Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
519,169 |
A→G |
G71G (GGA→GGG) |
ybbA → |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 519,169 | 0 | A | G | 99.6%
| 752.3
/ NA
| 224 | G71G (GGA→GGG) | ybbA | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (103/120); total (103/121) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 237 total aligned reads displayed.
GTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTA > NC_000913/519080‑519260
|
tggGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAAc < 1:2466421/93‑1 (MQ=255)
ggggCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAAc < 2:5044662/92‑1 (MQ=255)
aGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTAc > 1:5169597/1‑93 (MQ=255)
gTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACa > 1:779844/1‑93 (MQ=255)
tCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACat < 1:5939918/93‑1 (MQ=255)
cGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACata < 1:2772826/93‑1 (MQ=255)
cGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACAGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACata > 2:6425234/1‑93 (MQ=255)
gggATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACataa < 2:4948437/93‑1 (MQ=255)
ggATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACataat > 1:5904980/1‑93 (MQ=255)
ggATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACataat > 2:462045/1‑93 (MQ=255)
ggATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACataat > 2:4273450/1‑93 (MQ=255)
ggATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACataat < 2:4343301/93‑1 (MQ=255)
gATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACataata < 2:4578889/93‑1 (MQ=255)
ttCGGGTACGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAatat > 2:6297117/2‑93 (MQ=255)
tCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATg < 2:2108214/93‑1 (MQ=255)
cGGGTAAGTCAGCCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATgg < 1:446190/93‑1 (MQ=255)
gggTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGa > 1:2625146/1‑93 (MQ=255)
gggTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGa < 2:2425796/93‑1 (MQ=255)
aggTAAGTCATCCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCACCCGCTACATAATATGGa < 1:2106529/92‑1 (MQ=255)
ggTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGAc > 2:2650339/1‑93 (MQ=255)
ggTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGAc > 2:1163994/1‑93 (MQ=255)
aaGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACgaa > 1:5633024/1‑93 (MQ=255)
gTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACgaaga < 2:4376393/93‑1 (MQ=255)
gTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACgaaga > 1:4379399/1‑93 (MQ=255)
tCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACgaagaa > 2:2135881/1‑93 (MQ=255)
tCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACgaagaa < 2:222585/93‑1 (MQ=255)
tCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACgaagaa > 2:4100443/1‑93 (MQ=255)
aaCCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAgc > 1:4242207/1‑93 (MQ=255)
cTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGcgcg > 1:3635480/1‑93 (MQ=255)
ttGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCgg < 2:533031/93‑1 (MQ=255)
ttGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGCGAGTCTGGTGGGGCAACCGCTACATCATATGGACCAAGAAGAGCgg > 2:312646/1‑93 (MQ=255)
tGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCaa > 1:581408/1‑93 (MQ=255)
tGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCaa > 1:108820/1‑93 (MQ=255)
gCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAg < 1:1397378/93‑1 (MQ=255)
cGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGt < 1:3374190/93‑1 (MQ=255)
gATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGtt > 2:6248465/1‑93 (MQ=255)
aTCCTCGCCGGGCTTGATGACGGCAGCAGCGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTg > 2:722882/1‑93 (MQ=255)
cTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTgcgc > 2:3581044/1‑93 (MQ=255)
cTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTgcgc > 1:5793708/1‑93 (MQ=255)
cTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTgcgc < 1:3055171/93‑1 (MQ=255)
ccGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGa > 2:168053/1‑93 (MQ=255)
cGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGaa > 1:4883109/1‑93 (MQ=255)
gggCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGGAAAGTTGCGCGCGAAg > 2:1275981/1‑93 (MQ=255)
gggCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAg > 1:870382/1‑93 (MQ=255)
gggCTTGATGACGGCAGCAGTAGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAg > 2:3736907/1‑93 (MQ=255)
ggCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGc < 1:4656259/93‑1 (MQ=255)
ggCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGc > 2:1187264/1‑93 (MQ=255)
ggCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGc > 1:3866382/1‑93 (MQ=255)
gCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCa < 2:3232128/93‑1 (MQ=255)
gCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCa < 2:6037071/93‑1 (MQ=255)
gCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCa < 1:4488108/93‑1 (MQ=255)
gCTTGATGACGGCAGCAGGGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCa < 1:1515294/93‑1 (MQ=255)
ttGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACg < 2:2600366/93‑1 (MQ=255)
ttGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACg < 1:3499407/93‑1 (MQ=255)
tgatgaCGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGt > 1:4573636/1‑93 (MQ=255)
gatgaCGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTc > 2:3630853/1‑93 (MQ=255)
gatgaCGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTc < 1:1039661/93‑1 (MQ=255)
atgaCGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCg > 2:5427817/1‑93 (MQ=255)
aCGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCt > 2:1764810/1‑93 (MQ=255)
aCGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCt < 2:205770/93‑1 (MQ=255)
aCGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCt > 2:3774921/1‑93 (MQ=255)
cGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCtt < 1:808905/93‑1 (MQ=255)
ggCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACGTAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCTAAGCACGTCGGCttt < 2:2877529/93‑1 (MQ=255)
ggCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCATGTCGGCttt < 1:3131303/93‑1 (MQ=255)
gcagcaGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTg < 2:761867/93‑1 (MQ=255)
gcagcaGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTg < 1:6041137/93‑1 (MQ=255)
cagcagTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGt < 1:2281865/93‑1 (MQ=255)
cagcagTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGt < 2:18301/93‑1 (MQ=255)
cagTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGtttt < 1:3797807/93‑1 (MQ=255)
agTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGttttt < 1:5310223/93‑1 (MQ=255)
agTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGttttt < 2:5856172/93‑1 (MQ=255)
tGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCa < 1:5232416/93‑1 (MQ=255)
ggCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAg > 1:1726743/1‑93 (MQ=255)
gCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGt < 1:2422815/93‑1 (MQ=255)
ggatgTGAGTCTGGTGGGGCAATCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTCGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTc < 2:2534649/89‑1 (MQ=255)
gAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCa < 1:426771/93‑1 (MQ=255)
gAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCa < 1:3093344/93‑1 (MQ=255)
gAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCa > 2:3526650/1‑93 (MQ=255)
aaGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAt < 1:6263637/93‑1 (MQ=255)
aaGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAt > 1:1316259/1‑93 (MQ=255)
aaGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAt > 1:5449421/1‑93 (MQ=255)
aGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAtt > 1:3271150/1‑93 (MQ=255)
gTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAttt < 1:1846821/93‑1 (MQ=255)
gTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAttt > 1:3597949/1‑93 (MQ=255)
tGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTa < 2:4194279/93‑1 (MQ=255)
gAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTAt < 1:4455986/93‑1 (MQ=255)
gTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGt > 1:292307/1‑93 (MQ=255)
tCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGtt < 1:6442545/93‑1 (MQ=255)
tCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGtt > 1:3539325/1‑93 (MQ=255)
tCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGtt < 2:1132435/93‑1 (MQ=255)
tCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGtt < 2:1907059/93‑1 (MQ=255)
cTGGTGGGGCACCCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTa > 2:520270/1‑93 (MQ=255)
cTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTa < 2:1533996/93‑1 (MQ=255)
ggtggGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAAt > 2:4786927/1‑93 (MQ=255)
ggtggGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAAt < 2:2759713/93‑1 (MQ=255)
ggtggGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAAt < 2:5153498/93‑1 (MQ=255)
gtggGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGATGCTCGTCGGCTTTGTTTTTCAGTCATTTATGTTAAtt < 2:50165/93‑1 (MQ=255)
gtggGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAAtt > 2:1388399/1‑93 (MQ=255)
tggGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTc < 2:6120440/93‑1 (MQ=255)
ggggCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTcc > 2:5792020/1‑93 (MQ=255)
|
GTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTA > NC_000913/519080‑519260
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACC > NC_000913/519077‑519262
|
CTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGC < SRR4302537.2333645/94‑1 (MQ=60)
CTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGC > SRR4302537.3431093/1‑94 (MQ=60)
GGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGGGAGTCTGGTGGGTCAA > SRR4302537.4429779/1‑94 (MQ=60)
TGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACC < SRR4302537.2483763/94‑1 (MQ=60)
GGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCG < SRR4302537.1758482/94‑1 (MQ=60)
GAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTAC < SRR4302537.3000241/94‑1 (MQ=60)
GAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTAC > SRR4302537.5205198/1‑94 (MQ=60)
GAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTAC < SRR4302537.598376/94‑1 (MQ=60)
AGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACA > SRR4302537.785197/1‑94 (MQ=60)
GTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACAT < SRR4302537.5363815/94‑1 (MQ=60)
GTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACAT > SRR4302537.3605689/1‑94 (MQ=60)
TCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATA < SRR4302537.5980687/94‑1 (MQ=60)
CGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAA < SRR4302537.2792204/94‑1 (MQ=60)
GGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAAT > SRR4302537.5945500/1‑94 (MQ=60)
GGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAAT > SRR4302537.2443776/1‑94 (MQ=60)
GGATCGGGTATGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATA < SRR4302537.680618/94‑1 (MQ=60)
GGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATA > SRR4302537.2950618/1‑94 (MQ=60)
TCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGG < SRR4302537.5786003/94‑1 (MQ=60)
CGGGTAAGTCAGCCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGA < SRR4302537.449286/94‑1 (MQ=60)
CGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGA > SRR4302537.2643540/1‑94 (MQ=60)
CGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGA < SRR4302537.3647027/94‑1 (MQ=60)
AGGTAAGTCATCCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCACCCGCTACATAATATGGAC < SRR4302537.2121378/94‑1 (MQ=60)
GTAAGTCATCCTTGCTGTCGATCCTCGCCGGGCTTGAGGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGA < SRR4302537.470188/94‑1 (MQ=60)
TAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAA > SRR4302537.5671563/1‑94 (MQ=60)
AGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGA > SRR4302537.4409627/1‑94 (MQ=60)
AGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGA > SRR4302537.4422581/1‑94 (MQ=60)
AGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGA > SRR4302537.3433494/1‑94 (MQ=60)
GTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAA > SRR4302537.992824/1‑94 (MQ=60)
TCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAG < SRR4302537.5632875/94‑1 (MQ=60)
CAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGC > SRR4302537.4271700/1‑94 (MQ=60)
CCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCG > SRR4302537.3661086/1‑94 (MQ=60)
CTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGCGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGG < SRR4302537.2372029/94‑1 (MQ=60)
CTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGG < SRR4302537.733985/94‑1 (MQ=60)
TGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGC < SRR4302537.2591126/94‑1 (MQ=60)
GCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCA > SRR4302537.30849/1‑94 (MQ=60)
CTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAA > SRR4302537.109617/1‑94 (MQ=60)
CTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAA > SRR4302537.585391/1‑94 (MQ=60)
CTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAA > SRR4302537.3374757/1‑94 (MQ=60)
CTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAA > SRR4302537.5848388/1‑94 (MQ=60)
TGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAA > SRR4302537.5340271/1‑94 (MQ=60)
GCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGT < SRR4302537.1407118/94‑1 (MQ=60)
CGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTT > SRR4302537.3159415/1‑94 (MQ=60)
CGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTT > SRR4302537.4642076/1‑94 (MQ=60)
CGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTT < SRR4302537.3398102/94‑1 (MQ=60)
CGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTT < SRR4302537.3528421/94‑1 (MQ=60)
GATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTG < SRR4302537.5250567/94‑1 (MQ=60)
CCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGC > SRR4302537.5833426/1‑94 (MQ=60)
CCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGC > SRR4302537.819118/1‑94 (MQ=60)
CTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCG > SRR4302537.4494348/1‑94 (MQ=60)
CTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCG < SRR4302537.3076460/94‑1 (MQ=60)
CGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGGAGCGCGGGCCAAGTTGCGCGCG > SRR4302537.1458344/1‑94 (MQ=60)
GCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGA > SRR4302537.808412/1‑94 (MQ=60)
CCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAA > SRR4302537.4916836/1‑94 (MQ=60)
CGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAG < SRR4302537.5322706/94‑1 (MQ=60)
CGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAG > SRR4302537.876360/1‑94 (MQ=60)
CGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAG > SRR4302537.3636898/1‑94 (MQ=60)
CGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAG > SRR4302537.4568845/1‑94 (MQ=60)
GGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGC > SRR4302537.3893443/1‑94 (MQ=60)
GGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGC > SRR4302537.1404449/1‑94 (MQ=60)
GGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCA < SRR4302537.4854690/94‑1 (MQ=60)
GGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCA < SRR4302537.4688450/94‑1 (MQ=60)
GGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCA < SRR4302537.448834/94‑1 (MQ=60)
GCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCAC < SRR4302537.2914897/94‑1 (MQ=60)
GCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCAC < SRR4302537.4519155/94‑1 (MQ=60)
GCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGCGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGCAGCAC > SRR4302537.3872250/1‑94 (MQ=60)
GCTTGATGACGGCAGCAGGGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCAC < SRR4302537.1525883/94‑1 (MQ=60)
TTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGT > SRR4302537.4605291/1‑94 (MQ=60)
TTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGT < SRR4302537.3524167/94‑1 (MQ=60)
TGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTG > SRR4302537.2344910/1‑94 (MQ=60)
TGAGGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTC < SRR4302537.1877254/94‑1 (MQ=60)
GATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCG < SRR4302537.1046816/94‑1 (MQ=60)
CGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTT > SRR4302537.6319412/1‑94 (MQ=60)
CGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTT < SRR4302537.814455/94‑1 (MQ=60)
CGGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTT < SRR4302537.6219789/94‑1 (MQ=60)
GGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCATGTCGGCTTTG < SRR4302537.3153263/94‑1 (MQ=60)
GGCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTG > SRR4302537.3718627/1‑94 (MQ=60)
GCAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGT < SRR4302537.6082636/94‑1 (MQ=60)
CAGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTT < SRR4302537.2297968/94‑1 (MQ=60)
AGCAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTT < SRR4302537.3185270/94‑1 (MQ=60)
CAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTT < SRR4302537.3824449/94‑1 (MQ=60)
CAGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTT < SRR4302537.3119924/94‑1 (MQ=60)
AGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTC < SRR4302537.5346704/94‑1 (MQ=60)
AGTGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTC < SRR4302537.6257783/94‑1 (MQ=60)
TGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAG < SRR4302537.5268406/94‑1 (MQ=60)
TGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAG > SRR4302537.1738807/1‑94 (MQ=60)
TGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAG < SRR4302537.5952099/94‑1 (MQ=60)
TGGCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAG < SRR4302537.5867897/94‑1 (MQ=60)
GCGAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTC < SRR4302537.2439882/94‑1 (MQ=60)
GAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAT < SRR4302537.3114921/94‑1 (MQ=60)
GAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAT > SRR4302537.1325431/1‑94 (MQ=60)
GAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAT > SRR4302537.5486594/1‑94 (MQ=60)
GAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAT < SRR4302537.5514577/94‑1 (MQ=60)
GAAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCAT < SRR4302537.429734/94‑1 (MQ=60)
AAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATT > SRR4302537.3294236/1‑94 (MQ=60)
AAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATT < SRR4302537.6306634/94‑1 (MQ=60)
AAGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGGCGGCTTTGTTTTTCAGTCATT > SRR4302537.4002198/1‑94 (MQ=60)
AGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTT > SRR4302537.3623309/1‑94 (MQ=60)
AGTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTT > SRR4302537.1131840/1‑94 (MQ=60)
GTGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTA < SRR4302537.1859668/94‑1 (MQ=60)
TGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTAT > SRR4302537.5930994/1‑94 (MQ=60)
TGAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTAT < SRR4302537.4312827/94‑1 (MQ=60)
TGAGTCTGGCGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTAT < SRR4302537.1541286/94‑1 (MQ=60)
GAGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATG < SRR4302537.4486759/94‑1 (MQ=60)
AGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGT < SRR4302537.4101281/94‑1 (MQ=60)
AGTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGT > SRR4302537.294343/1‑94 (MQ=60)
GTCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTT > SRR4302537.3564322/1‑94 (MQ=60)
TCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTA < SRR4302537.1811719/94‑1 (MQ=60)
TCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTA < SRR4302537.6486263/94‑1 (MQ=60)
TCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTA > SRR4302537.1390810/1‑94 (MQ=60)
TCTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTA > SRR4302537.1066627/1‑94 (MQ=60)
CTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAA > SRR4302537.4275316/1‑94 (MQ=60)
CTGGTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAA > SRR4302537.4515150/1‑94 (MQ=60)
GTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTC < SRR4302537.2754607/94‑1 (MQ=60)
GTGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTC > SRR4302537.5065856/1‑94 (MQ=60)
TGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCC < SRR4302537.2154905/94‑1 (MQ=60)
TGGGGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCC > SRR4302537.2610240/1‑94 (MQ=60)
GGCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTAC < SRR4302537.1545999/94‑1 (MQ=60)
GACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGGCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTAC < SRR4302537.3410534/94‑1 (MQ=60)
GCAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACC < SRR4302537.725709/94‑1 (MQ=60)
|
CTGGTGGGCGAGTCGGGATCGGGTAAGTCAACCTTGCTGGCGATCCTCGCCGGGCTTGATGACGGCAGCAGTGGCGAAGTGAGTCTGGTGGGACAACCGCTACATAATATGGACGAAGAAGCGCGGGCAAAGTTGCGCGCGAAGCACGTCGGCTTTGTTTTTCAGTCATTTATGTTAATTCCTACC > NC_000913/519077‑519262
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
