Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,980,940 |
+C |
coding (1/363 nt)
coding (627/627 nt) |
araH ←
araH ← |
ABC‑type arabinose transport system permease component
ABC‑type arabinose transport system permease component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,980,939 | 1 | . | C | 99.0%
| 653.8
/ ‑5.9
| 195 | A210G (GCC→GGC) | araH | ABC‑type arabinose transport system permease component |
| Reads supporting (aligned to +/- strand): ref base . (1/0); major base C (108/84); minor base A (2/0); total (111/84) |
| Fisher's exact test for biased strand distribution p-value = 5.06e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 220 total aligned reads displayed.
CCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑CTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGT > NC_000913/1980847‑1981026
|
ccAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑Cgg < 2:6217066/93‑1 (MQ=255)
cAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑c > 1:1091784/1‑93 (MQ=255)
aGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑cc > 1:5960508/1‑92 (MQ=255)
aGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑cc < 1:2907715/93‑2 (MQ=255)
gAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑cct > 2:5093698/1‑91 (MQ=255)
gAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑cct > 2:1948169/1‑91 (MQ=255)
gAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑cct > 2:641366/1‑91 (MQ=255)
aataatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑cctc < 1:1773930/93‑4 (MQ=255)
ataatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑cctct > 2:4621317/1‑89 (MQ=255)
ataatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑cctct < 2:5684789/93‑5 (MQ=255)
ataatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑cctct > 2:476775/1‑89 (MQ=255)
aatTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTc > 2:430312/1‑93 (MQ=255)
cGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTcc > 2:4384616/1‑93 (MQ=255)
cGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTcc < 2:2762819/93‑1 (MQ=255)
tATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGcc > 1:3723494/1‑93 (MQ=255)
tCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCaa > 2:6267191/1‑93 (MQ=255)
tCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGGGCGAACAACCGGTACACCCGCCAGACGCGCCGC‑CTCTTCGTTCCCGCCaa > 2:100545/1‑93 (MQ=255)
cGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAAt > 1:142136/1‑93 (MQ=255)
aTACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCa < 1:1897340/93‑1 (MQ=255)
aTACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCa > 2:1461338/1‑93 (MQ=255)
aTACCAGGCCGGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCa < 2:5237658/93‑1 (MQ=255)
tACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAg < 2:4422461/93‑1 (MQ=255)
tACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAg < 2:3607848/93‑1 (MQ=255)
tACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAg < 1:1988064/93‑1 (MQ=255)
aCCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAgg > 2:1426449/1‑93 (MQ=255)
aCCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAgg < 1:2085196/93‑1 (MQ=255)
ccAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAggg < 1:4351791/93‑1 (MQ=255)
cAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGgt > 2:3416088/1‑93 (MQ=255)
ggCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGgtgt > 1:5089553/1‑93 (MQ=255)
ggCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGgtgt > 1:4176083/1‑93 (MQ=255)
ggCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGgtgt > 1:4055116/1‑93 (MQ=255)
gCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt > 2:3682843/1‑93 (MQ=255)
ccTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTa < 1:4650048/93‑1 (MQ=255)
ccTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTa > 1:1197449/1‑93 (MQ=255)
cTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTAc < 2:1596183/93‑1 (MQ=255)
cTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTAc > 1:4566719/1‑93 (MQ=255)
cTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCACGCCAATCGCCAGCGTGTTAc > 2:5733398/1‑93 (MQ=255)
tGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACg > 2:2901733/1‑93 (MQ=255)
tGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACg > 2:1512652/1‑93 (MQ=255)
agaACGAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCa > 2:4090710/1‑93 (MQ=255)
aaaaCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCa < 1:5179698/91‑1 (MQ=255)
gaACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaa > 1:3228254/1‑93 (MQ=255)
aaCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaaa < 2:2175912/93‑1 (MQ=255)
aaCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaaa < 2:5111658/93‑1 (MQ=255)
aCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAg > 2:3071034/1‑93 (MQ=255)
aCAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAg < 2:26037/93‑1 (MQ=255)
cAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg > 1:5832801/1‑93 (MQ=255)
aaaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt < 2:5468950/93‑1 (MQ=255)
aaaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt > 1:6260736/1‑93 (MQ=255)
aaaGATAATAATTTGGGTGCGAACACCCGGTCCGCCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt < 1:38968/93‑1 (MQ=255)
aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg < 2:4635659/93‑1 (MQ=255)
aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg < 2:5710514/93‑1 (MQ=255)
aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg < 2:1810024/93‑1 (MQ=255)
aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg > 1:6017469/1‑93 (MQ=255)
aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg < 1:1957005/93‑1 (MQ=255)
aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg > 1:1578496/1‑93 (MQ=255)
aaGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGACTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtg > 2:6380815/1‑93 (MQ=255)
aGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtgg > 1:711127/1‑93 (MQ=255)
aGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtgg < 1:5251952/93‑1 (MQ=255)
gATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCACGGCGTTACGACCAACggtggt > 2:5036042/1‑93 (MQ=255)
ataataATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtt > 1:5727350/1‑93 (MQ=255)
ataataATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtt > 1:392614/1‑93 (MQ=255)
ataaaaATTTTGGTGCTAACAACCGGTACACCCGCCAGACACG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGATGTTACGACCAAAGGTGGtt < 2:6005742/93‑1 (MQ=255)
taataaTTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGttt > 1:3344541/1‑93 (MQ=255)
aataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtttt > 1:3876122/1‑93 (MQ=255)
aataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtttt > 1:5612554/1‑93 (MQ=255)
aataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtttt < 2:1081692/93‑1 (MQ=255)
aataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGtttt < 1:2548334/93‑1 (MQ=255)
ataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTa < 1:1691990/93‑1 (MQ=255)
ataatTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTa > 1:4855275/1‑93 (MQ=255)
atTTTGGTGCGAACAACCGGTACCCCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTc < 2:1600116/93‑1 (MQ=255)
atTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTc > 2:5896816/1‑93 (MQ=255)
ttttGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTca > 2:5541175/1‑93 (MQ=255)
ttttGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTca < 1:6143944/93‑1 (MQ=255)
ttttGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTca > 2:2928332/1‑93 (MQ=255)
tttGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcag < 2:345705/93‑1 (MQ=255)
tGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca > 2:418392/1‑93 (MQ=255)
tGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca < 2:6123489/93‑1 (MQ=255)
tGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTcagca > 1:838179/1‑93 (MQ=255)
gTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCagcagc > 1:1778189/1‑93 (MQ=255)
gTGCGAACAACCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCagcagc > 2:5512908/1‑93 (MQ=255)
cGAACACCCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCaaa < 2:1140542/93‑1 (MQ=255)
aacaacCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAcc > 2:6165040/1‑93 (MQ=255)
caacCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCaa > 1:2819801/1‑93 (MQ=255)
acCGGTACCCCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAg < 2:2107400/93‑1 (MQ=255)
acCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCACAGGTGGTTTTATTCAGCAGCAAATCAAAg > 2:3853653/1‑93 (MQ=255)
acCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAg > 2:2434819/1‑93 (MQ=255)
acCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAg < 2:3799166/93‑1 (MQ=255)
acCGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAg > 1:6106583/1‑93 (MQ=255)
cGGTACACCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGAt > 2:4896370/1‑93 (MQ=255)
tccacCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAAt < 2:6002165/91‑1 (MQ=255)
acacCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATc < 2:3443335/93‑1 (MQ=255)
cacCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCa < 1:3499198/93‑1 (MQ=255)
cacCCGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCa > 2:732276/1‑93 (MQ=255)
ccGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGac < 1:3272588/93‑1 (MQ=255)
ccGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGac < 2:4687556/93‑1 (MQ=255)
ccGCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGac > 2:3822395/1‑93 (MQ=255)
gCCAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGacac < 2:3358060/93‑1 (MQ=255)
cAGACGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACAcgc > 2:398281/1‑93 (MQ=255)
aCGCG‑CGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGAc < 1:133140/93‑1 (MQ=255)
|
CCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCG‑CGG‑CTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGT > NC_000913/1980847‑1981026
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAG > NC_000913/1980847‑1981033
|
CCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑C > SRR4302537.1099324/1‑94 (MQ=60)
CAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑C‑C > SRR4302537.95574/1‑94 (MQ=60)
CAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑C‑C > SRR4302537.6001419/1‑94 (MQ=60)
AGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑Cct < SRR4302537.2928141/94‑3 (MQ=60)
AATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCT < SRR4302537.1786283/94‑1 (MQ=60)
ATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGT > SRR4302537.1990522/1‑94 (MQ=60)
GCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGC > SRR4302537.6391533/1‑94 (MQ=60)
CTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCC > SRR4302537.3749658/1‑94 (MQ=60)
TCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAAT > SRR4302537.143145/1‑94 (MQ=60)
TCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAAT < SRR4302537.1635880/94‑1 (MQ=60)
CGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATC < SRR4302537.1493417/94‑1 (MQ=60)
CGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATC > SRR4302537.167963/1‑94 (MQ=60)
CGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATC < SRR4302537.6009781/94‑1 (MQ=60)
GCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCG < SRR4302537.5920992/94‑1 (MQ=60)
GCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCG > SRR4302537.1790571/1‑94 (MQ=60)
GCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCG < SRR4302537.5241529/94‑1 (MQ=60)
CTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGC > SRR4302537.2436352/1‑94 (MQ=60)
GAGACCAGGCCTGAGATAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCA < SRR4302537.6175575/94‑1 (MQ=60)
ATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAG < SRR4302537.1910523/94‑1 (MQ=60)
TACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGG < SRR4302537.2001887/94‑1 (MQ=60)
ACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGG > SRR4302537.4024107/1‑94 (MQ=60)
ACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGG < SRR4302537.2099894/94‑1 (MQ=60)
CCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGT < SRR4302537.4381933/94‑1 (MQ=60)
CATGCCTAAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTCCCCCCGCCAGACGCCCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTG < SRR4302537.1271293/94‑1 (MQ=60)
CAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTG > SRR4302537.2994778/1‑94 (MQ=60)
CAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCCCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTG > SRR4302537.5743377/1‑94 (MQ=60)
AGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGT < SRR4302537.6296819/94‑1 (MQ=60)
AGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGT > SRR4302537.4205238/1‑94 (MQ=60)
AGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGT > SRR4302537.4083459/1‑94 (MQ=60)
AGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGT > SRR4302537.1948523/1‑94 (MQ=60)
AGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGT > SRR4302537.5124593/1‑94 (MQ=60)
GGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTT > SRR4302537.1276593/1‑94 (MQ=60)
GCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTA > SRR4302537.1205769/1‑94 (MQ=60)
CCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTAC > SRR4302537.4598328/1‑94 (MQ=60)
CCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTAC > SRR4302537.4616061/1‑94 (MQ=60)
CCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTAC < SRR4302537.4682198/94‑1 (MQ=60)
CTGAGAGGACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACG > SRR4302537.177327/1‑94 (MQ=60)
TGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGA > SRR4302537.2014984/1‑94 (MQ=60)
AGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAA > SRR4302537.3251003/1‑94 (MQ=60)
AAAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAA < SRR4302537.5215343/94‑1 (MQ=60)
ACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGG < SRR4302537.4547003/94‑1 (MQ=60)
ACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGG > SRR4302537.5872778/1‑94 (MQ=60)
ACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGG < SRR4302537.4230571/94‑1 (MQ=60)
CAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCANAGGT > SRR4302537.1123744/1‑94 (MQ=60)
CAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGT > SRR4302537.6303720/1‑94 (MQ=60)
CAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGT > SRR4302537.5814758/1‑94 (MQ=60)
AAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTG > SRR4302537.1589527/1‑94 (MQ=60)
AAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTG > SRR4302537.6058809/1‑94 (MQ=60)
AAAGATAATAATTTGGGTGCGAACACCCGGTCCGCCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTG < SRR4302537.39264/94‑1 (MQ=60)
AAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGG > SRR4302537.715995/1‑94 (MQ=60)
AAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGG > SRR4302537.3919515/1‑94 (MQ=60)
AAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGG < SRR4302537.1970620/94‑1 (MQ=60)
AGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGT < SRR4302537.5288092/94‑1 (MQ=60)
GATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTT > SRR4302537.5766552/1‑94 (MQ=60)
GATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTT > SRR4302537.395336/1‑94 (MQ=60)
ATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTT < SRR4302537.5202056/94‑1 (MQ=60)
ATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTT > SRR4302537.3368219/1‑94 (MQ=60)
TAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTT > SRR4302537.3903234/1‑94 (MQ=60)
TAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTT > SRR4302537.5650931/1‑94 (MQ=60)
TAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTT > SRR4302537.5182342/1‑94 (MQ=60)
AATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTA < SRR4302537.2566186/94‑1 (MQ=60)
AATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTA > SRR4302537.4888777/1‑94 (MQ=60)
ATAATTTTGGTGCGAACACCCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTAT < SRR4302537.1198219/94‑1 (MQ=60)
ATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTAT < SRR4302537.1703833/94‑1 (MQ=60)
TAATTTTGGTGCGAACAACCGGTACCCCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATT < SRR4302537.3788427/94‑1 (MQ=60)
ATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCA > SRR4302537.3292164/1‑94 (MQ=60)
tttaggtgccacacACCGGTGCACCCGCCAGACGCGCGCC‑C‑TTTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAG < SRR4302537.3388251/80‑1 (MQ=60)
TTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAG < SRR4302537.6186190/94‑1 (MQ=60)
TTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAG > SRR4302537.5120791/1‑94 (MQ=60)
TTTGGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAG < SRR4302537.5564895/94‑1 (MQ=60)
TTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCA > SRR4302537.843921/1‑94 (MQ=60)
tgggcCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAG < SRR4302537.4730328/89‑1 (MQ=60)
GGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGC > SRR4302537.1790578/1‑94 (MQ=60)
GTGCGAACAACCGGTACCCCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCA < SRR4302537.798541/94‑1 (MQ=60)
GTGCGAACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCA > SRR4302537.3929520/1‑94 (MQ=60)
CGAACAACCGGCACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAC < SRR4302537.2827619/94‑1 (MQ=60)
AACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCA > SRR4302537.3879907/1‑94 (MQ=60)
ACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAA > SRR4302537.2862669/1‑94 (MQ=60)
ACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAA > SRR4302537.2839518/1‑94 (MQ=60)
ACAACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAA > SRR4302537.5963363/1‑94 (MQ=60)
CAACCGGTACCCCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAA < SRR4302537.6145026/94‑1 (MQ=60)
CAACCGGTACACCCGCCAGACGCGCG‑G‑CATCTTCATTCCCGCCAATCGCCAGGGTCTTACGACCACAGGTGGTTTTATTCACCAGCAAATCAAA > SRR4302537.4165300/1‑94 (MQ=60)
AACGGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAG < SRR4302537.360769/94‑1 (MQ=60)
AACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAG > SRR4302537.6148541/1‑94 (MQ=60)
ACCGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGA < SRR4302537.4335222/94‑1 (MQ=60)
CGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATA > SRR4302537.68122/1‑94 (MQ=60)
CGGTACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATA > SRR4302537.4186185/1‑94 (MQ=60)
ACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCA < SRR4302537.349169/94‑1 (MQ=60)
ACACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCA < SRR4302537.1378660/94‑1 (MQ=60)
CACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAG < SRR4302537.3193945/94‑1 (MQ=60)
CACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAG < SRR4302537.3523956/94‑1 (MQ=60)
ACCCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGA > SRR4302537.3331853/1‑94 (MQ=60)
CCGCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACA < SRR4302537.3295685/94‑1 (MQ=60)
GCCAGACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACG > SRR4302537.4727575/1‑94 (MQ=60)
GACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGAC > SRR4302537.1978559/1‑94 (MQ=60)
ACGCGCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACG < SRR4302537.134082/94‑1 (MQ=60)
cgcgtcC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTG < SRR4302537.484630/88‑1 (MQ=60)
GCG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGA < SRR4302537.6466511/94‑1 (MQ=60)
CG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAG < SRR4302537.1109524/94‑1 (MQ=60)
CG‑GCC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAG < SRR4302537.1930265/94‑1 (MQ=60)
G‑C‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCC > SRR4302537.1004346/1‑94 (MQ=60)
G‑C‑C‑TCTTCGTTCCCGCCAATCGCCAGGGGGTTACGACCAAAGGTGGGTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCC > SRR4302537.2594972/1‑94 (MQ=60)
ggcC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGC > SRR4302537.2976368/4‑94 (MQ=60)
ggcC‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGC > SRR4302537.5967990/4‑94 (MQ=60)
C‑TCTTCTTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAG < SRR4302537.4447888/94‑1 (MQ=60)
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CCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCG‑G‑C‑TCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAG > NC_000913/1980847‑1981033
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
