Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,174,443 |
T→C |
H136R (CAC→CGC) |
icc ← |
Icc |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,174,443 | 0 | T | C | 100.0%
| 770.4
/ NA
| 221 | H136R (CAC→CGC) | icc | Icc |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (116/105); total (116/105) |
Only 100 of 232 total aligned reads displayed.
TGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCATCC > NC_000913/3174353‑3174532
|
tgatgatgCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCgcgc < 2:4397198/93‑1 (MQ=255)
gatgatgCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACcgcgcg > 1:3131758/1‑93 (MQ=255)
gatgatgCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACcgcgcg > 2:1015327/1‑93 (MQ=255)
gatgatgCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACcgcgcg > 1:2002144/1‑93 (MQ=255)
gatgatgCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACcgcgcg > 2:786298/1‑93 (MQ=255)
atgatgCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCgg > 2:5288564/1‑93 (MQ=255)
gcagcagcagcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGc > 2:4208831/1‑93 (MQ=255)
cagcagcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCaaa > 1:2589771/1‑93 (MQ=255)
cagcagcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTAAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCaaa < 2:5632370/93‑1 (MQ=255)
gcagcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAaca < 2:4956566/93‑1 (MQ=255)
cagcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAacac > 2:1282001/1‑93 (MQ=255)
cagcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAacac < 1:2906777/93‑1 (MQ=255)
agcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACAcc > 2:2938125/1‑93 (MQ=255)
agcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACAcc < 2:1937835/93‑1 (MQ=255)
agcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACAcc > 2:1929868/1‑93 (MQ=255)
agcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACAcc > 2:5197015/1‑93 (MQ=255)
gcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCt < 2:4373019/93‑1 (MQ=255)
gcaACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCt > 1:4973268/1‑93 (MQ=255)
gcaACGTATGGCGTGCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACAACt < 1:4598088/93‑1 (MQ=255)
aaCGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTgg > 2:627624/1‑93 (MQ=255)
gTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTa > 1:4228883/1‑93 (MQ=255)
tATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTAt > 1:4850981/1‑93 (MQ=255)
aTGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATc > 1:991982/1‑93 (MQ=255)
tGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATcc < 2:32517/93‑1 (MQ=255)
ggCGTTGTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCa < 1:2513362/93‑1 (MQ=255)
ggCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCa < 1:244054/93‑1 (MQ=255)
ggCGTTCTGGCGCATCGGCCAGTTTACGTCCCAGCCACTCAAGCTGAACCTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCa < 2:3387653/93‑1 (MQ=255)
gCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAg > 2:3303364/1‑93 (MQ=255)
cGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGc > 1:3994802/1‑93 (MQ=255)
cGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGc > 2:5090866/1‑93 (MQ=255)
gTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCa > 1:4253476/1‑93 (MQ=255)
tcgggCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAAc < 2:910520/90‑1 (MQ=255)
tCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAAc < 2:2859599/93‑1 (MQ=255)
cgcATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGAt < 1:5941731/93‑1 (MQ=255)
cATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGAttt > 1:1243205/1‑93 (MQ=255)
cATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGAttt < 1:5870108/93‑1 (MQ=255)
cATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGAttt < 1:3854042/93‑1 (MQ=255)
aTCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTg > 2:202247/1‑93 (MQ=255)
gCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCAt > 1:1429637/1‑93 (MQ=255)
ccAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCAtt > 1:5130404/1‑93 (MQ=255)
ccAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCAtt < 2:5932681/93‑1 (MQ=255)
gTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCt < 1:5630305/93‑1 (MQ=255)
tttACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTc < 2:6046030/93‑1 (MQ=255)
tACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCAc > 1:264859/1‑93 (MQ=255)
tACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCAc > 2:5030999/1‑93 (MQ=255)
cGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCa > 1:2749524/1‑93 (MQ=255)
gTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCaa > 2:475714/1‑93 (MQ=255)
gTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCaa < 1:3428500/93‑1 (MQ=255)
ttCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAAt > 2:2561235/1‑93 (MQ=255)
ttCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAAt < 1:4504071/93‑1 (MQ=255)
tCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATa > 2:2069093/1‑93 (MQ=255)
cAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATaaa > 2:6226727/1‑93 (MQ=255)
aGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAac > 2:5472836/1‑93 (MQ=255)
aGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAac < 1:2990234/93‑1 (MQ=255)
aGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAac < 1:116377/93‑1 (MQ=255)
gCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAaca > 2:3960750/1‑93 (MQ=255)
gCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAaca < 2:2771886/93‑1 (MQ=255)
gCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAaca > 2:235246/1‑93 (MQ=255)
ccACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAacac > 2:4519787/1‑93 (MQ=255)
cACTCAAGCTGAAGCTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACAcg < 2:191009/93‑1 (MQ=255)
cACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACAcg < 1:5333306/93‑1 (MQ=255)
cACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACAcg < 2:2474623/93‑1 (MQ=255)
cTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACAcgcg > 2:4128207/1‑93 (MQ=255)
tCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACgcgc > 1:6309640/1‑93 (MQ=255)
tCAAGCAGAAACTCGCTCAGCTCACCGCGCAGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACgcgc < 1:367222/93‑1 (MQ=255)
cAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCt < 1:5257298/93‑1 (MQ=255)
aaGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCCATAAACACGCGCtt > 2:1483488/1‑93 (MQ=255)
aaGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCtt > 2:3274614/1‑93 (MQ=255)
aGCTGAAGCTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTc < 2:1841008/93‑1 (MQ=255)
aGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTc < 2:1688224/93‑1 (MQ=255)
aGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTc > 1:3869010/1‑93 (MQ=255)
aGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTc > 2:6389301/1‑93 (MQ=255)
gCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCg > 1:2874352/1‑93 (MQ=255)
gCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCg > 1:821366/1‑93 (MQ=255)
cTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGc > 2:3559296/1‑93 (MQ=255)
cTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGc > 2:3772726/1‑93 (MQ=255)
tGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCGACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGcc < 2:2151485/93‑1 (MQ=255)
tGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGcc > 2:1228476/1‑93 (MQ=255)
gAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCg > 2:1813649/1‑93 (MQ=255)
aaaccTCGCTCAGCTCCCCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCg < 2:1157257/89‑1 (MQ=255)
aaaCTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCgg > 1:2175663/1‑93 (MQ=255)
aaaCTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCgg < 1:1505056/93‑1 (MQ=255)
aaCTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCggg < 1:979830/93‑1 (MQ=255)
aCTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCgggg > 1:4117280/1‑93 (MQ=255)
cTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGga < 1:4237479/93‑1 (MQ=255)
tCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGgag > 2:2298045/1‑93 (MQ=255)
tCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGgag > 1:1710193/1‑93 (MQ=255)
cGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGgaga < 1:5751193/93‑1 (MQ=255)
cGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGgaga > 2:2165632/1‑93 (MQ=255)
gctcagctcaCCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGAt < 1:4809954/93‑1 (MQ=255)
ctcagctcaCCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATa < 1:6209284/93‑1 (MQ=255)
ctcagctcaCCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATa < 1:5494840/93‑1 (MQ=255)
ctcagctcaCCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATa > 1:4322550/1‑93 (MQ=255)
tcagctcaCCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATAc > 1:4920469/1‑93 (MQ=255)
cagctcaCCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATAcc > 2:3495221/1‑93 (MQ=255)
agctcaCCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATAccc < 2:3445881/93‑1 (MQ=255)
tcaCCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCa < 1:2704819/93‑1 (MQ=255)
tcaCCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCa < 2:3849361/93‑1 (MQ=255)
caCCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCAt < 2:3505698/93‑1 (MQ=255)
ccGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCATcc < 2:2659649/93‑1 (MQ=255)
|
TGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCATCC > NC_000913/3174353‑3174532
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCATCCTG > NC_000913/3174350‑3174534
|
GGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGC > SRR4302537.6090988/1‑94 (MQ=60)
GGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGC > SRR4302537.5918874/1‑94 (MQ=60)
GATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCG < SRR4302537.1840068/94‑1 (MQ=60)
ATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGC > SRR4302537.2678229/1‑94 (MQ=60)
TGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCG > SRR4302537.3153726/1‑94 (MQ=60)
TGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCG > SRR4302537.2016067/1‑94 (MQ=60)
GATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGG > SRR4302537.4306435/1‑94 (MQ=60)
GATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGG < SRR4302537.2951691/94‑1 (MQ=60)
ATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGC > SRR4302537.3893190/1‑94 (MQ=60)
TGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCA > SRR4302537.1593375/1‑94 (MQ=60)
TGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCA > SRR4302537.5811392/1‑94 (MQ=60)
GATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCAC > SRR4302537.6310007/1‑94 (MQ=60)
TGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGC > SRR4302537.3803644/1‑94 (MQ=60)
GCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCC < SRR4302537.2738862/94‑1 (MQ=60)
GCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAA > SRR4302537.2607894/1‑94 (MQ=60)
AGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACA > SRR4302537.361589/1‑94 (MQ=60)
GCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACAC < SRR4302537.1213633/94‑1 (MQ=60)
GCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACAC < SRR4302537.2580706/94‑1 (MQ=60)
CAGCAACTTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACC < SRR4302537.1486848/94‑1 (MQ=60)
CAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACC < SRR4302537.2927197/94‑1 (MQ=60)
CAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACC > SRR4302537.4703223/1‑94 (MQ=60)
AGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCT > SRR4302537.5007547/1‑94 (MQ=60)
AGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCAACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCT < SRR4302537.4685258/94‑1 (MQ=60)
GCAACGTATGGCGTGCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACAACTG < SRR4302537.4629910/94‑1 (MQ=60)
catcgtatggccatctgaacCATCGGCCTGTTTACGTACCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGG < SRR4302537.5679054/74‑1 (MQ=60)
AACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGC > SRR4302537.6127379/1‑94 (MQ=60)
ACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCT < SRR4302537.4263886/94‑1 (MQ=60)
ACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCT > SRR4302537.5629257/1‑94 (MQ=60)
CGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTA > SRR4302537.4258327/1‑94 (MQ=60)
GTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTAT > SRR4302537.4884449/1‑94 (MQ=60)
TATTGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATC > SRR4302537.730594/1‑94 (MQ=60)
TATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATC > SRR4302537.998834/1‑94 (MQ=60)
ATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCC > SRR4302537.6009385/1‑94 (MQ=60)
gacattctggagcatgggcaatttagCGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAG < SRR4302537.1876400/68‑1 (MQ=60)
GGCGTTGTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAG < SRR4302537.2531031/94‑1 (MQ=60)
GGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAG < SRR4302537.245785/94‑1 (MQ=60)
GGCGTTCGGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAG < SRR4302537.4140821/94‑1 (MQ=60)
GCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGC > SRR4302537.4022766/1‑94 (MQ=60)
CGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCA > SRR4302537.4283041/1‑94 (MQ=60)
GTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAA > SRR4302537.1523122/1‑94 (MQ=60)
GTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAA > SRR4302537.2901301/1‑94 (MQ=60)
TGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGG < SRR4302537.4281306/94‑1 (MQ=60)
GCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGAT < SRR4302537.99592/94‑1 (MQ=60)
GCGCATCGGCCAGTTTACGTCCCAGCCACTCAAGCTGAACCTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGAT < SRR4302537.3124292/94‑1 (MQ=60)
CGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATT < SRR4302537.5982512/94‑1 (MQ=60)
GCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTT > SRR4302537.5949525/1‑94 (MQ=60)
GCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTT > SRR4302537.1251866/1‑94 (MQ=60)
CATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTG < SRR4302537.5910375/94‑1 (MQ=60)
CATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTG < SRR4302537.4933417/94‑1 (MQ=60)
CATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTG < SRR4302537.3881024/94‑1 (MQ=60)
GGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCAT > SRR4302537.1439588/1‑94 (MQ=60)
GCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATT > SRR4302537.5165761/1‑94 (MQ=60)
CCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTG < SRR4302537.2840716/94‑1 (MQ=60)
CAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGC < SRR4302537.4873740/94‑1 (MQ=60)
AGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCT > SRR4302537.2620483/1‑94 (MQ=60)
GTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTC < SRR4302537.5668823/94‑1 (MQ=60)
GTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTC > SRR4302537.4601231/1‑94 (MQ=60)
TTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCAC > SRR4302537.266720/1‑94 (MQ=60)
TTACGTGCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCAC < SRR4302537.4082546/94‑1 (MQ=60)
TACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACC < SRR4302537.839554/94‑1 (MQ=60)
TACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTACCATTGCTCACC > SRR4302537.3092121/1‑94 (MQ=60)
ACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCA > SRR4302537.5127559/1‑94 (MQ=60)
ACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCA > SRR4302537.2768705/1‑94 (MQ=60)
ACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCA > SRR4302537.5768734/1‑94 (MQ=60)
CGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAA > SRR4302537.5322864/1‑94 (MQ=60)
CGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAA < SRR4302537.5469142/94‑1 (MQ=60)
GTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAAT < SRR4302537.3452765/94‑1 (MQ=60)
TTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATA < SRR4302537.4535218/94‑1 (MQ=60)
CCAGCCACCCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAA < SRR4302537.4218836/94‑1 (MQ=60)
AGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACA < SRR4302537.117218/94‑1 (MQ=60)
AGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACA < SRR4302537.3338736/94‑1 (MQ=60)
AGCCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACA < SRR4302537.3011113/94‑1 (MQ=60)
CCACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACG < SRR4302537.4427385/94‑1 (MQ=60)
CACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGC > SRR4302537.126283/1‑94 (MQ=60)
CACTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGC < SRR4302537.5369882/94‑1 (MQ=60)
CTCAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGC > SRR4302537.6352840/1‑94 (MQ=60)
TCAAGCAGAAACTCGCTCAGCTCACCGCGCAGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCT < SRR4302537.369770/94‑1 (MQ=60)
CAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTT > SRR4302537.2848945/1‑94 (MQ=60)
CAAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTT < SRR4302537.5293477/94‑1 (MQ=60)
AAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTC > SRR4302537.3896087/1‑94 (MQ=60)
AAGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTC > SRR4302537.875791/1‑94 (MQ=60)
AGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCG > SRR4302537.2437741/1‑94 (MQ=60)
AGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCG > SRR4302537.827003/1‑94 (MQ=60)
AGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCG < SRR4302537.4973382/94‑1 (MQ=60)
AGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCG < SRR4302537.3863566/94‑1 (MQ=60)
AGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCG > SRR4302537.2894524/1‑94 (MQ=60)
AGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCG < SRR4302537.5231347/94‑1 (MQ=60)
AGCTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCG > SRR4302537.3915252/1‑94 (MQ=60)
CTGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCC < SRR4302537.4270688/94‑1 (MQ=60)
TGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCG > SRR4302537.2160815/1‑94 (MQ=60)
TGAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCG > SRR4302537.249905/1‑94 (MQ=60)
GAAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGG > SRR4302537.2190999/1‑94 (MQ=60)
AAACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGG < SRR4302537.1515557/94‑1 (MQ=60)
AACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGG < SRR4302537.986594/94‑1 (MQ=60)
AACTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGG > SRR4302537.4146033/1‑94 (MQ=60)
CTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAG > SRR4302537.1722140/1‑94 (MQ=60)
CTCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAG < SRR4302537.4266954/94‑1 (MQ=60)
TCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGA > SRR4302537.2211867/1‑94 (MQ=60)
TCGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGA > SRR4302537.4962758/1‑94 (MQ=60)
CGCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGAT < SRR4302537.5790591/94‑1 (MQ=60)
GCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATA < SRR4302537.2639880/94‑1 (MQ=60)
GCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATA > SRR4302537.4352602/1‑94 (MQ=60)
GCTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATA < SRR4302537.4843156/94‑1 (MQ=60)
CTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATAC < SRR4302537.6252065/94‑1 (MQ=60)
CTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATAC < SRR4302537.5532354/94‑1 (MQ=60)
CTCAGCTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATAC > SRR4302537.4954412/1‑94 (MQ=60)
CTCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCA > SRR4302537.5321908/1‑94 (MQ=60)
TCACCGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCAT < SRR4302537.2723700/94‑1 (MQ=60)
CGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCATCCTG > SRR4302537.729063/1‑94 (MQ=60)
CGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCATCCTG < SRR4302537.6114654/94‑1 (MQ=60)
CGCGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCATCCTG < SRR4302537.3999980/94‑1 (MQ=60)
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GGATGATGATGCAGCAGCAGCAACGTATGGCGTTCTGGCGCATCGGCCAGTTTACGTTCCAGCCACTCAAGCTGAAACTCGCTCAGCTCACCGTGCGGCACGCCAAACACCTGGCTATCCAGCAACAGGATTTGCCATTGCTCACCAATAAACACGCGCTTCGCCGGGGAGATACCCGCATCCTG > NC_000913/3174350‑3174534
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
