Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,446,647 T→C T54A (ACC→GCC)  rplP ← 50S ribosomal subunit protein L16

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,446,6470TC84.9% 729.5 / 111.9 311T54A (ACC→GCC) rplP50S ribosomal subunit protein L16
Reads supporting (aligned to +/- strand):  ref base T (31/16);  new base C (130/134);  total (161/150)
Fisher's exact test for biased strand distribution p-value = 3.97e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 314 total aligned reads displayed.

TTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTAC  >  NC_000913/3446555‑3446739
                                                                                            |                                                                                            
tttaccCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGt                                                                                              <  1:6957366/93‑1 (MQ=255)
   accCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCAt                                                                                           >  1:6534926/1‑93 (MQ=255)
    cccATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATa                                                                                          >  1:7514911/1‑93 (MQ=255)
     ccATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAg                                                                                         >  2:7127653/1‑93 (MQ=255)
     ccATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAg                                                                                         <  1:6836601/93‑1 (MQ=255)
      cATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGc                                                                                        >  2:253530/1‑93 (MQ=255)
      cATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGc                                                                                        <  1:5260827/93‑1 (MQ=255)
       ntACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGNa                                                                                       >  2:5496033/2‑93 (MQ=255)
       aTACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCa                                                                                       >  1:5413832/1‑93 (MQ=255)
       aTACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCa                                                                                       <  2:6214794/93‑1 (MQ=255)
        tACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCac                                                                                      >  1:3149074/1‑93 (MQ=255)
        tACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCac                                                                                      <  1:4972477/93‑1 (MQ=255)
        tACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCac                                                                                      >  1:6090456/1‑93 (MQ=255)
        tACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCac                                                                                      <  2:1487841/93‑1 (MQ=255)
         aCGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCacg                                                                                     >  1:596828/1‑93 (MQ=255)
           gCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCacgac                                                                                   >  2:4743746/1‑93 (MQ=255)
           gCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCacgac                                                                                   >  2:7013735/1‑93 (MQ=255)
               tGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgc                                                                               >  2:2178195/1‑93 (MQ=255)
               tGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgc                                                                               >  1:3480462/1‑93 (MQ=255)
               tGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgc                                                                               >  2:3325310/1‑93 (MQ=255)
               tGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgc                                                                               <  1:3779834/93‑1 (MQ=255)
               tGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgc                                                                               >  2:4198822/1‑93 (MQ=255)
                gCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgct                                                                              <  1:86074/93‑1 (MQ=255)
                  cAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgctgc                                                                            <  2:3933802/93‑1 (MQ=255)
                  cAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGtgctgc                                                                            >  1:404710/1‑93 (MQ=255)
                   aGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTgctgct                                                                           <  2:1719363/93‑1 (MQ=255)
                   aGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTgctgct                                                                           <  2:5294850/93‑1 (MQ=255)
                   aGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTgctgct                                                                           <  2:6786571/93‑1 (MQ=255)
                    gCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCtt                                                                          >  2:7356323/1‑93 (MQ=255)
                    gCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCtt                                                                          >  1:1007248/1‑93 (MQ=255)
                       gCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGa                                                                       >  2:2098206/1‑93 (MQ=255)
                        cTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGAt                                                                      <  1:4713423/93‑1 (MQ=255)
                          tttCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCt                                                                    <  1:4157079/93‑1 (MQ=255)
                            tCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGa                                                                  <  2:2011948/93‑1 (MQ=255)
                            tCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGa                                                                  >  2:3403858/1‑93 (MQ=255)
                             cAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGAc                                                                 <  2:1573148/93‑1 (MQ=255)
                               gTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACgg                                                               <  1:6317232/93‑1 (MQ=255)
                                tGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACggg                                                              >  2:5772622/1‑93 (MQ=255)
                                   tCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAg                                                           >  1:2104054/1‑93 (MQ=255)
                                    cGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGt                                                          <  1:19937/93‑1 (MQ=255)
                                     ggTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTc                                                         >  1:996120/1‑93 (MQ=255)
                                     ggTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTc                                                         <  2:407698/93‑1 (MQ=255)
                                      gTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCa                                                        >  1:3683213/1‑93 (MQ=255)
                                       tttGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAg                                                       <  1:4425197/93‑1 (MQ=255)
                                            ccGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAgacgac                                                  <  2:608387/93‑1 (MQ=255)
                                            ccGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAgacgac                                                  <  1:3920639/93‑1 (MQ=255)
                                              gggAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCa                                                >  2:38083/1‑93 (MQ=255)
                                              gggAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCa                                                >  2:4953333/1‑93 (MQ=255)
                                               ggAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCAc                                               >  2:3898053/1‑93 (MQ=255)
                                               ggAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCAc                                               >  1:1239091/1‑93 (MQ=255)
                                               ggAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCAc                                               >  2:5837061/1‑93 (MQ=255)
                                                gAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACg                                              <  2:4437909/93‑1 (MQ=255)
                                                  acacacGGATCCAGATCTTACCTTGACTCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGc                                            >  2:6414836/1‑93 (MQ=255)
                                                      acGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAAc                                        >  2:181004/1‑93 (MQ=255)
                                                      acGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAAc                                        <  1:2440458/93‑1 (MQ=255)
                                                      acGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAAc                                        <  1:4021505/93‑1 (MQ=255)
                                                       cGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACa                                       <  2:5450387/93‑1 (MQ=255)
                                                          aTCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCt                                    <  2:2238635/93‑1 (MQ=255)
                                                          aTCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCt                                    >  2:6327623/1‑93 (MQ=255)
                                                          aTCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCt                                    <  2:113033/93‑1 (MQ=255)
                                                           tCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCtt                                   >  1:4196465/1‑93 (MQ=255)
                                                            ccAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCttt                                  >  1:1620284/1‑93 (MQ=255)
                                                             cAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTc                                 <  1:7415245/93‑1 (MQ=255)
                                                             cAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTc                                 >  2:7265890/1‑93 (MQ=255)
                                                             cAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTc                                 >  1:5080007/1‑93 (MQ=255)
                                                                aTCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGa                              <  2:5093626/93‑1 (MQ=255)
                                                                 tCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGAc                             >  1:3239458/1‑93 (MQ=255)
                                                                 tCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGAc                             <  1:1691683/93‑1 (MQ=255)
                                                                  cTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGAcc                            >  2:6868813/1‑93 (MQ=255)
                                                                    tACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGa                          <  1:2796423/93‑1 (MQ=255)
                                                                     aCCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGaa                         <  2:4604204/93‑1 (MQ=255)
                                                                      ccTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAg                        <  1:6276534/93‑1 (MQ=255)
                                                                      ccTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAg                        >  1:2606017/1‑93 (MQ=255)
                                                                      ccTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAg                        <  1:1090777/93‑1 (MQ=255)
                                                                      ccTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAg                        <  1:6691779/93‑1 (MQ=255)
                                                                       cTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGc                       >  1:572443/1‑93 (MQ=255)
                                                                       cTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGc                       <  1:431650/93‑1 (MQ=255)
                                                                       cTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGc                       >  2:3994530/1‑93 (MQ=255)
                                                                       cTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGc                       <  1:182432/93‑1 (MQ=255)
                                                                       cTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGc                       <  1:2975940/93‑1 (MQ=255)
                                                                        ttGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCt                      >  1:4827802/1‑93 (MQ=255)
                                                                        ttGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCt                      >  1:2688228/1‑93 (MQ=255)
                                                                          gACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGc                    <  2:4346567/93‑1 (MQ=255)
                                                                            cGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCg                  >  2:1697365/1‑93 (MQ=255)
                                                                            cGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCg                  <  2:2979819/93‑1 (MQ=255)
                                                                             gCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGa                 >  2:6624298/1‑93 (MQ=255)
                                                                              cTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGaa                >  2:3083757/1‑93 (MQ=255)
                                                                              cTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGaa                >  2:3549468/1‑93 (MQ=255)
                                                                              cTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGaa                <  1:3955910/93‑1 (MQ=255)
                                                                              cTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGaa                <  1:1424558/93‑1 (MQ=255)
                                                                                tAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGCCGGCCAGCCACCCCCGCCAAAAAGCTTCCGGACC‑AAGCTGCCGGAGcc             >  2:2636290/1‑92 (MQ=255)
                                                                                    tGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAAc          >  2:5662821/1‑93 (MQ=255)
                                                                                    tGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAAc          <  1:7037042/93‑1 (MQ=255)
                                                                                       aCGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCTGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATc       <  2:3024634/93‑1 (MQ=255)
                                                                                       aCGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATc       >  1:5474434/1‑93 (MQ=255)
                                                                                        cGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATcc      <  1:5151087/93‑1 (MQ=255)
                                                                                        cGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATcc      <  1:5026434/93‑1 (MQ=255)
                                                                                         gggCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCg     >  1:2330411/1‑93 (MQ=255)
                                                                                           gTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTa   <  1:3588521/93‑1 (MQ=255)
                                                                                            tCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTAc  >  2:2876920/1‑93 (MQ=255)
                                                                                            |                                                                                            
TTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTAC  >  NC_000913/3446555‑3446739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTAC  >  NC_000913/3446554‑3446739
                                                                                             |                                                                                            
CTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGT                                                                                              <  SRR4302542.7091254/94‑1 (MQ=60)
CTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGC                                                                                              >  SRR4302542.5660669/1‑94 (MQ=60)
CTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGC                                                                                              >  SRR4302542.5079639/1‑94 (MQ=60)
 TTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTC                                                                                             <  SRR4302542.7025723/94‑1 (MQ=60)
 TTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTC                                                                                             >  SRR4302542.547558/1‑94 (MQ=60)
 TTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCC                                                                                             <  SRR4302542.6178458/94‑1 (MQ=60)
   TACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCAT                                                                                           <  SRR4302542.4426957/94‑1 (MQ=60)
   TACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCAT                                                                                           >  SRR4302542.6599336/1‑94 (MQ=60)
   TACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCAT                                                                                           >  SRR4302542.5447548/1‑94 (MQ=60)
    ACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATA                                                                                          >  SRR4302542.1054983/1‑94 (MQ=60)
    ACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATA                                                                                          >  SRR4302542.7588816/1‑94 (MQ=60)
     CCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAG                                                                                         <  SRR4302542.2485548/94‑1 (MQ=60)
     CCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAG                                                                                         <  SRR4302542.6476639/94‑1 (MQ=60)
     CCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAG                                                                                         <  SRR4302542.6476638/94‑1 (MQ=60)
      CCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGC                                                                                        >  SRR4302542.2891766/1‑94 (MQ=60)
      CCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGC                                                                                        <  SRR4302542.6903779/94‑1 (MQ=60)
       CATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCA                                                                                       <  SRR4302542.5311948/94‑1 (MQ=60)
       CATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCA                                                                                       >  SRR4302542.5466411/1‑94 (MQ=60)
       CATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCA                                                                                       <  SRR4302542.3211441/94‑1 (MQ=60)
       CATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCA                                                                                       <  SRR4302542.5052424/94‑1 (MQ=60)
       CATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCA                                                                                       <  SRR4302542.579343/94‑1 (MQ=60)
        ATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCAC                                                                                      >  SRR4302542.4647073/1‑94 (MQ=60)
        ATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCAC                                                                                      >  SRR4302542.6149417/1‑94 (MQ=60)
        ATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCAC                                                                                      >  SRR4302542.81225/1‑94 (MQ=60)
        ATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCAC                                                                                      >  SRR4302542.3178982/1‑94 (MQ=60)
         TACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACG                                                                                     >  SRR4302542.6364912/1‑94 (MQ=60)
         TACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACG                                                                                     >  SRR4302542.601973/1‑94 (MQ=60)
         TACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACG                                                                                     <  SRR4302542.3945223/94‑1 (MQ=60)
         TACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACG                                                                                     <  SRR4302542.5020752/94‑1 (MQ=60)
         TACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACG                                                                                     <  SRR4302542.981352/94‑1 (MQ=60)
          ACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGA                                                                                    <  SRR4302542.3047747/94‑1 (MQ=60)
           CGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGAC                                                                                   <  SRR4302542.4069349/94‑1 (MQ=60)
           CGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGAC                                                                                   >  SRR4302542.3907355/1‑94 (MQ=60)
           CGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGAC                                                                                   >  SRR4302542.479584/1‑94 (MQ=60)
            GCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACG                                                                                  <  SRR4302542.5969842/94‑1 (MQ=60)
             CACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGT                                                                                 >  SRR4302542.3649325/1‑94 (MQ=60)
             CACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGT                                                                                 >  SRR4302542.1857706/1‑94 (MQ=60)
              ACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTG                                                                                >  SRR4302542.4233578/1‑94 (MQ=60)
              ACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTG                                                                                <  SRR4302542.271466/94‑1 (MQ=60)
               CTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGC                                                                               >  SRR4302542.3144261/1‑94 (MQ=60)
               CTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGC                                                                               >  SRR4302542.5175097/1‑94 (MQ=60)
               CTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGC                                                                               >  SRR4302542.3513034/1‑94 (MQ=60)
               CTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGC                                                                               >  SRR4302542.1159769/1‑94 (MQ=60)
                TGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCT                                                                              <  SRR4302542.3817224/94‑1 (MQ=60)
                 GCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTG                                                                             <  SRR4302542.29369/94‑1 (MQ=60)
                 GCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTG                                                                             <  SRR4302542.86791/94‑1 (MQ=60)
                  CCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGC                                                                            >  SRR4302542.4400076/1‑94 (MQ=60)
                  CCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGC                                                                            >  SRR4302542.4711370/1‑94 (MQ=60)
                  CCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGC                                                                            >  SRR4302542.408203/1‑94 (MQ=60)
                   CAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCT                                                                           >  SRR4302542.2460992/1‑94 (MQ=60)
                   CAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCT                                                                           <  SRR4302542.2533411/94‑1 (MQ=60)
                   CAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCT                                                                           <  SRR4302542.6176138/94‑1 (MQ=60)
                    AGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTT                                                                          >  SRR4302542.1015927/1‑94 (MQ=60)
                      CGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCG                                                                        >  SRR4302542.6376919/1‑94 (MQ=60)
                         CTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATC                                                                     <  SRR4302542.4759381/94‑1 (MQ=60)
                         CTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATC                                                                     >  SRR4302542.425595/1‑94 (MQ=60)
                          TTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCT                                                                    >  SRR4302542.154880/1‑94 (MQ=60)
                           TTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTG                                                                   >  SRR4302542.4120687/1‑94 (MQ=60)
                           TTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTG                                                                   <  SRR4302542.4198004/94‑1 (MQ=60)
                             TCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGAC                                                                 <  SRR4302542.6101524/94‑1 (MQ=60)
                               AGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGG                                                               >  SRR4302542.992958/1‑94 (MQ=60)
                               AGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGG                                                               >  SRR4302542.5117119/1‑94 (MQ=60)
                                GTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGG                                                              <  SRR4302542.6379498/94‑1 (MQ=60)
                                GTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGG                                                              >  SRR4302542.4660763/1‑94 (MQ=60)
                                  GATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCA                                                            >  SRR4302542.2021045/1‑94 (MQ=60)
                                   ATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAG                                                           >  SRR4302542.2122213/1‑94 (MQ=60)
                                   ATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAG                                                           >  SRR4302542.3963908/1‑94 (MQ=60)
                                   ATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAG                                                           <  SRR4302542.5140729/94‑1 (MQ=60)
                                     CGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTC                                                         <  SRR4302542.20104/94‑1 (MQ=60)
                                     CGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTC                                                         >  SRR4302542.5321338/1‑94 (MQ=60)
                                     CGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTC                                                         >  SRR4302542.1004691/1‑94 (MQ=60)
                                      GGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCA                                                        >  SRR4302542.3719375/1‑94 (MQ=60)
                                      GGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCA                                                        <  SRR4302542.2714756/94‑1 (MQ=60)
                                       GTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAG                                                       >  SRR4302542.167407/1‑94 (MQ=60)
                                        TTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGA                                                      <  SRR4302542.7512992/94‑1 (MQ=60)
                                        TTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGA                                                      <  SRR4302542.4468650/94‑1 (MQ=60)
                                         TTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGAC                                                     <  SRR4302542.2195485/94‑1 (MQ=60)
                                          TGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACG                                                    <  SRR4302542.2288227/94‑1 (MQ=60)
                                          TGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACG                                                    <  SRR4302542.179878/94‑1 (MQ=60)
                                             CCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACC                                                 <  SRR4302542.3959332/94‑1 (MQ=60)
                                             CCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACC                                                 <  SRR4302542.4220965/94‑1 (MQ=60)
                                              CGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCA                                                <  SRR4302542.1271485/94‑1 (MQ=60)
                                              CGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCA                                                >  SRR4302542.4883194/1‑94 (MQ=60)
                                               GGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCAC                                               >  SRR4302542.1249738/1‑94 (MQ=60)
                                               GGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCAC                                               <  SRR4302542.1742624/94‑1 (MQ=60)
                                               GGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCAC                                               <  SRR4302542.5039534/94‑1 (MQ=60)
                                                GGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACG                                              <  SRR4302542.3509618/94‑1 (MQ=60)
                                                  AACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGC                                            >  SRR4302542.5512056/1‑94 (MQ=60)
                                                  AACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACAGC                                            >  SRR4302542.1149020/1‑94 (MQ=60)
                                                   ACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCC                                           >  SRR4302542.1593602/1‑94 (MQ=60)
                                                   ACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCC                                           >  SRR4302542.3739590/1‑94 (MQ=60)
                                                     ACACGGATCCAGAACTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAA                                         >  SRR4302542.5013427/1‑94 (MQ=60)
                                                       ACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACA                                       >  SRR4302542.7457642/1‑94 (MQ=60)
                                                       ACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACA                                       <  SRR4302542.2464206/94‑1 (MQ=60)
                                                       ACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACA                                       <  SRR4302542.4061189/94‑1 (MQ=60)
                                                       ACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACA                                       <  SRR4302542.4074414/94‑1 (MQ=60)
                                                         GGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGC                                     >  SRR4302542.3186301/1‑94 (MQ=60)
                                                         GGATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGC                                     >  SRR4302542.3636788/1‑94 (MQ=60)
                                                          GATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCT                                    <  SRR4302542.483870/94‑1 (MQ=60)
                                                           ATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTT                                   >  SRR4302542.5347259/1‑94 (MQ=60)
                                                           ATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTT                                   >  SRR4302542.3618888/1‑94 (MQ=60)
                                                           ATCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTT                                   >  SRR4302542.4237839/1‑94 (MQ=60)
                                                            TCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTT                                  >  SRR4302542.1634281/1‑94 (MQ=60)
                                                            TCCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTT                                  >  SRR4302542.2359987/1‑94 (MQ=60)
                                                             CCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTC                                 >  SRR4302542.3731962/1‑94 (MQ=60)
                                                             CCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTC                                 >  SRR4302542.6759554/1‑94 (MQ=60)
                                                             CCAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTC                                 >  SRR4302542.5129379/1‑94 (MQ=60)
                                                              CAGATCTTGCCTTGACTCTTACCGGCAGGGGCCATAGCACGACGTGCTGCTTCGATCTGGCGGGCAGTCAGACGGCCACGGCCAACAGCTTTCA                                <  SRR4302542.4275590/94‑1 (MQ=60)
                                                              CAGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCA                                <  SRR4302542.7487807/94‑1 (MQ=60)
                                                               AGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAG                               <  SRR4302542.1312466/94‑1 (MQ=60)
                                                               AGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAG                               >  SRR4302542.525776/1‑94 (MQ=60)
                                                               AGATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAG                               >  SRR4302542.3991239/1‑94 (MQ=60)
                                                                GATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGA                              >  SRR4302542.105382/1‑94 (MQ=60)
                                                                 ATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGAC                             >  SRR4302542.3270078/1‑94 (MQ=60)
                                                                 ATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGAC                             >  SRR4302542.6263420/1‑94 (MQ=60)
                                                                 ATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGAC                             <  SRR4302542.7103715/94‑1 (MQ=60)
                                                                 ATCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGAC                             <  SRR4302542.5747178/94‑1 (MQ=60)
                                                                  TCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACC                            <  SRR4302542.2062831/94‑1 (MQ=60)
                                                                  TCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACC                            <  SRR4302542.4189040/94‑1 (MQ=60)
                                                                  TCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACC                            <  SRR4302542.2705878/94‑1 (MQ=60)
                                                                  TCTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACC                            <  SRR4302542.1706328/94‑1 (MQ=60)
                                                                   CTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCG                           >  SRR4302542.3989165/1‑94 (MQ=60)
                                                                   CTTACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCG                           >  SRR4302542.6749439/1‑94 (MQ=60)
                                                                     TACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAA                         <  SRR4302542.2823328/94‑1 (MQ=60)
                                                                     TACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAA                         >  SRR4302542.2015109/1‑94 (MQ=60)
                                                                     TACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAA                         >  SRR4302542.2676261/1‑94 (MQ=60)
                                                                      ACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAG                        <  SRR4302542.3516065/94‑1 (MQ=60)
                                                                      ACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAG                        >  SRR4302542.2631216/1‑94 (MQ=60)
                                                                      ACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAG                        <  SRR4302542.842327/94‑1 (MQ=60)
                                                                      ACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAG                        >  SRR4302542.6970138/1‑94 (MQ=60)
                                                                      ACCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAG                        <  SRR4302542.1955766/94‑1 (MQ=60)
                                                                       CCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGC                       <  SRR4302542.6338395/94‑1 (MQ=60)
                                                                       CCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGC                       >  SRR4302542.577362/1‑94 (MQ=60)
                                                                       CCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGC                       <  SRR4302542.1100124/94‑1 (MQ=60)
                                                                       CCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGC                       <  SRR4302542.3452245/94‑1 (MQ=60)
                                                                       CCTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGC                       <  SRR4302542.6757695/94‑1 (MQ=60)
                                                                        CTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGTAGCT                      <  SRR4302542.7046756/94‑1 (MQ=60)
                                                                        CTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCT                      <  SRR4302542.435386/94‑1 (MQ=60)
                                                                        CTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCT                      <  SRR4302542.3004439/94‑1 (MQ=60)
                                                                        CTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCT                      >  SRR4302542.2714149/1‑94 (MQ=60)
                                                                        CTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCT                      >  SRR4302542.5538995/1‑94 (MQ=60)
                                                                        CTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCT                      >  SRR4302542.805223/1‑94 (MQ=60)
                                                                        CTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCT                      >  SRR4302542.4874845/1‑94 (MQ=60)
                                                                        CTTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCT                      <  SRR4302542.183978/94‑1 (MQ=60)
                                                                         TTGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTG                     <  SRR4302542.694412/94‑1 (MQ=60)
                                                                          TGACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGC                    >  SRR4302542.1683436/1‑94 (MQ=60)
                                                                           GACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCC                   <  SRR4302542.4059812/94‑1 (MQ=60)
                                                                            ACGCTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCG                  >  SRR4302542.5125498/1‑94 (MQ=60)
                                                                               CTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAG               >  SRR4302542.6398906/1‑94 (MQ=60)
                                                                               CTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAG               <  SRR4302542.3994964/94‑1 (MQ=60)
                                                                               CTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAG               <  SRR4302542.1436892/94‑1 (MQ=60)
                                                                               CTTAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAG               <  SRR4302542.7521368/94‑1 (MQ=60)
                                                                                 TAACTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCT             <  SRR4302542.6816609/94‑1 (MQ=60)
                                                                                    CTGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAAC          <  SRR4302542.4014318/94‑1 (MQ=60)
                                                                                     TGCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACA         <  SRR4302542.7106163/94‑1 (MQ=60)
                                                                                      GCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACAT        <  SRR4302542.3141191/94‑1 (MQ=60)
                                                                                      GCACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACAT        >  SRR4302542.7347249/1‑94 (MQ=60)
                                                                                       CACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATC       >  SRR4302542.6089404/1‑94 (MQ=60)
                                                                                       CACGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATC       >  SRR4302542.5527620/1‑94 (MQ=60)
                                                                                         CGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCG     >  SRR4302542.5299837/1‑94 (MQ=60)
                                                                                         CGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCG     <  SRR4302542.5201154/94‑1 (MQ=60)
                                                                                         CGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCG     >  SRR4302542.2350379/1‑94 (MQ=60)
                                                                                         CGGGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCG     <  SRR4302542.5075229/94‑1 (MQ=60)
                                                                                           GGCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTA   >  SRR4302542.5073/1‑94 (MQ=60)
                                                                                            GTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTAC  <  SRR4302542.6741088/94‑1 (MQ=60)
                                                                                            GTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTAC  <  SRR4302542.3621987/94‑1 (MQ=60)
                                                                                            GCCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTAC  <  SRR4302542.921442/94‑1 (MQ=60)
                                                                                             |                                                                                            
CTTTACCCATACGCACTGCCAGCGGCTTTTCAGTGATCGGTTTGTCCGGGAACACACGGATCCAGATCTTACCTTGACGCTTAACTGCACGGGTCATAGCACGACGTGCTGCTTCGATCTGACGGGCAGTCAGACGACCACGGCCAACAGCTTTCAGACCGAAGCTGCCGAAGCTAACATCCGTAC  >  NC_000913/3446554‑3446739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑