Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,820,144 |
Δ1 bp |
intergenic (+24/+18) |
b4542 → / ← oraA |
hypothetical protein/OraA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,820,143 | 0 | G | . | 100.0%
| 971.2
/ NA
| 205 | intergenic (+23/+19) | b4542/oraA | hypothetical protein/OraA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (104/101); total (104/101) |
Only 100 of 214 total aligned reads displayed.
GCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGC > NC_000913/2820051‑2820231
|
gCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAg > 1:3240378/1‑93 (MQ=255)
gCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAg > 1:410247/1‑93 (MQ=255)
tAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgta > 2:3120902/1‑91 (MQ=255)
tAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAAATGAACAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgta > 1:4370031/1‑91 (MQ=255)
aaCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAgtaa < 1:3048737/93‑4 (MQ=255)
cGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTaaaa > 2:2288992/1‑93 (MQ=255)
gAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAAt < 2:3921899/93‑1 (MQ=255)
atatCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATAcc < 1:4663668/93‑1 (MQ=255)
atatCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATAcc > 2:3862347/1‑93 (MQ=255)
atatCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATAcc < 1:1748364/93‑1 (MQ=255)
tCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTa < 2:6114788/93‑1 (MQ=255)
cGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTAt > 2:722834/1‑93 (MQ=255)
cGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTAt < 2:1566980/93‑1 (MQ=255)
gCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATg > 1:4727831/1‑93 (MQ=255)
ccaccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGc > 2:2752709/1‑93 (MQ=255)
ccaccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGc > 1:5172962/1‑93 (MQ=255)
caccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCg > 1:1012440/1‑93 (MQ=255)
accaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGt > 1:2283608/1‑93 (MQ=255)
accaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGt > 2:336338/1‑93 (MQ=255)
accaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGt < 2:3565155/93‑1 (MQ=255)
caGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTc > 1:2737658/1‑93 (MQ=255)
aGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAATATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCa < 1:3461392/93‑1 (MQ=255)
aGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCa < 1:3161381/93‑1 (MQ=255)
aGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCa < 1:3566863/93‑1 (MQ=255)
gCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGGAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAg > 1:2636918/1‑93 (MQ=255)
cccAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTc < 2:5604281/92‑1 (MQ=255)
ccAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCg > 2:1013996/1‑93 (MQ=255)
gtgtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCaaa > 2:5882047/1‑93 (MQ=255)
tgtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCaaaa > 1:4691830/1‑93 (MQ=255)
tgtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTCGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCaaaa > 2:4725660/1‑93 (MQ=255)
tCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAAtt < 2:4450701/93‑1 (MQ=255)
ttAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc < 1:1072350/93‑1 (MQ=255)
ttAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc > 2:2723295/1‑93 (MQ=255)
ttAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc > 2:5714357/1‑93 (MQ=255)
aaCCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGc < 1:76477/93‑1 (MQ=255)
aaCCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGCAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGc < 2:2024531/93‑1 (MQ=255)
aCCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGcc < 1:5070102/93‑1 (MQ=255)
aCCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGcc > 2:2381587/1‑93 (MQ=255)
ccgccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCa > 2:4966593/1‑93 (MQ=255)
cgccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCaa < 1:3263536/93‑1 (MQ=255)
gccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCaaa > 2:1161716/1‑93 (MQ=255)
gccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCaaa < 1:5100569/93‑1 (MQ=255)
ccgTGCTGGTAACTGAAAAGTGCGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATCCCGTATGCGTTCAGTCGGCAAAATTTCCCCAAAt < 2:1439818/93‑1 (MQ=255)
gggCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtct > 1:1655869/1‑93 (MQ=255)
gggCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtct < 2:3692413/93‑1 (MQ=255)
ggCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAtctc > 1:3323368/1‑93 (MQ=255)
gCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTcc > 2:2432459/1‑93 (MQ=255)
ggTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTgg > 1:2673109/1‑93 (MQ=255)
aaCTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGata > 2:1224687/1‑93 (MQ=255)
aaCTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGata < 1:4205305/93‑1 (MQ=255)
aaCTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGata < 2:1917938/93‑1 (MQ=255)
aaCTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGata > 2:6168945/1‑93 (MQ=255)
aaCTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGata < 1:3201502/93‑1 (MQ=255)
gAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCtt > 1:3362229/1‑93 (MQ=255)
aaaaGTGGGAATAAGATAGGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGCCAAAATTTCGCCAAATCTCCTGGATATCTTc < 2:74452/93‑1 (MQ=255)
aaaaGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTc < 1:2943555/93‑1 (MQ=255)
aaaGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTcc > 1:2017449/1‑93 (MQ=255)
aaGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCa > 2:5158194/1‑93 (MQ=255)
aaGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCa < 2:1797741/93‑1 (MQ=255)
gTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATc < 2:131248/93‑1 (MQ=255)
gTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATc < 2:4521566/93‑1 (MQ=255)
tGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCa > 1:2111744/1‑93 (MQ=255)
ggAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGa > 1:5401798/1‑93 (MQ=255)
gAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGAt < 2:5366089/93‑1 (MQ=255)
gAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGAt < 1:4673070/93‑1 (MQ=255)
aaTAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATa < 2:328027/93‑1 (MQ=255)
aaTAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATa < 2:5519817/93‑1 (MQ=255)
ataagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAg < 2:4003530/93‑1 (MQ=255)
ataagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAg < 1:2955988/93‑1 (MQ=255)
taagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGc > 1:1788315/1‑93 (MQ=255)
taagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGc > 2:6399767/1‑93 (MQ=255)
aagataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGcc < 1:2405210/93‑1 (MQ=255)
agataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCa > 1:5061831/1‑93 (MQ=255)
gataagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCAc < 2:2797355/93‑1 (MQ=255)
taagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGa > 1:6108256/1‑93 (MQ=255)
taagTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGa > 2:5090542/1‑93 (MQ=255)
agTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATa > 1:5819384/1‑93 (MQ=255)
agTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATa > 1:5209693/1‑93 (MQ=255)
agTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATa > 2:4070844/1‑93 (MQ=255)
ttttCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATaga < 1:428344/93‑1 (MQ=255)
ttCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGc > 1:5929484/1‑93 (MQ=255)
ttCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGc > 1:3691354/1‑93 (MQ=255)
ttCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGc < 1:5477329/93‑1 (MQ=255)
tCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCa > 1:3874276/1‑93 (MQ=255)
tCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCa > 1:6123278/1‑93 (MQ=255)
cTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAg < 2:4342532/93‑1 (MQ=255)
ttGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGa > 2:4129872/1‑93 (MQ=255)
ttGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGa > 1:5410553/1‑93 (MQ=255)
tGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCACaa > 1:6207341/1‑93 (MQ=255)
aCTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGaaaa < 2:6259887/93‑1 (MQ=255)
aCTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGaaaa > 1:73738/1‑93 (MQ=255)
aCTGGGAA‑GTAAAATACCGTATGCGTACAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGaaaa < 2:2529660/93‑1 (MQ=255)
cTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAc < 1:4489336/93‑1 (MQ=255)
cTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAc < 2:1640740/93‑1 (MQ=255)
cTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAc > 1:673579/1‑93 (MQ=255)
cTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAc > 1:1811953/1‑93 (MQ=255)
cTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAc < 1:947896/93‑1 (MQ=255)
tGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACg > 1:4630907/1‑93 (MQ=255)
tGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACg < 2:2359979/93‑1 (MQ=255)
gggAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGc > 1:601486/1‑93 (MQ=255)
|
GCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGC > NC_000913/2820051‑2820231
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATC > NC_000913/2820054‑2820237
|
AACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAA < SRR4302537.3069979/94‑1 (MQ=60)
CGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAAT < SRR4302537.2241922/94‑1 (MQ=60)
CGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCAGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAAT < SRR4302537.4243364/94‑1 (MQ=60)
GAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATA < SRR4302537.1745213/94‑1 (MQ=60)
GAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATA < SRR4302537.4720660/94‑1 (MQ=60)
GAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAAATGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATA < SRR4302537.526433/94‑1 (MQ=60)
AAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATAC < SRR4302537.5458382/94‑1 (MQ=60)
AATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACC < SRR4302537.4133798/94‑1 (MQ=60)
ATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCG > SRR4302537.3000987/1‑94 (MQ=60)
ATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCG < SRR4302537.4695900/94‑1 (MQ=60)
ATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCG < SRR4302537.1760558/94‑1 (MQ=60)
CGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATG < SRR4302537.1818253/94‑1 (MQ=60)
CGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATG > SRR4302537.4760509/1‑94 (MQ=60)
CGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATG < SRR4302537.3362744/94‑1 (MQ=60)
GCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGC > SRR4302537.5208572/1‑94 (MQ=60)
CCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCG > SRR4302537.333908/1‑94 (MQ=60)
CCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCG > SRR4302537.1019418/1‑94 (MQ=60)
CCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCG < SRR4302537.3441759/94‑1 (MQ=60)
CCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCG > SRR4302537.6319620/1‑94 (MQ=60)
CACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGT > SRR4302537.2299719/1‑94 (MQ=60)
CACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGT > SRR4302537.5155096/1‑94 (MQ=60)
CCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTC > SRR4302537.2756765/1‑94 (MQ=60)
CAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCA < SRR4302537.211749/94‑1 (MQ=60)
CAGCTCCAGCGTGTCTTAACCGCCGGGCTGGGAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCA > SRR4302537.3277120/1‑94 (MQ=60)
AGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGGAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAG > SRR4302537.2655365/1‑94 (MQ=60)
AGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAATATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAG < SRR4302537.3485861/94‑1 (MQ=60)
AGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAG < SRR4302537.3183573/94‑1 (MQ=60)
AGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAG < SRR4302537.3592015/94‑1 (MQ=60)
TCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCG > SRR4302537.4874730/1‑94 (MQ=60)
TCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCG < SRR4302537.4743278/94‑1 (MQ=60)
CCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGG < SRR4302537.2744490/94‑1 (MQ=60)
CAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGC > SRR4302537.3205926/1‑94 (MQ=60)
CAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGC > SRR4302537.1070092/1‑94 (MQ=60)
CGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAA > SRR4302537.5106399/1‑94 (MQ=60)
GTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAA > SRR4302537.4724281/1‑94 (MQ=60)
TCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTT < SRR4302537.3551020/94‑1 (MQ=60)
CTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTC < SRR4302537.1300362/94‑1 (MQ=60)
CTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTC < SRR4302537.3108587/94‑1 (MQ=60)
TTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCG < SRR4302537.1079742/94‑1 (MQ=60)
TTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCG > SRR4302537.36629/1‑94 (MQ=60)
AACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCC < SRR4302537.77038/94‑1 (MQ=60)
ACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCA < SRR4302537.5105004/94‑1 (MQ=60)
CGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAA < SRR4302537.3286556/94‑1 (MQ=60)
GCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAT < SRR4302537.5135711/94‑1 (MQ=60)
CGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCT > SRR4302537.1667475/1‑94 (MQ=60)
GGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGTAAAATTTCGCCAAATCTC > SRR4302537.4356425/1‑94 (MQ=60)
GGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTC > SRR4302537.3346882/1‑94 (MQ=60)
GCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCT < SRR4302537.3821300/94‑1 (MQ=60)
GCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCT > SRR4302537.2989504/1‑94 (MQ=60)
GCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCT < SRR4302537.4510128/94‑1 (MQ=60)
TGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGG > SRR4302537.2691778/1‑94 (MQ=60)
TGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGG < SRR4302537.1782000/94‑1 (MQ=60)
GTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGAT < SRR4302537.6152769/94‑1 (MQ=60)
AACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATAT < SRR4302537.757044/94‑1 (MQ=60)
AACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATAT < SRR4302537.4234654/94‑1 (MQ=60)
AACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATAT < SRR4302537.3224011/94‑1 (MQ=60)
CTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCT > SRR4302537.466852/1‑94 (MQ=60)
TGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTT > SRR4302537.825506/1‑94 (MQ=60)
TGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTT > SRR4302537.3386045/1‑94 (MQ=60)
TGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTT > SRR4302537.5930139/1‑94 (MQ=60)
TGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTT < SRR4302537.544039/94‑1 (MQ=60)
GAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTC < SRR4302537.5974599/94‑1 (MQ=60)
AAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCC > SRR4302537.2031512/1‑94 (MQ=60)
AAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCC < SRR4302537.2964217/94‑1 (MQ=60)
AGTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATC > SRR4302537.5489237/1‑94 (MQ=60)
GTGGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCA > SRR4302537.2126626/1‑94 (MQ=60)
TGGGAATAAGATAAGTTTTCTTTACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAG < SRR4302537.2221666/94‑1 (MQ=60)
GGGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGA > SRR4302537.5438663/1‑94 (MQ=60)
GGAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGAT < SRR4302537.3248624/94‑1 (MQ=60)
GAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATA < SRR4302537.1889515/94‑1 (MQ=60)
GAATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATA < SRR4302537.4705400/94‑1 (MQ=60)
AATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATGCCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAG < SRR4302537.6515410/94‑1 (MQ=60)
AATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAG < SRR4302537.5103171/94‑1 (MQ=60)
ATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGC > SRR4302537.1800810/1‑94 (MQ=60)
ATAAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGC < SRR4302537.2976728/94‑1 (MQ=60)
AAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCA < SRR4302537.2422141/94‑1 (MQ=60)
AAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCA > SRR4302537.4392588/1‑94 (MQ=60)
AAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCA > SRR4302537.2965584/1‑94 (MQ=60)
AAGATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCA > SRR4302537.5096678/1‑94 (MQ=60)
GATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACG > SRR4302537.2887979/1‑94 (MQ=60)
ATAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGA > SRR4302537.6150231/1‑94 (MQ=60)
TAAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGAT < SRR4302537.4705305/94‑1 (MQ=60)
AAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATA > SRR4302537.5859267/1‑94 (MQ=60)
AAGTTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATA > SRR4302537.5245521/1‑94 (MQ=60)
TTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAG < SRR4302537.431325/94‑1 (MQ=60)
TTTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAG > SRR4302537.5576032/1‑94 (MQ=60)
TTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCCAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGC > SRR4302537.3449195/1‑94 (MQ=60)
TTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGC > SRR4302537.5970172/1‑94 (MQ=60)
TTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGC < SRR4302537.5238610/94‑1 (MQ=60)
TTTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGC > SRR4302537.3717326/1‑94 (MQ=60)
TTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCA < SRR4302537.5514718/94‑1 (MQ=60)
TTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCA > SRR4302537.3901378/1‑94 (MQ=60)
TTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCA > SRR4302537.6165373/1‑94 (MQ=60)
TTCTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCA > SRR4302537.6057786/1‑94 (MQ=60)
CTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGA < SRR4302537.6205685/94‑1 (MQ=60)
CTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGA > SRR4302537.5447449/1‑94 (MQ=60)
CTTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGA < SRR4302537.727767/94‑1 (MQ=60)
TTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAA > SRR4302537.2660819/1‑94 (MQ=60)
TTGACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCACAA > SRR4302537.6250112/1‑94 (MQ=60)
GACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAA > SRR4302537.74279/1‑94 (MQ=60)
GACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAA > SRR4302537.250423/1‑94 (MQ=60)
ACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAC < SRR4302537.4125107/94‑1 (MQ=60)
ACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAC > SRR4302537.678189/1‑94 (MQ=60)
ACTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAAC > SRR4302537.1824582/1‑94 (MQ=60)
CTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACG < SRR4302537.954453/94‑1 (MQ=60)
CTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACG > SRR4302537.4921400/1‑94 (MQ=60)
CTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACG > SRR4302537.4662945/1‑94 (MQ=60)
CTGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACG < SRR4302537.4520390/94‑1 (MQ=60)
TGGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGC > SRR4302537.605599/1‑94 (MQ=60)
GGGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCT < SRR4302537.2328494/94‑1 (MQ=60)
GGAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTG < SRR4302537.177313/94‑1 (MQ=60)
GAA‑GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGG < SRR4302537.1058474/94‑1 (MQ=60)
AAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGA < SRR4302537.5696464/94‑1 (MQ=60)
AAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGA < SRR4302537.4157610/94‑1 (MQ=60)
AAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGA < SRR4302537.12486/94‑1 (MQ=60)
AGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAT > SRR4302537.4426896/1‑94 (MQ=60)
AGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAT < SRR4302537.3876538/94‑1 (MQ=60)
AGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAT < SRR4302537.2416656/94‑1 (MQ=60)
GTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATC > SRR4302537.4676131/1‑94 (MQ=60)
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AACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATC > NC_000913/2820054‑2820237
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
