Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,980,709 A→G M191T (ATG→ACG)  kduD ← 2‑deoxy‑D‑gluconate 3‑dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,980,7090AG85.5% 668.5 / 102.5 283M191T (ATG→ACG) kduD2‑deoxy‑D‑gluconate 3‑dehydrogenase
Reads supporting (aligned to +/- strand):  ref base A (20/21);  new base G (120/122);  total (140/143)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.09e-03

Only 100 of 285 total aligned reads displayed.

GGCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTTGA  >  NC_000913/2980619‑2980800
                                                                                          |                                                                                           
 gCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCgtgt                                                                                          >  2:7128832/1‑93 (MQ=255)
 gCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGt                                                                                          <  2:6191771/93‑1 (MQ=255)
  cAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTa                                                                                         >  1:601661/1‑93 (MQ=255)
    gTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAAc                                                                                       >  1:2976037/1‑93 (MQ=255)
     tCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAAcc                                                                                      <  1:5378848/93‑1 (MQ=255)
      ccccAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAAccc                                                                                     <  1:866400/93‑1 (MQ=255)
       cccAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCg                                                                                    <  2:3774531/93‑1 (MQ=255)
       cccAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCg                                                                                    <  1:7528770/93‑1 (MQ=255)
         cAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCggg                                                                                  >  2:1292146/1‑93 (MQ=255)
         cAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCggg                                                                                  >  1:6931664/1‑93 (MQ=255)
         cAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCggg                                                                                  <  1:5808500/93‑1 (MQ=255)
         cAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCggg                                                                                  <  2:1170911/93‑1 (MQ=255)
         cAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCggg                                                                                  <  2:2458844/93‑1 (MQ=255)
         cAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCggg                                                                                  <  2:4713142/93‑1 (MQ=255)
          aaCGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCgggg                                                                                 >  1:7071447/1‑93 (MQ=255)
          aaCGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCgggg                                                                                 <  2:688273/93‑1 (MQ=255)
           aCGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGc                                                                                >  1:1014795/1‑93 (MQ=255)
           aCGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGc                                                                                >  1:4515612/1‑93 (MQ=255)
             gACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTa                                                                              >  1:4688756/1‑93 (MQ=255)
              aCCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTAt                                                                             <  2:2483107/93‑1 (MQ=255)
               ccAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATc                                                                            <  1:982415/93‑1 (MQ=255)
               ccAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATc                                                                            <  2:77879/93‑1 (MQ=255)
               ccAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATc                                                                            >  1:1686931/1‑93 (MQ=255)
               ccAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATc                                                                            >  2:4348524/1‑93 (MQ=255)
                 aGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGc                                                                          >  1:1273666/1‑93 (MQ=255)
                 aGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGc                                                                          <  2:541679/93‑1 (MQ=255)
                 aGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGc                                                                          >  1:7363910/1‑93 (MQ=255)
                   cTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcat                                                                        <  2:2754791/93‑1 (MQ=255)
                   cTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcat                                                                        >  2:3906000/1‑93 (MQ=255)
                    tGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcatt                                                                       >  2:4494697/1‑93 (MQ=255)
                    tGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcatt                                                                       <  2:2886953/93‑1 (MQ=255)
                    tGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcatt                                                                       >  2:3585713/1‑93 (MQ=255)
                    tGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcann                                                                       >  2:1395654/1‑91 (MQ=255)
                     ggAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcatta                                                                      >  1:4104688/1‑93 (MQ=255)
                      gAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcattaa                                                                     >  2:1827663/1‑93 (MQ=255)
                       aaTGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcattaac                                                                    <  1:2454613/93‑1 (MQ=255)
                       aaTGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcattaac                                                                    <  1:3192827/93‑1 (MQ=255)
                       aaTGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGcattaac                                                                    <  1:1904757/93‑1 (MQ=255)
                         tGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcattaacat                                                                  <  2:3668842/93‑1 (MQ=255)
                          gCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcattaacatt                                                                 <  1:5003052/93‑1 (MQ=255)
                           cGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGcattaacatta                                                                >  2:43376/1‑93 (MQ=255)
                               cGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAAtgt                                                            >  2:3351568/1‑93 (MQ=255)
                               cGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAAtgt                                                            <  2:1759319/93‑1 (MQ=255)
                                gagaATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAAtgtt                                                           <  2:3199733/93‑1 (MQ=255)
                                gagaATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAAtgtt                                                           >  1:7023136/1‑93 (MQ=255)
                                  gaATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAAtgttgt                                                         <  1:2273269/93‑1 (MQ=255)
                                  gaATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAAtgttgt                                                         <  1:1088919/93‑1 (MQ=255)
                                    aTTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTgtgt                                                       <  2:6552647/93‑1 (MQ=255)
                                     tttCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGtt                                                      <  1:6807952/93‑1 (MQ=255)
                                     tttCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGtt                                                      <  2:6712880/93‑1 (MQ=255)
                                     tttCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGtt                                                      <  1:6339532/93‑1 (MQ=255)
                                       tCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTa                                                    >  1:5091405/1‑93 (MQ=255)
                                       tCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTa                                                    <  2:4591859/93‑1 (MQ=255)
                                           cgcTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGccc                                                >  1:2809551/1‑93 (MQ=255)
                                            gcTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCa                                               >  1:5248336/1‑93 (MQ=255)
                                            gcTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCa                                               >  2:21537/1‑93 (MQ=255)
                                             cTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCAt                                              >  1:3875411/1‑93 (MQ=255)
                                               aCGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCAttc                                            >  1:2163644/1‑93 (MQ=255)
                                               aCGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTAGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTTTTTTTAAGCCAttc                                            >  1:6175786/1‑93 (MQ=255)
                                                cGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCAttcg                                           >  2:2716693/1‑93 (MQ=255)
                                                 gttgttCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCAttcgt                                          <  2:5707191/93‑1 (MQ=255)
                                                  ttgttCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCAttcgtt                                         <  1:4276531/93‑1 (MQ=255)
                                                  ttgttCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCAttcgtt                                         <  2:48692/93‑1 (MQ=255)
                                                   tgttCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCAttcgttc                                        >  1:4461200/1‑93 (MQ=255)
                                                    gttCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCAttcgttcg                                       >  1:379881/1‑93 (MQ=255)
                                                        aTCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCAt                                   >  1:2241231/1‑93 (MQ=255)
                                                          cTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCa                                 >  1:2065573/1‑93 (MQ=255)
                                                           tGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCTTTCTTTGCCCTTCaa                                >  1:1462936/1‑93 (MQ=255)
                                                             cccGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATc                              <  1:6624203/93‑1 (MQ=255)
                                                             cccGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATc                              <  1:3432669/93‑1 (MQ=255)
                                                             cccGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATc                              <  2:723564/93‑1 (MQ=255)
                                                              ccGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATcg                             >  1:7411128/1‑93 (MQ=255)
                                                               cGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATcgc                            <  2:4046336/93‑1 (MQ=255)
                                                               cGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATcgc                            <  1:1985092/93‑1 (MQ=255)
                                                               cGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATcgc                            <  1:4027375/93‑1 (MQ=255)
                                                                gTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTATCATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATcgcg                           <  2:5956405/93‑1 (MQ=255)
                                                                gTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATcgcg                           >  1:4881627/1‑93 (MQ=255)
                                                                gTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATcgcg                           >  2:3822567/1‑93 (MQ=255)
                                                                gTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATcgcg                           >  2:5195184/1‑93 (MQ=255)
                                                                 tAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGt                          <  1:3025819/93‑1 (MQ=255)
                                                                   gttgttGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTca                        <  1:1146797/93‑1 (MQ=255)
                                                                    ttgttgAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTcac                       <  1:5857968/93‑1 (MQ=255)
                                                                    ttgttgAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTcac                       >  1:5156778/1‑93 (MQ=255)
                                                                    ttgttgAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTcac                       >  1:5971981/1‑93 (MQ=255)
                                                                      gttgAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCacac                     >  1:6374980/1‑93 (MQ=255)
                                                                       ttgAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACAcc                    <  1:1849569/93‑1 (MQ=255)
                                                                       ttgAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACAcc                    >  1:4351971/1‑93 (MQ=255)
                                                                         gAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCa                  <  1:54558/93‑1 (MQ=255)
                                                                           gTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATc                <  2:232894/93‑1 (MQ=255)
                                                                           gTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATc                >  2:6169464/1‑93 (MQ=255)
                                                                            tATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCa               <  1:3582647/93‑1 (MQ=255)
                                                                               tgttgGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCAcgc            <  2:5482077/93‑1 (MQ=255)
                                                                               tgttgGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCAcgc            <  2:4225411/93‑1 (MQ=255)
                                                                               tgttgGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCAcgc            >  2:7106095/1‑93 (MQ=255)
                                                                                gttgGTCACCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCAcgcc           <  1:5917465/93‑1 (MQ=255)
                                                                                   ggTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCt        >  1:7384020/1‑93 (MQ=255)
                                                                                    gTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCtt       >  1:2506668/1‑93 (MQ=255)
                                                                                      cGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCtttt     <  2:5018679/93‑1 (MQ=255)
                                                                                       gCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCttttt    >  2:6072473/1‑93 (MQ=255)
                                                                                         cATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTTGa  <  1:2921870/93‑1 (MQ=255)
                                                                                          |                                                                                           
GGCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTTGA  >  NC_000913/2980619‑2980800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTCGGCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTTGATG  >  NC_000913/2980616‑2980802
                                                                                             |                                                                                             
CTCGGCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCG                                                                                               <  SRR4302542.5010620/94‑1 (MQ=60)
 TCGGCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGT                                                                                              <  SRR4302542.1244748/94‑1 (MQ=60)
  CGGCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTG                                                                                             >  SRR4302542.7450667/1‑94 (MQ=60)
   GGCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGT                                                                                            >  SRR4302542.4142825/1‑94 (MQ=60)
    GCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTA                                                                                           >  SRR4302542.2511624/1‑94 (MQ=60)
    GCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTA                                                                                           >  SRR4302542.606848/1‑94 (MQ=60)
      AGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAAC                                                                                         >  SRR4302542.979382/1‑94 (MQ=60)
      AGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAAC                                                                                         >  SRR4302542.3004537/1‑94 (MQ=60)
       GTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACC                                                                                        >  SRR4302542.2071838/1‑94 (MQ=60)
       GTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACC                                                                                        >  SRR4302542.5295409/1‑94 (MQ=60)
        TCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCC                                                                                       <  SRR4302542.5431106/94‑1 (MQ=60)
         CCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCG                                                                                      <  SRR4302542.873866/94‑1 (MQ=60)
         CCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCG                                                                                      <  SRR4302542.4546781/94‑1 (MQ=60)
         CCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCG                                                                                      <  SRR4302542.7070563/94‑1 (MQ=60)
          CCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGG                                                                                     <  SRR4302542.4273192/94‑1 (MQ=60)
          CCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGG                                                                                     <  SRR4302542.7602788/94‑1 (MQ=60)
           CCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGG                                                                                    >  SRR4302542.6999722/1‑94 (MQ=60)
           CCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGG                                                                                    >  SRR4302542.804462/1‑94 (MQ=60)
           CCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGG                                                                                    >  SRR4302542.7067029/1‑94 (MQ=60)
            CAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGG                                                                                   >  SRR4302542.6296752/1‑94 (MQ=60)
            CAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGG                                                                                   >  SRR4302542.7140848/1‑94 (MQ=60)
            CAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGG                                                                                   <  SRR4302542.1136503/94‑1 (MQ=60)
            CAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGG                                                                                   <  SRR4302542.5864864/94‑1 (MQ=60)
            CAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGG                                                                                   <  SRR4302542.6063078/94‑1 (MQ=60)
             AACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGC                                                                                  >  SRR4302542.4559861/1‑94 (MQ=60)
             AACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGC                                                                                  >  SRR4302542.1023533/1‑94 (MQ=60)
             AACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGC                                                                                  >  SRR4302542.7581179/1‑94 (MQ=60)
               CGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTA                                                                                >  SRR4302542.4734547/1‑94 (MQ=60)
               CGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTA                                                                                >  SRR4302542.5138972/1‑94 (MQ=60)
                 ACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATC                                                                              <  SRR4302542.488216/94‑1 (MQ=60)
                 ACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATC                                                                              <  SRR4302542.2884783/94‑1 (MQ=60)
                 ACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATC                                                                              >  SRR4302542.1701538/1‑94 (MQ=60)
                  CCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCG                                                                             <  SRR4302542.990873/94‑1 (MQ=60)
                   CAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGC                                                                            >  SRR4302542.7436040/1‑94 (MQ=60)
                   CAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGC                                                                            >  SRR4302542.1284606/1‑94 (MQ=60)
                    AGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCA                                                                           >  SRR4302542.4956262/1‑94 (MQ=60)
                     GCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCAT                                                                          >  SRR4302542.6068764/1‑94 (MQ=60)
                     GCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCAT                                                                          >  SRR4302542.3822291/1‑94 (MQ=60)
                     GCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCAT                                                                          <  SRR4302542.2139940/94‑1 (MQ=60)
                       TGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTA                                                                        >  SRR4302542.4145157/1‑94 (MQ=60)
                       TGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTA                                                                        >  SRR4302542.3414331/1‑94 (MQ=60)
                       TGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCCGGGCTATCGCATTA                                                                        >  SRR4302542.1467431/1‑94 (MQ=60)
                         GAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAAC                                                                      <  SRR4302542.3912232/94‑1 (MQ=60)
                          AATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACA                                                                     >  SRR4302542.2018334/1‑94 (MQ=60)
                          AATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACA                                                                     >  SRR4302542.796417/1‑94 (MQ=60)
                          AATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACA                                                                     <  SRR4302542.3223063/94‑1 (MQ=60)
                          AATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACA                                                                     <  SRR4302542.484970/94‑1 (MQ=60)
                          AATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACA                                                                     <  SRR4302542.2478479/94‑1 (MQ=60)
                          AATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACA                                                                     <  SRR4302542.1921218/94‑1 (MQ=60)
                           ATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACAT                                                                    <  SRR4302542.6993287/94‑1 (MQ=60)
                             GCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTA                                                                  <  SRR4302542.5051650/94‑1 (MQ=60)
                               GGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAAT                                                                <  SRR4302542.6415620/94‑1 (MQ=60)
                               GGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAAT                                                                <  SRR4302542.736827/94‑1 (MQ=60)
                                GTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATG                                                               >  SRR4302542.3748682/1‑94 (MQ=60)
                                  CGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTT                                                             >  SRR4302542.6017032/1‑94 (MQ=60)
                                  CGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTT                                                             >  SRR4302542.7092146/1‑94 (MQ=60)
                                  CGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTT                                                             >  SRR4302542.711556/1‑94 (MQ=60)
                                   GAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTG                                                            >  SRR4302542.5971348/1‑94 (MQ=60)
                                    AGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGTCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGT                                                           >  SRR4302542.5585747/1‑94 (MQ=60)
                                    AGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGT                                                           <  SRR4302542.6585419/94‑1 (MQ=60)
                                     GAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTG                                                          <  SRR4302542.2292812/94‑1 (MQ=60)
                                     GAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTG                                                          <  SRR4302542.1098252/94‑1 (MQ=60)
                                     GAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTG                                                          <  SRR4302542.3986620/94‑1 (MQ=60)
                                     GAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTG                                                          <  SRR4302542.5882129/94‑1 (MQ=60)
                                        TTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTT                                                       <  SRR4302542.4557482/94‑1 (MQ=60)
                                        TTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTT                                                       <  SRR4302542.6401987/94‑1 (MQ=60)
                                        TTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTT                                                       <  SRR4302542.6874886/94‑1 (MQ=60)
                                        TTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTT                                                       >  SRR4302542.4098323/1‑94 (MQ=60)
                                         TTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTA                                                      >  SRR4302542.5140887/1‑94 (MQ=60)
                                         TTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTA                                                      <  SRR4302542.1717468/94‑1 (MQ=60)
                                         TTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTA                                                      >  SRR4302542.576613/1‑94 (MQ=60)
                                          TCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAG                                                     <  SRR4302542.119403/94‑1 (MQ=60)
                                          TCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAG                                                     <  SRR4302542.2993971/94‑1 (MQ=60)
                                          TCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAG                                                     <  SRR4302542.7442163/94‑1 (MQ=60)
                                          TCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAG                                                     <  SRR4302542.4597104/94‑1 (MQ=60)
                                          TCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAG                                                     <  SRR4302542.6350069/94‑1 (MQ=60)
                                             GCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCC                                                  >  SRR4302542.2836598/1‑94 (MQ=60)
                                             GCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCC                                                  <  SRR4302542.3431907/94‑1 (MQ=60)
                                              CGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCA                                                 >  SRR4302542.5299351/1‑94 (MQ=60)
                                              CGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCA                                                 <  SRR4302542.6172766/94‑1 (MQ=60)
                                              CGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCA                                                 >  SRR4302542.3058074/1‑94 (MQ=60)
                                              CGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCA                                                 >  SRR4302542.2188529/1‑94 (MQ=60)
                                               GCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCAT                                                >  SRR4302542.3913691/1‑94 (MQ=60)
                                               GCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCAT                                                <  SRR4302542.1145256/94‑1 (MQ=60)
                                                CTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATT                                               >  SRR4302542.222764/1‑94 (MQ=60)
                                                CTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATT                                               >  SRR4302542.1630242/1‑94 (MQ=60)
                                                 TACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTC                                              >  SRR4302542.7327382/1‑94 (MQ=60)
                                                 TACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTC                                              >  SRR4302542.2182279/1‑94 (MQ=60)
                                                 TACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTC                                              <  SRR4302542.2350000/94‑1 (MQ=60)
                                                 TACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTAGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTttttttaagccattc                                              >  SRR4302542.6235653/1‑79 (MQ=60)
                                                  ACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCG                                             <  SRR4302542.4358186/94‑1 (MQ=60)
                                                  ACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCG                                             <  SRR4302542.6902620/94‑1 (MQ=60)
                                                  ACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCG                                             >  SRR4302542.94592/1‑94 (MQ=60)
                                                   CGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGT                                            >  SRR4302542.2711222/1‑94 (MQ=60)
                                                    GTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTT                                           <  SRR4302542.5137053/94‑1 (MQ=60)
                                                    GTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTT                                           <  SRR4302542.5167448/94‑1 (MQ=60)
                                                     TTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTC                                          <  SRR4302542.3843525/94‑1 (MQ=60)
                                                     TTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTC                                          <  SRR4302542.615611/94‑1 (MQ=60)
                                                     TTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTC                                          <  SRR4302542.4318599/94‑1 (MQ=60)
                                                     TTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTC                                          >  SRR4302542.4504958/1‑94 (MQ=60)
                                                      TGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCG                                         <  SRR4302542.2268576/94‑1 (MQ=60)
                                                      TGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCG                                         >  SRR4302542.383185/1‑94 (MQ=60)
                                                        TTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCC                                       <  SRR4302542.4064241/94‑1 (MQ=60)
                                                        TTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCC                                       <  SRR4302542.1231031/94‑1 (MQ=60)
                                                         TCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCA                                      >  SRR4302542.4453430/1‑94 (MQ=60)
                                                          CATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCAT                                     >  SRR4302542.2260506/1‑94 (MQ=60)
                                                           ATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATC                                    >  SRR4302542.6633665/1‑94 (MQ=60)
                                                           ATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATC                                    >  SRR4302542.7111963/1‑94 (MQ=60)
                                                           ATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATC                                    >  SRR4302542.5340057/1‑94 (MQ=60)
                                                           ATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATC                                    >  SRR4302542.6759833/1‑94 (MQ=60)
                                                            TCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCA                                   >  SRR4302542.2083430/1‑94 (MQ=60)
                                                             CTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCtttctttgcccttcaa                                  >  SRR4302542.1475565/1‑78 (MQ=60)
                                                              TGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAAT                                 >  SRR4302542.5478455/1‑94 (MQ=60)
                                                              TGCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAAT                                 >  SRR4302542.1994228/1‑94 (MQ=60)
                                                               GCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATC                                <  SRR4302542.1733860/94‑1 (MQ=60)
                                                               GCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATC                                >  SRR4302542.1044094/1‑94 (MQ=60)
                                                               GCCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATC                                <  SRR4302542.2898088/94‑1 (MQ=60)
                                                                CCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCG                               >  SRR4302542.1429455/1‑94 (MQ=60)
                                                                CCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCG                               >  SRR4302542.7483665/1‑94 (MQ=60)
                                                                CCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCG                               <  SRR4302542.3464807/94‑1 (MQ=60)
                                                                CCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCG                               >  SRR4302542.4972966/1‑94 (MQ=60)
                                                                CCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCG                               <  SRR4302542.6689514/94‑1 (MQ=60)
                                                                CCCGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCG                               >  SRR4302542.525983/1‑94 (MQ=60)
                                                                 CCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGC                              >  SRR4302542.3047630/1‑94 (MQ=60)
                                                                  CGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCG                             <  SRR4302542.4067114/94‑1 (MQ=60)
                                                                  CGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCG                             >  SRR4302542.7474786/1‑94 (MQ=60)
                                                                  CGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCG                             >  SRR4302542.4929130/1‑94 (MQ=60)
                                                                  CGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCG                             <  SRR4302542.2002224/94‑1 (MQ=60)
                                                                  CGTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCG                             >  SRR4302542.2289117/1‑94 (MQ=60)
                                                                   GTAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGT                            >  SRR4302542.5969277/1‑94 (MQ=60)
                                                                    TAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTC                           >  SRR4302542.4726184/1‑94 (MQ=60)
                                                                    TAGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTC                           <  SRR4302542.3054707/94‑1 (MQ=60)
                                                                     AGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCA                          <  SRR4302542.6405686/94‑1 (MQ=60)
                                                                     AGTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCA                          <  SRR4302542.1876346/94‑1 (MQ=60)
                                                                      GTTGTTGAGTATTGTTGGTCGCTGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCAC                         <  SRR4302542.2970451/94‑1 (MQ=60)
                                                                      GTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCAC                         <  SRR4302542.1156618/94‑1 (MQ=60)
                                                                      GTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCAC                         >  SRR4302542.5206891/1‑94 (MQ=60)
                                                                      GTTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCAC                         >  SRR4302542.6029781/1‑94 (MQ=60)
                                                                       TTGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACA                        <  SRR4302542.5914772/94‑1 (MQ=60)
                                                                        TGTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACAC                       >  SRR4302542.6437753/1‑94 (MQ=60)
                                                                         GTTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACC                      >  SRR4302542.4394730/1‑94 (MQ=60)
                                                                          TTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCC                     <  SRR4302542.1865571/94‑1 (MQ=60)
                                                                          TTGAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCC                     <  SRR4302542.1952576/94‑1 (MQ=60)
                                                                            GAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCAT                   <  SRR4302542.55002/94‑1 (MQ=60)
                                                                            GAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCAT                   >  SRR4302542.2581086/1‑94 (MQ=60)
                                                                            GAGTATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCAT                   <  SRR4302542.545397/94‑1 (MQ=60)
                                                                               TATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCAC                <  SRR4302542.4474122/94‑1 (MQ=60)
                                                                               TATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCAC                <  SRR4302542.3616067/94‑1 (MQ=60)
                                                                                ATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACG               <  SRR4302542.2175967/94‑1 (MQ=60)
                                                                                ATTGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACG               >  SRR4302542.536610/1‑94 (MQ=60)
                                                                                 TTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGC              >  SRR4302542.2441780/1‑94 (MQ=60)
                                                                                  TGTTGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTAACACCCATCACGCC             <  SRR4302542.1671050/94‑1 (MQ=60)
                                                                                   GTTGGTCACCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCG            <  SRR4302542.5974812/94‑1 (MQ=60)
                                                                                     TGGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCT          >  SRR4302542.7456307/1‑94 (MQ=60)
                                                                                      GGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTT         <  SRR4302542.419740/94‑1 (MQ=60)
                                                                                      GGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTT         <  SRR4302542.359550/94‑1 (MQ=60)
                                                                                      GGTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTT         >  SRR4302542.2530999/1‑94 (MQ=60)
                                                                                       GTCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTT        <  SRR4302542.5897596/94‑1 (MQ=60)
                                                                                        TCGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTT       <  SRR4302542.7467392/94‑1 (MQ=60)
                                                                                        TCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTT       <  SRR4302542.316465/94‑1 (MQ=60)
                                                                                         CGCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTT      >  SRR4302542.3045226/1‑94 (MQ=60)
                                                                                          GCCGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTTG     >  SRR4302542.5886176/1‑94 (MQ=60)
                                                                                            CGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTTGAT   >  SRR4302542.5733261/1‑94 (MQ=60)
                                                                                            CGTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTTGAT   >  SRR4302542.5820016/1‑94 (MQ=60)
                                                                                            CATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTTGAT   <  SRR4302542.2949870/94‑1 (MQ=60)
                                                                                             GTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTTGATG  <  SRR4302542.2761101/94‑1 (MQ=60)
                                                                                             GTGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTTGATG  <  SRR4302542.877413/94‑1 (MQ=60)
                                                                                             |                                                                                             
CTCGGCAGTCCCCAACGACCAGCTGGAATGCGGTCGAGAATTTCCGCGCTACGTTGTTCATCTGCCCGTAGTTGTTGAGTATTGTTGGTCGCCATGTAACCCGGGGCTATCGCATTAACATTAATGTTGTGTTTAGCCCATTCGTTCGCCATCAATCGCGTCACACCCATCACGCCGCTTTTTGATG  >  NC_000913/2980616‑2980802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑