Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,225,194	C→T	V440V (GTC→GTT)	ygjI →	putative oxidoreductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,225,194	0	C	T	84.9%	765.3 / 88.8	278	V440V (GTC→GTT)	ygjI	putative oxidoreductase
Reads supporting (aligned to +/- strand): ref base C (16/26); new base T (109/127); total (125/153)
Fisher's exact test for biased strand distribution p-value = 4.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.49e-01

Only 100 of 293 total aligned reads displayed.

TTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGC  >  NC_000913/3225104‑3225283

ttCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTtgg                                                                                         <  2:2518084/93‑1 (MQ=255)

 tCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTtggc                                                                                        >  1:5438208/1‑93 (MQ=255)

 tCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTtggc                                                                                        >  2:3285858/1‑93 (MQ=255)

 tCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTtggc                                                                                        >  2:3516180/1‑93 (MQ=255)

 tCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTcggc                                                                                        <  2:3629483/93‑1 (MQ=255)

   aaTGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCTGAATATTCTGACCATCATTTTTTATAACGTtggcg                                                                                       >  1:3711647/1‑93 (MQ=255)

   aaTGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTtggcgg                                                                                      >  2:7317125/1‑93 (MQ=255)

   aaTGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTtggcgg                                                                                      >  1:6017469/1‑93 (MQ=255)

   aaTGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTtggcgg                                                                                      >  2:2572714/1‑93 (MQ=255)

    aTGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGt                                                                                     >  1:5933949/1‑93 (MQ=255)

    aTGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGt                                                                                     >  1:3692888/1‑93 (MQ=255)

     tGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTa                                                                                    <  2:825382/93‑1 (MQ=255)

      gCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTAt                                                                                   <  2:1727722/93‑1 (MQ=255)

        tGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTg                                                                                 <  2:739693/93‑1 (MQ=255)

          aTTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGtt                                                                               >  1:406764/1‑93 (MQ=255)

          aTTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGtt                                                                               >  1:760010/1‑93 (MQ=255)

           ttGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTa                                                                              <  2:1045887/93‑1 (MQ=255)

            tGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTAt                                                                             >  1:6174024/1‑93 (MQ=255)

             gCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATc                                                                            <  2:5881760/93‑1 (MQ=255)

              cGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCt                                                                           <  2:4729079/93‑1 (MQ=255)

               gATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCtt                                                                          <  1:5626070/93‑1 (MQ=255)

                atatTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTc                                                                         >  2:5619139/1‑93 (MQ=255)

                  atTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCt                                                                       <  2:4905619/93‑1 (MQ=255)

                  atTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCt                                                                       <  2:2902822/93‑1 (MQ=255)

                   tttGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCtt                                                                      >  2:3324359/1‑93 (MQ=255)

                   tttGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCtt                                                                      >  2:2749286/1‑93 (MQ=255)

                   tttGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCtt                                                                      >  1:6275765/1‑93 (MQ=255)

                   tttGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCtt                                                                      >  2:4496576/1‑93 (MQ=255)

                    ttGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTg                                                                     <  2:4290313/93‑1 (MQ=255)

                         gTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCttt                                                                >  1:4726359/1‑93 (MQ=255)

                          tAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTg                                                               <  2:2405453/93‑1 (MQ=255)

                          tAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTg                                                               >  1:5305246/1‑93 (MQ=255)

                           aGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGc                                                              <  1:5239391/93‑1 (MQ=255)

                           aGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGc                                                              <  1:2521462/93‑1 (MQ=255)

                            gggTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCg                                                             >  2:5403533/1‑93 (MQ=255)

                              gTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCgtg                                                           <  1:1063031/93‑1 (MQ=255)

                              gTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCgtg                                                           >  2:5785695/1‑93 (MQ=255)

                              gTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCgtg                                                           <  1:901222/93‑1 (MQ=255)

                               tttGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCgtgg                                                          <  2:2112612/93‑1 (MQ=255)

                               tttGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCgtgg                                                          <  1:464327/93‑1 (MQ=255)

                                  gTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGtggtgg                                                       >  2:441054/1‑93 (MQ=255)

                                   tCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGa                                                      >  1:1318221/1‑93 (MQ=255)

                                   tCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGa                                                      >  1:3861538/1‑93 (MQ=255)

                                   tCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGa                                                      <  1:4868053/93‑1 (MQ=255)

                                   tCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGa                                                      >  1:3036739/1‑93 (MQ=255)

                                   tCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGa                                                      >  2:6595523/1‑93 (MQ=255)

                                    cGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGaa                                                     <  1:5965506/93‑1 (MQ=255)

                                     gCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGaaa                                                    >  2:1368075/1‑93 (MQ=255)

                                      cTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAAt                                                   >  1:6727147/1‑93 (MQ=255)

                                       ttCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATa                                                  >  1:1474568/1‑93 (MQ=255)

                                       ttCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATa                                                  <  2:1239183/93‑1 (MQ=255)

                                        tCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATAc                                                 <  2:3148468/93‑1 (MQ=255)

                                          gACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAg                                               <  1:4218595/93‑1 (MQ=255)

                                          gACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAg                                               <  1:4109061/93‑1 (MQ=255)

                                           aCATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGt                                              <  1:2221999/93‑1 (MQ=255)

                                             aTTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTaa                                            <  1:3838204/93‑1 (MQ=255)

                                              ttCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTaaa                                           <  1:2732174/93‑1 (MQ=255)

                                              ttCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTaaa                                           >  1:493285/1‑93 (MQ=255)

                                               tCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAat                                          <  2:494784/93‑1 (MQ=255)

                                               tCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAat                                          >  1:3324809/1‑93 (MQ=255)

                                               tCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAat                                          <  1:4420469/93‑1 (MQ=255)

                                                cccGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAata                                         <  1:3124373/93‑1 (MQ=255)

                                                 ccGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAatat                                        >  1:2428864/1‑93 (MQ=255)

                                                    aCTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAAtatata                                     >  2:2353824/1‑93 (MQ=255)

                                                     cTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATaa                                    <  2:1559698/93‑1 (MQ=255)

                                                     cTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATaa                                    >  1:7315401/1‑93 (MQ=255)

                                                      tGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATaaa                                   <  2:2249426/93‑1 (MQ=255)

                                                      tGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATaaa                                   >  1:5137980/1‑93 (MQ=255)

                                                      tGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATaaa                                   <  1:4356479/93‑1 (MQ=255)

                                                      tGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATaaa                                   <  1:362887/93‑1 (MQ=255)

                                                      tGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATaaa                                   <  2:6747474/93‑1 (MQ=255)

                                                      tGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATaaa                                   <  1:6782475/93‑1 (MQ=255)

                                                       ggCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAg                                  >  1:5057349/1‑93 (MQ=255)

                                                        gcgc‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAgg                                 <  2:389808/93‑1 (MQ=255)

                                                         cgc‑gAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAggg                                <  2:2393582/93‑1 (MQ=255)

                                                         cgc‑gAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAggg                                <  2:1409086/93‑1 (MQ=255)

                                                          gc‑gAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGa                               >  1:1814835/1‑93 (MQ=255)

                                                          gc‑gAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGa                               >  2:5538259/1‑93 (MQ=255)

                                                          gc‑gAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGa                               >  2:3027492/1‑93 (MQ=255)

                                                          gc‑gAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGa                               >  2:4170286/1‑93 (MQ=255)

                                                          gc‑gAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGa                               <  1:7046265/93‑1 (MQ=255)

                                                             gAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGAtt                             <  1:3545096/93‑1 (MQ=255)

                                                             gAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGAtc                             >  1:710614/1‑92 (MQ=255)

                                                             gAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGAtt                             <  1:3972986/93‑1 (MQ=255)

                                                               atatTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTaa                           >  2:371641/1‑93 (MQ=255)

                                                               atatTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTaa                           >  2:5303372/1‑93 (MQ=255)

                                                               atatTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTaa                           <  2:2045964/93‑1 (MQ=255)

                                                               atatTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTaa                           >  1:6537314/1‑93 (MQ=255)

                                                                 atTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACg                         >  1:6602894/1‑93 (MQ=255)

                                                                 atTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACg                         <  2:1888855/93‑1 (MQ=255)

                                                                  ttCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACgg                        <  1:2474694/93‑1 (MQ=255)

                                                                     tGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTg                     >  2:3946971/1‑93 (MQ=255)

                                                                      gACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGa                    >  2:4620792/1‑93 (MQ=255)

                                                                        ccATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAag                  <  2:515569/93‑1 (MQ=255)

                                                                         catcatTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAaga                 <  2:7079213/93‑1 (MQ=255)

                                                                          atcatTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAagag                >  1:1151233/1‑93 (MQ=255)

                                                                                  ttATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCatat        <  1:4329499/93‑1 (MQ=255)

                                                                                     taACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGa     <  1:1750407/93‑1 (MQ=255)

                                                                                      aaCGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGaa    <  2:1456880/93‑1 (MQ=255)

                                                                                      aaCGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGaa    <  2:6864398/93‑1 (MQ=255)

TTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGC  >  NC_000913/3225104‑3225283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCGACG  >  NC_000913/3225101‑3225287

TGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTT                                                                                               <  SRR4302542.996494/94‑1 (MQ=60)

TGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTT                                                                                               <  SRR4302542.2864186/94‑1 (MQ=60)

TGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTT                                                                                               >  SRR4302542.3564866/1‑94 (MQ=60)

TGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTT                                                                                               <  SRR4302542.140752/94‑1 (MQ=60)

 GTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTG                                                                                              <  SRR4302542.4150528/94‑1 (MQ=60)

 GTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCCACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTG                                                                                              <  SRR4302542.6277228/94‑1 (MQ=60)

  TTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGG                                                                                             <  SRR4302542.3726655/94‑1 (MQ=60)

  TTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGG                                                                                             <  SRR4302542.5463957/94‑1 (MQ=60)

   TTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGC                                                                                            >  SRR4302542.5491046/1‑94 (MQ=60)

   TTCAATGCTGATTGCGATATTTGCCGTAGGGGTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGC                                                                                            >  SRR4302542.2799030/1‑94 (MQ=60)

    TCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCG                                                                                           <  SRR4302542.3796674/94‑1 (MQ=60)

    TCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCG                                                                                           <  SRR4302542.389111/94‑1 (MQ=60)

    TCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCG                                                                                           <  SRR4302542.387807/94‑1 (MQ=60)

     CAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGCTGAATATTCTGACCATCATTTTTTATAACGTTGGCG                                                                                           >  SRR4302542.3748365/1‑94 (MQ=60)

     CAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGG                                                                                          >  SRR4302542.6075744/1‑94 (MQ=60)

      AATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGT                                                                                         >  SRR4302542.3999052/1‑94 (MQ=60)

      AATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGT                                                                                         >  SRR4302542.3729439/1‑94 (MQ=60)

      AATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGT                                                                                         >  SRR4302542.5991438/1‑94 (MQ=60)

       ATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTA                                                                                        <  SRR4302542.5169645/94‑1 (MQ=60)

        TGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTAT                                                                                       <  SRR4302542.7340327/94‑1 (MQ=60)

        TGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTAT                                                                                       <  SRR4302542.6073099/94‑1 (MQ=60)

         GCTGATTGCGATATTTGCCGTATGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATT                                                                                      <  SRR4302542.6945867/94‑1 (MQ=60)

         GCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATT                                                                                      >  SRR4302542.393178/1‑94 (MQ=60)

          CTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTG                                                                                     <  SRR4302542.6494470/94‑1 (MQ=60)

           TGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGT                                                                                    >  SRR4302542.7174695/1‑94 (MQ=60)

           TGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGT                                                                                    >  SRR4302542.5181573/1‑94 (MQ=60)

           TGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGT                                                                                    <  SRR4302542.7353136/94‑1 (MQ=60)

            GATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTT                                                                                   >  SRR4302542.410279/1‑94 (MQ=60)

            GATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTT                                                                                   >  SRR4302542.766595/1‑94 (MQ=60)

              TTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTAT                                                                                 <  SRR4302542.7112702/94‑1 (MQ=60)

              TTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTAT                                                                                 >  SRR4302542.6233870/1‑94 (MQ=60)

                 CGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTT                                                                              >  SRR4302542.502066/1‑94 (MQ=60)

                 CGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTT                                                                              >  SRR4302542.4121184/1‑94 (MQ=60)

                 CGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTT                                                                              >  SRR4302542.7140178/1‑94 (MQ=60)

                 CGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTT                                                                              >  SRR4302542.853907/1‑94 (MQ=60)

                  GATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTC                                                                             <  SRR4302542.5680702/94‑1 (MQ=60)

                    TATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCT                                                                           <  SRR4302542.4374772/94‑1 (MQ=60)

                    TATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCT                                                                           >  SRR4302542.1390663/1‑94 (MQ=60)

                     ATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTTTCTTCCTT                                                                          >  SRR4302542.1224734/1‑94 (MQ=60)

                     ATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTT                                                                          >  SRR4302542.6337621/1‑94 (MQ=60)

                        TGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGC                                                                       <  SRR4302542.4747491/94‑1 (MQ=60)

                        TGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGC                                                                       >  SRR4302542.6840738/1‑94 (MQ=60)

                         GCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCT                                                                      >  SRR4302542.5920747/1‑94 (MQ=60)

                          CCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTT                                                                     >  SRR4302542.6246135/1‑94 (MQ=60)

                          CCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTT                                                                     >  SRR4302542.5482754/1‑94 (MQ=60)

                          CCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTT                                                                     >  SRR4302542.4747850/1‑94 (MQ=60)

                           CGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTT                                                                    <  SRR4302542.1611930/94‑1 (MQ=60)

                           CGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTT                                                                    >  SRR4302542.4772418/1‑94 (MQ=60)

                           CGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTT                                                                    >  SRR4302542.5355633/1‑94 (MQ=60)

                           CGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTT                                                                    <  SRR4302542.5210075/94‑1 (MQ=60)

                            GTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTG                                                                   >  SRR4302542.5356787/1‑94 (MQ=60)

                            GTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTG                                                                   >  SRR4302542.4275178/1‑94 (MQ=60)

                              AGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCG                                                                 <  SRR4302542.5290329/94‑1 (MQ=60)

                              AGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCG                                                                 <  SRR4302542.2545917/94‑1 (MQ=60)

                               GGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGT                                                                >  SRR4302542.1252295/1‑94 (MQ=60)

                               GGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGT                                                                >  SRR4302542.3486751/1‑94 (MQ=60)

                                GGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTG                                                               <  SRR4302542.247338/94‑1 (MQ=60)

                                 GTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGG                                                              <  SRR4302542.1072167/94‑1 (MQ=60)

                                 GTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGG                                                              <  SRR4302542.909015/94‑1 (MQ=60)

                                  TTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGT                                                             <  SRR4302542.468346/94‑1 (MQ=60)

                                    TGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGG                                                           >  SRR4302542.49536/1‑94 (MQ=60)

                                    TGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGG                                                           <  SRR4302542.3340906/94‑1 (MQ=60)

                                     GTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGA                                                          >  SRR4302542.3065702/1‑94 (MQ=60)

                                     GTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGA                                                          >  SRR4302542.3899673/1‑94 (MQ=60)

                                     GTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGA                                                          >  SRR4302542.1329580/1‑94 (MQ=60)

                                     GTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGA                                                          <  SRR4302542.4413172/94‑1 (MQ=60)

                                      TCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAA                                                         <  SRR4302542.4915446/94‑1 (MQ=60)

                                      TCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAA                                                         <  SRR4302542.3141529/94‑1 (MQ=60)

                                       CGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAA                                                        >  SRR4302542.503194/1‑94 (MQ=60)

                                       CGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAA                                                        >  SRR4302542.2457660/1‑94 (MQ=60)

                                       CGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAA                                                        <  SRR4302542.6023255/94‑1 (MQ=60)

                                        GCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAAT                                                       >  SRR4302542.6793373/1‑94 (MQ=60)

                                        GCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAAT                                                       <  SRR4302542.4441519/94‑1 (MQ=60)

                                        GCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAAT                                                       >  SRR4302542.2576588/1‑94 (MQ=60)

                                         CTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATA                                                      >  SRR4302542.4060332/1‑94 (MQ=60)

                                         CTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATA                                                      >  SRR4302542.1487296/1‑94 (MQ=60)

                                          TTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATAC                                                     <  SRR4302542.3697015/94‑1 (MQ=60)

                                          TTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATAC                                                     >  SRR4302542.2499629/1‑94 (MQ=60)

                                            CGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAG                                                   <  SRR4302542.5450668/94‑1 (MQ=60)

                                            CGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAG                                                   >  SRR4302542.243537/1‑94 (MQ=60)

                                             GACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGT                                                  >  SRR4302542.6640000/1‑94 (MQ=60)

                                             GACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGT                                                  >  SRR4302542.6005955/1‑94 (MQ=60)

                                             GACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGT                                                  <  SRR4302542.4260165/94‑1 (MQ=60)

                                             GACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGT                                                  <  SRR4302542.4149566/94‑1 (MQ=60)

                                             GACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGT                                                  <  SRR4302542.804111/94‑1 (MQ=60)

                                              ACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTA                                                 <  SRR4302542.2241116/94‑1 (MQ=60)

                                              ACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTA                                                 <  SRR4302542.5204509/94‑1 (MQ=60)

                                               CATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAA                                                >  SRR4302542.3652688/1‑94 (MQ=60)

                                                ATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATGACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAA                                               >  SRR4302542.6275771/1‑94 (MQ=60)

                                                ATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAA                                               >  SRR4302542.7565427/1‑94 (MQ=60)

                                                ATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAA                                               >  SRR4302542.22446/1‑94 (MQ=60)

                                                ATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAA                                               <  SRR4302542.3876156/94‑1 (MQ=60)

                                                ATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAA                                               >  SRR4302542.497538/1‑94 (MQ=60)

                                                ATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAA                                               <  SRR4302542.6688038/94‑1 (MQ=60)

                                                 TTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAAT                                              <  SRR4302542.2758535/94‑1 (MQ=60)

                                                 TTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAAT                                              >  SRR4302542.3356115/1‑94 (MQ=60)

                                                 TTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAAT                                              <  SRR4302542.3772776/94‑1 (MQ=60)

                                                  TCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATA                                             <  SRR4302542.5641461/94‑1 (MQ=60)

                                                  TCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATA                                             <  SRR4302542.4463887/94‑1 (MQ=60)

                                                   CCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATAT                                            >  SRR4302542.2452474/1‑94 (MQ=60)

                                                   CCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATAT                                            <  SRR4302542.3154091/94‑1 (MQ=60)

                                                    CCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATA                                           >  SRR4302542.423254/1‑94 (MQ=60)

                                                    CCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATA                                           >  SRR4302542.1854248/1‑94 (MQ=60)

                                                      GACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATA                                         <  SRR4302542.5313221/94‑1 (MQ=60)

                                                       ACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAA                                        >  SRR4302542.7387057/1‑94 (MQ=60)

                                                       ACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAA                                        <  SRR4302542.466963/94‑1 (MQ=60)

                                                        CTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAA                                       >  SRR4302542.5187920/1‑94 (MQ=60)

                                                        CTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAA                                       <  SRR4302542.2893606/94‑1 (MQ=60)

                                                         TGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAG                                      <  SRR4302542.6849190/94‑1 (MQ=60)

                                                         TGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAG                                      <  SRR4302542.6766550/94‑1 (MQ=60)

                                                         TGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAG                                      <  SRR4302542.366041/94‑1 (MQ=60)

                                                         TGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAG                                      <  SRR4302542.4399270/94‑1 (MQ=60)

                                                         TGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAG                                      >  SRR4302542.5106457/1‑94 (MQ=60)

                                                          GGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGG                                     <  SRR4302542.5634305/94‑1 (MQ=60)

                                                          GGCGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGG                                     <  SRR4302542.466411/94‑1 (MQ=60)

                                                          GGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGG                                     <  SRR4302542.2199549/94‑1 (MQ=60)

                                                            CGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGA                                   <  SRR4302542.1801213/94‑1 (MQ=60)

                                                            CGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGA                                   >  SRR4302542.1830554/1‑94 (MQ=60)

                                                            CGC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGA                                   <  SRR4302542.6073489/94‑1 (MQ=60)

                                                             GC‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGAT                                  <  SRR4302542.7115464/94‑1 (MQ=60)

                                                              C‑GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATC                                 >  SRR4302542.716748/1‑94 (MQ=60)

                                                                GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTA                                <  SRR4302542.4897220/94‑1 (MQ=60)

                                                                GAATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTA                                <  SRR4302542.3578240/94‑1 (MQ=60)

                                                                GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTA                                >  SRR4302542.7499465/1‑94 (MQ=60)

                                                                GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTA                                <  SRR4302542.4012193/94‑1 (MQ=60)

                                                                 AATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAA                               >  SRR4302542.6601778/1‑94 (MQ=60)

                                                                  ATATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAAC                              >  SRR4302542.4031129/1‑94 (MQ=60)

                                                                   TATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACG                             >  SRR4302542.6667949/1‑94 (MQ=60)

                                                                    ATTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGG                            <  SRR4302542.3501382/94‑1 (MQ=60)

                                                                     TTCTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGC                           <  SRR4302542.2498702/94‑1 (MQ=60)

                                                                       CTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTG                         >  SRR4302542.5944371/1‑94 (MQ=60)

                                                                       CTGACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTG                         >  SRR4302542.6589454/1‑94 (MQ=60)

                                                                         GACCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAA                       >  SRR4302542.2563293/1‑94 (MQ=60)

                                                                           CCATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGA                     <  SRR4302542.6000296/94‑1 (MQ=60)

                                                                            CATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAG                    <  SRR4302542.6817092/94‑1 (MQ=60)

                                                                            CATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAG                    >  SRR4302542.1418973/1‑94 (MQ=60)

                                                                            CATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAG                    >  SRR4302542.1161099/1‑94 (MQ=60)

                                                                            CATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAG                    <  SRR4302542.418687/94‑1 (MQ=60)

                                                                             ATCATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGC                   >  SRR4302542.3141095/1‑94 (MQ=60)

                                                                                ATTTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCC                >  SRR4302542.6230484/1‑94 (MQ=60)

                                                                                  TTTTTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCAT              <  SRR4302542.4390323/94‑1 (MQ=60)

                                                                                     TTATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATT           <  SRR4302542.4372058/94‑1 (MQ=60)

                                                                                      TATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTG          <  SRR4302542.3742733/94‑1 (MQ=60)

                                                                                       ATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGA         >  SRR4302542.6148124/1‑94 (MQ=60)

                                                                                       ATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGA         >  SRR4302542.4346539/1‑94 (MQ=60)

                                                                                       ATAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGA         <  SRR4302542.1115563/94‑1 (MQ=60)

                                                                                        TAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAA        <  SRR4302542.3708139/94‑1 (MQ=60)

                                                                                        TAACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAA        <  SRR4302542.1765598/94‑1 (MQ=60)

                                                                                         AACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAG       <  SRR4302542.1783087/94‑1 (MQ=60)

                                                                                         AACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAG       >  SRR4302542.3289754/1‑94 (MQ=60)

                                                                                         AACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAG       <  SRR4302542.4146265/94‑1 (MQ=60)

                                                                                         AACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAG       <  SRR4302542.1545628/94‑1 (MQ=60)

                                                                                          ACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGC      <  SRR4302542.3731451/94‑1 (MQ=60)

                                                                                          ACGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGC      <  SRR4302542.4975688/94‑1 (MQ=60)

                                                                                           CGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCG     >  SRR4302542.5042614/1‑94 (MQ=60)

                                                                                           CGTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCG     >  SRR4302542.6111201/1‑94 (MQ=60)

                                                                                            GTTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCGA    >  SRR4302542.7225285/1‑94 (MQ=60)

                                                                                             TTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCGAC   <  SRR4302542.3949904/94‑1 (MQ=60)

                                                                                             TTGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCGAC   <  SRR4302542.2357821/94‑1 (MQ=60)

                                                                                              TGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCGACG  >  SRR4302542.4691157/1‑94 (MQ=60)

                                                                                              TGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCGACG  <  SRR4302542.4023717/94‑1 (MQ=60)

                                                                                              TGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCGACG  <  SRR4302542.5772000/94‑1 (MQ=60)

TGTTTCAATGCTGATTGCGATATTTGCCGTAGGGTTTGTCGCTTCGACATTCCCGACTGGCGC‑GAATATTCTGACCATCATTTTTTATAACGTCGGCGGTATTGTTATCTTCCTTGGCTTTGCGTGGTGGAAATACAGTAAATATATAAAGGGATTAACGGCTGAAGAGCGCCATATTGAAGCGACG  >  NC_000913/3225101‑3225287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`