Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,896,819	+C	coding (622/657 nt)	ygcU ←	putative oxidoreductase subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,896,818	1	.	C	99.6%	945.6 / ‑4.5	279	coding (623/657 nt)	ygcU	putative oxidoreductase subunit
Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (160/118); total (161/118)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 301 total aligned reads displayed.

CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑G‑CGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTT  >  NC_000913/2896727‑2896905

ccAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑G‑c                                                                                        >  2:303125/1‑93 (MQ=255)

ccAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑G‑c                                                                                        <  1:449995/93‑1 (MQ=255)

ccAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑G‑c                                                                                        >  2:6902594/1‑93 (MQ=255)

 cAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑G‑cc                                                                                       >  1:5811824/1‑92 (MQ=255)

   ggATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑G‑ccga                                                                                     <  2:4309324/93‑4 (MQ=255)

    gATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑G‑ccgat                                                                                    >  1:6573645/1‑89 (MQ=255)

    gATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑G‑ccgat                                                                                    >  2:4916890/1‑89 (MQ=255)

    gATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑G‑ccgat                                                                                    <  1:838917/93‑5 (MQ=255)

      tataGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCgatga                                                                                   >  1:7346168/1‑93 (MQ=255)

      tataGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCgatga                                                                                   <  1:5219561/93‑1 (MQ=255)

      tataGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCgatga                                                                                   <  1:2670357/93‑1 (MQ=255)

        taGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCgatgatg                                                                                 >  2:6483648/1‑93 (MQ=255)

         aGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCgatgatga                                                                                <  1:4966247/93‑1 (MQ=255)

         aGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCgatgatga                                                                                <  1:2110575/93‑1 (MQ=255)

         aGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCgatgatga                                                                                >  1:1823249/1‑93 (MQ=255)

            cGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGAtgt                                                                             >  2:5946477/1‑93 (MQ=255)

            cGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGAtgt                                                                             <  1:4780900/93‑1 (MQ=255)

            cGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGAtgt                                                                             >  1:3464194/1‑93 (MQ=255)

              tAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGa                                                                           <  1:5711127/93‑1 (MQ=255)

              tAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGa                                                                           <  1:1366022/93‑1 (MQ=255)

                gaagaGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACg                                                                         >  2:5076177/1‑93 (MQ=255)

                gaagaGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACg                                                                         >  1:6707689/1‑93 (MQ=255)

                   gagGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAAt                                                                      >  2:1388565/1‑93 (MQ=255)

                   gagGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAAt                                                                      >  2:6941463/1‑93 (MQ=255)

                      gttgttTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTc                                                                   <  2:5385172/93‑1 (MQ=255)

                       ttgttTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTcc                                                                  >  2:4157356/1‑93 (MQ=255)

                         gttTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCgg                                                                <  1:2273725/93‑1 (MQ=255)

                         gttTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCgg                                                                >  1:5887035/1‑93 (MQ=255)

                         gttTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCgg                                                                <  2:6022065/93‑1 (MQ=255)

                          ttttCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCggg                                                               >  1:5049005/1‑93 (MQ=255)

                               cGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGc                                                          <  1:1147975/93‑1 (MQ=255)

                               cGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGc                                                          >  1:4262885/1‑93 (MQ=255)

                               cGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGc                                                          >  2:568933/1‑93 (MQ=255)

                                ggggTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGcc                                                         >  1:870491/1‑93 (MQ=255)

                                ggggTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGcc                                                         <  1:788628/93‑1 (MQ=255)

                                 gggTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCcg                                                        >  2:7223752/1‑93 (MQ=255)

                                 gggTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCcg                                                        <  1:1501942/93‑1 (MQ=255)

                                   gTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCcgcg                                                      <  1:2972720/93‑1 (MQ=255)

                                   gTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCcgcg                                                      >  2:6139199/1‑93 (MQ=255)

                                     gAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCcgcgcg                                                    >  1:7134613/1‑93 (MQ=255)

                                       aTTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCgcggc                                                  <  2:3518864/93‑1 (MQ=255)

                                       aTTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCgcggc                                                  <  2:5228204/93‑1 (MQ=255)

                                         ttAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGt                                                <  2:2345255/93‑1 (MQ=255)

                                         ttAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGt                                                <  2:512197/93‑1 (MQ=255)

                                         ttAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGt                                                <  2:1507529/93‑1 (MQ=255)

                                         ttAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGt                                                >  1:1314784/1‑93 (MQ=255)

                                         ttAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGt                                                <  1:3276094/93‑1 (MQ=255)

                                         ttAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGt                                                <  1:2574994/93‑1 (MQ=255)

                                           aaaGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTgg                                              >  1:4011128/1‑93 (MQ=255)

                                           aaaGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTgg                                              <  1:1746728/93‑1 (MQ=255)

                                           aaaGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTgg                                              >  2:6642923/1‑93 (MQ=255)

                                            aaGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGc                                             >  2:4571569/1‑93 (MQ=255)

                                            aaGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGc                                             <  2:2037767/93‑1 (MQ=255)

                                              gATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCAc                                           >  2:4132189/1‑93 (MQ=255)

                                              gATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCAc                                           >  1:6002813/1‑93 (MQ=255)

                                              gATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCAc                                           <  2:6351284/93‑1 (MQ=255)

                                                ttttCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGt                                         >  2:744776/1‑93 (MQ=255)

                                                     aCTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTAC‑CGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTa                                    >  2:5816835/1‑93 (MQ=255)

                                                      cTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTaa                                   <  2:5592576/93‑1 (MQ=255)

                                                      cTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTaa                                   >  2:7102373/1‑93 (MQ=255)

                                                       tGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAt                                  >  1:5499595/1‑93 (MQ=255)

                                                       tGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAt                                  >  2:2818699/1‑93 (MQ=255)

                                                       tGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAt                                  >  1:3667767/1‑93 (MQ=255)

                                                       tGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAt                                  >  1:5086039/1‑93 (MQ=255)

                                                        gTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATg                                 >  2:6836560/1‑93 (MQ=255)

                                                            cTTCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCgtg                             <  1:1906025/93‑1 (MQ=255)

                                                             ttCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCgtgt                            >  1:7094160/1‑93 (MQ=255)

                                                             ttCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCgtgt                            <  2:438309/93‑1 (MQ=255)

                                                             ttCAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCgtgt                            >  2:3601467/1‑93 (MQ=255)

                                                               cAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGa                          >  1:4414717/1‑93 (MQ=255)

                                                               cAGTGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGa                          <  2:7330098/93‑1 (MQ=255)

                                                                  tGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACgg                       <  2:2838199/93‑1 (MQ=255)

                                                                  tGATATAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACgg                       <  2:7295833/93‑1 (MQ=255)

                                                                    atatAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTg                     >  2:3296201/1‑93 (MQ=255)

                                                                    atatAGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTg                     <  2:465792/93‑1 (MQ=255)

                                                                     tataGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGc                    >  1:4636247/1‑93 (MQ=255)

                                                                        aGCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCAt                 <  2:7157918/93‑1 (MQ=255)

                                                                         gCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATc                >  2:379038/1‑93 (MQ=255)

                                                                         gCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATc                <  1:2881053/93‑1 (MQ=255)

                                                                         gCACAATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATc                >  1:6412536/1‑93 (MQ=255)

                                                                           acaATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAg              <  1:3099844/93‑1 (MQ=255)

                                                                           acaATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAg              <  1:6358403/93‑1 (MQ=255)

                                                                           acaATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAg              >  1:6138423/1‑93 (MQ=255)

                                                                           acaATGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAg              >  2:6757376/1‑93 (MQ=255)

                                                                             aaTGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGcc            >  1:2780304/1‑93 (MQ=255)

                                                                             aaTGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGcc            <  2:1345040/93‑1 (MQ=255)

                                                                              aTGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCa           >  2:2515506/1‑93 (MQ=255)

                                                                              aTGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCa           >  2:1037299/1‑93 (MQ=255)

                                                                               tGCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCaa          <  2:3683985/93‑1 (MQ=255)

                                                                                gCACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAAt         >  2:119676/1‑93 (MQ=255)

                                                                                 cACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATa        <  1:6924547/93‑1 (MQ=255)

                                                                                 cACCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATa        >  2:4064968/1‑93 (MQ=255)

                                                                                  cctttCGTT‑GCCGATGATGATGTGAGAAATGCCGGGCCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAc       <  1:5151855/90‑1 (MQ=255)

                                                                                  aCCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAc       >  1:2309843/1‑93 (MQ=255)

                                                                                  aCCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAc       <  2:176039/93‑1 (MQ=255)

                                                                                  aCCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAc       <  1:6827605/93‑1 (MQ=255)

                                                                                  aCCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAc       <  1:1627704/93‑1 (MQ=255)

                                                                                  aCCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAc       <  1:3801403/93‑1 (MQ=255)

                                                                                  aCCTTCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAc       >  2:3100337/1‑93 (MQ=255)

                                                                                     ttCGTT‑GCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGc    <  1:3550872/93‑1 (MQ=255)

CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTT‑G‑CGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTT  >  NC_000913/2896727‑2896905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑CGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACC  >  NC_000913/2896727‑2896912

CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑CC                                                                                              >  SRR4302542.3861917/1‑94 (MQ=60)

CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑CC                                                                                              <  SRR4302542.453884/94‑1 (MQ=60)

CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑CC                                                                                              <  SRR4302542.2580429/94‑1 (MQ=60)

CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑CC                                                                                              >  SRR4302542.873495/1‑94 (MQ=60)

CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑CC                                                                                              >  SRR4302542.5868217/1‑94 (MQ=60)

   GGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGAT                                                                                            >  SRR4302542.6638415/1‑94 (MQ=60)

   GGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGAT                                                                                            <  SRR4302542.4492600/94‑1 (MQ=60)

   GGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGAT                                                                                            >  SRR4302542.4842243/1‑94 (MQ=60)

    GATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATG                                                                                           <  SRR4302542.1285330/94‑1 (MQ=60)

    GATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATG                                                                                           >  SRR4302542.3379389/1‑94 (MQ=60)

    GATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATG                                                                                           <  SRR4302542.3051163/94‑1 (MQ=60)

    GATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATG                                                                                           <  SRR4302542.846170/94‑1 (MQ=60)

     ATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGA                                                                                          >  SRR4302542.659792/1‑94 (MQ=60)

     ATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGA                                                                                          >  SRR4302542.7418116/1‑94 (MQ=60)

      TATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGAT                                                                                         <  SRR4302542.2696125/94‑1 (MQ=60)

      TATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGAT                                                                                         <  SRR4302542.5270320/94‑1 (MQ=60)

       ATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATG                                                                                        <  SRR4302542.1626749/94‑1 (MQ=60)

       ATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATG                                                                                        <  SRR4302542.7059606/94‑1 (MQ=60)

       ATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATG                                                                                        <  SRR4302542.4131168/94‑1 (MQ=60)

        TAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGA                                                                                       >  SRR4302542.1839039/1‑94 (MQ=60)

         AGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGAT                                                                                      <  SRR4302542.5014469/94‑1 (MQ=60)

         AGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGAT                                                                                      <  SRR4302542.2128790/94‑1 (MQ=60)

           CCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGT                                                                                    >  SRR4302542.3496639/1‑94 (MQ=60)

           CCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGT                                                                                    >  SRR4302542.2218317/1‑94 (MQ=60)

            CGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTG                                                                                   <  SRR4302542.4382679/94‑1 (MQ=60)

            CGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTG                                                                                   >  SRR4302542.3542389/1‑94 (MQ=60)

            CGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTG                                                                                   <  SRR4302542.4827500/94‑1 (MQ=60)

            CGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTG                                                                                   >  SRR4302542.625140/1‑94 (MQ=60)

             GTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGA                                                                                  >  SRR4302542.5541623/1‑94 (MQ=60)

             GTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGA                                                                                  >  SRR4302542.5797302/1‑94 (MQ=60)

              TAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGAC                                                                                 <  SRR4302542.5766563/94‑1 (MQ=60)

              TAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGAC                                                                                 <  SRR4302542.1377826/94‑1 (MQ=60)

               AGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACG                                                                                <  SRR4302542.4798850/94‑1 (MQ=60)

               AGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACG                                                                                >  SRR4302542.6773766/1‑94 (MQ=60)

               AGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACG                                                                                >  SRR4302542.4669413/1‑94 (MQ=60)

                  AGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAAT                                                                             >  SRR4302542.2596911/1‑94 (MQ=60)

                  AGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAAT                                                                             <  SRR4302542.7580393/94‑1 (MQ=60)

                   GAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATG                                                                            <  SRR4302542.272951/94‑1 (MQ=60)

                    AGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGT                                                                           >  SRR4302542.870731/1‑94 (MQ=60)

                     GGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCTCCTTCGTTGCCGATGATGATGTGACGAATGTC                                                                          <  SRR4302542.3628527/94‑1 (MQ=60)

                     GGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTC                                                                          >  SRR4302542.2921372/1‑94 (MQ=60)

                     GGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTC                                                                          >  SRR4302542.3494785/1‑94 (MQ=60)

                      GTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCC                                                                         <  SRR4302542.677763/94‑1 (MQ=60)

                        TGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGG                                                                       <  SRR4302542.5811955/94‑1 (MQ=60)

                        TGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGG                                                                       >  SRR4302542.5944091/1‑94 (MQ=60)

                         GTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGG                                                                      <  SRR4302542.3947796/94‑1 (MQ=60)

                         GTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGG                                                                      >  SRR4302542.5098019/1‑94 (MQ=60)

                         GTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGG                                                                      <  SRR4302542.2293269/94‑1 (MQ=60)

                          TTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGC                                                                     <  SRR4302542.2755055/94‑1 (MQ=60)

                              CCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGC                                                                 >  SRR4302542.4304850/1‑94 (MQ=60)

                               CGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCC                                                                <  SRR4302542.1157808/94‑1 (MQ=60)

                               CGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCC                                                                <  SRR4302542.5121449/94‑1 (MQ=60)

                               CGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCC                                                                >  SRR4302542.877995/1‑94 (MQ=60)

                               CGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCC                                                                >  SRR4302542.4639646/1‑94 (MQ=60)

                                GGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCG                                                               >  SRR4302542.290319/1‑94 (MQ=60)

                                GGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCG                                                               <  SRR4302542.795422/94‑1 (MQ=60)

                                 GGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGC                                                              <  SRR4302542.1514933/94‑1 (MQ=60)

                                   GTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGC                                                            <  SRR4302542.3001191/94‑1 (MQ=60)

                                   GTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGC                                                            >  SRR4302542.803753/1‑94 (MQ=60)

                                    TGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCG                                                           >  SRR4302542.7204630/1‑94 (MQ=60)

                                     GAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGG                                                          <  SRR4302542.6443384/94‑1 (MQ=60)

                                      AATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGC                                                         >  SRR4302542.441486/1‑94 (MQ=60)

                                      AATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGC                                                         >  SRR4302542.7051161/1‑94 (MQ=60)

                                       ATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCG                                                        >  SRR4302542.1807296/1‑94 (MQ=60)

                                        TTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGT                                                       >  SRR4302542.1326115/1‑94 (MQ=60)

                                         TTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      <  SRR4302542.3307011/94‑1 (MQ=60)

                                         TTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTG                                                      <  SRR4302542.2599962/94‑1 (MQ=60)

                                          TAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGG                                                     >  SRR4302542.4050714/1‑94 (MQ=60)

                                          TAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGG                                                     >  SRR4302542.7359075/1‑94 (MQ=60)

                                           AAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGC                                                    <  SRR4302542.1761884/94‑1 (MQ=60)

                                           AAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGC                                                    <  SRR4302542.1352815/94‑1 (MQ=60)

                                            AAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCA                                                   >  SRR4302542.4965214/1‑94 (MQ=60)

                                             AGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCAC                                                  >  SRR4302542.6060950/1‑94 (MQ=60)

                                             AGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCCCGCGGCGTGGCAC                                                  >  SRR4302542.6269670/1‑94 (MQ=60)

                                               ATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGT                                                >  SRR4302542.3450041/1‑94 (MQ=60)

                                               ATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGT                                                >  SRR4302542.1165763/1‑94 (MQ=60)

                                                TTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTT                                               >  SRR4302542.1457877/1‑94 (MQ=60)

                                                TTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTT                                               >  SRR4302542.4696956/1‑94 (MQ=60)

                                                 TTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTT                                              <  SRR4302542.5665989/94‑1 (MQ=60)

                                                   TCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTT                                            <  SRR4302542.2935747/94‑1 (MQ=60)

                                                    CACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCCGCCGCGCGGCGCGGCACGCTTTTA                                           >  SRR4302542.7532817/1‑94 (MQ=60)

                                                     ACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAA                                          <  SRR4302542.2103005/94‑1 (MQ=60)

                                                      CTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAT                                         >  SRR4302542.5135468/1‑94 (MQ=60)

                                                      CTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAT                                         >  SRR4302542.3702795/1‑94 (MQ=60)

                                                      CTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAAT                                         >  SRR4302542.5553014/1‑94 (MQ=60)

                                                       TGTTACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATG                                        >  SRR4302542.5995975/1‑94 (MQ=60)

                                                          TACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGT                                     >  SRR4302542.977672/1‑94 (MQ=60)

                                                          TACTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGT                                     >  SRR4302542.3162554/1‑94 (MQ=60)

                                                            CTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGT                                   >  SRR4302542.7163757/1‑94 (MQ=60)

                                                            CTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGT                                   <  SRR4302542.1922498/94‑1 (MQ=60)

                                                            CTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGT                                   >  SRR4302542.5911386/1‑94 (MQ=60)

                                                            CTTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGT                                   <  SRR4302542.1700242/94‑1 (MQ=60)

                                                             TTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTG                                  <  SRR4302542.6746220/94‑1 (MQ=60)

                                                             TTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTG                                  >  SRR4302542.3607957/1‑94 (MQ=60)

                                                             TTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTG                                  >  SRR4302542.698402/1‑94 (MQ=60)

                                                             TTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTG                                  >  SRR4302542.3713775/1‑94 (MQ=60)

                                                             TTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTG                                  <  SRR4302542.6579017/94‑1 (MQ=60)

                                                             TTCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTG                                  <  SRR4302542.5014569/94‑1 (MQ=60)

                                                              TCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGA                                 >  SRR4302542.1786306/1‑94 (MQ=60)

                                                              TCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGA                                 >  SRR4302542.2301698/1‑94 (MQ=60)

                                                              TCAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGA                                 >  SRR4302542.4458070/1‑94 (MQ=60)

                                                               CAGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGAC                                >  SRR4302542.1883591/1‑94 (MQ=60)

                                                                AGTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACG                               <  SRR4302542.6452298/94‑1 (MQ=60)

                                                                 GTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGG                              >  SRR4302542.1623562/1‑94 (MQ=60)

                                                                 GTGATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGG                              >  SRR4302542.2694189/1‑94 (MQ=60)

                                                                   GATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTG                            <  SRR4302542.4118400/94‑1 (MQ=60)

                                                                   GATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTG                            >  SRR4302542.226080/1‑94 (MQ=60)

                                                                    ATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGC                           <  SRR4302542.6639365/94‑1 (MQ=60)

                                                                    ATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGC                           >  SRR4302542.4681548/1‑94 (MQ=60)

                                                                    ATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGC                           >  SRR4302542.140487/1‑94 (MQ=60)

                                                                    ATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGC                           >  SRR4302542.824641/1‑94 (MQ=60)

                                                                    ATATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGC                           >  SRR4302542.5156793/1‑94 (MQ=60)

                                                                     TATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCC                          >  SRR4302542.1710435/1‑94 (MQ=60)

                                                                     TATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCC                          >  SRR4302542.5161855/1‑94 (MQ=60)

                                                                      ATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCA                         <  SRR4302542.7174982/94‑1 (MQ=60)

                                                                      ATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCA                         >  SRR4302542.6080998/1‑94 (MQ=60)

                                                                      ATAGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCA                         >  SRR4302542.2865608/1‑94 (MQ=60)

                                                                        AGCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATC                       >  SRR4302542.6475724/1‑94 (MQ=60)

                                                                         GCACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCA                      <  SRR4302542.2908723/94‑1 (MQ=60)

                                                                          CACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAG                     >  SRR4302542.3043561/1‑94 (MQ=60)

                                                                          CACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAG                     <  SRR4302542.5231014/94‑1 (MQ=60)

                                                                          CACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAG                     >  SRR4302542.5264745/1‑94 (MQ=60)

                                                                          CACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAG                     >  SRR4302542.6197813/1‑94 (MQ=60)

                                                                          CACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAG                     <  SRR4302542.3271789/94‑1 (MQ=60)

                                                                           ACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGC                    <  SRR4302542.6421023/94‑1 (MQ=60)

                                                                           ACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGC                    >  SRR4302542.7263251/1‑94 (MQ=60)

                                                                           ACAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGC                    <  SRR4302542.3129301/94‑1 (MQ=60)

                                                                            CAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCC                   >  SRR4302542.1906143/1‑94 (MQ=60)

                                                                            CAATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCC                   >  SRR4302542.2807077/1‑94 (MQ=60)

                                                                             AATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCA                  >  SRR4302542.449789/1‑94 (MQ=60)

                                                                              ATGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAA                 >  SRR4302542.5493303/1‑94 (MQ=60)

                                                                               TGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGCCGGTGCCATCAGCCAAT                >  SRR4302542.3565192/1‑94 (MQ=60)

                                                                               TGCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAAT                <  SRR4302542.5037090/94‑1 (MQ=60)

                                                                                GCACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATA               >  SRR4302542.6908305/1‑94 (MQ=60)

                                                                                 CACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAC              >  SRR4302542.7204312/1‑94 (MQ=60)

                                                                                 CACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAC              >  SRR4302542.2329673/1‑94 (MQ=60)

                                                                                 CACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAC              <  SRR4302542.232947/94‑1 (MQ=60)

                                                                                 CACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAC              <  SRR4302542.5121009/94‑1 (MQ=60)

                                                                                 CACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATAC              <  SRR4302542.6992531/94‑1 (MQ=60)

                                                                                  cctttcgttgcCGATGATGATGTGAGAAATGCCGGGCCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACT             <  SRR4302542.5201930/83‑1 (MQ=60)

                                                                                  ACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACT             <  SRR4302542.6894713/94‑1 (MQ=60)

                                                                                  ACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACT             <  SRR4302542.3839030/94‑1 (MQ=60)

                                                                                  ACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACT             <  SRR4302542.1641752/94‑1 (MQ=60)

                                                                                  ACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACT             >  SRR4302542.2093552/1‑94 (MQ=60)

                                                                                  ACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACT             <  SRR4302542.6007920/94‑1 (MQ=60)

                                                                                  ACCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACT             >  SRR4302542.6074162/1‑94 (MQ=60)

                                                                                   CCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTG            >  SRR4302542.3732506/1‑94 (MQ=60)

                                                                                   CCTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTG            >  SRR4302542.2604635/1‑94 (MQ=60)

                                                                                    CTTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGC           >  SRR4302542.6786315/1‑94 (MQ=60)

                                                                                     TTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCT          <  SRR4302542.3584066/94‑1 (MQ=60)

                                                                                     TTCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCT          <  SRR4302542.5882103/94‑1 (MQ=60)

                                                                                      TCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTT         >  SRR4302542.1339633/1‑94 (MQ=60)

                                                                                      TCGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTT         >  SRR4302542.563994/1‑94 (MQ=60)

                                                                                       CGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTC        >  SRR4302542.2211533/1‑94 (MQ=60)

                                                                                       CGTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTC        >  SRR4302542.5997064/1‑94 (MQ=60)

                                                                                        GTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCC       >  SRR4302542.7561771/1‑94 (MQ=60)

                                                                                        GTTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCC       <  SRR4302542.3701262/94‑1 (MQ=60)

                                                                                         TTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCA      >  SRR4302542.1935351/1‑94 (MQ=60)

                                                                                         TTGCCGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCA      <  SRR4302542.4716651/94‑1 (MQ=60)

                                                                                           C‑CGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGAC   >  SRR4302542.4625143/1‑94 (MQ=60)

                                                                                             CGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACC  >  SRR4302542.5224510/1‑94 (MQ=60)

                                                                                             CGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACC  >  SRR4302542.1624394/1‑94 (MQ=60)

CCAGGATATAGCCGTAGAAGAGGTTGTTTTCCGGGGTGAATTTAAAGATTTTCACTGTTACTTCAGTGATATAGCACAATGCACCTTCGTTG‑CGATGATGATGTGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACC  >  NC_000913/2896727‑2896912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`