Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,412,612 A→G Q371R (CAG→CGG)  acrE → AcrE

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,412,6120AG84.5% 740.1 / 137.2 335Q371R (CAG→CGG) acrEAcrE
Reads supporting (aligned to +/- strand):  ref base A (24/28);  new base G (129/154);  total (153/182)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.96e-01

Only 100 of 337 total aligned reads displayed.

GGCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTG  >  NC_000913/3412520‑3412703
                                                                                            |                                                                                           
ggCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCa                                                                                             <  1:1067231/93‑1 (MQ=255)
ggCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCa                                                                                             >  1:4873699/1‑93 (MQ=255)
   gATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCGAAAAGCGCGTCCGGGAGAGCGGGt                                                                                          <  2:3286718/93‑1 (MQ=255)
     ttGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTa                                                                                        >  2:268441/1‑93 (MQ=255)
         cGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGc                                                                                    <  2:2875192/93‑1 (MQ=255)
         cGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGc                                                                                    <  1:4591658/93‑1 (MQ=255)
          gATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGcc                                                                                   >  2:1126775/1‑93 (MQ=255)
          gATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGcc                                                                                   >  1:3389075/1‑93 (MQ=255)
            tAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCAc                                                                                 >  2:7165518/1‑93 (MQ=255)
            tAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCAc                                                                                 <  2:2598452/93‑1 (MQ=255)
              aaTGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTa                                                                               >  2:902954/1‑93 (MQ=255)
              aaTGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTa                                                                               <  1:6705005/93‑1 (MQ=255)
              aaTGGTTGATTACTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTa                                                                               <  1:6235013/93‑1 (MQ=255)
               acggTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTAc                                                                              <  2:1486864/91‑1 (MQ=255)
               aTGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTAc                                                                              <  2:4602629/93‑1 (MQ=255)
               aTGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTAc                                                                              >  2:5996212/1‑93 (MQ=255)
                tGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTAcc                                                                             <  1:3604822/93‑1 (MQ=255)
                 ggTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCg                                                                            >  1:5441945/1‑93 (MQ=255)
                  gTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGa                                                                           >  1:202288/1‑93 (MQ=255)
                   ttGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGAt                                                                          >  1:4758280/1‑93 (MQ=255)
                    tGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATa                                                                         <  2:5124755/93‑1 (MQ=255)
                       ttAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATAccc                                                                      >  1:7524737/1‑93 (MQ=255)
                        tAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATAcccc                                                                     <  1:3845796/93‑1 (MQ=255)
                        tAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATAcccc                                                                     <  2:4522328/93‑1 (MQ=255)
                        tAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATAcccc                                                                     >  2:4157475/1‑93 (MQ=255)
                           tGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGc                                                                  >  2:1331969/1‑93 (MQ=255)
                           tGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGc                                                                  >  1:2765418/1‑93 (MQ=255)
                           tGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGc                                                                  >  2:308850/1‑93 (MQ=255)
                             aaGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAg                                                                >  2:1006915/1‑93 (MQ=255)
                             aaGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAg                                                                >  1:2917534/1‑93 (MQ=255)
                              aGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGa                                                               <  1:4108691/93‑1 (MQ=255)
                              aGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGa                                                               <  2:4228904/93‑1 (MQ=255)
                               ggACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGAt                                                              <  1:4297043/93‑1 (MQ=255)
                               ggACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGAt                                                              >  1:1248655/1‑93 (MQ=255)
                                gACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATa                                                             >  2:5845259/1‑93 (MQ=255)
                                  cTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACt                                                           <  2:392835/93‑1 (MQ=255)
                                   tGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTg                                                          >  2:5281239/1‑93 (MQ=255)
                                   tGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTg                                                          >  2:624297/1‑93 (MQ=255)
                                   tGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTg                                                          <  1:5147098/93‑1 (MQ=255)
                                    gAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGc                                                         >  2:1365309/1‑93 (MQ=255)
                                    gAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGc                                                         >  2:6501394/1‑93 (MQ=255)
                                    gAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGc                                                         >  2:4904519/1‑93 (MQ=255)
                                    gAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGc                                                         >  1:1021596/1‑93 (MQ=255)
                                     aaaTCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCa                                                        <  1:6121854/93‑1 (MQ=255)
                                      aaTCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCAt                                                       <  2:3795453/93‑1 (MQ=255)
                                        tCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCg                                                     >  2:7349779/1‑93 (MQ=255)
                                         cTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGa                                                    <  1:3673457/93‑1 (MQ=255)
                                          tGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGaa                                                   >  2:2076064/1‑93 (MQ=255)
                                            gCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGt                                                 >  1:6925146/1‑93 (MQ=255)
                                            gCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGt                                                 >  1:1121537/1‑93 (MQ=255)
                                              gATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTaa                                               <  1:4652926/93‑1 (MQ=255)
                                               aTCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAg                                              <  2:5746581/93‑1 (MQ=255)
                                               aTCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAg                                              <  2:4490849/93‑1 (MQ=255)
                                               aTCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAg                                              >  2:1656649/1‑93 (MQ=255)
                                               aTCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAg                                              >  2:2370302/1‑93 (MQ=255)
                                                tCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAgg                                             <  1:784138/93‑1 (MQ=255)
                                                tCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAgg                                             >  2:3033535/1‑93 (MQ=255)
                                                tCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAgg                                             <  2:313306/93‑1 (MQ=255)
                                                  aaGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTa                                           <  1:7495540/93‑1 (MQ=255)
                                                  aaGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTa                                           >  2:686618/1‑93 (MQ=255)
                                                  aaGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTa                                           >  2:6306730/1‑93 (MQ=255)
                                                   aGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTaa                                          >  1:2334653/1‑93 (MQ=255)
                                                   aGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTaa                                          >  2:3556139/1‑93 (MQ=255)
                                                    gTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAAt                                         <  1:5999584/93‑1 (MQ=255)
                                                     tCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATc                                        >  2:5199880/1‑93 (MQ=255)
                                                      cATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCt                                       >  1:2478316/1‑93 (MQ=255)
                                                       aTTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTg                                      >  1:5112387/1‑93 (MQ=255)
                                                        ttGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGa                                     <  2:2719644/93‑1 (MQ=255)
                                                          gTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACa                                   <  1:923822/93‑1 (MQ=255)
                                                           tCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACAt                                  >  2:2960084/1‑93 (MQ=255)
                                                           tCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACAt                                  >  1:6487317/1‑93 (MQ=255)
                                                            cAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATg                                 <  2:1793865/93‑1 (MQ=255)
                                                             aGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATgg                                <  2:557769/93‑1 (MQ=255)
                                                              gCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCGCTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGc                               <  1:326431/93‑1 (MQ=255)
                                                               cGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCa                              >  1:2544249/1‑93 (MQ=255)
                                                                 gCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCaaa                            <  1:2122371/93‑1 (MQ=255)
                                                                  ccTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAAc                           <  1:1429245/93‑1 (MQ=255)
                                                                   cTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACt                          >  2:7230397/1‑93 (MQ=255)
                                                                   cTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACt                          >  2:5490170/1‑93 (MQ=255)
                                                                    tGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACtt                         >  1:6857851/1‑93 (MQ=255)
                                                                      cAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACtttt                       >  1:4014773/1‑93 (MQ=255)
                                                                       aaaaaGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACttttt                      <  1:5193693/93‑1 (MQ=255)
                                                                        aaaaGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACtttttt                     >  1:4860944/1‑93 (MQ=255)
                                                                        aaaaGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACtttttt                     >  2:337308/1‑93 (MQ=255)
                                                                        aaaaGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACtttttt                     <  1:7334946/93‑1 (MQ=255)
                                                                          aaGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTAt                   <  2:6575423/93‑1 (MQ=255)
                                                                           aGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTAtt                  <  2:4984322/93‑1 (MQ=255)
                                                                              gcgTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTcga               >  1:6188020/1‑93 (MQ=255)
                                                                               cgTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTcgac              >  2:406780/1‑93 (MQ=255)
                                                                                 tCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTcgacga            >  1:5636761/1‑93 (MQ=255)
                                                                                  ccGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCgacgac           <  2:818538/93‑1 (MQ=255)
                                                                                      gagaGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGat       >  1:7109568/1‑93 (MQ=255)
                                                                                       agagCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGata      <  2:5314064/93‑1 (MQ=255)
                                                                                       agagCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGata      <  1:4274674/93‑1 (MQ=255)
                                                                                       agagCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGata      >  1:1492869/1‑93 (MQ=255)
                                                                                        gagCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGatat     <  1:3920682/93‑1 (MQ=255)
                                                                                        gagCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGatat     <  1:5259724/93‑1 (MQ=255)
                                                                                        gagCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGatat     <  1:2664615/93‑1 (MQ=255)
                                                                                         agCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATAtt    <  1:1858700/93‑1 (MQ=255)
                                                                                          gCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATAttt   <  2:2222980/93‑1 (MQ=255)
                                                                                            |                                                                                           
GGCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTG  >  NC_000913/3412520‑3412703

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AGGCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTGCA  >  NC_000913/3412519‑3412705
                                                                                             |                                                                                             
AGGCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCA                                                                                               >  SRR4302542.4921138/1‑94 (MQ=60)
 GGCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGG                                                                                              >  SRR4302542.1247847/1‑94 (MQ=60)
 GGCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAG                                                                                              <  SRR4302542.1076407/94‑1 (MQ=60)
  GCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGG                                                                                             <  SRR4302542.1794585/94‑1 (MQ=60)
   CGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGT                                                                                            >  SRR4302542.4839147/1‑94 (MQ=60)
    GATTGGCGATAAACGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTT                                                                                           <  SRR4302542.1147663/94‑1 (MQ=60)
     ATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTA                                                                                          >  SRR4302542.947141/1‑94 (MQ=60)
     ATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTA                                                                                          >  SRR4302542.4590592/1‑94 (MQ=60)
        GGCGATAAACGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAG                                                                                       <  SRR4302542.2522707/94‑1 (MQ=60)
          CGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCC                                                                                     >  SRR4302542.5208248/1‑94 (MQ=60)
          CGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCC                                                                                     <  SRR4302542.4636565/94‑1 (MQ=60)
          CGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCC                                                                                     >  SRR4302542.4215213/1‑94 (MQ=60)
          CGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCC                                                                                     >  SRR4302542.3420881/1‑94 (MQ=60)
           GATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCA                                                                                    >  SRR4302542.7108111/1‑94 (MQ=60)
           GATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCA                                                                                    <  SRR4302542.6587066/94‑1 (MQ=60)
           GATAAACGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCA                                                                                    <  SRR4302542.968602/94‑1 (MQ=60)
            ATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCAC                                                                                   <  SRR4302542.4692079/94‑1 (MQ=60)
            ATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCAC                                                                                   >  SRR4302542.1665007/1‑94 (MQ=60)
            ATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCAC                                                                                   >  SRR4302542.769291/1‑94 (MQ=60)
            ATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCAC                                                                                   <  SRR4302542.76910/94‑1 (MQ=60)
            ATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCAC                                                                                   >  SRR4302542.4873803/1‑94 (MQ=60)
              AAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTA                                                                                 >  SRR4302542.3678204/1‑94 (MQ=60)
               AATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTAC                                                                                <  SRR4302542.6771061/94‑1 (MQ=60)
               AATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTAC                                                                                <  SRR4302542.4172578/94‑1 (MQ=60)
               AATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTAC                                                                                <  SRR4302542.476647/94‑1 (MQ=60)
               AATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTAC                                                                                <  SRR4302542.1294836/94‑1 (MQ=60)
               AATGGTTGATTACTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTAC                                                                                <  SRR4302542.6296404/94‑1 (MQ=60)
                ATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACC                                                                               <  SRR4302542.5130747/94‑1 (MQ=60)
                ATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACC                                                                               <  SRR4302542.2244706/94‑1 (MQ=60)
                 TGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCG                                                                              <  SRR4302542.3638413/94‑1 (MQ=60)
                 TGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCG                                                                              >  SRR4302542.5494817/1‑94 (MQ=60)
                  GGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGA                                                                             <  SRR4302542.4834469/94‑1 (MQ=60)
                  GGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGA                                                                             >  SRR4302542.204002/1‑94 (MQ=60)
                   GTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGAT                                                                            <  SRR4302542.3562619/94‑1 (MQ=60)
                   GTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGAT                                                                            >  SRR4302542.4804682/1‑94 (MQ=60)
                   GTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGAT                                                                            <  SRR4302542.2492566/94‑1 (MQ=60)
                    TTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATA                                                                           >  SRR4302542.911806/1‑94 (MQ=60)
                       ATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCC                                                                        <  SRR4302542.5183044/94‑1 (MQ=60)
                       ATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCC                                                                        >  SRR4302542.7598722/1‑94 (MQ=60)
                         TAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCC                                                                      <  SRR4302542.3883804/94‑1 (MQ=60)
                         TAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAAAGCGGGTTAAAGCCACTACCGATACCCCC                                                                      <  SRR4302542.2893178/94‑1 (MQ=60)
                           GTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGC                                                                    >  SRR4302542.2792066/1‑94 (MQ=60)
                             GAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAG                                                                  >  SRR4302542.2945507/1‑94 (MQ=60)
                             GAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAG                                                                  >  SRR4302542.4913722/1‑94 (MQ=60)
                              AAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGA                                                                 >  SRR4302542.5426946/1‑94 (MQ=60)
                               AGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGAT                                                                >  SRR4302542.1259390/1‑94 (MQ=60)
                               AGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGAT                                                                <  SRR4302542.4149193/94‑1 (MQ=60)
                               AGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGAT                                                                <  SRR4302542.6146171/94‑1 (MQ=60)
                               AGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGAT                                                                <  SRR4302542.3562838/94‑1 (MQ=60)
                                GGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATA                                                               <  SRR4302542.4339308/94‑1 (MQ=60)
                                GGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATA                                                               >  SRR4302542.3383584/1‑94 (MQ=60)
                                GGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATA                                                               >  SRR4302542.1080618/1‑94 (MQ=60)
                                 GACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATAC                                                              <  SRR4302542.4681405/94‑1 (MQ=60)
                                 GACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATAC                                                              <  SRR4302542.5457523/94‑1 (MQ=60)
                                 GACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATAC                                                              <  SRR4302542.146628/94‑1 (MQ=60)
                                   CTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTG                                                            >  SRR4302542.3193564/1‑94 (MQ=60)
                                   CTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTG                                                            <  SRR4302542.5921061/94‑1 (MQ=60)
                                    TGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGC                                                           >  SRR4302542.1030400/1‑94 (MQ=60)
                                    TGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGC                                                           <  SRR4302542.5197131/94‑1 (MQ=60)
                                    TGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGC                                                           <  SRR4302542.5284947/94‑1 (MQ=60)
                                     GAAATCGGGCGATAAAGTCATTGTCAGCGGCCTGAAAAAAGGGCGTCTGGGAGAGCGGGTTAAAGCCACTCCCGATTCCCCCGCAGATACTGGA                                                          <  SRR4302542.3917671/94‑1 (MQ=60)
                                      AAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCAT                                                         <  SRR4302542.6181086/94‑1 (MQ=60)
                                       AATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATC                                                        <  SRR4302542.1958399/94‑1 (MQ=60)
                                       AATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATC                                                        <  SRR4302542.287679/94‑1 (MQ=60)
                                          CTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAA                                                     <  SRR4302542.5845969/94‑1 (MQ=60)
                                          CTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAA                                                     <  SRR4302542.3708965/94‑1 (MQ=60)
                                          CTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAA                                                     >  SRR4302542.2780682/1‑94 (MQ=60)
                                          CTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCCGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAA                                                     <  SRR4302542.7373153/94‑1 (MQ=60)
                                           TGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAG                                                    <  SRR4302542.2559820/94‑1 (MQ=60)
                                            GGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGT                                                   >  SRR4302542.1131121/1‑94 (MQ=60)
                                            GGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGT                                                   >  SRR4302542.6993139/1‑94 (MQ=60)
                                             GCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTA                                                  <  SRR4302542.4603628/94‑1 (MQ=60)
                                             GCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTA                                                  <  SRR4302542.5180468/94‑1 (MQ=60)
                                             GCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTA                                                  <  SRR4302542.2567920/94‑1 (MQ=60)
                                             GCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTA                                                  <  SRR4302542.274642/94‑1 (MQ=60)
                                              CGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAA                                                 >  SRR4302542.4109503/1‑94 (MQ=60)
                                               GATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAG                                                >  SRR4302542.2667594/1‑94 (MQ=60)
                                               GATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAG                                                <  SRR4302542.4698412/94‑1 (MQ=60)
                                               GATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAG                                                >  SRR4302542.3815650/1‑94 (MQ=60)
                                                ATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGG                                               >  SRR4302542.7440196/1‑94 (MQ=60)
                                                ATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGG                                               <  SRR4302542.5223535/94‑1 (MQ=60)
                                                 TCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGT                                              <  SRR4302542.790902/94‑1 (MQ=60)
                                                  CAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTA                                             >  SRR4302542.7573798/1‑94 (MQ=60)
                                                   AAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAA                                            <  SRR4302542.2576339/94‑1 (MQ=60)
                                                   AAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAA                                            <  SRR4302542.7569162/94‑1 (MQ=60)
                                                   AAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAA                                            >  SRR4302542.748440/1‑94 (MQ=60)
                                                   AAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAA                                            >  SRR4302542.4065900/1‑94 (MQ=60)
                                                   AAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAA                                            >  SRR4302542.2354650/1‑94 (MQ=60)
                                                   AAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAA                                            >  SRR4302542.6162888/1‑94 (MQ=60)
                                                     GTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATC                                          <  SRR4302542.6057693/94‑1 (MQ=60)
                                                      TCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCT                                         >  SRR4302542.2502355/1‑94 (MQ=60)
                                                       CATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTG                                        >  SRR4302542.5162039/1‑94 (MQ=60)
                                                       CATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTG                                        >  SRR4302542.4004851/1‑94 (MQ=60)
                                                        ATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGA                                       <  SRR4302542.1155500/94‑1 (MQ=60)
                                                        ATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGA                                       >  SRR4302542.2378174/1‑94 (MQ=60)
                                                          TGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACA                                     <  SRR4302542.2886514/94‑1 (MQ=60)
                                                           GTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACAT                                    >  SRR4302542.6551238/1‑94 (MQ=60)
                                                           GTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACAT                                    <  SRR4302542.43264/94‑1 (MQ=60)
                                                           GTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACAT                                    >  SRR4302542.5930332/1‑94 (MQ=60)
                                                           GTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACAT                                    <  SRR4302542.931773/94‑1 (MQ=60)
                                                           GTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACAT                                    <  SRR4302542.1074772/94‑1 (MQ=60)
                                                           GTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACAT                                    <  SRR4302542.1074770/94‑1 (MQ=60)
                                                            TCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATG                                   <  SRR4302542.446100/94‑1 (MQ=60)
                                                            TCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATG                                   <  SRR4302542.373643/94‑1 (MQ=60)
                                                               GCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCGCTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCA                                <  SRR4302542.329272/94‑1 (MQ=60)
                                                               GCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCA                                <  SRR4302542.6705494/94‑1 (MQ=60)
                                                               GCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCA                                >  SRR4302542.2568909/1‑94 (MQ=60)
                                                               GCGGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCA                                >  SRR4302542.6929512/1‑94 (MQ=60)
                                                                CGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAA                               <  SRR4302542.5526835/94‑1 (MQ=60)
                                                                 GGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAA                              <  SRR4302542.624895/94‑1 (MQ=60)
                                                                 GGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAA                              >  SRR4302542.3309370/1‑94 (MQ=60)
                                                                 GGCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAA                              >  SRR4302542.4736019/1‑94 (MQ=60)
                                                                  GCCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAAC                             <  SRR4302542.2140688/94‑1 (MQ=60)
                                                                   CCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACT                            <  SRR4302542.896798/94‑1 (MQ=60)
                                                                   CCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACT                            >  SRR4302542.5684322/1‑94 (MQ=60)
                                                                   CCTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACT                            <  SRR4302542.1441606/94‑1 (MQ=60)
                                                                    CTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTT                           >  SRR4302542.4916105/1‑94 (MQ=60)
                                                                    CTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTT                           >  SRR4302542.3644762/1‑94 (MQ=60)
                                                                    CTGCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTT                           >  SRR4302542.6925245/1‑94 (MQ=60)
                                                                      GCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTT                         >  SRR4302542.1739513/1‑94 (MQ=60)
                                                                      GCAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATAGAAGTAAGGTAATCTGACATGGCAAACTTTT                         <  SRR4302542.7122184/94‑1 (MQ=60)
                                                                      GCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTT                         >  SRR4302542.4054402/1‑94 (MQ=60)
                                                                       CAAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTT                        <  SRR4302542.2038770/94‑1 (MQ=60)
                                                                        AAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTT                       <  SRR4302542.7426339/94‑1 (MQ=60)
                                                                        AAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTT                       >  SRR4302542.4908285/1‑94 (MQ=60)
                                                                        AAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTT                       <  SRR4302542.4013272/94‑1 (MQ=60)
                                                                        AAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTT                       <  SRR4302542.5244153/94‑1 (MQ=60)
                                                                        AAAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTT                       <  SRR4302542.1501513/94‑1 (MQ=60)
                                                                        AAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTT                       <  SRR4302542.2064791/94‑1 (MQ=60)
                                                                        AAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTT                       <  SRR4302542.6233257/94‑1 (MQ=60)
                                                                         AAAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTA                      <  SRR4302542.7597189/94‑1 (MQ=60)
                                                                         AAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTA                      <  SRR4302542.7406799/94‑1 (MQ=60)
                                                                          AAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTAT                     >  SRR4302542.3574538/1‑94 (MQ=60)
                                                                          AAAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTAT                     <  SRR4302542.1435709/94‑1 (MQ=60)
                                                                          AAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTAT                     <  SRR4302542.4122267/94‑1 (MQ=60)
                                                                           AAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATT                    >  SRR4302542.1738039/1‑94 (MQ=60)
                                                                           AAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATT                    <  SRR4302542.5292467/94‑1 (MQ=60)
                                                                           AAGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATT                    <  SRR4302542.1115186/94‑1 (MQ=60)
                                                                           AAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATT                    >  SRR4302542.6203178/1‑94 (MQ=60)
                                                                            AGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTC                   >  SRR4302542.3282914/1‑94 (MQ=60)
                                                                            AGCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTC                   >  SRR4302542.5309476/1‑94 (MQ=60)
                                                                             GCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCG                  <  SRR4302542.2139114/94‑1 (MQ=60)
                                                                             GCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCG                  >  SRR4302542.6773407/1‑94 (MQ=60)
                                                                             GCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCG                  <  SRR4302542.6935171/94‑1 (MQ=60)
                                                                             GCGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCG                  <  SRR4302542.2338919/94‑1 (MQ=60)
                                                                              CGCGTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGA                 <  SRR4302542.628767/94‑1 (MQ=60)
                                                                              CGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGA                 >  SRR4302542.6248143/1‑94 (MQ=60)
                                                                                 GTCCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGA              >  SRR4302542.5691491/1‑94 (MQ=60)
                                                                                   CCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACC            >  SRR4302542.4323227/1‑94 (MQ=60)
                                                                                   CCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACC            >  SRR4302542.808569/1‑94 (MQ=60)
                                                                                   CCGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACC            >  SRR4302542.6718244/1‑94 (MQ=60)
                                                                                    CGGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCG           >  SRR4302542.2180000/1‑94 (MQ=60)
                                                                                     GGGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGA          >  SRR4302542.7051624/1‑94 (MQ=60)
                                                                                      GGAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGAT         >  SRR4302542.7179354/1‑94 (MQ=60)
                                                                                      GGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGAT         <  SRR4302542.6897485/94‑1 (MQ=60)
                                                                                       GAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATA        <  SRR4302542.5037802/94‑1 (MQ=60)
                                                                                       GAGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATA        >  SRR4302542.1505777/1‑94 (MQ=60)
                                                                                        AGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATAT       <  SRR4302542.4316727/94‑1 (MQ=60)
                                                                                        AGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATAT       >  SRR4302542.1254449/1‑94 (MQ=60)
                                                                                        AGAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATAT       >  SRR4302542.6510233/1‑94 (MQ=60)
                                                                                         GAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATT      <  SRR4302542.5310836/94‑1 (MQ=60)
                                                                                         GAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATT      <  SRR4302542.3959376/94‑1 (MQ=60)
                                                                                         GAGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATT      <  SRR4302542.2690336/94‑1 (MQ=60)
                                                                                          AGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTT     <  SRR4302542.3812319/94‑1 (MQ=60)
                                                                                          AGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTT     <  SRR4302542.392263/94‑1 (MQ=60)
                                                                                          AGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTT     <  SRR4302542.4964485/94‑1 (MQ=60)
                                                                                          AGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTT     <  SRR4302542.7250479/94‑1 (MQ=60)
                                                                                          AGCGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTT     <  SRR4302542.1874758/94‑1 (MQ=60)
                                                                                           GCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTG    <  SRR4302542.6351403/94‑1 (MQ=60)
                                                                                           GCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTG    >  SRR4302542.6202724/1‑94 (MQ=60)
                                                                                            CGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTGC   >  SRR4302542.496585/1‑94 (MQ=60)
                                                                                            CGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTGC   <  SRR4302542.1172730/94‑1 (MQ=60)
                                                                                            CGGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTGC   >  SRR4302542.6956748/1‑94 (MQ=60)
                                                                                             GGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTGCA  >  SRR4302542.17841/1‑94 (MQ=60)
                                                                                             GGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTGCA  >  SRR4302542.93400/1‑94 (MQ=60)
                                                                                             GGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTGCA  <  SRR4302542.3609653/94‑1 (MQ=60)
                                                                                             AGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTGCA  >  SRR4302542.2592679/1‑94 (MQ=60)
                                                                                             |                                                                                             
AGGCGATTGGCGATAAATGGTTGATTAGTGAAGGACTGAAATCTGGCGATCAAGTCATTGTCAGCGGCCTGCAAAAAGCGCGTCCGGGAGAGCAGGTTAAAGCCACTACCGATACCCCCGCAGATACTGCATCGAAGTAAGGTAATCTGACATGGCAAACTTTTTTATTCGACGACCGATATTTGCA  >  NC_000913/3412519‑3412705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑