Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AACTCCAGCCCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGCGGAGACAA > NC_000913/2456824‑2457010
|
AACTCCAGCCCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCT < SRR4302545.3401788/94‑1 (MQ=60)
AACTCCAGCCAACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAGCTGTTGGCCCT‑GCT < SRR4302545.6690515/94‑1 (MQ=60)
ACTCCAGCCCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTG > SRR4302545.7007294/1‑94 (MQ=60)
CTCCAGCCCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGC > SRR4302545.7563731/1‑94 (MQ=60)
CTCCAGCCCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGC < SRR4302545.3270280/94‑1 (MQ=60)
CTCCAGCCCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGC > SRR4302545.8048771/1‑94 (MQ=60)
AGCCCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGTCAAAGCAGGAATCTCCGCCATCAACTGTTGTCCCT‑GCCGCGCCA < SRR4302545.7546261/94‑1 (MQ=60)
GCCCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAG > SRR4302545.516093/1‑94 (MQ=60)
CCCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGA > SRR4302545.5251932/1‑94 (MQ=60)
CCCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGA < SRR4302545.8890185/94‑1 (MQ=60)
CCCACAACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTACGCCATCAACTGTTCGCCCT‑GCTGCGACAGA > SRR4302545.5251931/1‑94 (MQ=60)
CCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAG < SRR4302545.2877340/94‑1 (MQ=60)
CACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGC > SRR4302545.181415/1‑94 (MQ=60)
CCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTT > SRR4302545.6029787/1‑94 (MQ=60)
CCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTT < SRR4302545.8859400/94‑1 (MQ=60)
CACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTC > SRR4302545.6607062/1‑94 (MQ=60)
CCCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCC < SRR4302545.7194650/94‑1 (MQ=60)
CCCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCC < SRR4302545.3371398/94‑1 (MQ=60)
ACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCC > SRR4302545.6600371/1‑94 (MQ=60)
CCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCG > SRR4302545.2927418/1‑94 (MQ=60)
CCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGC > SRR4302545.10702937/1‑94 (MQ=60)
AGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTT < SRR4302545.1300142/94‑1 (MQ=60)
AGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTT > SRR4302545.10040362/1‑94 (MQ=60)
AGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTT < SRR4302545.9751138/94‑1 (MQ=60)
AGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTT > SRR4302545.1619395/1‑94 (MQ=60)
AGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTT > SRR4302545.1619394/1‑94 (MQ=60)
AGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTT < SRR4302545.1564565/94‑1 (MQ=60)
AGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCAT‑GCCGCGCCAGAGCTTCCGCTT < SRR4302545.7583325/94‑1 (MQ=60)
AGGCAAGCGCCATGAAAAGCCGCGATAACCTGAATGGGAAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTT < SRR4302545.6205944/94‑1 (MQ=60)
GCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCT > SRR4302545.3114496/1‑94 (MQ=60)
GCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCT > SRR4302545.2985052/1‑94 (MQ=60)
GCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCT > SRR4302545.902448/1‑94 (MQ=60)
GAAGCGCCAGGAATAGCAGCGATACCCTAAATGGGCAAAGCATGAATCCCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTT < SRR4302545.2724922/94‑1 (MQ=60)
CAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTT > SRR4302545.10051016/1‑94 (MQ=60)
AAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTG > SRR4302545.3424635/1‑94 (MQ=60)
AAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTG > SRR4302545.3866842/1‑94 (MQ=60)
AAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTG < SRR4302545.4726274/94‑1 (MQ=60)
AGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGC < SRR4302545.2498616/94‑1 (MQ=60)
AGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGC > SRR4302545.3066431/1‑94 (MQ=60)
GCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCG < SRR4302545.10303104/94‑1 (MQ=60)
CGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGC < SRR4302545.4935529/94‑1 (MQ=60)
CGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGC > SRR4302545.6061598/1‑94 (MQ=60)
CGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGC > SRR4302545.9224510/1‑94 (MQ=60)
GCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCC < SRR4302545.7743358/94‑1 (MQ=60)
caatcagTAGCCGCGATACCCGGAATGGGCAAAGCATGAATCTCCGCCATCATCTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCA < SRR4302545.5988644/87‑1 (MQ=60)
CCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCG > SRR4302545.7487985/1‑94 (MQ=60)
CCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCG < SRR4302545.627828/94‑1 (MQ=60)
CCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCG > SRR4302545.8163697/1‑94 (MQ=60)
CCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCG > SRR4302545.808165/1‑94 (MQ=60)
CATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGT > SRR4302545.7746686/1‑94 (MQ=60)
CATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGT > SRR4302545.4889609/1‑94 (MQ=60)
ATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTT < SRR4302545.10420647/94‑1 (MQ=60)
ATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTT > SRR4302545.8776366/1‑94 (MQ=60)
ATGAATAGCCGCGATAACCTGAATGGCCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTT < SRR4302545.934362/94‑1 (MQ=60)
TGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTT > SRR4302545.2054868/1‑94 (MQ=60)
TGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTAT < SRR4302545.6645150/94‑1 (MQ=60)
TGAATAGCCGCGATAACCGGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTT < SRR4302545.10361692/94‑1 (MQ=60)
AGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTT < SRR4302545.1802795/94‑1 (MQ=60)
GAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTTTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTT < SRR4302545.8713589/94‑1 (MQ=60)
GAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTT < SRR4302545.9085215/94‑1 (MQ=60)
GAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTT > SRR4302545.4009199/1‑94 (MQ=60)
GAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTT > SRR4302545.2635145/1‑94 (MQ=60)
GAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTT < SRR4302545.3353114/94‑1 (MQ=60)
ATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGC < SRR4302545.7692942/94‑1 (MQ=60)
ATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGC < SRR4302545.2696006/94‑1 (MQ=60)
TAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCA > SRR4302545.3785696/1‑94 (MQ=60)
TAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCA > SRR4302545.4792447/1‑94 (MQ=60)
TAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCA < SRR4302545.33704/94‑1 (MQ=60)
AGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAG < SRR4302545.105735/94‑1 (MQ=60)
CCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTT < SRR4302545.6155593/94‑1 (MQ=60)
CCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTT < SRR4302545.303618/94‑1 (MQ=60)
CCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GATGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTT > SRR4302545.7402360/1‑94 (MQ=60)
CGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCC > SRR4302545.454242/1‑94 (MQ=60)
ATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGA < SRR4302545.7894425/94‑1 (MQ=60)
TAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGAT > SRR4302545.1358833/1‑94 (MQ=60)
TAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGtctat > SRR4302545.2782202/1‑89 (MQ=60)
ACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCA < SRR4302545.471886/94‑1 (MQ=60)
ACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCA < SRR4302545.7834358/94‑1 (MQ=60)
ACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCA > SRR4302545.7606143/1‑94 (MQ=60)
CCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCAT < SRR4302545.7187220/94‑1 (MQ=60)
CCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCAT > SRR4302545.5403041/1‑94 (MQ=60)
CCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCAT > SRR4302545.9988392/1‑94 (MQ=60)
CCTGAATGGGCAAAGCATGAAGCTCCGGCATCAACTTTTGGCTCT‑GCTGTGCCAGTGCTTCAGTTTCTTGCGCTGTTTTGCGGTGGCCGATGAT > SRR4302545.9951856/1‑94 (MQ=18)
CTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATG < SRR4302545.1301494/94‑1 (MQ=60)
CTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATG > SRR4302545.2534164/1‑94 (MQ=60)
TGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGT > SRR4302545.4250851/1‑94 (MQ=60)
TGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGT < SRR4302545.2560361/94‑1 (MQ=60)
TGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGT < SRR4302545.863183/94‑1 (MQ=60)
GAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTT > SRR4302545.311998/1‑94 (MQ=60)
GAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTT > SRR4302545.1025488/1‑94 (MQ=60)
GAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTT < SRR4302545.3213866/94‑1 (MQ=60)
AATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTG > SRR4302545.4662750/1‑94 (MQ=60)
AATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTG > SRR4302545.4662749/1‑94 (MQ=60)
ATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGA > SRR4302545.3747785/1‑94 (MQ=60)
ATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGA > SRR4302545.9818870/1‑94 (MQ=60)
ATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGA > SRR4302545.420140/1‑94 (MQ=60)
TGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGAT < SRR4302545.5974474/94‑1 (MQ=60)
TGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGAT < SRR4302545.2798535/94‑1 (MQ=60)
AGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGAT < SRR4302545.6603635/94‑1 (MQ=60)
AGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGAT < SRR4302545.1310450/94‑1 (MQ=60)
GGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATG < SRR4302545.10075211/94‑1 (MQ=60)
GGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATG < SRR4302545.5089154/94‑1 (MQ=60)
GGGCAAAGCACGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATG < SRR4302545.4360734/94‑1 (MQ=60)
CAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑G‑CGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTG < SRR4302545.9210410/94‑1 (MQ=60)
AAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTG < SRR4302545.7530142/94‑1 (MQ=60)
AAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGC < SRR4302545.8149712/94‑1 (MQ=60)
AAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGC > SRR4302545.3045787/1‑94 (MQ=60)
AGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCG < SRR4302545.10053953/94‑1 (MQ=60)
GCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGC > SRR4302545.910291/1‑94 (MQ=60)
CATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCC > SRR4302545.22303/1‑94 (MQ=60)
ATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCA > SRR4302545.555499/1‑94 (MQ=60)
ATGAATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCA > SRR4302545.2208351/1‑94 (MQ=60)
ATGAATCTCCGCCATAAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCA > SRR4302545.5560529/1‑94 (MQ=60)
AATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCA > SRR4302545.712682/1‑94 (MQ=60)
AATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCA < SRR4302545.7988900/94‑1 (MQ=60)
ATCTCCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAA < SRR4302545.4418142/94‑1 (MQ=60)
ATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAA < SRR4302545.7726250/94‑1 (MQ=60)
CTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATG < SRR4302545.2268762/94‑1 (MQ=60)
CCGCCATCACCTG‑TGGCCCTGGCGGCGCCAGAGCTTCCGTTTCTTGCCCGTTTTTGCAGTTGCCGATCTTGTTGATGTCTGCGCCAGCAATGAA < SRR4302545.4333788/94‑1 (MQ=44)
CCGCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAA < SRR4302545.5710624/94‑1 (MQ=60)
CCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAA < SRR4302545.5114257/94‑1 (MQ=60)
CGCCATCAACTGTTGTCCCT‑GCTGCTCCAGAGCTTCCGCTTCTTGCGCTGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAG < SRR4302545.9711996/94‑1 (MQ=60)
GCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGT < SRR4302545.1617648/94‑1 (MQ=60)
GCCATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGT > SRR4302545.374445/1‑94 (MQ=60)
CTATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTT < SRR4302545.3646023/94‑1 (MQ=60)
ATCAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGT > SRR4302545.3018855/1‑94 (MQ=60)
CAACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCC > SRR4302545.4220012/1‑94 (MQ=60)
CAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCC < SRR4302545.2422016/94‑1 (MQ=60)
CAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCC > SRR4302545.9725543/1‑94 (MQ=60)
ACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGG > SRR4302545.9363926/1‑94 (MQ=60)
ACTGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGG < SRR4302545.4333193/94‑1 (MQ=60)
TGTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTT > SRR4302545.2631392/1‑94 (MQ=60)
TGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTT > SRR4302545.6573703/1‑94 (MQ=60)
GTTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTT > SRR4302545.513881/1‑94 (MQ=60)
TTGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGatcggcaac < SRR4302545.4507852/94‑10 (MQ=60)
TGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAG > SRR4302545.2501752/1‑94 (MQ=60)
TGGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAG < SRR4302545.1502889/94‑1 (MQ=60)
TGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAG > SRR4302545.566721/1‑94 (MQ=60)
TGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAG < SRR4302545.2108647/94‑1 (MQ=60)
GGCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGC < SRR4302545.3407675/94‑1 (MQ=60)
GCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGCG < SRR4302545.6239127/94‑1 (MQ=60)
GCCCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGCG < SRR4302545.6065620/94‑1 (MQ=60)
CCT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGCGGA > SRR4302545.3173898/1‑94 (MQ=60)
CCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGCGGA < SRR4302545.4030153/94‑1 (MQ=60)
CCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGCGGA > SRR4302545.10244137/1‑94 (MQ=60)
CCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGCGGA > SRR4302545.3966020/1‑94 (MQ=60)
CT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGCGGAG < SRR4302545.9392583/94‑1 (MQ=60)
CT‑GCTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGCGGAG < SRR4302545.9392584/94‑1 (MQ=60)
CTGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGCGGAGACA > SRR4302545.513273/1‑94 (MQ=60)
CGCGCCAGAGCTTCCGCTTCTTGGGCGGTTTTGAAGTTGCCAATCATGTTGATGTaggcgacagaaatgaagttgaacgggatagagtggacaa > SRR4302545.2982278/1‑55 (MQ=40)
CGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGATTAGCGGAGACAC > SRR4302545.5084009/1‑94 (MQ=60)
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AACTCCAGCCCACCACCCAGGCAAGCGCCATGAATAGCCGCGATAACCTGAATGGGCAAAGCATGAATCTCCGCCATCAACTGTTGGCCCT‑GCCGCGCCAGAGCTTCCGCTTCTTGCGCCGTTTTGCAGTTGCCGATCATGTTGATGTCTGCGCCAGCAATGAAGTTGTCCGGTTTAGCGGAGACAA > NC_000913/2456824‑2457010
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
