Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,057,759 |
+C |
coding (1773/1776 nt) |
yihK → |
putative GTP‑binding factor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,057,758 | 1 | . | C | 98.9%
| 944.6
/ 1.7
| 267 | coding (1772/1776 nt) | yihK | putative GTP‑binding factor |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base C (142/122); total (143/124) |
| Fisher's exact test for biased strand distribution p-value = 5.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.96e-01 |
Only 100 of 296 total aligned reads displayed.
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAT > NC_000913/4057666‑4057844
|
tCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑cc > 2:1261483/1‑92 (MQ=255)
tCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑cc > 2:438503/1‑92 (MQ=255)
ccGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑cct < 1:3330927/93‑3 (MQ=255)
ccGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑cct < 1:4885705/93‑3 (MQ=255)
ccGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑cct < 2:5293118/93‑3 (MQ=255)
gCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑cctga > 1:920012/1‑89 (MQ=255)
tGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACgg > 1:3211939/1‑93 (MQ=255)
aCTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGaa > 2:949782/1‑93 (MQ=255)
ctctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGaaa > 2:1995835/1‑93 (MQ=255)
tctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTTAACGTCACCTGACGGaaaa < 2:6326293/93‑1 (MQ=255)
ctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAAc < 1:443476/93‑1 (MQ=255)
ctGGAACAAGCGCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAAc < 1:4400630/93‑1 (MQ=255)
tGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAGCg > 2:3844058/1‑93 (MQ=255)
tGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACg > 1:2139884/1‑93 (MQ=255)
tGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACg > 1:3800814/1‑93 (MQ=255)
ggAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGa > 2:5506626/1‑93 (MQ=255)
ggAACAAGCTCTGAAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGa > 2:4539182/1‑93 (MQ=255)
gAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGAAAAACGAt > 1:4142966/1‑93 (MQ=255)
aaCAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAtc < 1:4695691/93‑1 (MQ=255)
cAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGCAAAAGAtcgt > 1:1210746/1‑93 (MQ=255)
cAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAtcgt > 1:584947/1‑93 (MQ=255)
aGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAtcgtcg > 2:3470452/1‑93 (MQ=255)
gCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTcgc > 2:6261663/1‑93 (MQ=255)
ctctGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTcgcc < 2:1570392/93‑1 (MQ=255)
tGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCcgcg > 2:5581130/1‑93 (MQ=255)
tGGAGTTCATCGATGATGACGAACTGGCAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGAcgcg > 2:670392/1‑93 (MQ=255)
ggAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCgcgc < 1:500825/93‑1 (MQ=255)
gAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGcc < 1:107902/93‑1 (MQ=255)
gTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGGCGCGCCaa > 2:4100144/1‑93 (MQ=255)
ttCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAAc > 1:5288516/1‑93 (MQ=255)
tCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAAcc < 1:6164148/93‑1 (MQ=255)
aTCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACcgc > 2:4475285/1‑93 (MQ=255)
tCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACcgcg > 1:6325628/1‑93 (MQ=255)
tCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACcgcg > 2:4867718/1‑93 (MQ=255)
gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCa > 1:2675261/1‑93 (MQ=255)
gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCa > 2:176212/1‑93 (MQ=255)
gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCa < 1:979458/93‑1 (MQ=255)
gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCa > 1:242901/1‑93 (MQ=255)
gatgatGACGAACTGGTAGAAGTGACGCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCa < 2:5217936/93‑1 (MQ=255)
atgatgACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAc > 1:4578194/1‑93 (MQ=255)
tgatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAcc > 1:6074826/1‑93 (MQ=255)
gatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCg > 2:2628960/1‑93 (MQ=255)
gatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCg > 1:27481/1‑93 (MQ=255)
tgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGaa > 2:5821958/1‑93 (MQ=255)
gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGaaa < 2:6347631/93‑1 (MQ=255)
gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGaaa < 2:1094422/93‑1 (MQ=255)
aCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAg < 2:4908472/93‑1 (MQ=255)
cGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGa < 2:6405404/93‑1 (MQ=255)
cGAACTGGTAGAAGTGACTCCGACCTCTATCAGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGa < 1:5540802/93‑1 (MQ=255)
gAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGAc < 1:37212/93‑1 (MQ=255)
aaCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACg > 2:2528719/1‑93 (MQ=255)
aCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGa > 2:708850/1‑93 (MQ=255)
aCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGa > 2:2874202/1‑93 (MQ=255)
cTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAt < 1:1292304/93‑1 (MQ=255)
cTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAt < 2:6184925/93‑1 (MQ=255)
tGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAtt > 2:5940973/1‑93 (MQ=255)
tGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAtt < 2:2279548/93‑1 (MQ=255)
gTAGAAGTGCCTCAGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAACCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTaa < 2:121079/93‑1 (MQ=255)
gTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTaa < 1:346959/93‑1 (MQ=255)
gAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAttt < 1:1032091/93‑1 (MQ=255)
gTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGt > 2:4768892/1‑93 (MQ=255)
gTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGt > 2:2764489/1‑93 (MQ=255)
tGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtt < 1:5930922/93‑1 (MQ=255)
tGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtt > 1:2019541/1‑93 (MQ=255)
gACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGttt > 1:3904747/1‑93 (MQ=255)
aCTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtttt < 1:5591503/93‑1 (MQ=255)
cTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGttttt > 2:3651394/1‑93 (MQ=255)
ccGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGGCGATTAATTTCGTTTTTTa > 1:4242541/1‑93 (MQ=255)
ccGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTa < 1:3592057/93‑1 (MQ=255)
aCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTc > 1:3524010/1‑93 (MQ=255)
aCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTc > 1:844092/1‑93 (MQ=255)
aCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTc > 2:825866/1‑93 (MQ=255)
ccTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCa > 2:4250020/1‑93 (MQ=255)
ccTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCa < 2:2959420/93‑1 (MQ=255)
ctctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAt < 1:5054940/93‑1 (MQ=255)
ctctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAt < 2:6055595/93‑1 (MQ=255)
ctctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAt < 2:4694520/93‑1 (MQ=255)
ctctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTAGTTTTTTAGTCAt > 2:4315526/1‑93 (MQ=255)
tctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATa > 1:3119312/1‑93 (MQ=255)
tATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaa < 1:5133480/93‑1 (MQ=255)
tATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaa > 1:2103374/1‑93 (MQ=255)
aTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaa < 2:4642633/93‑1 (MQ=255)
aTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaa > 2:3762654/1‑93 (MQ=255)
tCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaca > 2:2090628/1‑91 (MQ=255)
cGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAc > 1:1514714/1‑93 (MQ=255)
cGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAc > 2:2326154/1‑93 (MQ=255)
gTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAcc > 1:1909337/1‑93 (MQ=255)
gTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAcc < 1:1799692/93‑1 (MQ=255)
tATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCt > 2:3320342/1‑93 (MQ=255)
tATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCt < 2:1870124/93‑1 (MQ=255)
tATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCt > 2:5156630/1‑93 (MQ=255)
aTTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTg > 2:325431/1‑93 (MQ=255)
ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGc > 1:1737964/1‑93 (MQ=255)
ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGc > 1:2848251/1‑93 (MQ=255)
ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGc < 2:5031699/93‑1 (MQ=255)
cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCa < 2:1593322/93‑1 (MQ=255)
cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCa < 1:2334601/93‑1 (MQ=255)
gTAAACGTCACCTGACGAAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAg < 2:2402421/93‑1 (MQ=255)
aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGa < 2:1922440/93‑1 (MQ=255)
aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt > 1:4980212/1‑93 (MQ=255)
|
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAT > NC_000913/4057666‑4057844
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑C‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > NC_000913/4057669‑4057852
|
CCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑Cctg < SRR4302537.3354494/94‑4 (MQ=60)
CCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑Cctg < SRR4302537.4919445/94‑4 (MQ=60)
CCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑Cctg < SRR4302537.5028997/94‑4 (MQ=60)
CGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGA > SRR4302537.926363/1‑94 (MQ=60)
CGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGA > SRR4302537.174941/1‑94 (MQ=60)
CGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGA > SRR4302537.3687061/1‑94 (MQ=60)
CGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGA < SRR4302537.2100684/94‑1 (MQ=60)
CATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACG > SRR4302537.3701460/1‑94 (MQ=60)
ATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGG > SRR4302537.3234531/1‑94 (MQ=60)
ATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGG < SRR4302537.89637/94‑1 (MQ=60)
TGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGA > SRR4302537.4403066/1‑94 (MQ=60)
GACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAA < SRR4302537.5483281/94‑1 (MQ=60)
GACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAA > SRR4302537.1385036/1‑94 (MQ=60)
tcgCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGTCTCCGACCTCTATCCGTATTCGTAAACGTCC‑C‑C‑TGACGGAAA < SRR4302537.5256935/91‑1 (MQ=60)
ACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAA > SRR4302537.5540906/1‑94 (MQ=60)
CTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAA > SRR4302537.2761398/1‑94 (MQ=60)
TCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAAC < SRR4302537.4436847/94‑1 (MQ=60)
CTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACG < SRR4302537.446556/94‑1 (MQ=60)
CTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACG > SRR4302537.2154948/1‑94 (MQ=60)
CTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACG > SRR4302537.3117670/1‑94 (MQ=60)
CTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACG > SRR4302537.3827481/1‑94 (MQ=60)
CTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACG < SRR4302537.128092/94‑1 (MQ=60)
CTGGAACAAGCGCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACG < SRR4302537.4430998/94‑1 (MQ=60)
TGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGA > SRR4302537.2613709/1‑94 (MQ=60)
GGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGAT > SRR4302537.2029976/1‑94 (MQ=60)
GGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGAT < SRR4302537.3502801/94‑1 (MQ=60)
GGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGAAAAACGAT > SRR4302537.4171865/1‑94 (MQ=60)
GAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATC < SRR4302537.6137349/94‑1 (MQ=60)
AACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCG < SRR4302537.4728178/94‑1 (MQ=60)
ACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGCAAAAGATCGT > SRR4302537.1219171/1‑94 (MQ=60)
ACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGT > SRR4302537.5586881/1‑94 (MQ=60)
ACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGT > SRR4302537.588939/1‑94 (MQ=60)
CAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTC < SRR4302537.1757345/94‑1 (MQ=60)
CAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTC > SRR4302537.2419026/1‑94 (MQ=60)
AAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCG < SRR4302537.319690/94‑1 (MQ=60)
AAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCG < SRR4302537.1186661/94‑1 (MQ=60)
AGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGC > SRR4302537.2269404/1‑94 (MQ=60)
AGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGC > SRR4302537.1732538/1‑94 (MQ=60)
AGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGC > SRR4302537.1246333/1‑94 (MQ=60)
GCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCC < SRR4302537.926477/94‑1 (MQ=60)
CTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCG > SRR4302537.4554726/1‑94 (MQ=60)
CTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCG < SRR4302537.4950103/94‑1 (MQ=60)
GGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCC > SRR4302537.4613544/1‑94 (MQ=60)
GGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCC < SRR4302537.504270/94‑1 (MQ=60)
GGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCC > SRR4302537.4425503/1‑94 (MQ=60)
GAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCA < SRR4302537.108690/94‑1 (MQ=60)
GTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAAC > SRR4302537.2140177/1‑94 (MQ=60)
GTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAAC > SRR4302537.5324870/1‑94 (MQ=60)
GTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAAC > SRR4302537.6452699/1‑94 (MQ=60)
TTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACC < SRR4302537.1857092/94‑1 (MQ=60)
TCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCG < SRR4302537.6206576/94‑1 (MQ=60)
ATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCG > SRR4302537.6368896/1‑94 (MQ=60)
CGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCA > SRR4302537.2693947/1‑94 (MQ=60)
CGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCA > SRR4302537.244621/1‑94 (MQ=60)
GATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAC > SRR4302537.4609873/1‑94 (MQ=60)
GATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAC < SRR4302537.986220/94‑1 (MQ=60)
GATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGAGCAC > SRR4302537.5615676/1‑94 (MQ=60)
ATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACC > SRR4302537.6116573/1‑94 (MQ=60)
ATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACC < SRR4302537.3410526/94‑1 (MQ=60)
TGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCG > SRR4302537.27696/1‑94 (MQ=60)
ATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAA > SRR4302537.5996842/1‑94 (MQ=60)
ATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAA > SRR4302537.360286/1‑94 (MQ=60)
TGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGACA > SRR4302537.2781930/1‑94 (MQ=60)
TGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAA < SRR4302537.4799870/94‑1 (MQ=60)
GACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAG < SRR4302537.5018391/94‑1 (MQ=60)
ACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGA > SRR4302537.6375478/1‑94 (MQ=60)
CGAACTGGTAGAAGTGACTCCGACCTCTATCAGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGAC < SRR4302537.5578633/94‑1 (MQ=60)
GAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACG < SRR4302537.37495/94‑1 (MQ=60)
CTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATT < SRR4302537.1301291/94‑1 (MQ=60)
TGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTA > SRR4302537.6093358/1‑94 (MQ=60)
GTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAT > SRR4302537.1003216/1‑94 (MQ=60)
GTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAT < SRR4302537.349369/94‑1 (MQ=60)
AGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTT > SRR4302537.3238638/1‑94 (MQ=60)
AGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTT < SRR4302537.1832365/94‑1 (MQ=60)
AGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTT < SRR4302537.2749463/94‑1 (MQ=60)
GAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTC < SRR4302537.1039201/94‑1 (MQ=60)
AAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCG < SRR4302537.5047344/94‑1 (MQ=60)
atgcCTCCGACCTCTATCCGTATTCGTAACCGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTT < SRR4302537.6305695/90‑1 (MQ=60)
GTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTT > SRR4302537.2033626/1‑94 (MQ=60)
GTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTT > SRR4302537.2801647/1‑94 (MQ=60)
GTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTT < SRR4302537.2637995/94‑1 (MQ=60)
TGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTT > SRR4302537.3932046/1‑94 (MQ=60)
TGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTT < SRR4302537.5971613/94‑1 (MQ=60)
GACCCCGACCTCTATCCGTATTCGTAACCGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTT < SRR4302537.1886407/94‑1 (MQ=60)
ACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTT < SRR4302537.4269287/94‑1 (MQ=60)
ACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTT < SRR4302537.5629732/94‑1 (MQ=60)
CTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTT < SRR4302537.1942181/94‑1 (MQ=60)
CTCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTT < SRR4302537.2150335/94‑1 (MQ=60)
TCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGGCGATTAATTTCGTTTTTTA > SRR4302537.4272035/1‑94 (MQ=60)
TCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTA < SRR4302537.4809472/94‑1 (MQ=60)
TCCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTA > SRR4302537.4561476/1‑94 (MQ=60)
CCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAG < SRR4302537.5905967/94‑1 (MQ=60)
CCGACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAG < SRR4302537.3617379/94‑1 (MQ=60)
CGACCTCTATCCGTATTCGTAAACGT‑C‑A‑CTTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGT > SRR4302537.4704944/1‑94 (MQ=60)
GACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTC > SRR4302537.3548940/1‑94 (MQ=60)
GACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTC > SRR4302537.849876/1‑94 (MQ=60)
ACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCA < SRR4302537.4459856/94‑1 (MQ=60)
ACCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCA > SRR4302537.5157166/1‑94 (MQ=60)
CCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT < SRR4302537.2318849/94‑1 (MQ=60)
CCTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT > SRR4302537.3912480/1‑94 (MQ=60)
CTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATA < SRR4302537.5089739/94‑1 (MQ=60)
CTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATA > SRR4302537.3141113/1‑94 (MQ=60)
CTCTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATA > SRR4302537.1807341/1‑94 (MQ=60)
CTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAA > SRR4302537.3262315/1‑94 (MQ=60)
CTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAA > SRR4302537.2118204/1‑94 (MQ=60)
CTATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAA < SRR4302537.5203851/94‑1 (MQ=60)
TATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAA < SRR4302537.3781676/94‑1 (MQ=60)
TATCCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAA < SRR4302537.5168851/94‑1 (MQ=60)
CCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAC > SRR4302537.1065791/1‑94 (MQ=60)
CCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAC > SRR4302537.3398669/1‑94 (MQ=60)
CCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAC < SRR4302537.6334758/94‑1 (MQ=60)
CCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAC > SRR4302537.1317575/1‑94 (MQ=60)
CCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAC > SRR4302537.1525299/1‑94 (MQ=60)
CCGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAC < SRR4302537.2412837/94‑1 (MQ=60)
CGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACC < SRR4302537.3166950/94‑1 (MQ=60)
CGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACC > SRR4302537.4977946/1‑94 (MQ=60)
CGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACC > SRR4302537.6156587/1‑94 (MQ=60)
CGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACC > SRR4302537.5724705/1‑94 (MQ=60)
CGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACC > SRR4302537.3939723/1‑94 (MQ=60)
CGTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACC > SRR4302537.1922593/1‑94 (MQ=60)
GTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCT < SRR4302537.5765279/94‑1 (MQ=60)
GTATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCT < SRR4302537.1812252/94‑1 (MQ=60)
TATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTG > SRR4302537.5042950/1‑94 (MQ=60)
TATTCGTAAACGC‑C‑ACC‑TGACGGAAAACGATCGTCGCCTCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTG < SRR4302537.3569259/94‑1 (MQ=60)
ATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCTAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGC < SRR4302537.984311/94‑1 (MQ=60)
ATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGC > SRR4302537.5909815/1‑94 (MQ=60)
ATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGC < SRR4302537.3814442/94‑1 (MQ=60)
ATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGC > SRR4302537.1750083/1‑94 (MQ=60)
ATTCGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGC > SRR4302537.2868194/1‑94 (MQ=60)
CGTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAG < SRR4302537.2351055/94‑1 (MQ=60)
CGTAAACGT‑C‑A‑CGTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAG < SRR4302537.3032398/94‑1 (MQ=60)
GTAAACGT‑CGC‑C‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGC < SRR4302537.5229029/94‑1 (MQ=60)
GTAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGC > SRR4302537.5124666/1‑94 (MQ=60)
TAAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCG < SRR4302537.2093272/94‑1 (MQ=60)
AAACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGA > SRR4302537.1128750/1‑94 (MQ=60)
AACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAT > SRR4302537.5014536/1‑94 (MQ=60)
AACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAT < SRR4302537.3914104/94‑1 (MQ=60)
AACGT‑C‑ACC‑TGAAGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAT < SRR4302537.916603/94‑1 (MQ=60)
ACGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATG < SRR4302537.4117155/94‑1 (MQ=60)
CGT‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGG > SRR4302537.692663/1‑94 (MQ=60)
T‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA < SRR4302537.231618/94‑1 (MQ=60)
T‑C‑ACC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA < SRR4302537.6498957/94‑1 (MQ=60)
cacC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAG < SRR4302537.1516586/91‑1 (MQ=60)
acC‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG > SRR4302537.2900802/3‑94 (MQ=60)
C‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > SRR4302537.3851103/1‑94 (MQ=60)
C‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > SRR4302537.1201750/1‑94 (MQ=60)
C‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT < SRR4302537.2755051/94‑1 (MQ=60)
C‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > SRR4302537.4874411/1‑94 (MQ=60)
C‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > SRR4302537.4159564/1‑94 (MQ=60)
C‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > SRR4302537.1780198/1‑94 (MQ=60)
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CCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑C‑A‑C‑TGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > NC_000913/4057669‑4057852
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
