Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,242,993	A→G	T84A (ACC→GCC)	exuT →	ExuT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,242,993	0	A	G	87.6%	780.3 / 83.2	314	T84A (ACC→GCC)	exuT	ExuT
Reads supporting (aligned to +/- strand): ref base A (21/18); new base G (134/141); total (155/159)
Fisher's exact test for biased strand distribution p-value = 6.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01

Only 100 of 314 total aligned reads displayed.

CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGT  >  NC_000913/3242903‑3243082

cTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGcc                                                                                         >  2:2948677/1‑93 (MQ=255)

cTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGcc                                                                                         <  1:817520/93‑1 (MQ=255)

 tGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCAccc                                                                                        <  1:2059133/93‑1 (MQ=255)

    tGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAAc                                                                                     >  1:7447831/1‑93 (MQ=255)

    tGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAAc                                                                                     >  1:3070037/1‑93 (MQ=255)

       cGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGt                                                                                  <  2:6694579/93‑1 (MQ=255)

        gCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTa                                                                                 <  2:5235005/93‑1 (MQ=255)

        gCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTa                                                                                 <  1:5878878/93‑1 (MQ=255)

        gCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTa                                                                                 <  1:3364209/93‑1 (MQ=255)

         cTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAt                                                                                <  1:1832680/93‑1 (MQ=255)

         cTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAt                                                                                <  1:3730305/93‑1 (MQ=255)

          tCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAtt                                                                               <  1:5716137/93‑1 (MQ=255)

          tCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTAtt                                                                               <  2:2580132/93‑1 (MQ=255)

           cGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTc                                                                              <  1:1374835/93‑1 (MQ=255)

           cGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTc                                                                              <  2:6552777/93‑1 (MQ=255)

            ggCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGGAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTcc                                                                             >  1:6185815/1‑93 (MQ=255)

            ggCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTcc                                                                             <  2:5628170/93‑1 (MQ=255)

            ggCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTcc                                                                             <  2:314587/93‑1 (MQ=255)

             gCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCt                                                                            <  2:1714052/93‑1 (MQ=255)

              cACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCta                                                                           <  2:7503370/93‑1 (MQ=255)

              cACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCta                                                                           <  2:5487878/93‑1 (MQ=255)

               aCCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtat                                                                          <  2:6170041/93‑1 (MQ=255)

               aCCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtat                                                                          >  2:3937554/1‑93 (MQ=255)

               aCCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtat                                                                          >  2:6981178/1‑93 (MQ=255)

                ccGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtata                                                                         >  1:5331442/1‑93 (MQ=255)

                ccGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtata                                                                         <  1:934162/93‑1 (MQ=255)

                ccGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtata                                                                         >  2:3430293/1‑93 (MQ=255)

                ccGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtata                                                                         <  2:4105748/93‑1 (MQ=255)

                ccGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCtata                                                                         >  2:573057/1‑93 (MQ=255)

                ccGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTCATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCtata                                                                         >  2:2630516/1‑93 (MQ=255)

                  gTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATatc                                                                       <  2:3855651/93‑1 (MQ=255)

                   tGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATatca                                                                      <  1:2541357/93‑1 (MQ=255)

                     cTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATatcatc                                                                    <  1:5239056/93‑1 (MQ=255)

                     cTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATatcatc                                                                    >  2:1892808/1‑93 (MQ=255)

                     cTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATatcatc                                                                    <  2:6214075/93‑1 (MQ=255)

                      ttGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCg                                                                   >  2:2811136/1‑93 (MQ=255)

                          ttACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGc                                                               <  1:6681515/93‑1 (MQ=255)

                             ccTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTa                                                            <  1:6593556/93‑1 (MQ=255)

                              cTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTAt                                                           >  2:2494237/1‑93 (MQ=255)

                              cTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTAt                                                           >  2:5330052/1‑93 (MQ=255)

                               tGACGCGTAACACTGTGGCGGCAGCTTCGCCAACTCTGATGGGAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATTATTGCCGCCTAtt                                                          >  1:4287587/1‑93 (MQ=255)

                                gACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTc                                                         <  2:555114/93‑1 (MQ=255)

                                 aCGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTct                                                        <  1:3511374/93‑1 (MQ=255)

                                 aCGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTct                                                        <  1:3972413/93‑1 (MQ=255)

                                 aCGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTACATCATCGCAGCCTATTct                                                        >  1:3480001/1‑93 (MQ=255)

                                   gcgTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTctgc                                                      >  1:4657051/1‑93 (MQ=255)

                                      tAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCtgctgc                                                   <  1:4550439/93‑1 (MQ=255)

                                       aaCACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTgctgct                                                  <  2:3352677/93‑1 (MQ=255)

                                           cTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTtata                                              <  1:6063354/93‑1 (MQ=255)

                                           cTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGATGCTtata                                              <  2:6668164/93‑1 (MQ=255)

                                           cTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTtata                                              >  2:801200/1‑93 (MQ=255)

                                               ggcggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGt                                          <  1:2267333/93‑1 (MQ=255)

                                               ggcggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGt                                          <  1:4907335/93‑1 (MQ=255)

                                               ggcggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGt                                          <  1:188884/93‑1 (MQ=255)

                                                 cggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGCTCa                                        <  1:6974122/93‑1 (MQ=255)

                                                  ggcAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCAt                                       <  1:3576899/93‑1 (MQ=255)

                                                      gCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCaa                                   >  1:1657239/1‑93 (MQ=255)

                                                      gCTGCGCCAACTCTGATGGAAGAGCTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCaa                                   >  1:3907764/1‑93 (MQ=255)

                                                       cTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAc                                  >  2:6373770/1‑93 (MQ=255)

                                                        tGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAcc                                 <  1:1182360/93‑1 (MQ=255)

                                                          cgcCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCgg                               <  2:7254433/93‑1 (MQ=255)

                                                           gcCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCCGCCTATTCTGCTGCTTATACGGTCATGCAACCGGt                              <  2:4521300/93‑1 (MQ=255)

                                                            ccAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTa                             <  1:1669270/93‑1 (MQ=255)

                                                            ccAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTa                             >  2:3023386/1‑93 (MQ=255)

                                                            ccAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTa                             >  1:5101311/1‑93 (MQ=255)

                                                               aCTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCa                          >  1:6548727/1‑93 (MQ=255)

                                                               aCTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCa                          >  2:4264607/1‑93 (MQ=255)

                                                               aCTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCa                          >  1:4478806/1‑93 (MQ=255)

                                                                ctctGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAg                         >  2:4819723/1‑93 (MQ=255)

                                                                 tctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAgg                        >  1:1570167/1‑93 (MQ=255)

                                                                 tctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAgg                        >  2:6327357/1‑93 (MQ=255)

                                                                  ctGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGt                       >  1:7101933/1‑93 (MQ=255)

                                                                   tGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGtt                      >  1:2672254/1‑93 (MQ=255)

                                                                    gATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTa                     <  2:3314778/93‑1 (MQ=255)

                                                                    gATGGAAGAGTTAAACATCTCCGCACAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTa                     >  2:7362994/1‑93 (MQ=255)

                                                                    gATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTa                     <  2:6817007/93‑1 (MQ=255)

                                                                     aTGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTAt                    <  2:215189/93‑1 (MQ=255)

                                                                      tGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATg                   >  1:2547557/1‑93 (MQ=255)

                                                                      tGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATg                   >  1:5519207/1‑93 (MQ=255)

                                                                       ggAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGt                  >  1:4865140/1‑93 (MQ=255)

                                                                       ggAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGt                  >  1:2840114/1‑93 (MQ=255)

                                                                       ggAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGt                  <  1:6267656/93‑1 (MQ=255)

                                                                       ggAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGt                  <  1:2164806/93‑1 (MQ=255)

                                                                        gAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTa                 >  1:5069356/1‑93 (MQ=255)

                                                                          agagTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACt               >  1:3256103/1‑93 (MQ=255)

                                                                            agTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTgg             <  2:153148/93‑1 (MQ=255)

                                                                             gTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            <  1:7368789/93‑1 (MQ=255)

                                                                             gTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            <  1:5630645/93‑1 (MQ=255)

                                                                             gTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            <  2:4925161/93‑1 (MQ=255)

                                                                             gTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGa            >  1:1975880/1‑93 (MQ=255)

                                                                               tAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAtg          >  1:4072517/1‑93 (MQ=255)

                                                                                aaaCATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAtgt         <  2:1327808/93‑1 (MQ=255)

                                                                                 aaCATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAtgtg        >  2:3733307/1‑93 (MQ=255)

                                                                                  aCATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGc       <  2:4718086/93‑1 (MQ=255)

                                                                                    aTCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTg     >  2:5940704/1‑93 (MQ=255)

                                                                                     tctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTgg    <  1:4149154/93‑1 (MQ=255)

                                                                                     tctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTgg    >  2:5051715/1‑93 (MQ=255)

                                                                                      ctcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTggg   <  2:7127216/93‑1 (MQ=255)

                                                                                       tcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGt  >  2:206796/1‑93 (MQ=255)

                                                                                       tcCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGt  <  2:4580028/93‑1 (MQ=255)

CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGT  >  NC_000913/3242903‑3243082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GCACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTACG  >  NC_000913/3242900‑3243085

GCACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCA                                                                                              <  SRR4302542.1768821/94‑1 (MQ=60)

GCACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCAGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCG                                                                                              <  SRR4302542.2446330/94‑1 (MQ=60)

  ACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCC                                                                                            >  SRR4302542.2033567/1‑94 (MQ=60)

  ACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCC                                                                                            >  SRR4302542.1573031/1‑94 (MQ=60)

   CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCC                                                                                           <  SRR4302542.824584/94‑1 (MQ=60)

   CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCC                                                                                           >  SRR4302542.3519976/1‑94 (MQ=60)

   CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCC                                                                                           >  SRR4302542.318095/1‑94 (MQ=60)

   CTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCC                                                                                           >  SRR4302542.2073305/1‑94 (MQ=60)

    TGGTGACGCTCGGCACCGTTCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCA                                                                                          >  SRR4302542.6640751/1‑94 (MQ=60)

    TGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCA                                                                                          <  SRR4302542.2076922/94‑1 (MQ=60)

     GGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAA                                                                                         >  SRR4302542.542048/1‑94 (MQ=60)

      GTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAAC                                                                                        >  SRR4302542.7520754/1‑94 (MQ=60)

      GTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAAC                                                                                        <  SRR4302542.5743508/94‑1 (MQ=60)

      GTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAAC                                                                                        >  SRR4302542.4629041/1‑94 (MQ=60)

      GTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAAC                                                                                        >  SRR4302542.209967/1‑94 (MQ=60)

      GTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAAC                                                                                        <  SRR4302542.1881390/94‑1 (MQ=60)

      GTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAAC                                                                                        >  SRR4302542.3099296/1‑94 (MQ=60)

         ACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGT                                                                                     >  SRR4302542.3961634/1‑94 (MQ=60)

          CGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTA                                                                                    <  SRR4302542.3056873/94‑1 (MQ=60)

           GCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTTTGGCGGCAGCTGCGCAAACTCTTATGGAAGAGTTAAACATCTCCGCCCAACAGTAT                                                                                   <  SRR4302542.2392453/94‑1 (MQ=60)

           GCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAT                                                                                   <  SRR4302542.3395811/94‑1 (MQ=60)

           GCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAT                                                                                   <  SRR4302542.4738713/94‑1 (MQ=60)

           GCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTAT                                                                                   <  SRR4302542.5935873/94‑1 (MQ=60)

            CTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATT                                                                                  <  SRR4302542.1848555/94‑1 (MQ=60)

            CTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATT                                                                                  <  SRR4302542.3767252/94‑1 (MQ=60)

            CTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATT                                                                                  <  SRR4302542.3521859/94‑1 (MQ=60)

             TCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTC                                                                                 <  SRR4302542.2079879/94‑1 (MQ=60)

             TCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTC                                                                                 <  SRR4302542.5771615/94‑1 (MQ=60)

             TCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTC                                                                                 <  SRR4302542.4696853/94‑1 (MQ=60)

              CGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGGAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCC                                                                                >  SRR4302542.6245868/1‑94 (MQ=60)

              CGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCC                                                                                <  SRR4302542.1386722/94‑1 (MQ=60)

              CGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCC                                                                                <  SRR4302542.1673103/94‑1 (MQ=60)

               GGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCT                                                                               <  SRR4302542.1279258/94‑1 (MQ=60)

                 CACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTAT                                                                             <  SRR4302542.4323191/94‑1 (MQ=60)

                 CACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTAT                                                                             >  SRR4302542.7270023/1‑94 (MQ=60)

                  ACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATA                                                                            >  SRR4302542.467101/1‑94 (MQ=60)

                  ACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATA                                                                            >  SRR4302542.287206/1‑94 (MQ=60)

                  ACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATA                                                                            <  SRR4302542.5389152/94‑1 (MQ=60)

                  ACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATA                                                                            >  SRR4302542.5383245/1‑94 (MQ=60)

                  ACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATA                                                                            >  SRR4302542.5295475/1‑94 (MQ=60)

                   CCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATAT                                                                           <  SRR4302542.5338765/94‑1 (MQ=60)

                   CCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATAT                                                                           <  SRR4302542.942206/94‑1 (MQ=60)

                   CCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATAT                                                                           <  SRR4302542.2785905/94‑1 (MQ=60)

                    CGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATC                                                                          >  SRR4302542.5268789/1‑94 (MQ=60)

                    CGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATC                                                                          <  SRR4302542.3303510/94‑1 (MQ=60)

                      TGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCAT                                                                        >  SRR4302542.2851774/1‑94 (MQ=60)

                      TGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCAT                                                                        <  SRR4302542.6448396/94‑1 (MQ=60)

                      TGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCAT                                                                        <  SRR4302542.2565993/94‑1 (MQ=60)

                       GCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATC                                                                       <  SRR4302542.6360376/94‑1 (MQ=60)

                        CTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCG                                                                      <  SRR4302542.5289993/94‑1 (MQ=60)

                        CTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCG                                                                      <  SRR4302542.5751972/94‑1 (MQ=60)

                          TGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCA                                                                    >  SRR4302542.7484426/1‑94 (MQ=60)

                           GGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAG                                                                   >  SRR4302542.4148039/1‑94 (MQ=60)

                            GTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGC                                                                  >  SRR4302542.6208048/1‑94 (MQ=60)

                             TTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCC                                                                 >  SRR4302542.2254848/1‑94 (MQ=60)

                             TTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCC                                                                 <  SRR4302542.6747334/94‑1 (MQ=60)

                               ACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTA                                                               <  SRR4302542.3953661/94‑1 (MQ=60)

                               ACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTA                                                               <  SRR4302542.629463/94‑1 (MQ=60)

                               ACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTA                                                               <  SRR4302542.3264355/94‑1 (MQ=60)

                                CCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTAT                                                              >  SRR4302542.4500960/1‑94 (MQ=60)

                                CCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTAT                                                              <  SRR4302542.6658522/94‑1 (MQ=60)

                                CCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTAT                                                              >  SRR4302542.1971335/1‑94 (MQ=60)

                                 CTGACGCGTAACACTGTGGCGGCAGCTTCGCCAACTCTGATGGGAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATTATTGCCGCCTATT                                                             >  SRR4302542.4329757/1‑94 (MQ=60)

                                 CTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATT                                                             <  SRR4302542.342460/94‑1 (MQ=60)

                                  TGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTC                                                            >  SRR4302542.6026462/1‑94 (MQ=60)

                                   GACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTACATCATCGCAGCCTATTCT                                                           >  SRR4302542.3512569/1‑94 (MQ=60)

                                    ACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTG                                                          <  SRR4302542.4316360/94‑1 (MQ=60)

                                    ACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTG                                                          <  SRR4302542.3544195/94‑1 (MQ=60)

                                    ACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTG                                                          <  SRR4302542.4057190/94‑1 (MQ=60)

                                    ACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTG                                                          <  SRR4302542.4011611/94‑1 (MQ=60)

                                     CGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGC                                                         >  SRR4302542.4702579/1‑94 (MQ=60)

                                     CGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGC                                                         >  SRR4302542.7472549/1‑94 (MQ=60)

                                     CGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGC                                                         <  SRR4302542.1419725/94‑1 (MQ=60)

                                      GCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCT                                                        <  SRR4302542.286885/94‑1 (MQ=60)

                                      GCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCT                                                        <  SRR4302542.5916532/94‑1 (MQ=60)

                                      GCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCT                                                        <  SRR4302542.178935/94‑1 (MQ=60)

                                         TAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCT                                                     <  SRR4302542.4594973/94‑1 (MQ=60)

                                            CACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTAT                                                  <  SRR4302542.4545448/94‑1 (MQ=60)

                                            CACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTAT                                                  <  SRR4302542.1825812/94‑1 (MQ=60)

                                             ACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTGTATCATCGCAGCCTATTCTGCTGCTTATA                                                 >  SRR4302542.3729418/1‑94 (MQ=60)

                                             ACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATA                                                 >  SRR4302542.4834376/1‑94 (MQ=60)

                                              CTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATAC                                                <  SRR4302542.6122044/94‑1 (MQ=60)

                                                GTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGG                                              <  SRR4302542.586214/94‑1 (MQ=60)

                                                 TGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGT                                             <  SRR4302542.1593919/94‑1 (MQ=60)

                                                  GGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTC                                            <  SRR4302542.4955064/94‑1 (MQ=60)

                                                  GGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTC                                            <  SRR4302542.2286843/94‑1 (MQ=60)

                                                  GGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTC                                            <  SRR4302542.190487/94‑1 (MQ=60)

                                                    CGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGCTCAT                                          <  SRR4302542.7042628/94‑1 (MQ=60)

                                                     GGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATG                                         <  SRR4302542.3610278/94‑1 (MQ=60)

                                                     GGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATG                                         >  SRR4302542.6744020/1‑94 (MQ=60)

                                                       CAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCA                                       >  SRR4302542.7149085/1‑94 (MQ=60)

                                                        AGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAA                                      >  SRR4302542.1671557/1‑94 (MQ=60)

                                                        AGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAA                                      >  SRR4302542.6628557/1‑94 (MQ=60)

                                                        AGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAA                                      >  SRR4302542.2483114/1‑94 (MQ=60)

                                                        AGCTGCGCCAACTCTGATGGAAGAGCTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAA                                      >  SRR4302542.3946337/1‑94 (MQ=60)

                                                         GCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAAC                                     >  SRR4302542.1679275/1‑94 (MQ=60)

                                                           TGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCG                                   <  SRR4302542.1192562/94‑1 (MQ=60)

                                                           TGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCG                                   <  SRR4302542.6716458/94‑1 (MQ=60)

                                                           TGCGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTATGCTGCTTATACGGTCATGCAACCG                                   >  SRR4302542.5544079/1‑94 (MQ=60)

                                                             CGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGT                                 <  SRR4302542.4953535/94‑1 (MQ=60)

                                                             CGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGT                                 <  SRR4302542.561885/94‑1 (MQ=60)

                                                             CGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGT                                 <  SRR4302542.4445769/94‑1 (MQ=60)

                                                             CGCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGT                                 >  SRR4302542.354777/1‑94 (MQ=60)

                                                              GCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTA                                >  SRR4302542.5150873/1‑94 (MQ=60)

                                                              GCCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTA                                >  SRR4302542.2026855/1‑94 (MQ=60)

                                                               CCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAG                               <  SRR4302542.1683689/94‑1 (MQ=60)

                                                               CCAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGGAG                               >  SRR4302542.3604993/1‑94 (MQ=60)

                                                                CAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGC                              >  SRR4302542.5174186/1‑94 (MQ=60)

                                                                CAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGC                              >  SRR4302542.416925/1‑94 (MQ=60)

                                                                CAACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGC                              >  SRR4302542.2244772/1‑94 (MQ=60)

                                                                 AACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCA                             >  SRR4302542.34874/1‑94 (MQ=60)

                                                                 AACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCA                             >  SRR4302542.6613295/1‑94 (MQ=60)

                                                                 AACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCA                             >  SRR4302542.4522778/1‑94 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                            >  SRR4302542.3738/1‑94 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                            <  SRR4302542.6053036/94‑1 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                            >  SRR4302542.7256101/1‑94 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                            >  SRR4302542.2590682/1‑94 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                            >  SRR4302542.6247969/1‑94 (MQ=60)

                                                                  ACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAG                            <  SRR4302542.827796/94‑1 (MQ=60)

                                                                   CTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGG                           >  SRR4302542.1583730/1‑94 (MQ=60)

                                                                   CTCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGG                           >  SRR4302542.16054/1‑94 (MQ=60)

                                                                    TCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGT                          >  SRR4302542.7171602/1‑94 (MQ=60)

                                                                    TCTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGT                          <  SRR4302542.768298/94‑1 (MQ=60)

                                                                     NNGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTT                         <  SRR4302542.1860153/94‑1 (MQ=60)

                                                                     CTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTT                         >  SRR4302542.2698039/1‑94 (MQ=60)

                                                                     CTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTT                         >  SRR4302542.645070/1‑94 (MQ=60)

                                                                     CTGATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTT                         <  SRR4302542.4948964/94‑1 (MQ=60)

                                                                       GATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTAT                       >  SRR4302542.6748241/1‑94 (MQ=60)

                                                                       GATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTAT                       <  SRR4302542.6904398/94‑1 (MQ=60)

                                                                       GATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTAT                       <  SRR4302542.2589359/94‑1 (MQ=60)

                                                                        ATGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATG                      >  SRR4302542.2572241/1‑94 (MQ=60)

                                                                        ATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATG                      >  SRR4302542.388025/1‑94 (MQ=60)

                                                                        ATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATG                      >  SRR4302542.5572843/1‑94 (MQ=60)

                                                                         TGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGT                     >  SRR4302542.2867404/1‑94 (MQ=60)

                                                                         TGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGT                     <  SRR4302542.5140967/94‑1 (MQ=60)

                                                                         TGGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGT                     >  SRR4302542.4912510/1‑94 (MQ=60)

                                                                          GGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTA                    <  SRR4302542.2183449/94‑1 (MQ=60)

                                                                          GGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTA                    <  SRR4302542.4961385/94‑1 (MQ=60)

                                                                          GGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTA                    <  SRR4302542.6329431/94‑1 (MQ=60)

                                                                          GGAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTA                    >  SRR4302542.5118618/1‑94 (MQ=60)

                                                                           GAAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTAC                   <  SRR4302542.3383587/94‑1 (MQ=60)

                                                                            AAGAGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACT                  >  SRR4302542.3286860/1‑94 (MQ=60)

                                                                               AGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGA               >  SRR4302542.762714/1‑94 (MQ=60)

                                                                               AGTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGA               >  SRR4302542.7583203/1‑94 (MQ=60)

                                                                               AGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGA               >  SRR4302542.1992945/1‑94 (MQ=60)

                                                                                GTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAT              <  SRR4302542.7440958/94‑1 (MQ=60)

                                                                                GTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAT              <  SRR4302542.5685312/94‑1 (MQ=60)

                                                                                GTTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAT              >  SRR4302542.5119535/1‑94 (MQ=60)

                                                                                GTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGAT              >  SRR4302542.1979845/1‑94 (MQ=60)

                                                                                 TTAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATG             >  SRR4302542.4112669/1‑94 (MQ=60)

                                                                                  TAAACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGCATGT            <  SRR4302542.7044995/94‑1 (MQ=60)

                                                                                    AACATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGC          >  SRR4302542.6163833/1‑94 (MQ=60)

                                                                                      CATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTG        <  SRR4302542.2572155/94‑1 (MQ=60)

                                                                                      CATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTG        <  SRR4302542.4110891/94‑1 (MQ=60)

                                                                                       ATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGG       >  SRR4302542.3792451/1‑94 (MQ=60)

                                                                                       ATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGG       >  SRR4302542.4590174/1‑94 (MQ=60)

                                                                                       ATCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGG       >  SRR4302542.3936756/1‑94 (MQ=60)

                                                                                        TCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGG      <  SRR4302542.4190024/94‑1 (MQ=60)

                                                                                        TCTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGG      >  SRR4302542.5677785/1‑94 (MQ=60)

                                                                                         CTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGT     >  SRR4302542.2570310/1‑94 (MQ=60)

                                                                                         CTCCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGT     <  SRR4302542.1200589/94‑1 (MQ=60)

                                                                                         CTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGT     >  SRR4302542.5115562/1‑94 (MQ=60)

                                                                                         CTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGT     <  SRR4302542.882203/94‑1 (MQ=60)

                                                                                           CCGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTAC   <  SRR4302542.7219869/94‑1 (MQ=60)

                                                                                            CGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTACG  >  SRR4302542.6399823/1‑94 (MQ=60)

                                                                                            CGCCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTACG  <  SRR4302542.3721050/94‑1 (MQ=60)

GCACTGGTGACGCTCGGCACCGTGCTTGGTTACCTGACGCGTAACACTGTGGCGGCAGCTGCGCCAACTCTGATGGAAGAGTTAAACATCTCCACCCAACAGTATTCCTATATCATCGCAGCCTATTCTGCTGCTTATACGGTCATGCAACCGGTAGCAGGTTATGTACTGGATGTGCTGGGTACG  >  NC_000913/3242900‑3243085

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`