Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
176,432 |
A→G |
K442K (AAA→AAG) |
yadQ → |
putative channel transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 176,432 | 0 | A | G | 100.0%
| 500.5
/ NA
| 158 | K442K (AAA→AAG) | yadQ | putative channel transporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (68/90); total (68/90) |
Only 100 of 203 total aligned reads displayed.
CTGGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAACCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGAA > NC_000913/176343‑176521
|
ctggAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGGAGCCg > 2:3287986/1‑93 (MQ=255)
ctggAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCg > 2:4919664/1‑93 (MQ=255)
tggAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGc < 1:1166667/93‑1 (MQ=255)
tggAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGc > 1:5774054/1‑93 (MQ=255)
tggAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGc > 2:2478292/1‑93 (MQ=255)
ggAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCt > 1:1321001/1‑93 (MQ=255)
gagaTGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCta > 1:4441988/1‑93 (MQ=255)
gagaTGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCta > 1:5219444/1‑93 (MQ=255)
ggaTGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCtat < 2:4752130/92‑1 (MQ=255)
agaTGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCtat < 1:4392424/93‑1 (MQ=255)
gaTGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCtata < 1:6044857/93‑1 (MQ=255)
gaTGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCtata > 2:1810014/1‑93 (MQ=255)
tGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACt > 1:583435/1‑93 (MQ=255)
gACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTc < 1:4639278/93‑1 (MQ=255)
aCCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCg > 1:5515077/1‑93 (MQ=255)
ccGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCgg > 2:4402163/1‑93 (MQ=255)
cGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGc > 2:4078478/1‑93 (MQ=255)
gATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCg > 2:4168128/1‑93 (MQ=255)
gATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCg > 1:2454379/1‑93 (MQ=255)
aTAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGACGCAGCTATACTCTGCGa > 2:399648/1‑93 (MQ=255)
aaCTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGAtt < 2:4546511/93‑1 (MQ=255)
aCTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTc > 2:2600665/1‑93 (MQ=255)
cTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTTGGCGATTCt > 1:5651282/1‑93 (MQ=255)
cTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCt < 2:1622929/93‑1 (MQ=255)
tACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGAAATTTACCGGCGGGGAGGCGCTATACTCGGCGATtttt > 1:4898999/1‑93 (MQ=255)
catcTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCTCTATACTCGGCGATTCTTgcg < 2:4715082/90‑1 (MQ=255)
cAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTgcg < 1:1734007/93‑1 (MQ=255)
gCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTgcgcg > 1:3914171/1‑93 (MQ=255)
tCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCa > 2:1547902/1‑93 (MQ=255)
tCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCCGCGATTCTTgcgcgcc > 2:3002606/1‑92 (MQ=255)
cATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGGAGCCGCTATACTCGGCGATTCTTGCGCGCAc > 2:1187423/1‑93 (MQ=255)
ttttGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGc < 1:785556/93‑1 (MQ=255)
ttttGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGc > 2:6251115/1‑93 (MQ=255)
ttttGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGc < 1:3763553/93‑1 (MQ=255)
ttGCGAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTg < 2:6437506/93‑1 (MQ=255)
ttGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTg < 2:2658307/93‑1 (MQ=255)
gCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGc > 1:3587524/1‑93 (MQ=255)
gCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCCGGc > 1:4225949/1‑93 (MQ=255)
cAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGcca > 1:262388/1‑91 (MQ=255)
cAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCaa < 2:3477181/93‑1 (MQ=255)
gATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACa > 1:6063935/1‑93 (MQ=255)
gATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACa > 1:3826712/1‑93 (MQ=255)
gATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACa > 2:2589909/1‑93 (MQ=255)
ttattgCCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAgg < 2:2383213/93‑1 (MQ=255)
ttattaCCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCCATACTCGGCGCTTCTTGCGCGCACGCTGGCAAAACAgg > 1:817974/1‑93 (MQ=255)
tattaCCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGa < 1:4113271/93‑1 (MQ=255)
attaCCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGaa < 2:2832361/93‑1 (MQ=255)
attaCCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGaa < 1:5172550/93‑1 (MQ=255)
attaCCGGTCTTGGCGAAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGaa < 2:42729/93‑1 (MQ=255)
ttaCCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAg > 1:5625383/1‑93 (MQ=255)
aCCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCt > 2:3887676/1‑93 (MQ=255)
ccGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTg > 2:486122/1‑93 (MQ=255)
ggTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAg > 2:3020495/1‑93 (MQ=255)
tCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCa > 1:2278772/1‑93 (MQ=255)
tCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACCCTCGCAAAAAAAGAAACTGAGCa > 1:3417084/1‑93 (MQ=255)
cTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCaa < 2:2100359/93‑1 (MQ=255)
cTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATAATCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCaa > 1:989520/1‑93 (MQ=255)
ttGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTTGGCGATTCTTACCCGCACGCTGGCGAAACAGGAAGCTGAGCCAc > 2:6153159/1‑93 (MQ=255)
ttGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCCAc > 2:6273923/1‑93 (MQ=255)
ttGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAAc < 2:572288/93‑1 (MQ=255)
tGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACt < 1:3287754/93‑1 (MQ=255)
gcAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGGAACTgggg > 2:5518324/1‑91 (MQ=255)
cAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTTCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGgcgc > 2:2932298/1‑93 (MQ=255)
cAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACCCTGGCAAAACAGGAAGCTGAGCAACTGgcgc > 1:1544299/1‑93 (MQ=255)
cacTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGaa < 2:6102226/93‑1 (MQ=255)
acTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCTGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAg > 1:4850239/1‑93 (MQ=255)
cTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGc > 2:2062783/1‑93 (MQ=255)
cTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGc < 2:1365806/93‑1 (MQ=255)
tATTAGCGCAATTTACCGGCGGGAAGCCGCTATAATCCGCGGTTTTTGCGCGCACGCTGGCAAAACAGGGAGCTGAGCAACTGGGGCGAAGCa > 2:5859866/1‑93 (MQ=255)
aTTAGCGCAATTTACCGGCGGGAAGGCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCCACTGGCGCGAAGCaa > 2:2681207/1‑93 (MQ=255)
aTTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCaa < 2:1925267/93‑1 (MQ=255)
ttAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAg < 2:1960662/93‑1 (MQ=255)
aGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGc < 2:4630961/93‑1 (MQ=255)
aGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGc < 1:3170684/93‑1 (MQ=255)
gcAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGc > 2:4486786/1‑93 (MQ=255)
gcAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGACGc > 2:5345851/1‑93 (MQ=255)
cAATTTCCCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCa < 2:2248018/93‑1 (MQ=255)
cAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCa < 1:1040550/93‑1 (MQ=255)
cAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCa < 1:283770/93‑1 (MQ=255)
cAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCa < 1:3436062/93‑1 (MQ=255)
aTTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATc < 1:724791/93‑1 (MQ=255)
aTTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATc < 2:2445551/93‑1 (MQ=255)
tttACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATca > 2:746896/1‑93 (MQ=255)
tttACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATca < 1:2733953/93‑1 (MQ=255)
ttACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATcag > 2:105444/1‑93 (MQ=255)
ttACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATcag < 1:1340085/93‑1 (MQ=255)
tACCGGCGGGGAAACGCCATACTCCGCGACTCTTGCGCGCACGCTGGCCAAACACGGAGCTGGGACACCGGCGCGCAGGAAGGCCCCGTcacg > 2:139723/1‑91 (MQ=255)
tACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATcagc > 2:4804644/1‑93 (MQ=255)
aCCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATcagcc < 2:5268162/93‑1 (MQ=255)
aCCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATcagcc < 2:5401749/93‑1 (MQ=255)
ccGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGGCGCATcagcca > 2:5196374/1‑93 (MQ=255)
ccGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATcagcca < 2:3809994/93‑1 (MQ=255)
ccGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATcagcca < 2:3416973/93‑1 (MQ=255)
ccGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATcagcca < 1:1913086/93‑1 (MQ=255)
cggcggGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATcagccag > 1:510898/1‑93 (MQ=255)
gcggGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCg > 1:531029/1‑93 (MQ=255)
cggGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCga < 1:3377286/93‑1 (MQ=255)
cggGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAACCAAGGCCGCATCAGCCAGCga < 1:6421626/93‑1 (MQ=255)
gggAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCgag < 1:1954129/93‑1 (MQ=255)
ggAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGTAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCgaga > 1:387894/1‑93 (MQ=255)
|
CTGGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAACCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGAA > NC_000913/176343‑176521
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTTCTGGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAACCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGAATACT > NC_000913/176339‑176525
|
GGTTCTGGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAG > SRR4302537.5986257/1‑94 (MQ=60)
TTCTGGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTCGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCC < SRR4302537.5399504/94‑1 (MQ=60)
CTGGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGC > SRR4302537.5813630/1‑94 (MQ=60)
TGGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCT < SRR4302537.1174778/94‑1 (MQ=60)
TGGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCT > SRR4302537.1330210/1‑94 (MQ=60)
GGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTA > SRR4302537.4472666/1‑94 (MQ=60)
GGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTA > SRR4302537.5255341/1‑94 (MQ=60)
GGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTA > SRR4302537.2423268/1‑94 (MQ=60)
AGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATA < SRR4302537.4422732/94‑1 (MQ=60)
GATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATAC < SRR4302537.6086373/94‑1 (MQ=60)
ATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACT > SRR4302537.4430812/1‑94 (MQ=60)
ATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACT < SRR4302537.5775823/94‑1 (MQ=60)
ATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACT > SRR4302537.587423/1‑94 (MQ=60)
GACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCG < SRR4302537.4671362/94‑1 (MQ=60)
GACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCG > SRR4302537.5552735/1‑94 (MQ=60)
CCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGC > SRR4302537.3177965/1‑94 (MQ=60)
CGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCG > SRR4302537.2471642/1‑94 (MQ=60)
CGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATAATCGGCG > SRR4302537.5558506/1‑94 (MQ=60)
AACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTT > SRR4302537.346449/1‑94 (MQ=60)
ACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTTGGCGATTCT > SRR4302537.5689956/1‑94 (MQ=60)
CTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTT < SRR4302537.1079136/94‑1 (MQ=60)
CTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGAAATTTACCGGCGGGGAGGCGCTATACTCGGCGATTTTT > SRR4302537.4932816/1‑94 (MQ=60)
CAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGC < SRR4302537.1746101/94‑1 (MQ=60)
AGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCG > SRR4302537.3941533/1‑94 (MQ=60)
GCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCCGCGATTCTTGCGCGC > SRR4302537.77533/1‑94 (MQ=60)
CTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCA < SRR4302537.3447182/94‑1 (MQ=60)
TCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCAC > SRR4302537.4886663/1‑94 (MQ=60)
CATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACG > SRR4302537.4630827/1‑94 (MQ=60)
ATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTTCGCGCACGC > SRR4302537.3391336/1‑94 (MQ=60)
TTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCT < SRR4302537.790948/94‑1 (MQ=60)
TTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCT < SRR4302537.3789982/94‑1 (MQ=60)
TTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGG < SRR4302537.5449682/94‑1 (MQ=60)
TGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGC < SRR4302537.1344986/94‑1 (MQ=60)
TGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGC > SRR4302537.3612816/1‑94 (MQ=60)
TGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCCGGC > SRR4302537.4255382/1‑94 (MQ=60)
CCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCCA > SRR4302537.264240/1‑94 (MQ=60)
CAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAA > SRR4302537.1587884/1‑94 (MQ=60)
AATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAA < SRR4302537.5359451/94‑1 (MQ=60)
TGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACA > SRR4302537.3853542/1‑94 (MQ=60)
TGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACA > SRR4302537.6105599/1‑94 (MQ=60)
ATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGG > SRR4302537.204842/1‑94 (MQ=60)
ATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCCATACTCGGCGCTTCTTGCGCGCACGCTGGCAAAACAGG > SRR4302537.823593/1‑94 (MQ=60)
TATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAA < SRR4302537.51625/94‑1 (MQ=60)
TATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAA < SRR4302537.4142009/94‑1 (MQ=60)
TATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCCATACTCGGCGATTCTTGCGCGCCCGCTGGCAAAACAGGAA > SRR4302537.805355/1‑94 (MQ=60)
ATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAG > SRR4302537.5663850/1‑94 (MQ=60)
ATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAG < SRR4302537.5208157/94‑1 (MQ=60)
ATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAG > SRR4302537.1507254/1‑94 (MQ=60)
TACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCT < SRR4302537.5978331/94‑1 (MQ=60)
CCGGTTGTGGCGCAACCCTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGA < SRR4302537.1942244/94‑1 (MQ=60)
GGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGGGCGCACGCTGGCAAAACAGGAAGCTGCGC > SRR4302537.2772097/1‑94 (MQ=60)
GGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGC > SRR4302537.476544/1‑94 (MQ=60)
GTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCA > SRR4302537.2294858/1‑94 (MQ=60)
GTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAAAAGGAAGCTGAGCA > SRR4302537.3910999/1‑94 (MQ=60)
GTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACCCTCGCAAAAAAAGAAACTGAGCA > SRR4302537.3441275/1‑94 (MQ=60)
TCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATAATCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAA > SRR4302537.996359/1‑94 (MQ=60)
CTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAAC < SRR4302537.726319/94‑1 (MQ=60)
TTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACT > SRR4302537.6186099/1‑94 (MQ=60)
TGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTG < SRR4302537.3310991/94‑1 (MQ=60)
GCGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGC < SRR4302537.8768/94‑1 (MQ=60)
CGCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCG < SRR4302537.1201041/94‑1 (MQ=60)
GCAACACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACCCTGGCAAAACAGGAAGCTGAGCAACTGGCGC > SRR4302537.1555081/1‑94 (MQ=60)
AACACTATTAGGGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGGACGCTGGCAAAACCAGAAGCCGAGCAACTGGTGCGA > SRR4302537.594472/1‑94 (MQ=60)
AACACTATTAGCGCAATTTACCGGCGGGAAGGCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGGTGAGCCACTGGCGCGA > SRR4302537.364774/1‑94 (MQ=60)
CACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCTGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAG > SRR4302537.4883707/1‑94 (MQ=60)
CACTATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAG < SRR4302537.424451/94‑1 (MQ=60)
TATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAA < SRR4302537.3817947/94‑1 (MQ=60)
ATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAG > SRR4302537.4122729/1‑94 (MQ=60)
ATTAGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAG < SRR4302537.5266640/94‑1 (MQ=60)
TAGCGCAATTTACCGGCGGGGAGGCGCTATACTCGGCGATTCTTGCGCGCACGCCGGCCAAACAGGAAGATGAGCGACTGGCGCGAAGCAAGGC > SRR4302537.5644156/1‑94 (MQ=60)
AGCGCAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCC < SRR4302537.3192960/94‑1 (MQ=60)
CAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCAT < SRR4302537.1047737/94‑1 (MQ=60)
CAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCAT < SRR4302537.285746/94‑1 (MQ=60)
CAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCAT < SRR4302537.3229299/94‑1 (MQ=60)
CAATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCAT < SRR4302537.3460381/94‑1 (MQ=60)
AATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATC < SRR4302537.2632839/94‑1 (MQ=60)
ATTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCA < SRR4302537.729738/94‑1 (MQ=60)
TTTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAG < SRR4302537.2753034/94‑1 (MQ=60)
TTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGC < SRR4302537.3865734/94‑1 (MQ=60)
TTACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGC < SRR4302537.1349418/94‑1 (MQ=60)
TACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCC > SRR4302537.3419520/1‑94 (MQ=60)
ACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCA < SRR4302537.4386537/94‑1 (MQ=60)
ACCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCA < SRR4302537.4977857/94‑1 (MQ=60)
CCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAG < SRR4302537.1926366/94‑1 (MQ=60)
CCGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAG > SRR4302537.514401/1‑94 (MQ=60)
CGGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGC > SRR4302537.5664328/1‑94 (MQ=60)
GGCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCG > SRR4302537.534669/1‑94 (MQ=60)
GCGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGA > SRR4302537.2730671/1‑94 (MQ=60)
CGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAG < SRR4302537.3401224/94‑1 (MQ=60)
CGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAG < SRR4302537.5840916/94‑1 (MQ=60)
CGGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAACCAAGGCCGCATCAGCCAGCGAG < SRR4302537.6465275/94‑1 (MQ=60)
CGGGAAGCCGCTATACTAGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAG < SRR4302537.1822634/94‑1 (MQ=60)
GGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGTAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGA > SRR4302537.390575/1‑94 (MQ=60)
GGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGA < SRR4302537.5212883/94‑1 (MQ=60)
GGGAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGA < SRR4302537.1967722/94‑1 (MQ=60)
GAAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGAAT < SRR4302537.6092509/94‑1 (MQ=60)
AAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGAATA < SRR4302537.5285863/94‑1 (MQ=60)
AAGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGAATA > SRR4302537.1683411/1‑94 (MQ=60)
AGCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGAATAC < SRR4302537.314459/94‑1 (MQ=60)
GCCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGAATACT < SRR4302537.2608032/94‑1 (MQ=60)
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GGTTCTGGAGATGACCGATAACTACCAGCTCATTTTGCCAATGATTATTACCGGTCTTGGCGCAACACTATTAGCGCAATTTACCGGCGGGAAACCGCTATACTCGGCGATTCTTGCGCGCACGCTGGCAAAACAGGAAGCTGAGCAACTGGCGCGAAGCAAGGCCGCATCAGCCAGCGAGAATACT > NC_000913/176339‑176525
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
