Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 882 254.4 12957588 98.0% 12698436 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,478,527 Δ1 bp intergenic (+36/+23) yjgN → / ← valS hypothetical protein/valine tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,478,5270G.100.0% 1159.5 / NA 246intergenic (+36/+23)yjgN/valShypothetical protein/valine tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (124/122);  total (124/122)

Only 100 of 261 total aligned reads displayed.

AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCA  >  NC_000913/4478437‑4478614
                                                                                          |                                                                                       
aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGttt                                                                                    >  2:3089612/1‑93 (MQ=255)
aGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGttt                                                                                    >  2:5766370/1‑93 (MQ=255)
 ggCTTCTTAGCCAGTATTTCAGGGGGATTTATGCCTTCTTTACCATTTGTGTAAGAGATAAAAAGGGCCGGAGCTTGCTCCGGCCTTCGtttt                                                                                   <  2:5520910/93‑1 (MQ=255)
 ggCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGtttt                                                                                   <  1:4572330/93‑1 (MQ=255)
   cttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtca                                                                                 <  1:886375/93‑1 (MQ=255)
   cttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtca                                                                                 <  1:5084838/93‑1 (MQ=255)
    ttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtcat                                                                                <  1:5055326/93‑1 (MQ=255)
    ttcttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTtcat                                                                                >  1:3084471/1‑93 (MQ=255)
       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCAc                                                                             <  1:1831508/93‑1 (MQ=255)
       ttAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCACCGGCCTTCGTTTTCATCAc                                                                             >  1:5546897/1‑93 (MQ=255)
         aGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACtg                                                                           <  1:388502/93‑1 (MQ=255)
         aGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACtg                                                                           >  2:5397266/1‑93 (MQ=255)
         aGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACtg                                                                           <  1:3021200/93‑1 (MQ=255)
          gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACtgt                                                                          <  2:2092575/93‑1 (MQ=255)
          gCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACtgt                                                                          <  1:5921444/93‑1 (MQ=255)
            cAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTgtgt                                                                        <  1:4355128/93‑1 (MQ=255)
             aGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGtt                                                                       <  2:2897420/93‑1 (MQ=255)
              gTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGttt                                                                      >  2:4262614/1‑93 (MQ=255)
               tATTTCACGGGGCGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGtttt                                                                     >  1:3803364/1‑93 (MQ=255)
               tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGtttt                                                                     <  1:2001233/93‑1 (MQ=255)
               tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGtttt                                                                     <  2:3920857/93‑1 (MQ=255)
               tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGtttt                                                                     <  2:1307573/93‑1 (MQ=255)
               tATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGtttt                                                                     <  2:1109353/93‑1 (MQ=255)
                aTTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTg                                                                    <  2:5009601/93‑1 (MQ=255)
                aTTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTg                                                                    <  1:4982842/93‑1 (MQ=255)
                 tttCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGa                                                                   <  2:1736819/93‑1 (MQ=255)
                   tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAtt                                                                 >  2:5093097/1‑93 (MQ=255)
                   tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAtt                                                                 <  2:1851201/93‑1 (MQ=255)
                   tCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAtt                                                                 <  1:1039699/93‑1 (MQ=255)
                     ccGGGGAGTTATTCCTTCTTTACCATTTCTGTAAGAAATAAAAAAAGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTAc                                                               <  2:6162193/92‑1 (MQ=255)
                      cGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACa                                                              <  1:5207419/93‑1 (MQ=255)
                       ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAg                                                             <  2:6378332/93‑1 (MQ=255)
                       ggggAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAg                                                             <  2:882181/93‑1 (MQ=255)
                          gAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAgcgg                                                          >  1:3687503/1‑92 (MQ=255)
                          gAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAgcgc                                                          >  1:3606508/1‑93 (MQ=255)
                             ttATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCgcggc                                                       >  2:6252007/1‑93 (MQ=255)
                             ttATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGAgcggc                                                       >  1:5590422/1‑93 (MQ=255)
                               aTGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGa                                                     <  2:1699324/93‑1 (MQ=255)
                               aTGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGa                                                     >  2:1984500/1‑93 (MQ=255)
                                 gCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                                                   >  1:4064282/1‑93 (MQ=255)
                                 gCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                                                   >  1:2519146/1‑93 (MQ=255)
                                 gCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                                                   >  2:5270532/1‑93 (MQ=255)
                                 gCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATa                                                   >  2:2427393/1‑93 (MQ=255)
                                  ccTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATaa                                                  >  2:839202/1‑93 (MQ=255)
                                   cttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAc                                                 >  1:942461/1‑93 (MQ=255)
                                   cttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGGTTTGATTACAGCGCGGCGATAAc                                                 >  2:257628/1‑93 (MQ=255)
                                    ttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGTTTACAGCGCGGCGATAACa                                                >  1:1235881/1‑93 (MQ=255)
                                    ttcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACa                                                >  1:1484848/1‑93 (MQ=255)
                                     tcttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAg                                               >  2:5367647/1‑93 (MQ=255)
                                      cttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGc                                              >  2:4390073/1‑93 (MQ=255)
                                      cttTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCCGCCTTCGTTTTCATCACTGTGTTTTTATTACAGCGCGGCGATAACAGc                                              >  2:4609178/1‑93 (MQ=255)
                                       tttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGcc                                             >  2:927292/1‑93 (MQ=255)
                                       tttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGcc                                             <  2:1583017/93‑1 (MQ=255)
                                       tttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCCGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGcc                                             >  1:5986873/1‑93 (MQ=255)
                                        ttACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCct                                            <  1:2371348/93‑1 (MQ=255)
                                          aCCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgc                                          >  1:5263439/1‑93 (MQ=255)
                                           ccATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgct                                         <  1:1936555/93‑1 (MQ=255)
                                            cATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCctgctg                                        >  2:3277749/1‑93 (MQ=255)
                                             aTTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGt                                       <  1:1976770/93‑1 (MQ=255)
                                                tCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCa                                    >  1:2207029/1‑93 (MQ=255)
                                                 cTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCaa                                   >  1:4791453/1‑93 (MQ=255)
                                                   gTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTTATCACTGTGTTTTGATTACAGCGCGGCGATAAAAGCCTGCTGTTCAATc                                 >  2:356890/1‑93 (MQ=255)
                                                   gTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATc                                 >  1:1543523/1‑93 (MQ=255)
                                                     aaGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAg                               <  2:3179204/93‑1 (MQ=255)
                                                      agagATAAAAAAGGCCGGAGCATGCTCCGGGCTTCGTTTTTATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCCGCTGTTCAATCAGt                              >  2:165601/1‑93 (MQ=255)
                                                      agagATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGt                              <  1:3429716/93‑1 (MQ=255)
                                                       gagaTAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTTATCACTGTGTTTTGATTACAGCGCGGGGGTAAAAGCCCTCTGGTCAATCAggt                             >  2:1212746/1‑91 (MQ=255)
                                                       gagaTAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtt                             <  2:2707525/93‑1 (MQ=255)
                                                         agataaaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGttt                            <  1:5899293/89‑1 (MQ=255)
                                                          gataaaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttc                           <  1:5774173/90‑1 (MQ=255)
                                                          gataaaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttc                           <  1:609708/90‑1 (MQ=255)
                                                          gataaaaaaGACCGGAGCATGCTCCGGCCTTCGTTTTCATCATTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGGTCAATCAGtttc                           >  2:3951150/4‑93 (MQ=255)
                                                            taaaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttctc                         <  2:4069887/92‑3 (MQ=255)
                                                             taaaaaGGTCGGAGTTTGCTCTTGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgct                        <  1:6342311/92‑1 (MQ=255)
                                                             aaaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgct                        <  1:3498768/93‑1 (MQ=255)
                                                             aaaaaaGCCCGGAGCATGCTCGGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgct                        <  2:5688959/93‑1 (MQ=255)
                                                              aaaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctt                       <  1:1615718/93‑1 (MQ=255)
                                                               aaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgcttt                      <  1:3866898/93‑1 (MQ=255)
                                                               aaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgcttt                      <  1:3973679/93‑1 (MQ=255)
                                                               aaaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgcttt                      >  2:4664790/1‑93 (MQ=255)
                                                                aaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc                     >  1:2144915/1‑93 (MQ=255)
                                                                aaaGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttc                     >  2:2364146/1‑93 (MQ=255)
                                                                  aGGCCGGAGCATCCCCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGtttcgctttcgc                   <  1:4405008/93‑1 (MQ=255)
                                                                   ggCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTttcgctttcgct                  >  1:320239/1‑93 (MQ=255)
                                                                   ggCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTttcgctttcgct                  >  1:2260085/1‑93 (MQ=255)
                                                                   ggCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTttcgctttcgct                  <  2:3441342/93‑1 (MQ=255)
                                                                       cggagcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTcc               >  1:2786864/5‑93 (MQ=255)
                                                                       cggagcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTcc               >  1:2603669/5‑93 (MQ=255)
                                                                       cggagcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTcc               >  1:2906424/5‑93 (MQ=255)
                                                                       cggagcaggcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTcc               <  1:1394000/89‑1 (MQ=255)
                                                                        ggagcatgcTCCGGCCTTCGTTTTCATCACTGGGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCg              >  2:6440902/4‑93 (MQ=255)
                                                                         gagcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGc             >  1:2543730/3‑93 (MQ=255)
                                                                          agcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCa            <  1:4265564/92‑1 (MQ=255)
                                                                           gcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCAt           <  1:1884232/93‑1 (MQ=255)
                                                                           gcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCAt           >  1:394360/1‑93 (MQ=255)
                                                                           gcatgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCAt           >  1:630884/1‑93 (MQ=255)
                                                                            catgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATa          >  2:4817749/1‑93 (MQ=255)
                                                                             atgcTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAg         <  1:5989189/93‑1 (MQ=255)
                                                                                cTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCt      <  2:766756/93‑1 (MQ=255)
                                                                                  ccGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTc    >  1:869399/1‑93 (MQ=255)
                                                                                          |                                                                                       
AGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCA  >  NC_000913/4478437‑4478614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCT  >  NC_000913/4478435‑4478620
                                                                                             |                                                                                             
AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTT                                                                                           >  SRR4302537.2324738/1‑94 (MQ=60)
AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTT                                                                                           >  SRR4302537.106912/1‑94 (MQ=60)
AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTT                                                                                           >  SRR4302537.6132801/1‑94 (MQ=60)
AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTT                                                                                           >  SRR4302537.5565219/1‑94 (MQ=60)
AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTT                                                                                           >  SRR4302537.654663/1‑94 (MQ=60)
   GGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTC                                                                                        >  SRR4302537.4894123/1‑94 (MQ=60)
   GGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTC                                                                                        >  SRR4302537.5787240/1‑94 (MQ=60)
   GGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTC                                                                                        >  SRR4302537.1889267/1‑94 (MQ=60)
   GGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTC                                                                                        <  SRR4302537.4603982/94‑1 (MQ=60)
    GCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCA                                                                                       >  SRR4302537.4529817/1‑94 (MQ=60)
     CTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                                      >  SRR4302537.3105962/1‑94 (MQ=60)
     CTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                                      <  SRR4302537.5119833/94‑1 (MQ=60)
     CTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                                      >  SRR4302537.3973194/1‑94 (MQ=60)
     CTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCAT                                                                                      <  SRR4302537.892474/94‑1 (MQ=60)
      TTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATC                                                                                     <  SRR4302537.5090128/94‑1 (MQ=60)
      TTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATC                                                                                     >  SRR4302537.4371821/1‑94 (MQ=60)
      TTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATC                                                                                     >  SRR4302537.3166186/1‑94 (MQ=60)
        CTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCACCGGCCTTCGTTTTCATCAC                                                                                   >  SRR4302537.5584772/1‑94 (MQ=60)
         TTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACT                                                                                  <  SRR4302537.1844266/94‑1 (MQ=60)
          TAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTG                                                                                 <  SRR4302537.1498595/94‑1 (MQ=60)
           AGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGT                                                                                <  SRR4302537.391188/94‑1 (MQ=60)
           AGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGT                                                                                <  SRR4302537.476580/94‑1 (MQ=60)
           AGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGT                                                                                <  SRR4302537.3042260/94‑1 (MQ=60)
            GCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTG                                                                               <  SRR4302537.5962075/94‑1 (MQ=60)
             CCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGT                                                                              >  SRR4302537.5959174/1‑94 (MQ=60)
             CCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGT                                                                              >  SRR4302537.2009378/1‑94 (MQ=60)
              CAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTT                                                                             <  SRR4302537.4385279/94‑1 (MQ=60)
              CAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTT                                                                             <  SRR4302537.4130234/94‑1 (MQ=60)
              CAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTT                                                                             >  SRR4302537.717279/1‑94 (MQ=60)
                GTATTTCACGGGGCGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTT                                                                           >  SRR4302537.3830040/1‑94 (MQ=60)
                 TATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTG                                                                          >  SRR4302537.2611013/1‑94 (MQ=60)
                 TATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTG                                                                          <  SRR4302537.2015149/94‑1 (MQ=60)
                 TATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTG                                                                          <  SRR4302537.3875723/94‑1 (MQ=60)
                  ATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGA                                                                         <  SRR4302537.5017185/94‑1 (MQ=60)
                   TTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAT                                                                        <  SRR4302537.1421062/94‑1 (MQ=60)
                   TTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGAT                                                                        >  SRR4302537.636049/1‑94 (MQ=60)
                    TTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATT                                                                       >  SRR4302537.88162/1‑94 (MQ=60)
                    TTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATT                                                                       <  SRR4302537.6122909/94‑1 (MQ=60)
                     TCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTA                                                                      <  SRR4302537.1046854/94‑1 (MQ=60)
                       ACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACA                                                                    <  SRR4302537.5106731/94‑1 (MQ=60)
                       ACGGCGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACA                                                                    <  SRR4302537.6029744/94‑1 (MQ=60)
                        CGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAG                                                                   >  SRR4302537.3959192/1‑94 (MQ=60)
                        CGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAG                                                                   <  SRR4302537.5243235/94‑1 (MQ=60)
                          GGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCG                                                                 >  SRR4302537.5522255/1‑94 (MQ=60)
                          GGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCG                                                                 >  SRR4302537.5881644/1‑94 (MQ=60)
                           GGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGG                                                                >  SRR4302537.3713438/1‑94 (MQ=60)
                           GGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGC                                                                >  SRR4302537.3631925/1‑94 (MQ=60)
                           GGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGC                                                                >  SRR4302537.3713437/1‑94 (MQ=60)
                            GAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCG                                                               <  SRR4302537.5997744/94‑1 (MQ=60)
                             AGTTATGCCTTCTTTACCATTTCTGTAAGAGGTAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGG                                                              <  SRR4302537.1002910/94‑1 (MQ=60)
                             AGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGG                                                              <  SRR4302537.5020920/94‑1 (MQ=60)
                             AGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGG                                                              >  SRR4302537.6337653/1‑94 (MQ=60)
                              GTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGTGCGGG                                                             >  SRR4302537.1513567/1‑94 (MQ=60)
                              GTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGAGCGGC                                                             >  SRR4302537.5628640/1‑94 (MQ=60)
                               TTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCG                                                            <  SRR4302537.5106423/94‑1 (MQ=60)
                               TTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCG                                                            <  SRR4302537.5252100/94‑1 (MQ=60)
                               TTATGCCTTCTTTACCATTTCGGTAAGAAATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCG                                                            <  SRR4302537.1130307/94‑1 (MQ=60)
                                TATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGGCCT‑‑CGCTTTCCTCACTGTGTTTTGATTTCAGCGCGGCGG                                                           >  SRR4302537.25210/1‑94 (MQ=49)
                                TATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGA                                                           >  SRR4302537.2557820/1‑94 (MQ=60)
                                 ATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCCGCCTTCGTTTTCTTTACTGTGGTTTGATTTAAGCGCGGCGAG                                                          >  SRR4302537.3397856/1‑94 (MQ=37)
                                  TGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATA                                                         >  SRR4302537.4092682/1‑94 (MQ=60)
                                  TGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATA                                                         >  SRR4302537.2536840/1‑94 (MQ=60)
                                    CCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAC                                                       >  SRR4302537.1618595/1‑94 (MQ=60)
                                    CCTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAAC                                                       >  SRR4302537.948962/1‑94 (MQ=60)
                                     CTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGTTTACAGCGCGGCGATAACA                                                      >  SRR4302537.1244475/1‑94 (MQ=60)
                                     CTTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACA                                                      >  SRR4302537.1495183/1‑94 (MQ=60)
                                      TTCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAG                                                     <  SRR4302537.5140838/94‑1 (MQ=60)
                                       TCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGGTTTGATTACAGCGCGGCGATAACAGC                                                    >  SRR4302537.5677086/1‑94 (MQ=60)
                                       TCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCCGCCTTCGGTTTTATCACTGTGGTTTTATTTTAGCGCGGCGATAACAGC                                                    >  SRR4302537.5536711/1‑94 (MQ=29)
                                       TCTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGTGCATGCTCCGGCCCTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGC                                                    >  SRR4302537.206598/1‑94 (MQ=60)
                                        CTTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCCGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCC                                                   >  SRR4302537.6027985/1‑94 (MQ=60)
                                         TTTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCT                                                  <  SRR4302537.491893/94‑1 (MQ=60)
                                          TTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTG                                                 >  SRR4302537.1963256/1‑94 (MQ=60)
                                          TTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTG                                                 <  SRR4302537.2388059/94‑1 (MQ=60)
                                          TTACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTG                                                 <  SRR4302537.2180375/94‑1 (MQ=60)
                                           TACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGC                                                >  SRR4302537.5299656/1‑94 (MQ=60)
                                            ACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCT                                               >  SRR4302537.1915627/1‑94 (MQ=60)
                                            ACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCT                                               >  SRR4302537.3561775/1‑94 (MQ=60)
                                            ACCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCT                                               >  SRR4302537.3325795/1‑94 (MQ=60)
                                            ACCATGTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTGCATCGCTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCT                                               <  SRR4302537.5892216/94‑1 (MQ=60)
                                             CCATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTG                                              <  SRR4302537.1950020/94‑1 (MQ=60)
                                               ATTTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTT                                            <  SRR4302537.1990506/94‑1 (MQ=60)
                                                 TTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCA                                          >  SRR4302537.2222589/1‑94 (MQ=60)
                                                 TTCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCA                                          <  SRR4302537.4079081/94‑1 (MQ=60)
                                                  TCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAA                                         >  SRR4302537.4824525/1‑94 (MQ=60)
                                                  TCTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAA                                         <  SRR4302537.3764113/94‑1 (MQ=60)
                                                   CTGTAAGAGATAAAAAAGGCCGGAGCATGCTTCGGCCTTCGTTTTCATCACTGTGGTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAT                                        >  SRR4302537.6168790/1‑94 (MQ=60)
                                                   CTGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAAT                                        >  SRR4302537.5196575/1‑94 (MQ=60)
                                                    TGTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATC                                       >  SRR4302537.1554298/1‑94 (MQ=60)
                                                     GTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCA                                      >  SRR4302537.2616711/1‑94 (MQ=60)
                                                     GTAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCA                                      <  SRR4302537.86436/94‑1 (MQ=60)
                                                      TAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAG                                     <  SRR4302537.4016299/94‑1 (MQ=60)
                                                      TAAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAG                                     >  SRR4302537.3506103/1‑94 (MQ=60)
                                                       AAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGT                                    >  SRR4302537.3019662/1‑94 (MQ=60)
                                                       AAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGT                                    <  SRR4302537.2189447/94‑1 (MQ=60)
                                                       AAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGT                                    >  SRR4302537.1593702/1‑94 (MQ=60)
                                                       AAGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGT                                    <  SRR4302537.3844689/94‑1 (MQ=60)
                                                        AGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT                                   >  SRR4302537.2717307/1‑94 (MQ=60)
                                                        AGAGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTT                                   <  SRR4302537.3453990/94‑1 (MQ=60)
                                                          AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC                                 <  SRR4302537.5939771/94‑1 (MQ=60)
                                                          AGATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTC                                 <  SRR4302537.929054/94‑1 (MQ=60)
                                                           GATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCG                                <  SRR4302537.5813749/94‑1 (MQ=60)
                                                           GATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCG                                <  SRR4302537.613874/94‑1 (MQ=60)
                                                           GATAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTAATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCG                                >  SRR4302537.3159604/1‑94 (MQ=60)
                                                              TAAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCT                              >  SRR4302537.1857022/1‑94 (MQ=60)
                                                               AAAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTT                             <  SRR4302537.3523523/94‑1 (MQ=60)
                                                                AAAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTT                            <  SRR4302537.1627004/94‑1 (MQ=60)
                                                                AAAAAGCCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTT                            <  SRR4302537.3560566/94‑1 (MQ=60)
                                                                 AAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTC                           <  SRR4302537.3893965/94‑1 (MQ=60)
                                                                 AAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTC                           >  SRR4302537.2160005/1‑94 (MQ=60)
                                                                 AAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTC                           <  SRR4302537.4201183/94‑1 (MQ=60)
                                                                 AAAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTC                           <  SRR4302537.4001498/94‑1 (MQ=60)
                                                                  AAAGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCG                          >  SRR4302537.3936510/1‑94 (MQ=60)
                                                                    AGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT                        >  SRR4302537.4425839/1‑94 (MQ=60)
                                                                    AGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT                        >  SRR4302537.2276033/1‑94 (MQ=60)
                                                                    AGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT                        <  SRR4302537.3906183/94‑1 (MQ=60)
                                                                    AGGCCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT                        >  SRR4302537.322459/1‑94 (MQ=60)
                                                                    AGGCCGGAGCATCCCCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCT                        <  SRR4302537.4435403/94‑1 (MQ=60)
                                                                       CCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCC                     >  SRR4302537.2806353/1‑94 (MQ=60)
                                                                       CCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCC                     <  SRR4302537.1007160/94‑1 (MQ=60)
                                                                       CCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCC                     <  SRR4302537.6084509/94‑1 (MQ=60)
                                                                       CCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCC                     >  SRR4302537.2621876/1‑94 (MQ=60)
                                                                       CCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCC                     >  SRR4302537.2926841/1‑94 (MQ=60)
                                                                       CCGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCC                     <  SRR4302537.3151873/94‑1 (MQ=60)
                                                                        CGGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCG                    >  SRR4302537.2936196/1‑94 (MQ=60)
                                                                        CGGAGCAGGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCG                    <  SRR4302537.1403720/94‑1 (MQ=60)
                                                                         GGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGC                   >  SRR4302537.1645951/1‑94 (MQ=60)
                                                                         GGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGC                   >  SRR4302537.908/1‑94 (MQ=60)
                                                                         GGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGC                   >  SRR4302537.2010090/1‑94 (MQ=60)
                                                                         GGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGC                   >  SRR4302537.6131994/1‑94 (MQ=60)
                                                                         GGAGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGC                   >  SRR4302537.2561557/1‑94 (MQ=60)
                                                                            AGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCAT                 >  SRR4302537.635173/1‑94 (MQ=60)
                                                                            AGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCAT                 >  SRR4302537.397094/1‑94 (MQ=60)
                                                                            AGCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCAT                 <  SRR4302537.4295203/94‑1 (MQ=60)
                                                                             GCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATA                <  SRR4302537.1897335/94‑1 (MQ=60)
                                                                             GCATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATA                <  SRR4302537.4399792/94‑1 (MQ=60)
                                                                              CATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAG               <  SRR4302537.3796630/94‑1 (MQ=60)
                                                                              CATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAG               >  SRR4302537.2914033/1‑94 (MQ=60)
                                                                              CATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAG               <  SRR4302537.2818716/94‑1 (MQ=60)
                                                                               CTGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGC              <  SRR4302537.2531744/94‑1 (MQ=60)
                                                                               ATGCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGC              <  SRR4302537.6030319/94‑1 (MQ=60)
                                                                                 GCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCT            <  SRR4302537.1302928/94‑1 (MQ=60)
                                                                                 GCTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCT            <  SRR4302537.1952850/94‑1 (MQ=60)
                                                                                  CTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTT           <  SRR4302537.1329744/94‑1 (MQ=60)
                                                                                  CTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTT           <  SRR4302537.3105675/94‑1 (MQ=60)
                                                                                  CTCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTT           >  SRR4302537.5617050/1‑94 (MQ=60)
                                                                                   TCCGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTC          >  SRR4302537.875369/1‑94 (MQ=60)
                                                                                    CCTGCCTTGGTTTTCGTCATTGTGGTTGGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCC         <  SRR4302537.5972233/94‑1 (MQ=60)
                                                                                     CGGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCA        >  SRR4302537.4818664/1‑94 (MQ=60)
                                                                                       GGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAG       <  SRR4302537.2278863/94‑1 (MQ=60)
                                                                                       GGCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAG       <  SRR4302537.2257147/94‑1 (MQ=60)
                                                                                        GCCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGC      >  SRR4302537.2975707/1‑94 (MQ=60)
                                                                                         CCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCT     <  SRR4302537.6233453/94‑1 (MQ=60)
                                                                                         CCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCT     >  SRR4302537.830904/1‑94 (MQ=60)
                                                                                         CCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCT     >  SRR4302537.743395/1‑94 (MQ=60)
                                                                                         CCTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCT     >  SRR4302537.2865863/1‑94 (MQ=60)
                                                                                          CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    <  SRR4302537.1358043/94‑1 (MQ=60)
                                                                                          CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    >  SRR4302537.4670281/1‑94 (MQ=60)
                                                                                          CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    >  SRR4302537.6296574/1‑94 (MQ=60)
                                                                                          CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    <  SRR4302537.5187712/94‑1 (MQ=60)
                                                                                          CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    <  SRR4302537.5826667/94‑1 (MQ=60)
                                                                                          CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    >  SRR4302537.5359842/1‑94 (MQ=60)
                                                                                          CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    <  SRR4302537.3821022/94‑1 (MQ=60)
                                                                                          CTTCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTT    <  SRR4302537.3303067/94‑1 (MQ=60)
                                                                                             TCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCT  >  SRR4302537.4293517/1‑94 (MQ=60)
                                                                                             |                                                                                             
AAAGGCTTCTTAGCCAGTATTTCACGGGGAGTTATGCCTTCTTTACCATTTCTGTAAGAGATAAAAAAAGGCCGGATGCATGCTCCGGCCTTGCGTTTTCATCACTGTGTTTTGATTACAGCGCGGCGATAACAGCCTGCTGTTCAATCAGTTTCGCTTTCGCTTCCGCATAGCCTTCCAGCTTCT  >  NC_000913/4478435‑4478620

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: