Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,170,208	T→C	G191G (GGT→GGC)	murB →	UDP‑N‑acetylenolpyruvoylglucosamine reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,170,208	0	T	C	83.6%	727.5 / 127.0	325	G191G (GGT→GGC)	murB	UDP‑N‑acetylenolpyruvoylglucosamine reductase
Reads supporting (aligned to +/- strand): ref base T (23/30); new base C (127/144); total (151/174)
Fisher's exact test for biased strand distribution p-value = 6.55e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.30e-01

Only 100 of 325 total aligned reads displayed.

TATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATCCAA  >  NC_000913/4170118‑4170299

tATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGa                                                                                            >  2:4839227/1‑93 (MQ=255)

tATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGa                                                                                            <  2:631623/93‑1 (MQ=255)

 aTTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGAc                                                                                           <  1:7099693/93‑1 (MQ=255)

  tttttAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACt                                                                                          >  2:384558/1‑93 (MQ=255)

    tttAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTa                                                                                        >  1:4751359/1‑93 (MQ=255)

      tAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAAc                                                                                      <  2:3003507/93‑1 (MQ=255)

        aaCATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTc                                                                                    >  1:2209996/1‑93 (MQ=255)

        aaCATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTc                                                                                    <  1:6632766/93‑1 (MQ=255)

         aCATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCg                                                                                   >  1:2964331/1‑93 (MQ=255)

          cATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGt                                                                                  <  1:3426703/93‑1 (MQ=255)

           aTGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTc                                                                                 >  2:1444185/1‑93 (MQ=255)

           aTGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTc                                                                                 <  1:271430/93‑1 (MQ=255)

           aTGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTc                                                                                 <  2:2604121/93‑1 (MQ=255)

            tGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAACTCGTCt                                                                                <  1:4694280/93‑1 (MQ=255)

            tGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCt                                                                                >  1:1040261/1‑93 (MQ=255)

            tGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCt                                                                                >  1:68006/1‑93 (MQ=255)

              aaTACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑gg                                                                             >  2:6830604/1‑93 (MQ=255)

               aTACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGa                                                                            >  1:805386/1‑93 (MQ=255)

               aTACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGa                                                                            <  2:3650522/93‑1 (MQ=255)

               aTACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGa                                                                            <  2:909704/93‑1 (MQ=255)

                  ccAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATcc                                                                         >  2:5724250/1‑93 (MQ=255)

                   cAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCt                                                                        >  2:2548536/1‑93 (MQ=255)

                     ggACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTac                                                                      >  2:769632/1‑93 (MQ=255)

                     ggACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTac                                                                      >  1:4543909/1‑93 (MQ=255)

                     ggACCGCTTCACTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTac                                                                      <  2:660111/93‑1 (MQ=255)

                        ccGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAACTCGTCT‑GGATCCTacaac                                                                   >  2:2890358/1‑93 (MQ=255)

                          gCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAg                                                                 >  1:4198573/1‑93 (MQ=255)

                           cTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGt                                                                >  1:4125562/1‑93 (MQ=255)

                            ttCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTa                                                               >  1:5192190/1‑93 (MQ=255)

                             tCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTaa                                                              <  2:6285472/93‑1 (MQ=255)

                             tCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTaa                                                              <  2:227497/93‑1 (MQ=255)

                              cGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAAc                                                             <  2:5964798/93‑1 (MQ=255)

                                cTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGc                                                           <  2:4030529/93‑1 (MQ=255)

                                cTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGc                                                           >  2:361928/1‑93 (MQ=255)

                                  aTTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCca                                                         <  2:168530/93‑1 (MQ=255)

                                  aTTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCca                                                         <  2:3263835/93‑1 (MQ=255)

                                  aTTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCca                                                         <  2:418914/93‑1 (MQ=255)

                                   ttGTAGCCGTAGGTCTGTGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCcac                                                        >  1:3616356/1‑93 (MQ=255)

                                   ttGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCcac                                                        <  1:5121674/93‑1 (MQ=255)

                                    tGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCcaca                                                       <  1:383142/93‑1 (MQ=255)

                                    tGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCcaca                                                       <  2:1496371/93‑1 (MQ=255)

                                     gTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAg                                                      <  1:3909816/93‑1 (MQ=255)

                                         ccGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAg                                                  <  1:620822/93‑1 (MQ=255)

                                          cGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGt                                                 >  1:658068/1‑93 (MQ=255)

                                           gTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTa                                                <  1:4844443/93‑1 (MQ=255)

                                           gTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTa                                                >  1:754518/1‑93 (MQ=255)

                                            tAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTAt                                               >  2:3143802/1‑93 (MQ=255)

                                             aGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTAtt                                              <  2:5651385/93‑1 (MQ=255)

                                             aGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTAtt                                              <  2:580218/93‑1 (MQ=255)

                                             aGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGCAtt                                              <  1:6977049/93‑1 (MQ=255)

                                              ggTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTAttt                                             >  2:5335659/1‑93 (MQ=255)

                                              ggTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTAttt                                             >  2:109718/1‑93 (MQ=255)

                                              ggTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTAttt                                             <  1:2168304/93‑1 (MQ=255)

                                                tctgcgtctgcCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTaa                                           <  2:6876938/93‑1 (MQ=255)

                                                 ctgcgtctgcCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAAt                                          >  1:3317142/1‑93 (MQ=255)

                                                  tgcgtctgcCAAAAGAGTGGCAACCTGTACTAACGTATGGGGACTTAACTCGTCT‑GGCTCCTACAACAGTAACGCCACAGCAAGTATTTAATg                                         >  1:1853239/1‑93 (MQ=255)

                                                  tgcgtctgcCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATg                                         <  1:1094973/93‑1 (MQ=255)

                                                  tgcgtctgcCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATg                                         >  2:2079903/1‑93 (MQ=255)

                                                   gcgtctgcCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACGACAGTAACGCCACAGCAAGTATTTAATGc                                        <  1:6001055/93‑1 (MQ=255)

                                                   gcgtctgcCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGc                                        <  2:3947947/93‑1 (MQ=255)

                                                    cgtctgcCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCg                                       <  2:1276386/93‑1 (MQ=255)

                                                    cgtctgcCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCg                                       <  1:2754693/93‑1 (MQ=255)

                                                      tctgcCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGgt                                     <  2:5441862/93‑1 (MQ=255)

                                                      tctgcCAAAAGAGTGGCAACCTGTAATATCGTATGGCGTCTTCTCTTTGAA‑AGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGgt                                     >  2:6938874/1‑93 (MQ=255)

                                                        tgcCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGgtgt                                   >  1:5882009/1‑93 (MQ=255)

                                                        tgcCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGgtgt                                   >  2:4582938/1‑93 (MQ=255)

                                                        tgcCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGgtgt                                   >  2:5211887/1‑93 (MQ=255)

                                                         gcCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGgtgtg                                  >  2:191880/1‑93 (MQ=255)

                                                          ccAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGgtgtgt                                 >  1:2778640/1‑93 (MQ=255)

                                                          ccAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGgtgtgt                                 >  1:3175765/1‑93 (MQ=255)

                                                            aaaaGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCa                               >  2:1176740/1‑93 (MQ=255)

                                                             aaaGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCat                              >  1:2315201/1‑93 (MQ=255)

                                                              aaGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCata                             >  1:5447362/1‑93 (MQ=255)

                                                              aaGAGTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCata                             <  1:7417382/93‑1 (MQ=255)

                                                               agagTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCatat                            >  2:4896767/1‑93 (MQ=255)

                                                                gagTGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATg                           <  1:1509570/93‑1 (MQ=255)

                                                                   tGGCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATgcgc                        >  1:5653532/1‑93 (MQ=255)

                                                                     gCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGcac                      <  2:845438/93‑1 (MQ=255)

                                                                     gCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGcac                      <  1:6060241/93‑1 (MQ=255)

                                                                     gCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGcac                      >  1:7285805/1‑93 (MQ=255)

                                                                     gCAACCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGcac                      <  2:275521/93‑1 (MQ=255)

                                                                        aCCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGcaccac                   >  1:2062626/1‑93 (MQ=255)

                                                                        aCCTGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGcaccac                   <  1:3950042/93‑1 (MQ=255)

                                                                          cTGTACTAACGTATGGCGACTTTACTCGTTTGGGTTCTTACAAAGGAAACCCCCAACAAAGAATTAATTCCGGGGTGTCATATGCGcaccaca                  >  1:2365101/1‑92 (MQ=255)

                                                                           tGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCaa                >  1:4022184/1‑93 (MQ=255)

                                                                           tGTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCaa                >  2:6127531/1‑93 (MQ=255)

                                                                            gTACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCaaa               <  2:7140698/93‑1 (MQ=255)

                                                                             tACTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAAc              >  1:6325598/1‑93 (MQ=255)

                                                                              aCTAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCGCCACCAAACt             <  1:4972681/93‑1 (MQ=255)

                                                                                tAACGTATGGTGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTcc           <  2:3449814/93‑1 (MQ=255)

                                                                                tAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTcc           >  2:5036277/1‑93 (MQ=255)

                                                                                tAACGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTcc           <  1:2876741/93‑1 (MQ=255)

                                                                                   cGTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTg        <  2:7444576/93‑1 (MQ=255)

                                                                                    gTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGa       <  1:1260352/93‑1 (MQ=255)

                                                                                    gTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGa       <  1:2447036/93‑1 (MQ=255)

                                                                                    gTATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGa       >  2:4339908/1‑93 (MQ=255)

                                                                                     tATGGTGAGTTATCGCGTGT‑GGATGCGACCGGAGTAAAGCAACAGCAAGTGTTTACTGGGGTGTGCAATATGCGTTCCACCAAACTCCCTGac      <  1:1957662/93‑2 (MQ=255)

                                                                                     tATGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGAt      >  2:4053862/1‑93 (MQ=255)

                                                                                      aTGGCGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATc     <  2:5571453/93‑1 (MQ=255)

                                                                                         gTGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATCCaa  >  1:266164/1‑93 (MQ=255)

TATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAACTCGTCT‑GGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATCCAA  >  NC_000913/4170118‑4170299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CAGTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATCCAAAA  >  NC_000913/4170115‑4170301

CAGTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGC                                                                                                <  SRR4302542.5416958/94‑1 (MQ=60)

CAGTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGC                                                                                                >  SRR4302542.4354974/1‑94 (MQ=60)

CAGTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGC                                                                                                >  SRR4302542.2987858/1‑94 (MQ=60)

CAGTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGC                                                                                                <  SRR4302542.7333569/94‑1 (MQ=60)

 AGTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCG                                                                                               >  SRR4302542.2409909/1‑94 (MQ=60)

 AGTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCG                                                                                               <  SRR4302542.424769/94‑1 (MQ=60)

 AGTATTTCGACACATGAATACCAGGAGCGCTGCTGTATTGTAGCCGGAGGTCTGCGTCTGCCAAAGGGGTGGCAACCTGTACTAACGTATGGCG                                                                                               <  SRR4302542.870127/94‑1 (MQ=46)

  GTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGA                                                                                              >  SRR4302542.252810/1‑94 (MQ=60)

  GTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGA                                                                                              >  SRR4302542.5155530/1‑94 (MQ=60)

    ATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACT                                                                                            <  SRR4302542.7169343/94‑1 (MQ=60)

    ATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACT                                                                                            >  SRR4302542.6879256/1‑94 (MQ=60)

    ATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACT                                                                                            <  SRR4302542.7487740/94‑1 (MQ=60)

    ATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACT                                                                                            <  SRR4302542.2135775/94‑1 (MQ=60)

     TTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTT                                                                                           >  SRR4302542.2789881/1‑94 (MQ=60)

      TTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTA                                                                                          >  SRR4302542.4797656/1‑94 (MQ=60)

      TTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTA                                                                                          <  SRR4302542.3809826/94‑1 (MQ=60)

       TTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA                                                                                         <  SRR4302542.497588/94‑1 (MQ=60)

        TTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑C                                                                                       <  SRR4302542.2035276/94‑1 (MQ=60)

          AAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTC                                                                                     >  SRR4302542.2229021/1‑94 (MQ=60)

           AACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCG                                                                                    <  SRR4302542.3952139/94‑1 (MQ=60)

           AACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCG                                                                                    <  SRR4302542.3842418/94‑1 (MQ=60)

           AACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCG                                                                                    <  SRR4302542.6698148/94‑1 (MQ=60)

           AACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCG                                                                                    <  SRR4302542.3405311/94‑1 (MQ=60)

           AACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCG                                                                                    >  SRR4302542.2992736/1‑94 (MQ=60)

             CATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTC                                                                                  <  SRR4302542.2053827/94‑1 (MQ=60)

             CATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTC                                                                                  <  SRR4302542.3458795/94‑1 (MQ=60)

              ATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCT                                                                                 >  SRR4302542.68577/1‑94 (MQ=60)

              ATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCT                                                                                 <  SRR4302542.273757/94‑1 (MQ=60)

              ATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCT                                                                                 <  SRR4302542.2812502/94‑1 (MQ=60)

              ATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCT                                                                                 >  SRR4302542.1049194/1‑94 (MQ=60)

              ATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCT                                                                                 >  SRR4302542.5857271/1‑94 (MQ=60)

               TGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTG                                                                                <  SRR4302542.4740112/94‑1 (MQ=60)

               TGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTG                                                                                <  SRR4302542.4740111/94‑1 (MQ=60)

               TGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTG                                                                                >  SRR4302542.1485692/1‑94 (MQ=60)

               TGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTG                                                                                <  SRR4302542.614211/94‑1 (MQ=60)

                GACTACCAGGCCCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGG                                                                               <  SRR4302542.2218198/94‑1 (MQ=60)

                GAATGCCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGG                                                                               <  SRR4302542.2434508/94‑1 (MQ=60)

                 AATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGA                                                                              >  SRR4302542.812312/1‑94 (MQ=60)

                 AATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGA                                                                              <  SRR4302542.4752394/94‑1 (MQ=60)

                 AATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGA                                                                              >  SRR4302542.5965898/1‑94 (MQ=60)

                 AATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGA                                                                              >  SRR4302542.733903/1‑94 (MQ=60)

                  ATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGAT                                                                             >  SRR4302542.4313630/1‑94 (MQ=60)

                    ACCAGGACGGCTTCGCTATCTTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCATCCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCC                                                                           <  SRR4302542.1104271/94‑1 (MQ=60)

                    ACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCC                                                                           >  SRR4302542.2995905/1‑94 (MQ=60)

                     CCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCT                                                                          >  SRR4302542.6702530/1‑94 (MQ=60)

                       AGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTAC                                                                        >  SRR4302542.4588389/1‑94 (MQ=60)

                       AGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTAC                                                                        <  SRR4302542.5446251/94‑1 (MQ=60)

                       AGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTAC                                                                        >  SRR4302542.4854455/1‑94 (MQ=60)

                        GGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACA                                                                       <  SRR4302542.6731177/94‑1 (MQ=60)

                        GGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACA                                                                       <  SRR4302542.3638641/94‑1 (MQ=60)

                         GACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAA                                                                      <  SRR4302542.6558755/94‑1 (MQ=60)

                            CGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAG                                                                   <  SRR4302542.2173020/94‑1 (MQ=60)

                            CGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAG                                                                   >  SRR4302542.4239971/1‑94 (MQ=60)

                            CGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAG                                                                   >  SRR4302542.7408482/1‑94 (MQ=60)

                             GCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGT                                                                  >  SRR4302542.4166203/1‑94 (MQ=60)

                             GCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGT                                                                  >  SRR4302542.5683902/1‑94 (MQ=60)

                              CTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTA                                                                 >  SRR4302542.5242629/1‑94 (MQ=60)

                                TCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAAC                                                               <  SRR4302542.3965338/94‑1 (MQ=60)

                                 CGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACG                                                              >  SRR4302542.6095181/1‑94 (MQ=60)

                                 CGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACG                                                              >  SRR4302542.2958945/1‑94 (MQ=60)

                                  GCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGC                                                             >  SRR4302542.930873/1‑94 (MQ=60)

                                  GCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGC                                                             >  SRR4302542.7012340/1‑94 (MQ=60)

                                   CTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCC                                                            <  SRR4302542.2750783/94‑1 (MQ=60)

                                   CTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCC                                                            >  SRR4302542.6013000/1‑94 (MQ=60)

                                     ATTGTAGCCGTAGGTCTGTGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCAC                                                          >  SRR4302542.3650052/1‑94 (MQ=60)

                                      TTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACA                                                         <  SRR4302542.6166218/94‑1 (MQ=60)

                                      TTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACA                                                         <  SRR4302542.5171410/94‑1 (MQ=60)

                                       TGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAG                                                        <  SRR4302542.7403385/94‑1 (MQ=60)

                                       TGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAG                                                        <  SRR4302542.663812/94‑1 (MQ=60)

                                       TGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAG                                                        <  SRR4302542.6071052/94‑1 (MQ=60)

                                       TGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAG                                                        >  SRR4302542.1578931/1‑94 (MQ=60)

                                       TGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAG                                                        <  SRR4302542.386472/94‑1 (MQ=60)

                                        GTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGC                                                       <  SRR4302542.3948401/94‑1 (MQ=60)

                                         TAGCCGTAGGTCTGCGTCTGCCATAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCA                                                      <  SRR4302542.2734149/94‑1 (MQ=60)

                                         TAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCA                                                      <  SRR4302542.7158876/94‑1 (MQ=60)

                                           GCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAG                                                    <  SRR4302542.117582/94‑1 (MQ=60)

                                           GCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAG                                                    <  SRR4302542.4001214/94‑1 (MQ=60)

                                            CCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGT                                                   <  SRR4302542.626164/94‑1 (MQ=60)

                                            CCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGT                                                   >  SRR4302542.663744/1‑94 (MQ=60)

                                             CGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTA                                                  >  SRR4302542.761047/1‑94 (MQ=60)

                                              GTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTAT                                                 >  SRR4302542.1310256/1‑94 (MQ=60)

                                              GTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTAT                                                 <  SRR4302542.4891616/94‑1 (MQ=60)

                                              GTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTAT                                                 <  SRR4302542.661589/94‑1 (MQ=60)

                                              GTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTAT                                                 >  SRR4302542.4129461/1‑94 (MQ=60)

                                              GTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTAT                                                 <  SRR4302542.3266203/94‑1 (MQ=60)

                                                AGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTT                                               <  SRR4302542.6293414/94‑1 (MQ=60)

                                                AGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGCATTT                                               <  SRR4302542.7045577/94‑1 (MQ=60)

                                                 GGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTA                                              <  SRR4302542.1961831/94‑1 (MQ=60)

                                                 GGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTA                                              <  SRR4302542.2186977/94‑1 (MQ=60)

                                                  GTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAA                                             <  SRR4302542.323503/94‑1 (MQ=60)

                                                  GTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAA                                             >  SRR4302542.5084103/1‑94 (MQ=60)

                                                  GTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAA                                             >  SRR4302542.4656851/1‑94 (MQ=60)

                                                   TCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAAT                                            >  SRR4302542.3348395/1‑94 (MQ=60)

                                                   TCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAAT                                            <  SRR4302542.3440073/94‑1 (MQ=60)

                                                    CTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATG                                           >  SRR4302542.4196004/1‑94 (MQ=60)

                                                    CTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGGGACTTAA‑CTCGTCTGGCTCCTACAACAGTAACGCCACAGCAAGTATTTAATG                                           >  SRR4302542.1869264/1‑94 (MQ=60)

                                                    CTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATG                                           >  SRR4302542.1736656/1‑94 (MQ=60)

                                                    CTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATG                                           >  SRR4302542.6655419/1‑94 (MQ=60)

                                                     TGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGC                                          <  SRR4302542.1104353/94‑1 (MQ=60)

                                                      GCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACGACAGTAACGCCACAGCAAGTATTTAATGCG                                         <  SRR4302542.6059176/94‑1 (MQ=60)

                                                      GCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCG                                         <  SRR4302542.990876/94‑1 (MQ=60)

                                                       CGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGG                                        <  SRR4302542.2781241/94‑1 (MQ=60)

                                                       CGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGG                                        >  SRR4302542.4901828/1‑94 (MQ=60)

                                                       CGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGG                                        <  SRR4302542.2189275/94‑1 (MQ=60)

                                                        GTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGT                                       >  SRR4302542.1913884/1‑94 (MQ=60)

                                                          CTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGT                                     >  SRR4302542.5939033/1‑94 (MQ=60)

                                                          CTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGT                                     >  SRR4302542.5537343/1‑94 (MQ=60)

                                                          CTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGT                                     >  SRR4302542.789511/1‑94 (MQ=60)

                                                           TGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTG                                    <  SRR4302542.2213504/94‑1 (MQ=60)

                                                           TGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTG                                    <  SRR4302542.4189209/94‑1 (MQ=60)

                                                           TGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTG                                    >  SRR4302542.3439881/1‑94 (MQ=60)

                                                           TGCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTG                                    >  SRR4302542.5588267/1‑94 (MQ=60)

                                                            GCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGT                                   >  SRR4302542.2805394/1‑94 (MQ=60)

                                                            GCCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGT                                   >  SRR4302542.3205872/1‑94 (MQ=60)

                                                             CCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTC                                  >  SRR4302542.3085450/1‑94 (MQ=60)

                                                             CCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTC                                  >  SRR4302542.7510389/1‑94 (MQ=60)

                                                             CCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTC                                  >  SRR4302542.4830059/1‑94 (MQ=60)

                                                             CCAAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTAGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTC                                  >  SRR4302542.2726429/1‑94 (MQ=60)

                                                               AAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCAT                                >  SRR4302542.2458431/1‑94 (MQ=60)

                                                               AAAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCAT                                >  SRR4302542.2335065/1‑94 (MQ=60)

                                                                AAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATA                               >  SRR4302542.5500280/1‑94 (MQ=60)

                                                                AAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATA                               <  SRR4302542.3909688/94‑1 (MQ=60)

                                                                AAAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATA                               >  SRR4302542.3630367/1‑94 (MQ=60)

                                                                 AAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATAT                              <  SRR4302542.7489963/94‑1 (MQ=60)

                                                                 AAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATAT                              <  SRR4302542.2575633/94‑1 (MQ=60)

                                                                 AAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATAT                              >  SRR4302542.5226900/1‑94 (MQ=60)

                                                                 AAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATAT                              <  SRR4302542.6301170/94‑1 (MQ=60)

                                                                 AAGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATAT                              <  SRR4302542.4262225/94‑1 (MQ=60)

                                                                  NNAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATG                             <  SRR4302542.2675537/94‑1 (MQ=60)

                                                                  AGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCGTATG                             <  SRR4302542.6214048/94‑1 (MQ=60)

                                                                  AGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATG                             >  SRR4302542.5477566/1‑94 (MQ=60)

                                                                  AGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATG                             <  SRR4302542.3957422/94‑1 (MQ=60)

                                                                  AGAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATG                             <  SRR4302542.4249555/94‑1 (MQ=60)

                                                                   GAGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGC                            <  SRR4302542.1522616/94‑1 (MQ=60)

                                                                    AGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCG                           >  SRR4302542.5849210/1‑94 (MQ=60)

                                                                    AGTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCG                           <  SRR4302542.7090001/94‑1 (MQ=60)

                                                                     GTGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGC                          >  SRR4302542.5708422/1‑94 (MQ=60)

                                                                      TGGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCA                         >  SRR4302542.5197274/1‑94 (MQ=60)

                                                                       GGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCAC                        <  SRR4302542.277506/94‑1 (MQ=60)

                                                                       GGCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCAC                        >  SRR4302542.7357232/1‑94 (MQ=60)

                                                                        GCAACCTGTACTAACGTATGGCGACTTAACCTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCAC                        <  SRR4302542.2384307/94‑1 (MQ=60)

                                                                        GCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACC                       <  SRR4302542.1063729/94‑1 (MQ=60)

                                                                        GCAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACC                       <  SRR4302542.6118898/94‑1 (MQ=60)

                                                                         CAACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCA                      >  SRR4302542.7298643/1‑94 (MQ=60)

                                                                          AACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCAC                     >  SRR4302542.4064558/1‑94 (MQ=60)

                                                                          AACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCAC                     >  SRR4302542.4732280/1‑94 (MQ=60)

                                                                          AACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCAC                     >  SRR4302542.2080451/1‑94 (MQ=60)

                                                                          AACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCAC                     <  SRR4302542.2332620/94‑1 (MQ=60)

                                                                           ACCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACC                    <  SRR4302542.3989044/94‑1 (MQ=60)

                                                                            CCTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCA                   >  SRR4302542.2842486/1‑94 (MQ=60)

                                                                             CTGTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAA                  >  SRR4302542.4061873/1‑94 (MQ=60)

                                                                               GTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAAC                >  SRR4302542.803100/1‑94 (MQ=60)

                                                                               GTACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAAC                >  SRR4302542.6387932/1‑94 (MQ=60)

                                                                                 ACTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCGCCACCAAACTC              <  SRR4302542.5020957/94‑1 (MQ=60)

                                                                                  CTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCC             >  SRR4302542.2802011/1‑94 (MQ=60)

                                                                                  CTAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCC             >  SRR4302542.2809079/1‑94 (MQ=60)

                                                                                   TAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCC            <  SRR4302542.2904361/94‑1 (MQ=60)

                                                                                   TAACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCC            <  SRR4302542.2941328/94‑1 (MQ=60)

                                                                                    AACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCT           <  SRR4302542.4957081/94‑1 (MQ=60)

                                                                                    AACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCT           <  SRR4302542.2240338/94‑1 (MQ=60)

                                                                                     ACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTG          <  SRR4302542.1694715/94‑1 (MQ=60)

                                                                                     ACGTATGGCGACTTAACCTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCT           <  SRR4302542.2366101/94‑1 (MQ=60)

                                                                                     ACGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTG          >  SRR4302542.1118782/1‑94 (MQ=60)

                                                                                      CGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGA         >  SRR4302542.6754457/1‑94 (MQ=60)

                                                                                      CGTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGA         >  SRR4302542.3995463/1‑94 (MQ=60)

                                                                                       GTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGAT        <  SRR4302542.1271191/94‑1 (MQ=60)

                                                                                       GTATGGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGAT        <  SRR4302542.2470849/94‑1 (MQ=60)

                                                                                        TATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATC       <  SRR4302542.3920824/94‑1 (MQ=60)

                                                                                          TGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATCCA     <  SRR4302542.7541746/94‑1 (MQ=60)

                                                                                           GGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATCCAA    >  SRR4302542.268430/1‑94 (MQ=60)

                                                                                           GGCGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATCCAA    <  SRR4302542.5518380/94‑1 (MQ=60)

                                                                                             TGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATCCAAAA  >  SRR4302542.6232751/1‑94 (MQ=60)

CAGTATTTTTAAACATGAATACCAGGACCGCTTCGCTATTGTAGCCGTAGGTCTGCGTCTGCCAAAAGAGTGGCAACCTGTACTAACGTATGGTGACTTAA‑CTCGTCTGGATCCTACAACAGTAACGCCACAGCAAGTATTTAATGCGGTGTGTCATATGCGCACCACCAAACTCCCTGATCCAAAA  >  NC_000913/4170115‑4170301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`