
TGAGTCTGGTGGGACAACCGCTAGATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTAT < SRR4302545.7371925/94‑1 (MQ=60)
GAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATG < SRR4302545.7935745/94‑1 (MQ=60)
AGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGT < SRR4302545.6323567/94‑1 (MQ=60)
AGTCTGGTGGGCCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGT < SRR4302545.3523846/94‑1 (MQ=60)
GTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTT < SRR4302545.6918154/94‑1 (MQ=60)
GTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTT > SRR4302545.2231462/1‑94 (MQ=60)
GTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGATGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTT > SRR4302545.6883281/1‑94 (MQ=60)
TCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTA < SRR4302545.5177316/94‑1 (MQ=60)
CTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAA > SRR4302545.73857/1‑94 (MQ=60)
TGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAAT > SRR4302545.7149826/1‑94 (MQ=60)
GGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATT > SRR4302545.8215952/1‑94 (MQ=60)
GGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATT < SRR4302545.8936828/94‑1 (MQ=60)
TGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCC < SRR4302545.560759/94‑1 (MQ=60)
TGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCC > SRR4302545.10404663/1‑94 (MQ=60)
GGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTGGGCTTTGTTTTTCAGTCATTTATGTTAATTCCT < SRR4302545.7808062/94‑1 (MQ=60)
GGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCT < SRR4302545.1479984/94‑1 (MQ=60)
GGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCT < SRR4302545.7808063/94‑1 (MQ=60)
GGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCT > SRR4302545.4793871/1‑94 (MQ=60)
GGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCT < SRR4302545.3658479/94‑1 (MQ=60)
GGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTCTCAGTCATTTATGTTAATTCCT < SRR4302545.10740203/94‑1 (MQ=60)
GGACAAACGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCACGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTA < SRR4302545.6090621/94‑1 (MQ=60)
GGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTAC < SRR4302545.6469086/94‑1 (MQ=60)
GCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACC > SRR4302545.9502840/1‑94 (MQ=60)
|
ACTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACC > NC_000913/519076‑519262
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
