Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,719,494 T→C V223A (GTG→GCG)  t150 → IS150 putative transposase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,719,4940TC83.1% 743.1 / 136.2 331V223A (GTG→GCG) t150IS150 putative transposase
Reads supporting (aligned to +/- strand):  ref base T (30/26);  new base C (142/133);  total (172/159)
Fisher's exact test for biased strand distribution p-value = 8.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 344 total aligned reads displayed.

GTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATA  >  NC_000913/3719402‑3719586
                                                                                            |                                                                                            
gTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTgtggt                                                                                              >  1:4739948/1‑93 (MQ=255)
 tATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTgtggtg                                                                                             >  2:3638737/1‑93 (MQ=255)
  aTCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGtggcgg                                                                                            >  1:3344228/1‑93 (MQ=255)
    cGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAg                                                                                          <  1:4434211/93‑1 (MQ=255)
     gTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAgt                                                                                         >  1:6248980/1‑93 (MQ=255)
      tATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAgtg                                                                                        >  2:4153805/1‑93 (MQ=255)
      tATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAgtg                                                                                        >  1:2853525/1‑93 (MQ=255)
      tATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAAAGCTGTGGCGGAgtg                                                                                        >  2:4381749/1‑93 (MQ=255)
       aTGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAgtgt                                                                                       <  2:7019167/93‑1 (MQ=255)
        tGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGtt                                                                                      >  2:2534214/1‑93 (MQ=255)
          agaagaTATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTc                                                                                    <  2:3029590/93‑1 (MQ=255)
           gaagaTATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCt                                                                                   >  2:6843102/1‑93 (MQ=255)
           gaagaTATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCt                                                                                   <  1:6968872/93‑1 (MQ=255)
              gaTATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTg                                                                                >  2:1462175/1‑93 (MQ=255)
              gaTATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTg                                                                                <  2:5448707/93‑1 (MQ=255)
               atatCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTgg                                                                               <  2:2889973/93‑1 (MQ=255)
               atatCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTgg                                                                               <  1:143763/93‑1 (MQ=255)
                tatCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGa                                                                              <  2:3167621/93‑1 (MQ=255)
                 atCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGaa                                                                             <  2:1409014/93‑1 (MQ=255)
                 atCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGaa                                                                             <  2:7510429/93‑1 (MQ=255)
                  tCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAAc                                                                            <  2:4875128/93‑1 (MQ=255)
                  tCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAAc                                                                            <  1:5989244/93‑1 (MQ=255)
                   cAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAAcc                                                                           >  1:4055989/1‑93 (MQ=255)
                    aaaaTATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCt                                                                          >  1:2054329/1‑93 (MQ=255)
                    aaaaTATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCt                                                                          >  1:6816608/1‑93 (MQ=255)
                     aaaTATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCtt                                                                         >  1:1971110/1‑93 (MQ=255)
                     aaaTATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCtt                                                                         <  1:325783/93‑1 (MQ=255)
                        tatCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTaaa                                                                      <  1:5298902/93‑1 (MQ=255)
                          tCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGt                                                                    >  1:4207288/1‑93 (MQ=255)
                           ccTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTc                                                                   >  1:1045523/1‑93 (MQ=255)
                             ttAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCgg                                                                 >  2:2148557/1‑93 (MQ=255)
                             ttAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCgg                                                                 >  2:4279265/1‑93 (MQ=255)
                              tAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGa                                                                <  1:7393593/93‑1 (MQ=255)
                               aaaGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAg                                                               >  2:1840623/1‑93 (MQ=255)
                                 aGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAgtg                                                             >  1:7498840/1‑93 (MQ=255)
                                  gAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAgtgt                                                            >  1:5847466/1‑93 (MQ=255)
                                   aaCATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGtt                                                           >  1:3660567/1‑93 (MQ=255)
                                   aaCATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGtt                                                           <  1:5002229/93‑1 (MQ=255)
                                   aaCATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGtt                                                           <  1:4353751/93‑1 (MQ=255)
                                    aCATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGttt                                                          >  2:3193711/1‑93 (MQ=255)
                                     cATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGtttt                                                         <  1:1791981/93‑1 (MQ=255)
                                     cATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGtttt                                                         >  1:739727/1‑93 (MQ=255)
                                      aTGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGttttt                                                        >  2:3468611/1‑93 (MQ=255)
                                      aTGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGttttt                                                        >  1:6743967/1‑93 (MQ=255)
                                       tGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTa                                                       >  1:3781027/1‑93 (MQ=255)
                                         gTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATc                                                     <  1:1258390/93‑1 (MQ=255)
                                           aTTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCtt                                                   <  2:270361/93‑1 (MQ=255)
                                            ttAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTtg                                                  >  2:523951/1‑93 (MQ=255)
                                             tAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTtga                                                 >  2:6381214/1‑93 (MQ=255)
                                             tAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTtga                                                 <  2:5555080/93‑1 (MQ=255)
                                              aaaCAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTtgat                                                <  2:6722987/93‑1 (MQ=255)
                                              aaaCAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTtgat                                                >  1:5669909/1‑93 (MQ=255)
                                                aCAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTtgatga                                              >  2:6060562/1‑93 (MQ=255)
                                                 cAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAg                                             >  2:7317685/1‑93 (MQ=255)
                                                 cAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAg                                             >  2:634773/1‑93 (MQ=255)
                                                  aaaGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGt                                            <  1:4319559/93‑1 (MQ=255)
                                                   aaGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGtt                                           >  1:5228318/1‑93 (MQ=255)
                                                     gCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCa                                         >  2:1200868/1‑93 (MQ=255)
                                                     gCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCa                                         <  1:736116/93‑1 (MQ=255)
                                                      cATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAg                                        <  1:3891253/93‑1 (MQ=255)
                                                       aTGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGt                                       <  1:805264/93‑1 (MQ=255)
                                                       aTGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGt                                       <  2:5005383/93‑1 (MQ=255)
                                                        tGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTa                                      >  2:1110933/1‑93 (MQ=255)
                                                        tGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTa                                      >  2:3762940/1‑93 (MQ=255)
                                                            cAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAatat                                  >  2:6517658/1‑93 (MQ=255)
                                                            cAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAatat                                  >  1:1186887/1‑93 (MQ=255)
                                                            cAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAatat                                  <  1:558714/93‑1 (MQ=255)
                                                             aGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAAtata                                 <  2:1398898/93‑1 (MQ=255)
                                                             aGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAAtata                                 <  2:1006583/93‑1 (MQ=255)
                                                             aGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAAtata                                 >  1:7124511/1‑93 (MQ=255)
                                                             aGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAAtata                                 <  2:4084943/93‑1 (MQ=255)
                                                              gAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATaa                                <  2:4538939/93‑1 (MQ=255)
                                                              gAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATaa                                <  2:2313380/93‑1 (MQ=255)
                                                              gAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATaa                                <  2:4680379/93‑1 (MQ=255)
                                                              gAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATaa                                <  1:6331926/93‑1 (MQ=255)
                                                              gAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTACAGTAATATaa                                <  1:103747/93‑1 (MQ=255)
                                                               aaaaGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAg                               >  1:5079712/1‑93 (MQ=255)
                                                                aaaGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGc                              >  2:5925685/1‑93 (MQ=255)
                                                                aaaGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGc                              >  2:5336422/1‑93 (MQ=255)
                                                                  aGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGa                            <  2:7396726/93‑1 (MQ=255)
                                                                   ggCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGaa                           >  2:878738/1‑93 (MQ=255)
                                                                    gCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAAc                          <  2:714756/93‑1 (MQ=255)
                                                                    gCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAAc                          <  1:2422155/93‑1 (MQ=255)
                                                                      aaTTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTg                        >  1:6136692/1‑93 (MQ=255)
                                                                        ttGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGaa                      <  1:4030608/93‑1 (MQ=255)
                                                                        ttGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGaa                      <  1:224038/93‑1 (MQ=255)
                                                                         tGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAg                     <  1:2911666/93‑1 (MQ=255)
                                                                           tCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGa                   <  1:46024/93‑1 (MQ=255)
                                                                           tCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGa                   >  1:3437014/1‑93 (MQ=255)
                                                                           tCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGa                   <  2:3933798/93‑1 (MQ=255)
                                                                           tCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGa                   <  1:7307080/93‑1 (MQ=255)
                                                                           tCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGa                   <  1:1015561/93‑1 (MQ=255)
                                                                            cTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGAt                  <  1:485107/93‑1 (MQ=255)
                                                                             tGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATg                 >  1:6540114/1‑93 (MQ=255)
                                                                              ggATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGc                <  1:2726929/93‑1 (MQ=255)
                                                                               gATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCt               <  1:54525/93‑1 (MQ=255)
                                                                               gATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCt               <  2:1744448/93‑1 (MQ=255)
                                                                                        gtggcgGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGaa      <  1:2513163/93‑1 (MQ=255)
                                                                                        gtggcgGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGaa      >  2:4938001/1‑93 (MQ=255)
                                                                                            tggAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAatata  <  1:1601391/93‑1 (MQ=255)
                                                                                            |                                                                                            
GTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATA  >  NC_000913/3719402‑3719586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AGTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATAT  >  NC_000913/3719401‑3719587
                                                                                             |                                                                                             
AGTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGT                                                                                               >  SRR4302542.4786164/1‑94 (MQ=60)
AGTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGC                                                                                               >  SRR4302542.829741/1‑94 (MQ=60)
AGTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGC                                                                                               <  SRR4302542.7511900/94‑1 (MQ=60)
AGTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGC                                                                                               >  SRR4302542.4614669/1‑94 (MQ=60)
AGTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGC                                                                                               >  SRR4302542.1609741/1‑94 (MQ=60)
AGTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAAATGTCTGGATAATGCTGTGGC                                                                                               <  SRR4302542.4227362/94‑1 (MQ=60)
 GTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTG                                                                                              >  SRR4302542.803723/1‑94 (MQ=60)
 GTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCG                                                                                              <  SRR4302542.4235032/94‑1 (MQ=60)
  TATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGG                                                                                             >  SRR4302542.505726/1‑94 (MQ=60)
  TATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGG                                                                                             >  SRR4302542.3375702/1‑94 (MQ=60)
    TCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAG                                                                                           <  SRR4302542.5067424/94‑1 (MQ=60)
     CGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGT                                                                                          <  SRR4302542.1400545/94‑1 (MQ=60)
     CGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGT                                                                                          >  SRR4302542.6310555/1‑94 (MQ=60)
     CGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGT                                                                                          <  SRR4302542.4477740/94‑1 (MQ=60)
      GTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTG                                                                                         >  SRR4302542.5908088/1‑94 (MQ=60)
      GTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTG                                                                                         >  SRR4302542.3747834/1‑94 (MQ=60)
      GTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTG                                                                                         >  SRR4302542.2880945/1‑94 (MQ=60)
      GTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTG                                                                                         <  SRR4302542.7028687/94‑1 (MQ=60)
        ATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTT                                                                                       >  SRR4302542.1397769/1‑94 (MQ=60)
        ATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTT                                                                                       >  SRR4302542.1096503/1‑94 (MQ=60)
          GAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTC                                                                                     <  SRR4302542.2971908/94‑1 (MQ=60)
          GAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTC                                                                                     >  SRR4302542.1681035/1‑94 (MQ=60)
           AGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCT                                                                                    <  SRR4302542.6259159/94‑1 (MQ=60)
           AGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCT                                                                                    >  SRR4302542.6917542/1‑94 (MQ=60)
           AGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCT                                                                                    >  SRR4302542.4808838/1‑94 (MQ=60)
            GAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTT                                                                                   <  SRR4302542.7081287/94‑1 (MQ=60)
            GAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTT                                                                                   <  SRR4302542.7037332/94‑1 (MQ=60)
             AAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTT                                                                                  <  SRR4302542.5599205/94‑1 (MQ=60)
              AGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTG                                                                                 >  SRR4302542.5043844/1‑94 (MQ=60)
               GATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGGATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGG                                                                                >  SRR4302542.7578402/1‑94 (MQ=60)
               GATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGG                                                                                >  SRR4302542.6879389/1‑94 (MQ=60)
               GATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGG                                                                                <  SRR4302542.3818910/94‑1 (MQ=60)
               GATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGG                                                                                >  SRR4302542.3450826/1‑94 (MQ=60)
                ATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGA                                                                               >  SRR4302542.4428575/1‑94 (MQ=60)
                ATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGA                                                                               <  SRR4302542.7327328/94‑1 (MQ=60)
                ATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGA                                                                               >  SRR4302542.7436880/1‑94 (MQ=60)
                ATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGA                                                                               >  SRR4302542.5526759/1‑94 (MQ=60)
                ATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGA                                                                               >  SRR4302542.103406/1‑94 (MQ=60)
                ATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGA                                                                               <  SRR4302542.144962/94‑1 (MQ=60)
                 TATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAA                                                                              >  SRR4302542.4625755/1‑94 (MQ=60)
                   TCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACC                                                                            <  SRR4302542.6047260/94‑1 (MQ=60)
                   TCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACC                                                                            >  SRR4302542.4095985/1‑94 (MQ=60)
                    CAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCT                                                                           >  SRR4302542.2072084/1‑94 (MQ=60)
                    CAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCT                                                                           >  SRR4302542.6883617/1‑94 (MQ=60)
                     AAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTT                                                                          >  SRR4302542.1988142/1‑94 (MQ=60)
                     AAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTT                                                                          >  SRR4302542.3374536/1‑94 (MQ=60)
                      AAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTA                                                                         >  SRR4302542.3863120/1‑94 (MQ=60)
                      AAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTA                                                                         <  SRR4302542.836688/94‑1 (MQ=60)
                      AAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTA                                                                         <  SRR4302542.328612/94‑1 (MQ=60)
                       AATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAA                                                                        >  SRR4302542.6399466/1‑94 (MQ=60)
                        ATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAA                                                                       <  SRR4302542.2931002/94‑1 (MQ=60)
                        ATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAA                                                                       >  SRR4302542.1049259/1‑94 (MQ=60)
                        ATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAA                                                                       >  SRR4302542.6882749/1‑94 (MQ=60)
                         TATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAG                                                                      <  SRR4302542.5350393/94‑1 (MQ=60)
                          ATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGT                                                                     <  SRR4302542.4859159/94‑1 (MQ=60)
                          ATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGT                                                                     >  SRR4302542.4248765/1‑94 (MQ=60)
                          ATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGT                                                                     >  SRR4302542.207509/1‑94 (MQ=60)
                           TCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTC                                                                    <  SRR4302542.104581/94‑1 (MQ=60)
                           TCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTC                                                                    >  SRR4302542.1054496/1‑94 (MQ=60)
                           TCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTC                                                                    <  SRR4302542.4077236/94‑1 (MQ=60)
                              TTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGA                                                                 <  SRR4302542.7594215/94‑1 (MQ=60)
                               TAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAG                                                                <  SRR4302542.7465960/94‑1 (MQ=60)
                               TAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAG                                                                <  SRR4302542.1850841/94‑1 (MQ=60)
                                AAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGT                                                               <  SRR4302542.2865812/94‑1 (MQ=60)
                                AAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGT                                                               <  SRR4302542.2376979/94‑1 (MQ=60)
                                AAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGT                                                               >  SRR4302542.2849137/1‑94 (MQ=60)
                                 AAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTG                                                              >  SRR4302542.7572565/1‑94 (MQ=60)
                                  AGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGT                                                             >  SRR4302542.5904178/1‑94 (MQ=60)
                                   GAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTT                                                            >  SRR4302542.3695076/1‑94 (MQ=60)
                                    AACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTT                                                           <  SRR4302542.4396525/94‑1 (MQ=60)
                                    AACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTT                                                           <  SRR4302542.4382792/94‑1 (MQ=60)
                                    AACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTT                                                           <  SRR4302542.151064/94‑1 (MQ=60)
                                    AACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTT                                                           <  SRR4302542.2619013/94‑1 (MQ=60)
                                    AACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTT                                                           <  SRR4302542.6734553/94‑1 (MQ=60)
                                    AACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTT                                                           <  SRR4302542.5050822/94‑1 (MQ=60)
                                    AACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGGGTTTCTTTGGAACCTTAAAGTCGGAGGGTTT                                                           >  SRR4302542.2444154/1‑94 (MQ=60)
                                     ACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTT                                                          >  SRR4302542.746147/1‑94 (MQ=60)
                                     ACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTT                                                          >  SRR4302542.4072720/1‑94 (MQ=60)
                                      CATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTT                                                         >  SRR4302542.6810333/1‑94 (MQ=60)
                                      CATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTT                                                         <  SRR4302542.4254265/94‑1 (MQ=60)
                                      CATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTT                                                         <  SRR4302542.1807530/94‑1 (MQ=60)
                                       ATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTA                                                        >  SRR4302542.3818431/1‑94 (MQ=60)
                                        TGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTAT                                                       <  SRR4302542.1302797/94‑1 (MQ=60)
                                        TGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTAT                                                       >  SRR4302542.2513063/1‑94 (MQ=60)
                                        TGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTAT                                                       <  SRR4302542.4692524/94‑1 (MQ=60)
                                        TGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTAT                                                       >  SRR4302542.4170753/1‑94 (MQ=60)
                                        TGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTAT                                                       <  SRR4302542.6371733/94‑1 (MQ=60)
                                        TGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTAT                                                       <  SRR4302542.6106105/94‑1 (MQ=60)
                                         GGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATC                                                      >  SRR4302542.361576/1‑94 (MQ=60)
                                          GTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCT                                                     <  SRR4302542.1269209/94‑1 (MQ=60)
                                          GTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCT                                                     <  SRR4302542.4254077/94‑1 (MQ=60)
                                           TATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTT                                                    >  SRR4302542.4095488/1‑94 (MQ=60)
                                           TATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTT                                                    >  SRR4302542.5805775/1‑94 (MQ=60)
                                           TATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTT                                                    >  SRR4302542.5196348/1‑94 (MQ=60)
                                            ATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTG                                                   >  SRR4302542.1560991/1‑94 (MQ=60)
                                            ATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTG                                                   >  SRR4302542.7467900/1‑94 (MQ=60)
                                            ATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTG                                                   <  SRR4302542.998262/94‑1 (MQ=60)
                                              TAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGAT                                                 <  SRR4302542.588223/94‑1 (MQ=60)
                                              TAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGAT                                                 >  SRR4302542.5724979/1‑94 (MQ=60)
                                               AAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATG                                                >  SRR4302542.447226/1‑94 (MQ=60)
                                               AAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATG                                                >  SRR4302542.2914569/1‑94 (MQ=60)
                                                AACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGA                                               >  SRR4302542.1145155/1‑94 (MQ=60)
                                                AACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGA                                               >  SRR4302542.4013729/1‑94 (MQ=60)
                                                 ACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAG                                              <  SRR4302542.6450989/94‑1 (MQ=60)
                                                  CAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGT                                             <  SRR4302542.1896679/94‑1 (MQ=60)
                                                  CAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGT                                             >  SRR4302542.5650581/1‑94 (MQ=60)
                                                  CAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGT                                             <  SRR4302542.5159445/94‑1 (MQ=60)
                                                  CAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGT                                             >  SRR4302542.1697459/1‑94 (MQ=60)
                                                   AAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTT                                            >  SRR4302542.5279165/1‑94 (MQ=60)
                                                   AAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTT                                            <  SRR4302542.4362031/94‑1 (MQ=60)
                                                    AAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTC                                           <  SRR4302542.3607679/94‑1 (MQ=60)
                                                    AAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTC                                           <  SRR4302542.4294406/94‑1 (MQ=60)
                                                    AAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTC                                           >  SRR4302542.7508342/1‑94 (MQ=60)
                                                     AGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCA                                          <  SRR4302542.5478969/94‑1 (MQ=60)
                                                      GCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAG                                         <  SRR4302542.742497/94‑1 (MQ=60)
                                                       CATGTCCAGAAAAGGCAATTGTCTGGATGATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGT                                        >  SRR4302542.6191463/1‑94 (MQ=60)
                                                       CATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGT                                        <  SRR4302542.3929672/94‑1 (MQ=60)
                                                       CATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGGTCAGT                                        >  SRR4302542.1220852/1‑94 (MQ=60)
                                                        ATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTA                                       <  SRR4302542.4492323/94‑1 (MQ=60)
                                                        ATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTA                                       <  SRR4302542.812188/94‑1 (MQ=60)
                                                          GTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAAT                                     >  SRR4302542.3239406/1‑94 (MQ=60)
                                                          GTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAAT                                     >  SRR4302542.7456430/1‑94 (MQ=60)
                                                            CCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATAT                                   <  SRR4302542.1208423/94‑1 (MQ=60)
                                                            CCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATAT                                   >  SRR4302542.1197119/1‑94 (MQ=60)
                                                            CCAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATAT                                   <  SRR4302542.5395566/94‑1 (MQ=60)
                                                             CAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATA                                  >  SRR4302542.6249190/1‑94 (MQ=60)
                                                             CAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATA                                  >  SRR4302542.7194437/1‑94 (MQ=60)
                                                             CAGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATA                                  <  SRR4302542.563526/94‑1 (MQ=60)
                                                              AGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAA                                 >  SRR4302542.5663264/1‑94 (MQ=60)
                                                              AGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAA                                 >  SRR4302542.4878698/1‑94 (MQ=60)
                                                              AGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAA                                 <  SRR4302542.3736796/94‑1 (MQ=60)
                                                              AGAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAA                                 <  SRR4302542.7420491/94‑1 (MQ=60)
                                                               GAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAG                                >  SRR4302542.5129079/1‑94 (MQ=60)
                                                               GAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAG                                <  SRR4302542.6394318/94‑1 (MQ=60)
                                                               GAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAG                                <  SRR4302542.3427547/94‑1 (MQ=60)
                                                               GAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAG                                >  SRR4302542.4899358/1‑94 (MQ=60)
                                                               GAAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTACAGTAATATAAG                                <  SRR4302542.104608/94‑1 (MQ=60)
                                                                AAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGC                               <  SRR4302542.5338419/94‑1 (MQ=60)
                                                                AAAAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGC                               <  SRR4302542.7355838/94‑1 (MQ=60)
                                                                  AAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGA                             >  SRR4302542.3839423/1‑94 (MQ=60)
                                                                  AAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGA                             >  SRR4302542.2053624/1‑94 (MQ=60)
                                                                  AAGGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGA                             >  SRR4302542.6320028/1‑94 (MQ=60)
                                                                    GGCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAAC                           <  SRR4302542.6982552/94‑1 (MQ=60)
                                                                     GCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACT                          <  SRR4302542.2445706/94‑1 (MQ=60)
                                                                     GCAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACT                          <  SRR4302542.2705146/94‑1 (MQ=60)
                                                                      CAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTG                         >  SRR4302542.6196067/1‑94 (MQ=60)
                                                                      CAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTG                         >  SRR4302542.6238462/1‑94 (MQ=60)
                                                                      CAATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTG                         >  SRR4302542.4594206/1‑94 (MQ=60)
                                                                       AATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGA                        >  SRR4302542.6682839/1‑94 (MQ=60)
                                                                        ATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGCGTTCAGTAATATAAGCGAACTGAA                       >  SRR4302542.7416778/1‑94 (MQ=60)
                                                                        ATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAA                       >  SRR4302542.2254282/1‑94 (MQ=60)
                                                                        ATTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAA                       >  SRR4302542.7186785/1‑94 (MQ=60)
                                                                         TTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAG                      <  SRR4302542.4070381/94‑1 (MQ=60)
                                                                         TTGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAG                      <  SRR4302542.225978/94‑1 (MQ=60)
                                                                          TGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGG                     <  SRR4302542.5699374/94‑1 (MQ=60)
                                                                          TGTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGG                     <  SRR4302542.2939596/94‑1 (MQ=60)
                                                                           GTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGA                    >  SRR4302542.3469189/1‑94 (MQ=60)
                                                                           GTCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGA                    <  SRR4302542.7444257/94‑1 (MQ=60)
                                                                            TCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGAT                   <  SRR4302542.1174001/94‑1 (MQ=60)
                                                                            TCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGAT                   <  SRR4302542.46411/94‑1 (MQ=60)
                                                                            TCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGAT                   <  SRR4302542.1051660/94‑1 (MQ=60)
                                                                            TCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGAT                   <  SRR4302542.247509/94‑1 (MQ=60)
                                                                            TCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGAT                   <  SRR4302542.1024308/94‑1 (MQ=60)
                                                                            TCTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGAT                   <  SRR4302542.7378658/94‑1 (MQ=60)
                                                                             CTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATG                  <  SRR4302542.5086199/94‑1 (MQ=60)
                                                                             CTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATG                  <  SRR4302542.489311/94‑1 (MQ=60)
                                                                             CTGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATG                  >  SRR4302542.6604599/1‑94 (MQ=60)
                                                                              TGGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGC                 >  SRR4302542.6675833/1‑94 (MQ=60)
                                                                               GGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCT                <  SRR4302542.2753235/94‑1 (MQ=60)
                                                                               GGATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCT                <  SRR4302542.7239278/94‑1 (MQ=60)
                                                                                GATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTG               <  SRR4302542.54968/94‑1 (MQ=60)
                                                                                GATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTG               >  SRR4302542.2791358/1‑94 (MQ=60)
                                                                                 ATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGT              >  SRR4302542.3316881/1‑94 (MQ=60)
                                                                                 ATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGT              >  SRR4302542.2506055/1‑94 (MQ=60)
                                                                                 ATAATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGT              <  SRR4302542.7467160/94‑1 (MQ=60)
                                                                                   AATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTA            >  SRR4302542.2115962/1‑94 (MQ=60)
                                                                                   AATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTA            >  SRR4302542.2959144/1‑94 (MQ=60)
                                                                                    ATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGTGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTAC           >  SRR4302542.747634/1‑94 (MQ=60)
                                                                                    ATGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTAC           >  SRR4302542.420417/1‑94 (MQ=60)
                                                                                     TGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACG          <  SRR4302542.4386334/94‑1 (MQ=60)
                                                                                     TGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACG          >  SRR4302542.398083/1‑94 (MQ=60)
                                                                                     TGCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACG          >  SRR4302542.5970055/1‑94 (MQ=60)
                                                                                      GCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGG         <  SRR4302542.201462/94‑1 (MQ=60)
                                                                                      GCTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGG         <  SRR4302542.4662373/94‑1 (MQ=60)
                                                                                       CTGTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGA        >  SRR4302542.5495075/1‑94 (MQ=60)
                                                                                         GTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAAT      <  SRR4302542.5963542/94‑1 (MQ=60)
                                                                                         GTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAAT      <  SRR4302542.1799757/94‑1 (MQ=60)
                                                                                         GTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAAT      <  SRR4302542.2537539/94‑1 (MQ=60)
                                                                                         GTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAAT      <  SRR4302542.3574796/94‑1 (MQ=60)
                                                                                         GTGGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAAT      <  SRR4302542.5304737/94‑1 (MQ=60)
                                                                                           GGCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATAT    <  SRR4302542.3551495/94‑1 (MQ=60)
                                                                                            GCGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATA   <  SRR4302542.1603127/94‑1 (MQ=60)
                                                                                             TGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATAT  <  SRR4302542.1615220/94‑1 (MQ=60)
                                                                                             CGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATAT  <  SRR4302542.216938/94‑1 (MQ=60)
                                                                                             CGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATAT  >  SRR4302542.2477439/1‑94 (MQ=60)
                                                                                             CGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATAT  <  SRR4302542.6348848/94‑1 (MQ=60)
                                                                                             CGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATAT  >  SRR4302542.2129018/1‑94 (MQ=60)
                                                                                             |                                                                                             
AGTATCGTATGAGAAGATATCAAAATATCCTTAAAGAACATGGTATTAAACAAAGCATGTCCAGAAAAGGCAATTGTCTGGATAATGCTGTGGTGGAGTGTTTCTTTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATAT  >  NC_000913/3719401‑3719587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑