Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,563,970 |
A→G |
V312A (GTG→GCG) |
b2451 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,563,970 | 0 | A | G | 100.0%
| 634.6
/ NA
| 185 | V312A (GTG→GCG) | b2451 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (109/76); total (109/76) |
Only 100 of 195 total aligned reads displayed.
CCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCA > NC_000913/2563881‑2564059
|
ccACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCg > 1:648163/1‑93 (MQ=255)
ccACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCg > 1:2207195/1‑93 (MQ=255)
cACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGt > 1:3239793/1‑93 (MQ=255)
cACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGt < 1:4846562/93‑1 (MQ=255)
cACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGt > 2:3103517/1‑93 (MQ=255)
cGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGgc > 2:4653797/1‑93 (MQ=255)
cGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGgc < 1:2586120/93‑1 (MQ=255)
ggCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGgcg > 1:5952890/1‑93 (MQ=255)
gCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGgcgc > 1:3735107/1‑93 (MQ=255)
cAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGgcgcg < 2:4169061/93‑1 (MQ=255)
aaTTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCa > 1:110723/1‑93 (MQ=255)
aaTTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCa < 1:786586/93‑1 (MQ=255)
aaTTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCa < 2:2141839/93‑1 (MQ=255)
tGCGCAGCGTCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACgg < 1:2665989/93‑1 (MQ=255)
tGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACgg > 2:1590751/1‑93 (MQ=255)
gcgcAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGt < 2:1834570/93‑1 (MQ=255)
cgcAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGtt > 2:4552205/1‑93 (MQ=255)
gcAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGttt > 1:3277738/1‑93 (MQ=255)
gcAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGttt > 2:1656252/1‑93 (MQ=255)
gcAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGttt > 2:5429766/1‑93 (MQ=255)
cAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTg < 1:526140/93‑1 (MQ=255)
cAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTg > 1:6254494/1‑93 (MQ=255)
aGCGGCAGTCGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTgc < 2:5795796/93‑1 (MQ=255)
gCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCg > 1:3067503/1‑93 (MQ=255)
gCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCg > 1:2855659/1‑93 (MQ=255)
gTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGaa > 2:5992997/1‑93 (MQ=255)
ttGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGaaa > 2:5373529/1‑93 (MQ=255)
tGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAAc < 2:1714597/93‑1 (MQ=255)
tGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAAc < 1:5745784/93‑1 (MQ=255)
tGTACGCCCGCAAGCCAGATTGGGCTGCAAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAAc < 2:2473403/93‑1 (MQ=255)
tACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTg > 1:1047705/1‑93 (MQ=255)
tACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTg < 2:6070084/93‑1 (MQ=255)
cGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTa > 2:3265997/1‑93 (MQ=255)
ccTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGt > 2:252008/1‑93 (MQ=255)
ccTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGt < 2:4023731/93‑1 (MQ=255)
ccTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGt < 2:3672822/93‑1 (MQ=255)
ccTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGt > 1:2947607/1‑93 (MQ=255)
cAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCa < 1:5680828/93‑1 (MQ=255)
cAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCa < 1:4073841/93‑1 (MQ=255)
gCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCAtct < 2:5038522/93‑1 (MQ=255)
cAGATTGTGCTGCCAGAGAGCGAAAGGGGATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCa > 2:4315462/1‑93 (MQ=255)
gATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACg > 1:2317773/1‑93 (MQ=255)
atggtgCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGc < 2:3956366/90‑1 (MQ=255)
aTTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGc > 2:273878/1‑93 (MQ=255)
tgtgCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAg > 2:2705861/1‑93 (MQ=255)
gtgCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAgg > 1:489713/1‑93 (MQ=255)
gtgCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAgg > 2:1188059/1‑93 (MQ=255)
gctgcCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGgcg > 2:4993077/1‑93 (MQ=255)
gctgcCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATAGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGgcg > 2:5694496/1‑93 (MQ=255)
gcCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCgg > 1:5891823/1‑93 (MQ=255)
ccAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGa < 2:6268010/93‑1 (MQ=255)
cAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGAt < 1:4522766/93‑1 (MQ=255)
cAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGAt > 2:2959917/1‑93 (MQ=255)
agagagCGAAAGGGGATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATg > 2:552094/1‑93 (MQ=255)
gagagCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATgg < 1:360132/93‑1 (MQ=255)
gagagCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATgg > 1:1900647/1‑93 (MQ=255)
gagagCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATgg > 2:4397977/1‑93 (MQ=255)
gagagCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATgg < 2:2848332/93‑1 (MQ=255)
gagagCGAAAGGGGATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCACGCGCGGATgg > 1:332085/1‑93 (MQ=255)
agagCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGt > 2:3796729/1‑93 (MQ=255)
agagCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCAGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGt < 1:6043551/93‑1 (MQ=255)
gagCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTc > 1:38508/1‑93 (MQ=255)
gagCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTc > 1:4771658/1‑93 (MQ=255)
gagCGAAAGGGGATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGCTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGACGGTc > 1:3891863/1‑93 (MQ=255)
agCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCa < 2:130502/93‑1 (MQ=255)
agCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCa > 2:3392523/1‑93 (MQ=255)
agCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCa > 1:2177121/1‑93 (MQ=255)
agCGAAAGGGTATGCGCGCCCGCCCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCa < 2:2339251/93‑1 (MQ=255)
gCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCAt > 2:543598/1‑93 (MQ=255)
gAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGc < 1:569268/93‑1 (MQ=255)
gAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGc < 2:4845260/93‑1 (MQ=255)
aaaGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCa > 2:4806317/1‑93 (MQ=255)
aaaGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCa > 1:5819234/1‑93 (MQ=255)
aGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGACGGTCATGCAgc < 2:4204800/93‑1 (MQ=255)
gggTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAgcg > 1:1605488/1‑93 (MQ=255)
gggTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGAACGTTCATCTCACCCAGGCGCGGATGGTCATGCAgcg > 2:2195623/1‑93 (MQ=255)
ggTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACACAGGCGCGGATGGTCATGCAgcgc > 2:6346104/1‑93 (MQ=255)
gTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCa > 2:1138834/1‑93 (MQ=255)
gTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCa > 1:1474258/1‑93 (MQ=255)
gTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCa > 1:3361515/1‑93 (MQ=255)
tATGCGCGCCCGCGCGAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAg < 1:6221395/93‑1 (MQ=255)
aTGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGt < 1:1015488/93‑1 (MQ=255)
aTGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGt < 2:6208405/93‑1 (MQ=255)
aTGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGt < 1:2697284/93‑1 (MQ=255)
gcgcccgcgccAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGcc > 1:1003016/1‑93 (MQ=255)
gcgcccgcgccAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGcc > 1:4441879/1‑93 (MQ=255)
cccgcgccAATCGCCGTGGCGCGCTCGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCTGTTGCcagc < 2:2193999/93‑1 (MQ=255)
cgcgccAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCcagcag < 1:471764/93‑1 (MQ=255)
cgcgccAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCcagcag > 2:3564672/1‑93 (MQ=255)
gcgccAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCagcagc > 1:2397659/1‑93 (MQ=255)
cgccAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCg < 1:3487818/93‑1 (MQ=255)
gccAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCgg < 2:5241698/93‑1 (MQ=255)
cAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGc > 1:4509942/1‑93 (MQ=255)
aaTCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGcc < 1:4743078/93‑1 (MQ=255)
aaTCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGcc > 1:4885865/1‑93 (MQ=255)
aaTCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGcc < 2:4398995/93‑1 (MQ=255)
aaTCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGcc < 1:6396875/93‑1 (MQ=255)
aTCGCCGTTGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCa < 1:4191367/93‑1 (MQ=255)
aTCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCa > 1:5466992/1‑93 (MQ=255)
aTCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCa > 1:1131955/1‑93 (MQ=255)
|
CCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCA > NC_000913/2563881‑2564059
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCGCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAATAT > NC_000913/2563877‑2564063
|
ATCGCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCG < SRR4302537.2428370/94‑1 (MQ=60)
CGCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGGGCCCGCGCCAATCGCC < SRR4302537.6084736/94‑1 (MQ=60)
GCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCG > SRR4302537.652581/1‑94 (MQ=60)
GCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCG > SRR4302537.2222757/1‑94 (MQ=60)
CCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGT > SRR4302537.3262630/1‑94 (MQ=60)
CACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTG > SRR4302537.6354113/1‑94 (MQ=60)
CACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTG < SRR4302537.4880009/94‑1 (MQ=60)
ACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGG < SRR4302537.480638/94‑1 (MQ=60)
CGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCG < SRR4302537.2604213/94‑1 (MQ=60)
CGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCG > SRR4302537.5993759/1‑94 (MQ=60)
GGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAACGGGTATGCGCGCCCGCGCCAATCGCCCTGGCGC > SRR4302537.3271521/1‑94 (MQ=60)
GGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGC > SRR4302537.3761342/1‑94 (MQ=60)
GCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCG > SRR4302537.4553232/1‑94 (MQ=60)
AAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCA > SRR4302537.111537/1‑94 (MQ=60)
AAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCA > SRR4302537.3006257/1‑94 (MQ=60)
AATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCAC < SRR4302537.791986/94‑1 (MQ=60)
AATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCAC < SRR4302537.2707147/94‑1 (MQ=60)
AATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCAC > SRR4302537.629574/1‑94 (MQ=60)
ATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGGCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACG > SRR4302537.4585683/1‑94 (MQ=60)
TGCGCAGCGTCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGT < SRR4302537.2684612/94‑1 (MQ=60)
GCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTT > SRR4302537.400830/1‑94 (MQ=60)
CGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTT > SRR4302537.3300871/1‑94 (MQ=60)
GCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTG > SRR4302537.6297459/1‑94 (MQ=60)
CAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGC < SRR4302537.529748/94‑1 (MQ=60)
CAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGC < SRR4302537.5828741/94‑1 (MQ=60)
AGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCG < SRR4302537.2650012/94‑1 (MQ=60)
GGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCG < SRR4302537.2193189/94‑1 (MQ=60)
GGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCG > SRR4302537.2875677/1‑94 (MQ=60)
GGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCG > SRR4302537.3088873/1‑94 (MQ=60)
GCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGG > SRR4302537.1049276/1‑94 (MQ=60)
GTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGGATGCGCGCCCGCGCCAATCGCCGTTGCGCGCCCGGTTTGCGCCGGAAA > SRR4302537.3508385/1‑94 (MQ=60)
TGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACT < SRR4302537.5785133/94‑1 (MQ=60)
GTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTG > SRR4302537.1054930/1‑94 (MQ=60)
GTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTG < SRR4302537.6092937/94‑1 (MQ=60)
ccCGCCCCCAAGCAAGATTGTGCGGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAGTCGCCGGGGCGCGCACGGTTTGCGCCGGAAACTGT < SRR4302537.3627044/92‑1 (MQ=60)
TACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGT < SRR4302537.442038/94‑1 (MQ=60)
ACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTA > SRR4302537.3912050/1‑94 (MQ=60)
CGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTAC < SRR4302537.1117731/94‑1 (MQ=60)
CCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGT < SRR4302537.735307/94‑1 (MQ=60)
CCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGT > SRR4302537.2968297/1‑94 (MQ=60)
CCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTT > SRR4302537.2544582/1‑94 (MQ=60)
CCTCAAGCCAGATTGTGCTCCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTT > SRR4302537.3685729/1‑94 (MQ=60)
CTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTC < SRR4302537.2258806/94‑1 (MQ=60)
CTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTC > SRR4302537.3239092/1‑94 (MQ=60)
CAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCAT < SRR4302537.5719686/94‑1 (MQ=60)
CAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCAT < SRR4302537.6039383/94‑1 (MQ=60)
CAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCAT < SRR4302537.4102288/94‑1 (MQ=60)
AAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTGTGAGACGGAAACTGTACGTTGATC > SRR4302537.4754446/1‑94 (MQ=60)
GCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTC > SRR4302537.1611655/1‑94 (MQ=60)
CCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCA < SRR4302537.448540/94‑1 (MQ=60)
AGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACG > SRR4302537.2334141/1‑94 (MQ=60)
AGATTGTGCCGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACG < SRR4302537.1398892/94‑1 (MQ=60)
ATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCA > SRR4302537.271861/1‑94 (MQ=60)
TTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAG < SRR4302537.4778727/94‑1 (MQ=60)
TTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAG > SRR4302537.2033728/1‑94 (MQ=60)
TGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGG > SRR4302537.5760938/1‑94 (MQ=60)
TGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGG > SRR4302537.493076/1‑94 (MQ=60)
TGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGG < SRR4302537.508213/94‑1 (MQ=60)
CTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCG < SRR4302537.4920288/94‑1 (MQ=60)
TGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGG > SRR4302537.5932249/1‑94 (MQ=60)
GCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGA > SRR4302537.5621158/1‑94 (MQ=60)
CAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATG < SRR4302537.4554058/94‑1 (MQ=60)
AGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGG > SRR4302537.1913847/1‑94 (MQ=60)
AGAGAGCGAAAGGGGATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCACGCGCGGATGG > SRR4302537.334383/1‑94 (MQ=60)
GAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGT < SRR4302537.3309028/94‑1 (MQ=60)
GAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGT < SRR4302537.362633/94‑1 (MQ=60)
AGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTC > SRR4302537.38800/1‑94 (MQ=60)
AGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTC > SRR4302537.4804605/1‑94 (MQ=60)
AGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTC < SRR4302537.4898084/94‑1 (MQ=60)
AGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTC < SRR4302537.411109/94‑1 (MQ=60)
AGAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCAGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTC < SRR4302537.6085061/94‑1 (MQ=60)
AGAGCGAAAGGGGATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGCTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGACGGTC > SRR4302537.3919078/1‑94 (MQ=60)
GAGCGAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCA > SRR4302537.2192466/1‑94 (MQ=60)
GAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCA > SRR4302537.5859116/1‑94 (MQ=60)
GAAAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCA < SRR4302537.573179/94‑1 (MQ=60)
AAGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGC > SRR4302537.1107321/1‑94 (MQ=60)
AGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCG > SRR4302537.1638449/1‑94 (MQ=60)
AGGGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCG > SRR4302537.1616716/1‑94 (MQ=60)
GGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCA > SRR4302537.1484504/1‑94 (MQ=60)
GGTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCA > SRR4302537.3385327/1‑94 (MQ=60)
GTATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAG > SRR4302537.2413593/1‑94 (MQ=60)
TATGCGCGCCCGCGCGAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGT < SRR4302537.6264222/94‑1 (MQ=60)
ATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTT < SRR4302537.1022479/94‑1 (MQ=60)
ATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTT < SRR4302537.5959752/94‑1 (MQ=60)
ATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTT < SRR4302537.2716125/94‑1 (MQ=60)
ATGCGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTT < SRR4302537.5333811/94‑1 (MQ=60)
CGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCC > SRR4302537.644937/1‑94 (MQ=60)
CGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCC > SRR4302537.4472556/1‑94 (MQ=60)
CGCGCCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCC > SRR4302537.1009937/1‑94 (MQ=60)
CCCGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCA < SRR4302537.3846129/94‑1 (MQ=60)
CGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGC > SRR4302537.2414546/1‑94 (MQ=60)
CGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGC < SRR4302537.474996/94‑1 (MQ=60)
CGCGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGC < SRR4302537.5904017/94‑1 (MQ=60)
CGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGG > SRR4302537.3591686/1‑94 (MQ=60)
CGCCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGG < SRR4302537.3512485/94‑1 (MQ=60)
CCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGC > SRR4302537.4541125/1‑94 (MQ=60)
CCAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGC < SRR4302537.291660/94‑1 (MQ=60)
CAATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCC > SRR4302537.4919605/1‑94 (MQ=60)
AATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCA < SRR4302537.6440433/94‑1 (MQ=60)
AATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCA > SRR4302537.5504282/1‑94 (MQ=60)
AATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCA > SRR4302537.1139813/1‑94 (MQ=60)
AATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCA < SRR4302537.4775856/94‑1 (MQ=60)
ATCGCCGTTGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAA < SRR4302537.4220642/94‑1 (MQ=60)
ATCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCAAGCAGTGCAGTTGCCAGCAGCGGGCCAA > SRR4302537.5653832/1‑94 (MQ=60)
TCGCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAAT < SRR4302537.4921636/94‑1 (MQ=60)
GCCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCCCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAATAT < SRR4302537.609894/94‑1 (MQ=60)
|
ATCGCCACCGGCAAATTGCGCAGCGGCAGTTGTACGCCCTCAAGCCAGATTGTGCTGCCAGAGAGCGAAAGGGTATGCGCGCCCGCGCCAATCACCGTGGCGCGCACGGTTTGCGCCGGAAACTGTACGTTCATCTCACGCAGGCGCGGATGGTCATGCAGCGCAGTTGCCAGCAGCGGGCCAATAT > NC_000913/2563877‑2564063
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
