Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,011,668 |
A→G |
T140A (ACC→GCC) |
fliF → |
FliF |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,011,668 | 0 | A | G | 100.0%
| 709.5
/ NA
| 205 | T140A (ACC→GCC) | fliF | FliF |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (102/103); total (102/103) |
Only 100 of 212 total aligned reads displayed.
TTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTACCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCT > NC_000913/2011578‑2011757
|
cGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCAt < 2:928929/93‑1 (MQ=255)
cGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCAt < 1:584001/93‑1 (MQ=255)
cGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCAt > 2:5043516/1‑93 (MQ=255)
gAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATc > 1:2399830/1‑93 (MQ=255)
aCTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGa < 1:6367960/93‑1 (MQ=255)
aCTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGa > 2:4584373/1‑93 (MQ=255)
tGCTTGATCAGGAAAAGTTTGGTATCAGCCCGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGaaa > 2:2532119/1‑93 (MQ=255)
tGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGaaa > 1:4488419/1‑93 (MQ=255)
tGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGaaa > 1:3456496/1‑93 (MQ=255)
gCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAAc > 1:2447871/1‑93 (MQ=255)
gCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAAc > 2:3968934/1‑93 (MQ=255)
ttGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTa < 1:4348431/93‑1 (MQ=255)
gATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATc < 2:3737460/93‑1 (MQ=255)
gATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATc < 1:6183854/93‑1 (MQ=255)
gATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATc < 2:5149998/93‑1 (MQ=255)
aTCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCg < 2:5953897/93‑1 (MQ=255)
aGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGcc > 2:4782807/1‑93 (MQ=255)
aGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGcc < 2:1844531/93‑1 (MQ=255)
ggAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGccc < 2:3148868/93‑1 (MQ=255)
gAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCg > 2:4139439/1‑93 (MQ=255)
gAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCg < 2:2578751/93‑1 (MQ=255)
aaaaGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCgg > 1:154667/1‑93 (MQ=255)
aaaaGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCgg > 2:5271170/1‑93 (MQ=255)
aaaaGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCgg < 1:652323/93‑1 (MQ=255)
aaGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTa < 1:3568073/93‑1 (MQ=255)
gTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTaaa < 2:3798919/93‑1 (MQ=255)
tttGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTaaaa < 1:2342184/93‑1 (MQ=255)
tttGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTaaaa < 1:3109608/93‑1 (MQ=255)
ttGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAg > 2:3487443/1‑93 (MQ=255)
ttGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAg < 1:6067499/93‑1 (MQ=255)
ttGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAg > 2:1537453/1‑93 (MQ=255)
tGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAgg > 1:4294944/1‑93 (MQ=255)
tGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAgg > 1:2671608/1‑93 (MQ=255)
aTCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCGTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGgcg > 1:3030403/1‑93 (MQ=255)
tCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGGAAAAGGGgcgc > 2:2011865/1‑93 (MQ=255)
cAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGgcgcg > 2:6139112/1‑93 (MQ=255)
aGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGgcgcgc > 1:5223299/1‑93 (MQ=255)
aGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGgcgcgc > 2:290447/1‑93 (MQ=255)
aGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGgcgcgc > 2:2435394/1‑93 (MQ=255)
aGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGCAAAAGGGgcgcgc > 2:2302730/1‑93 (MQ=255)
cAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGcgcgcgca > 2:2772114/1‑91 (MQ=255)
cAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTa < 2:6232421/93‑1 (MQ=255)
gTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACa > 2:1263576/1‑93 (MQ=255)
gTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACa > 1:3840248/1‑93 (MQ=255)
ttCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACAt > 1:55063/1‑93 (MQ=255)
tCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATc < 1:3794016/93‑1 (MQ=255)
cAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCt < 1:3277424/93‑1 (MQ=255)
cAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCt < 2:6385069/93‑1 (MQ=255)
cAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGACCGGTAAAAGGGGCGCGCGTACATcg > 2:1201759/1‑92 (MQ=255)
aGCGAACAGGGGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTCCCTCTg > 1:5270969/1‑93 (MQ=255)
gCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTgg < 2:1706268/93‑1 (MQ=255)
gAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCa > 2:2174100/1‑93 (MQ=255)
gAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCa > 2:2271260/1‑93 (MQ=255)
gAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCa > 2:1087109/1‑93 (MQ=255)
aaCAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCaa < 2:3244216/93‑1 (MQ=255)
aCAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAAt > 1:3300132/1‑93 (MQ=255)
aCAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAAt < 2:2358274/93‑1 (MQ=255)
aCAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAAt > 1:4031970/1‑93 (MQ=255)
aCAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAAt > 2:5446971/1‑93 (MQ=255)
cAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATg < 1:1407378/93‑1 (MQ=255)
cAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATg < 2:3582439/93‑1 (MQ=255)
cAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATg < 1:2582007/93‑1 (MQ=255)
cAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATg < 2:1439206/93‑1 (MQ=255)
aGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGc < 1:4245627/93‑1 (MQ=255)
aGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGc < 2:5987459/93‑1 (MQ=255)
aaTTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGaac > 1:2173311/1‑92 (MQ=255)
aaTTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGaaa < 1:4779273/93‑1 (MQ=255)
aaTTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGACCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGaaa > 2:3052660/1‑93 (MQ=255)
aTTATCAGCGGGCTGTGGAACGCGAGCTTTCCCGTTCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCCTGCATCTGGCAATGCCGAAAc < 1:2094859/93‑1 (MQ=255)
ttATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAAcc > 2:5495593/1‑93 (MQ=255)
ttATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAAcc > 2:1959837/1‑93 (MQ=255)
tATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCg < 1:1961208/93‑1 (MQ=255)
tacAGGGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGt < 2:6348330/91‑1 (MQ=255)
aTCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGt < 2:1538073/93‑1 (MQ=255)
tCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTc < 2:1782397/93‑1 (MQ=255)
cAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCt < 1:1791090/93‑1 (MQ=255)
aGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCtt < 2:1634719/93‑1 (MQ=255)
aGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCtt < 1:2891083/93‑1 (MQ=255)
aGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCtt < 2:4346681/93‑1 (MQ=255)
gCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCttt > 1:5963599/1‑93 (MQ=255)
gCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCttt > 2:4317421/1‑93 (MQ=255)
cGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTa < 2:653051/93‑1 (MQ=255)
gggCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTAt < 1:1098803/93‑1 (MQ=255)
gggCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTAt < 2:5631397/93‑1 (MQ=255)
ggCGCGGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTAtt < 2:3667902/93‑1 (MQ=255)
gcTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGt > 2:1555459/1‑93 (MQ=255)
aaGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTg > 2:3003340/1‑93 (MQ=255)
gCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAAc < 1:624578/93‑1 (MQ=255)
cGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACa > 2:4583148/1‑93 (MQ=255)
aGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACaaa > 1:3970122/1‑93 (MQ=255)
aGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACaaa > 1:1887429/1‑93 (MQ=255)
tttCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAAt > 1:378138/1‑93 (MQ=255)
ttCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATc > 2:6182030/1‑93 (MQ=255)
ttCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATc > 1:936520/1‑93 (MQ=255)
tctcGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATcc > 1:5414723/1‑93 (MQ=255)
ctcGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATccc < 1:641520/93‑1 (MQ=255)
ctcGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATccc > 1:5095557/1‑93 (MQ=255)
tcGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATcccc < 2:6068312/93‑1 (MQ=255)
tcGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATcccc > 1:2226794/1‑93 (MQ=255)
cGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCATACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCt < 1:4118679/93‑1 (MQ=255)
|
TTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTACCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCT > NC_000913/2011578‑2011757
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTACCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTTCTG > NC_000913/2011575‑2011761
|
GGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTG < SRR4302537.5989969/94‑1 (MQ=60)
GTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGC > SRR4302537.5783976/1‑94 (MQ=60)
TTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCC > SRR4302537.5320806/1‑94 (MQ=60)
TTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCA > SRR4302537.3215627/1‑94 (MQ=60)
TCGAACTTCTTGATCAGGAAAATTCTGATATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCCGGAAGGCGAGCTTTCTCGTGCCAT < SRR4302537.2524768/94‑1 (MQ=60)
CGAACTGCTTGATCAGGAAAAGTTTTGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATC > SRR4302537.2437105/1‑94 (MQ=60)
CGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATC > SRR4302537.2416732/1‑94 (MQ=60)
CGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATC > SRR4302537.3982311/1‑94 (MQ=60)
CGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATC < SRR4302537.587991/94‑1 (MQ=60)
AACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGA > SRR4302537.2895123/1‑94 (MQ=60)
ACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAA < SRR4302537.6411391/94‑1 (MQ=60)
CTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAA > SRR4302537.4519468/1‑94 (MQ=60)
CTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAA > SRR4302537.3867065/1‑94 (MQ=60)
CTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAA > SRR4302537.5292375/1‑94 (MQ=60)
CTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAA > SRR4302537.3480937/1‑94 (MQ=60)
TGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAAC > SRR4302537.2465092/1‑94 (MQ=60)
GCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACT < SRR4302537.4347428/94‑1 (MQ=60)
GCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACT > SRR4302537.2274/1‑94 (MQ=60)
CTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTA > SRR4302537.4234082/1‑94 (MQ=60)
CTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTA < SRR4302537.3605158/94‑1 (MQ=60)
TTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTAT < SRR4302537.4378565/94‑1 (MQ=60)
TTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTAT < SRR4302537.4122254/94‑1 (MQ=60)
TTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTAC > SRR4302537.6044950/1‑94 (MQ=60)
GATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCG < SRR4302537.6226450/94‑1 (MQ=60)
ATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGG > SRR4302537.18017/1‑94 (MQ=60)
GAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGG > SRR4302537.155766/1‑94 (MQ=60)
AAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGT < SRR4302537.1921145/94‑1 (MQ=60)
AAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGT < SRR4302537.656774/94‑1 (MQ=60)
AAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAA < SRR4302537.3593234/94‑1 (MQ=60)
TTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGCGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAG > SRR4302537.6370870/1‑94 (MQ=60)
TTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAG < SRR4302537.2358689/94‑1 (MQ=60)
TTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAG < SRR4302537.3560455/94‑1 (MQ=60)
TTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAG < SRR4302537.3131326/94‑1 (MQ=60)
TTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGG < SRR4302537.6109183/94‑1 (MQ=60)
TTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGG > SRR4302537.4324802/1‑94 (MQ=60)
TTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGG > SRR4302537.2690271/1‑94 (MQ=60)
TGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGG < SRR4302537.6519224/94‑1 (MQ=60)
TGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGG > SRR4302537.5156967/1‑94 (MQ=60)
GGTATCAGCCAGTTCAGCGAACAGGGGAATTATCAGCGGGCGCTGGAAGCCGAGCTTTCTCTTGCCATCGAAACTATCGGCCCGGTAAAAGGGG > SRR4302537.2848681/1‑94 (MQ=60)
GTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGC < SRR4302537.4728539/94‑1 (MQ=60)
GTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGC > SRR4302537.6443400/1‑94 (MQ=60)
TATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCGTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCG > SRR4302537.3051531/1‑94 (MQ=60)
TCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCG > SRR4302537.4299267/1‑94 (MQ=60)
CAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGC > SRR4302537.5259221/1‑94 (MQ=60)
AGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCG > SRR4302537.4390861/1‑94 (MQ=60)
AGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCG > SRR4302537.2140706/1‑94 (MQ=60)
CAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTAC < SRR4302537.4009344/94‑1 (MQ=60)
AGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACA > SRR4302537.5567707/1‑94 (MQ=60)
AGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACA > SRR4302537.3867151/1‑94 (MQ=60)
GTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACAT < SRR4302537.6125292/94‑1 (MQ=60)
GTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACAT > SRR4302537.55471/1‑94 (MQ=60)
TCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCT < SRR4302537.3820643/94‑1 (MQ=60)
CAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTG < SRR4302537.3300556/94‑1 (MQ=60)
CAGCGAACAGGGGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTCCCTCTG > SRR4302537.5307246/1‑94 (MQ=60)
CGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCA > SRR4302537.3321259/1‑94 (MQ=60)
AACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAAT > SRR4302537.4060190/1‑94 (MQ=60)
AACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAAT > SRR4302537.3323467/1‑94 (MQ=60)
ACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATG < SRR4302537.6253702/94‑1 (MQ=60)
CAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGC < SRR4302537.2239660/94‑1 (MQ=60)
CAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGC > SRR4302537.550647/1‑94 (MQ=60)
CAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGC < SRR4302537.1417178/94‑1 (MQ=60)
CAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGC < SRR4302537.2600077/94‑1 (MQ=60)
CAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGC > SRR4302537.3446122/1‑94 (MQ=60)
CAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGC > SRR4302537.4999616/1‑94 (MQ=60)
AGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCC > SRR4302537.2935727/1‑94 (MQ=60)
AGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCC < SRR4302537.4275134/94‑1 (MQ=60)
GAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAC > SRR4302537.2188633/1‑94 (MQ=60)
AATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAAC < SRR4302537.4812270/94‑1 (MQ=60)
ATTATCAGCGGGCTGTGGAACGCGAGCTTTCCCGTTCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCCTGCATCTGGCAATGCCGAAACC < SRR4302537.2109634/94‑1 (MQ=60)
TTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCAATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCG < SRR4302537.5270861/94‑1 (MQ=60)
TATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGT < SRR4302537.1974847/94‑1 (MQ=60)
TCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCT < SRR4302537.1995618/94‑1 (MQ=60)
CAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTT > SRR4302537.1531299/1‑94 (MQ=60)
CAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTT < SRR4302537.1803597/94‑1 (MQ=60)
CAGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTT < SRR4302537.3242786/94‑1 (MQ=60)
AGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTT > SRR4302537.6004531/1‑94 (MQ=60)
AGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTT < SRR4302537.2594902/94‑1 (MQ=60)
AGCGGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTT < SRR4302537.2911378/94‑1 (MQ=60)
GGGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATT < SRR4302537.1106395/94‑1 (MQ=60)
GGCGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTC < SRR4302537.901131/94‑1 (MQ=60)
CGCTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGT < SRR4302537.2328446/94‑1 (MQ=60)
CTGGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCC < SRR4302537.973600/94‑1 (MQ=60)
GGAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGT < SRR4302537.3130662/94‑1 (MQ=60)
GAAGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTG > SRR4302537.2408317/1‑94 (MQ=60)
AGGCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAA < SRR4302537.5899801/94‑1 (MQ=60)
GCGAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACA < SRR4302537.628837/94‑1 (MQ=60)
GAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAA > SRR4302537.1900553/1‑94 (MQ=60)
GAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAA > SRR4302537.3997907/1‑94 (MQ=60)
GAGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAA > SRR4302537.3997906/1‑94 (MQ=60)
AGCTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAA > SRR4302537.3818262/1‑94 (MQ=60)
CTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGTCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAAT > SRR4302537.2637146/1‑94 (MQ=60)
CTTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAAT > SRR4302537.380758/1‑94 (MQ=60)
TTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATC > SRR4302537.6334543/1‑94 (MQ=60)
TTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATC > SRR4302537.942972/1‑94 (MQ=60)
TTTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATC < SRR4302537.1413049/94‑1 (MQ=60)
TTCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCC > SRR4302537.5451642/1‑94 (MQ=60)
TCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCC > SRR4302537.5130647/1‑94 (MQ=60)
TCTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCC < SRR4302537.1867562/94‑1 (MQ=60)
CTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCC > SRR4302537.2242500/1‑94 (MQ=60)
CTCGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCC < SRR4302537.645891/94‑1 (MQ=60)
CGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTT > SRR4302537.3693409/1‑94 (MQ=60)
CGTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCATACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTT < SRR4302537.4147441/94‑1 (MQ=60)
GTGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTTC > SRR4302537.1338003/1‑94 (MQ=60)
TGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTTCT < SRR4302537.742682/94‑1 (MQ=60)
TGCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTTCT > SRR4302537.5053764/1‑94 (MQ=60)
GCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATTCACTTCTG > SRR4302537.2616944/1‑94 (MQ=60)
GCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTTCTG > SRR4302537.1616318/1‑94 (MQ=60)
GCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTTCTG > SRR4302537.6249421/1‑94 (MQ=60)
GCCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTTCTG > SRR4302537.3273533/1‑94 (MQ=60)
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GGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCGCTGGAAGGCGAGCTTTCTCGTACCATCGAAACTATCGGCCCGGTAAAAGGGGCGCGCGTACATCTGGCAATGCCGAAACCGTCTTTATTCGTCCGTGAACAAAAATCCCCTTCTG > NC_000913/2011575‑2011761
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
