Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,404,526	C→T	L99L (CTG→TTG)	b4179 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,404,526	0	C	T	89.1%	1110.2 / 77.1	357	L99L (CTG→TTG)	b4179	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (15/24); new base T (136/182); total (151/206)
Fisher's exact test for biased strand distribution p-value = 7.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01

Only 100 of 363 total aligned reads displayed.

TGGTCTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGCTG  >  NC_000913/4404434‑4404618

    cTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCg                                                                                          >  2:1556988/1‑93 (MQ=255)

     ttCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCgg                                                                                         <  1:3167181/93‑1 (MQ=255)

       cACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGt                                                                                       <  2:3671959/93‑1 (MQ=255)

       cACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGt                                                                                       >  2:6654254/1‑93 (MQ=255)

       cACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGt                                                                                       <  2:440515/93‑1 (MQ=255)

        aCTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGtt                                                                                      <  2:174092/93‑1 (MQ=255)

        aCTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGtt                                                                                      <  2:6117888/93‑1 (MQ=255)

        aCTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGtt                                                                                      <  1:5498557/93‑1 (MQ=255)

            gtcgtcAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAg                                                                                  <  1:5379067/93‑1 (MQ=255)

            gtcgtcAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAg                                                                                  <  2:2511621/93‑1 (MQ=255)

            gtcgtcAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAg                                                                                  <  1:2999010/93‑1 (MQ=255)

             tcgtcAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAgg                                                                                 <  1:4644739/93‑1 (MQ=255)

             tcgtcAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAgg                                                                                 >  1:1935423/1‑93 (MQ=255)

             tcgtcAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAgg                                                                                 <  2:4133361/93‑1 (MQ=255)

               gtcAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGc                                                                               >  2:7063428/1‑93 (MQ=255)

                tcAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCg                                                                              >  1:1454503/1‑93 (MQ=255)

                 cAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGt                                                                             <  2:225586/93‑1 (MQ=255)

                   gTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTaa                                                                           <  2:5646512/93‑1 (MQ=255)

                    tGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTaaa                                                                          >  2:5759068/1‑93 (MQ=255)

                    tGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTaaa                                                                          >  1:4739059/1‑93 (MQ=255)

                    tGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTaaa                                                                          >  2:2781096/1‑93 (MQ=255)

                       tATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAgat                                                                       >  1:4442172/1‑93 (MQ=255)

                       tATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAgat                                                                       <  2:3359178/93‑1 (MQ=255)

                         tGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAgatga                                                                     >  2:1944755/1‑93 (MQ=255)

                         tGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAgatga                                                                     <  2:2091291/93‑1 (MQ=255)

                          gcgcTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAgatgat                                                                    <  1:5958217/93‑1 (MQ=255)

                            gcTNCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGAttt                                                                  <  1:4832388/93‑1 (MQ=255)

                            gcTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGAttt                                                                  <  2:2600132/93‑1 (MQ=255)

                              tGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGt                                                                <  2:2388366/93‑1 (MQ=255)

                               gCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTa                                                               <  2:4711796/93‑1 (MQ=255)

                               gCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTa                                                               <  1:1831176/93‑1 (MQ=255)

                               gCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTa                                                               <  2:3831666/93‑1 (MQ=255)

                                 cGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTAtc                                                             <  1:846772/93‑1 (MQ=255)

                                 cGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTAtc                                                             >  2:4464571/1‑93 (MQ=255)

                                  ggAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTAtct                                                            >  1:5594606/1‑93 (MQ=255)

                                  ggAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTAtct                                                            >  2:6894717/1‑93 (MQ=255)

                                  ggAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTAtct                                                            >  2:5269210/1‑93 (MQ=255)

                                   gAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTAtctc                                                           <  2:6296482/93‑1 (MQ=255)

                                    aaCGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTAtctct                                                          <  1:6932325/93‑1 (MQ=255)

                                     aCGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTAtctctc                                                         <  2:4948439/93‑1 (MQ=255)

                                     aCGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTAtctctc                                                         >  1:3975577/1‑93 (MQ=255)

                                      cGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTcc                                                        <  2:1361834/93‑1 (MQ=255)

                                      cGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTcc                                                        <  1:1249022/93‑1 (MQ=255)

                                       gCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCa                                                       <  2:5369768/93‑1 (MQ=255)

                                        ccTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAg                                                      >  1:6749732/1‑93 (MQ=255)

                                        ccTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAg                                                      >  2:3520530/1‑93 (MQ=255)

                                          tCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCg                                                    >  1:2433764/1‑93 (MQ=255)

                                           cGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGa                                                   <  2:5507454/93‑1 (MQ=255)

                                             aCCTGGTGAAAGGTACCGTTATTCGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGc                                                 >  1:3579904/1‑93 (MQ=255)

                                              ccTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCa                                                >  2:5029392/1‑93 (MQ=255)

                                              ccTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCa                                                <  2:6230240/93‑1 (MQ=255)

                                               cTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAg                                               >  1:7481394/1‑93 (MQ=255)

                                               cTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAg                                               >  2:3975044/1‑93 (MQ=255)

                                                tGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGa                                              <  2:5135196/93‑1 (MQ=255)

                                                tGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGa                                              >  2:1209928/1‑93 (MQ=255)

                                                tGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGa                                              <  1:2860395/93‑1 (MQ=255)

                                                 ggTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGAt                                             <  2:2967725/93‑1 (MQ=255)

                                                  gTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATg                                            <  1:5669958/93‑1 (MQ=255)

                                                  gTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATg                                            >  2:2166430/1‑93 (MQ=255)

                                                  gTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATg                                            <  1:142005/93‑1 (MQ=255)

                                                    gAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGaa                                          <  1:7073214/93‑1 (MQ=255)

                                                     aaaGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGaaa                                         >  1:6570658/1‑93 (MQ=255)

                                                      aaGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGaaaa                                        <  2:758464/93‑1 (MQ=255)

                                                      aaGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGaaaa                                        <  1:6132413/93‑1 (MQ=255)

                                                      aaGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGaaaa                                        <  1:2494963/93‑1 (MQ=255)

                                                        ggTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAAcc                                      >  2:2890476/1‑93 (MQ=255)

                                                        ggTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAAcc                                      <  1:6401873/93‑1 (MQ=255)

                                                          tACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTg                                    <  2:325488/93‑1 (MQ=255)

                                                           aCCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGc                                   >  2:1406058/1‑93 (MQ=255)

                                                            ccGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCa                                  >  2:1627696/1‑93 (MQ=255)

                                                            ccGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCa                                  <  2:6628617/93‑1 (MQ=255)

                                                            ccGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCa                                  >  1:3345844/1‑93 (MQ=255)

                                                               ttATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTc                               >  2:1303937/1‑93 (MQ=255)

                                                                tATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCa                              <  2:3217921/93‑1 (MQ=255)

                                                                 aTTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCAt                             <  1:3510244/93‑1 (MQ=255)

                                                                 aTTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCAt                             <  1:6532608/93‑1 (MQ=255)

                                                                 aTTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCAt                             <  2:7144954/93‑1 (MQ=255)

                                                                  ttGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATg                            <  2:6543379/93‑1 (MQ=255)

                                                                  ttGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATg                            <  1:6255130/93‑1 (MQ=255)

                                                                     gCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCg                         <  1:1674193/93‑1 (MQ=255)

                                                                      ccACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGa                        >  2:2118473/1‑93 (MQ=255)

                                                                      ccACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGa                        <  1:7201779/93‑1 (MQ=255)

                                                                         ccGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGTATTCATGGCGATCa                     <  2:6437772/93‑1 (MQ=255)

                                                                         ccGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCa                     >  1:1146785/1‑93 (MQ=255)

                                                                         ccGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCa                     <  1:4115003/93‑1 (MQ=255)

                                                                          cGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAg                    <  1:7367948/93‑1 (MQ=255)

                                                                          cGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAg                    >  2:1021294/1‑93 (MQ=255)

                                                                           gTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAgg                   <  1:325886/93‑1 (MQ=255)

                                                                           gTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAgg                   <  1:210099/93‑1 (MQ=255)

                                                                           gTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAgg                   >  2:3437717/1‑93 (MQ=255)

                                                                            tGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGt                  <  1:5133835/93‑1 (MQ=255)

                                                                             gATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTg                 <  2:6142550/93‑1 (MQ=255)

                                                                              aTGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGc                <  2:5068782/93‑1 (MQ=255)

                                                                               tGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCt               <  1:6439673/93‑1 (MQ=255)

                                                                                  cTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGc            >  1:5009369/1‑93 (MQ=255)

                                                                                   tACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCt           <  1:3734295/93‑1 (MQ=255)

                                                                                   tACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCt           >  1:5245741/1‑93 (MQ=255)

                                                                                    aCGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTc          >  1:3909562/1‑93 (MQ=255)

                                                                                      ggCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAg        >  2:3075058/1‑93 (MQ=255)

                                                                                       gCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGc       <  2:477387/93‑1 (MQ=255)

TGGTCTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGCTG  >  NC_000913/4404434‑4404618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGGTCTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGCTGG  >  NC_000913/4404434‑4404619

TGGTCTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCT                                                                                              <  SRR4302542.4233015/94‑1 (MQ=60)

 GGTCTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTG                                                                                             <  SRR4302542.2595196/94‑1 (MQ=60)

   TCTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCG                                                                                           >  SRR4302542.3525108/1‑94 (MQ=60)

    CTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGG                                                                                          <  SRR4302542.1843385/94‑1 (MQ=60)

     TTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGG                                                                                         <  SRR4302542.3197228/94‑1 (MQ=60)

       CACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTT                                                                                       >  SRR4302542.1977675/1‑94 (MQ=60)

        ACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTG                                                                                      >  SRR4302542.1830935/1‑94 (MQ=60)

        ACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTG                                                                                      <  SRR4302542.5551966/94‑1 (MQ=60)

        ACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTG                                                                                      <  SRR4302542.4047582/94‑1 (MQ=60)

        ACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTG                                                                                      >  SRR4302542.4060864/1‑94 (MQ=60)

         CTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGA                                                                                     >  SRR4302542.3904424/1‑94 (MQ=60)

         CTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGA                                                                                     >  SRR4302542.3165649/1‑94 (MQ=60)

         CTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGA                                                                                     >  SRR4302542.3737098/1‑94 (MQ=60)

          TCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAA                                                                                    <  SRR4302542.6402385/94‑1 (MQ=60)

           CGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAG                                                                                   <  SRR4302542.2914076/94‑1 (MQ=60)

           CGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAG                                                                                   <  SRR4302542.687661/94‑1 (MQ=60)

           CGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAG                                                                                   <  SRR4302542.1195201/94‑1 (MQ=60)

            GTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGG                                                                                  >  SRR4302542.967173/1‑94 (MQ=60)

            GTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGG                                                                                  <  SRR4302542.5431328/94‑1 (MQ=60)

            GTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGG                                                                                  <  SRR4302542.3027699/94‑1 (MQ=60)

            GTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGG                                                                                  <  SRR4302542.617493/94‑1 (MQ=60)

            GTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGG                                                                                  >  SRR4302542.1952134/1‑94 (MQ=60)

             gggcgggtcttgtgcgcggccgaacCGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGG                                                                                 <  SRR4302542.324132/69‑1 (MQ=60)

             TCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGG                                                                                 <  SRR4302542.4690156/94‑1 (MQ=60)

             TCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGG                                                                                 >  SRR4302542.3141481/1‑94 (MQ=60)

             TCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGG                                                                                 <  SRR4302542.345371/94‑1 (MQ=60)

              CGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGC                                                                                <  SRR4302542.5914851/94‑1 (MQ=60)

               GTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCG                                                                               <  SRR4302542.5584002/94‑1 (MQ=60)

               GTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCG                                                                               >  SRR4302542.1434967/1‑94 (MQ=60)

               GTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCG                                                                               <  SRR4302542.1450307/94‑1 (MQ=60)

               GTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCG                                                                               >  SRR4302542.1467053/1‑94 (MQ=60)

                 CAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTA                                                                             >  SRR4302542.1978274/1‑94 (MQ=60)

                 CAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTA                                                                             <  SRR4302542.567527/94‑1 (MQ=60)

                  AGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAA                                                                            >  SRR4302542.6605590/1‑94 (MQ=60)

                  AGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAA                                                                            <  SRR4302542.4559231/94‑1 (MQ=60)

                  AGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAA                                                                            >  SRR4302542.4749606/1‑94 (MQ=60)

                  AGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAA                                                                            >  SRR4302542.4762155/1‑94 (MQ=60)

                   GTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAA                                                                           >  SRR4302542.4785265/1‑94 (MQ=60)

                   GTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAA                                                                           >  SRR4302542.2246721/1‑94 (MQ=60)

                    TGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAG                                                                          <  SRR4302542.5062373/94‑1 (MQ=60)

                      CTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGAT                                                                        >  SRR4302542.6776473/1‑94 (MQ=60)

                      CTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGAT                                                                        <  SRR4302542.6723816/94‑1 (MQ=60)

                      CTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGAT                                                                        >  SRR4302542.6554506/1‑94 (MQ=60)

                      CTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGAT                                                                        <  SRR4302542.6495419/94‑1 (MQ=60)

                      CTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGAT                                                                        >  SRR4302542.4485764/1‑94 (MQ=60)

                       TATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATG                                                                       <  SRR4302542.7113623/94‑1 (MQ=60)

                       TATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATG                                                                       <  SRR4302542.5326828/94‑1 (MQ=60)

                       TATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATG                                                                       <  SRR4302542.6428933/94‑1 (MQ=60)

                        ATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGA                                                                      <  SRR4302542.5290040/94‑1 (MQ=60)

                        ATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGA                                                                      >  SRR4302542.2739563/1‑94 (MQ=60)

                        ATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGA                                                                      >  SRR4302542.5525392/1‑94 (MQ=60)

                          GCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATT                                                                    <  SRR4302542.6015912/94‑1 (MQ=60)

                           CGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTT                                                                   <  SRR4302542.3979107/94‑1 (MQ=60)

                           CGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTT                                                                   <  SRR4302542.2821336/94‑1 (MQ=60)

                            GCTNCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTG                                                                  <  SRR4302542.4879466/94‑1 (MQ=60)

                             CTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGT                                                                 <  SRR4302542.478510/94‑1 (MQ=60)

                               GCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTTT                                                               <  SRR4302542.2894011/94‑1 (MQ=60)

                               GCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTAT                                                               <  SRR4302542.1847034/94‑1 (MQ=60)

                                 CGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCT                                                             >  SRR4302542.5648964/1‑94 (MQ=60)

                                 CGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCT                                                             <  SRR4302542.854071/94‑1 (MQ=60)

                                 CGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCT                                                             >  SRR4302542.5138216/1‑94 (MQ=60)

                                 CGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCT                                                             <  SRR4302542.5114724/94‑1 (MQ=60)

                                    AACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTC                                                          >  SRR4302542.4014803/1‑94 (MQ=60)

                                    AACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTC                                                          <  SRR4302542.7000389/94‑1 (MQ=60)

                                    AACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTC                                                          <  SRR4302542.1991137/94‑1 (MQ=60)

                                     ACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCC                                                         >  SRR4302542.35985/1‑94 (MQ=60)

                                      CGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCA                                                        <  SRR4302542.1259762/94‑1 (MQ=60)

                                       GCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAG                                                       <  SRR4302542.6489870/94‑1 (MQ=60)

                                       GCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAG                                                       >  SRR4302542.1750057/1‑94 (MQ=60)

                                       GCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAG                                                       <  SRR4302542.3507105/94‑1 (MQ=60)

                                       GCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAG                                                       >  SRR4302542.6816143/1‑94 (MQ=60)

                                       GCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAG                                                       >  SRR4302542.699378/1‑94 (MQ=60)

                                        CCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGC                                                      <  SRR4302542.449973/94‑1 (MQ=60)

                                        CCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGC                                                      <  SRR4302542.3212143/94‑1 (MQ=60)

                                         CTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCG                                                     >  SRR4302542.7269358/1‑94 (MQ=60)

                                         CTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCG                                                     >  SRR4302542.5397100/1‑94 (MQ=60)

                                         CTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCG                                                     >  SRR4302542.2457447/1‑94 (MQ=60)

                                           CGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAG                                                   >  SRR4302542.1938872/1‑94 (MQ=60)

                                           CGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAG                                                   >  SRR4302542.3308637/1‑94 (MQ=60)

                                           CGACCTGGTGAAAGGGACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAG                                                   >  SRR4302542.4404481/1‑94 (MQ=60)

                                            GACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGC                                                  >  SRR4302542.3251700/1‑94 (MQ=60)

                                            GACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGC                                                  >  SRR4302542.578137/1‑94 (MQ=60)

                                            GACCTGGTGAAAGGTACCGTTATTCGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGC                                                  >  SRR4302542.3613311/1‑94 (MQ=60)

                                             ACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCA                                                 >  SRR4302542.3902070/1‑94 (MQ=60)

                                             ACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCA                                                 <  SRR4302542.1523729/94‑1 (MQ=60)

                                              CCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAG                                                >  SRR4302542.7554736/1‑94 (MQ=60)

                                              CCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAG                                                >  SRR4302542.4094185/1‑94 (MQ=60)

                                              CCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAG                                                <  SRR4302542.2241403/94‑1 (MQ=60)

                                              CCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAG                                                >  SRR4302542.1261770/1‑94 (MQ=60)

                                                TGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGAT                                              <  SRR4302542.40053/94‑1 (MQ=60)

                                                TGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGAT                                              <  SRR4302542.2887875/94‑1 (MQ=60)

                                                  GTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGA                                            <  SRR4302542.5725028/94‑1 (MQ=60)

                                                  GTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGA                                            <  SRR4302542.3356198/94‑1 (MQ=60)

                                                  GTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGA                                            <  SRR4302542.3236477/94‑1 (MQ=60)

                                                  GTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGA                                            <  SRR4302542.143191/94‑1 (MQ=60)

                                                  GTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGA                                            >  SRR4302542.4482330/1‑94 (MQ=60)

                                                   TGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAATGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAA                                           <  SRR4302542.7582401/94‑1 (MQ=60)

                                                   TGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAA                                           >  SRR4302542.6632185/1‑94 (MQ=60)

                                                   TGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAA                                           >  SRR4302542.6879056/1‑94 (MQ=60)

                                                    GAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAA                                          >  SRR4302542.627785/1‑94 (MQ=60)

                                                    GAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAA                                          >  SRR4302542.6635408/1‑94 (MQ=60)

                                                    GAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAA                                          <  SRR4302542.7142629/94‑1 (MQ=60)

                                                     AAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAGGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAA                                         >  SRR4302542.7369967/1‑94 (MQ=60)

                                                      AAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAAC                                        >  SRR4302542.6570643/1‑94 (MQ=60)

                                                      AAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAAC                                        <  SRR4302542.2519161/94‑1 (MQ=60)

                                                      AAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAAC                                        <  SRR4302542.6191738/94‑1 (MQ=60)

                                                       AGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACC                                       >  SRR4302542.5565765/1‑94 (MQ=60)

                                                       AGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACC                                       >  SRR4302542.249021/1‑94 (MQ=60)

                                                        GGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCT                                      <  SRR4302542.4826081/94‑1 (MQ=60)

                                                        GGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCT                                      <  SRR4302542.1233910/94‑1 (MQ=60)

                                                        GGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCT                                      <  SRR4302542.6464955/94‑1 (MQ=60)

                                                         GTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTG                                     <  SRR4302542.1852653/94‑1 (MQ=60)

                                                         GTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTG                                     <  SRR4302542.6903157/94‑1 (MQ=60)

                                                         GTACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTG                                     <  SRR4302542.7510256/94‑1 (MQ=60)

                                                          TACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGC                                    >  SRR4302542.5996265/1‑94 (MQ=60)

                                                           ACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCA                                   >  SRR4302542.3377336/1‑94 (MQ=60)

                                                           ACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCA                                   <  SRR4302542.5550687/94‑1 (MQ=60)

                                                           ACCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCA                                   >  SRR4302542.5679950/1‑94 (MQ=60)

                                                            CCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCAT                                  >  SRR4302542.3641250/1‑94 (MQ=60)

                                                            CCGTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCAT                                  >  SRR4302542.814481/1‑94 (MQ=60)

                                                            CCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCAT                                  <  SRR4302542.1597037/94‑1 (MQ=60)

                                                              GTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTC                                >  SRR4302542.7590710/1‑94 (MQ=60)

                                                              GTTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTC                                >  SRR4302542.376833/1‑94 (MQ=60)

                                                               TTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCA                               >  SRR4302542.7192417/1‑94 (MQ=60)

                                                               TTATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCA                               >  SRR4302542.7171956/1‑94 (MQ=60)

                                                                TATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCAT                              <  SRR4302542.4815874/94‑1 (MQ=60)

                                                                TATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCAT                              <  SRR4302542.2463686/94‑1 (MQ=60)

                                                                TATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCAT                              <  SRR4302542.2405089/94‑1 (MQ=60)

                                                                 ATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATG                             <  SRR4302542.5193335/94‑1 (MQ=60)

                                                                 ATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATG                             <  SRR4302542.6596994/94‑1 (MQ=60)

                                                                 ATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATG                             <  SRR4302542.3543060/94‑1 (MQ=60)

                                                                 ATTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATG                             >  SRR4302542.7527890/1‑94 (MQ=60)

                                                                  TTGGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGG                            <  SRR4302542.6316762/94‑1 (MQ=60)

                                                                    GGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCG                          <  SRR4302542.6300902/94‑1 (MQ=60)

                                                                    GGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCG                          <  SRR4302542.3603144/94‑1 (MQ=60)

                                                                    GGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCG                          <  SRR4302542.5466128/94‑1 (MQ=60)

                                                                    GGCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCG                          >  SRR4302542.4940595/1‑94 (MQ=60)

                                                                     GCCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGA                         <  SRR4302542.1688661/94‑1 (MQ=60)

                                                                      CCACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGAT                        <  SRR4302542.7272458/94‑1 (MQ=60)

                                                                       CACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATC                       <  SRR4302542.1384311/94‑1 (MQ=60)

                                                                       CACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATC                       >  SRR4302542.4969955/1‑94 (MQ=60)

                                                                       CACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATC                       >  SRR4302542.5197613/1‑94 (MQ=60)

                                                                        ACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCA                      >  SRR4302542.7279872/1‑94 (MQ=60)

                                                                        ACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCA                      >  SRR4302542.1156606/1‑94 (MQ=60)

                                                                        ACCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCA                      >  SRR4302542.3124301/1‑94 (MQ=60)

                                                                        ACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCA                      <  SRR4302542.1409720/94‑1 (MQ=60)

                                                                         CCGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAG                     <  SRR4302542.4155549/94‑1 (MQ=60)

                                                                          CGTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGG                    <  SRR4302542.7440107/94‑1 (MQ=60)

                                                                           GTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGT                   <  SRR4302542.211911/94‑1 (MQ=60)

                                                                           GTGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGT                   <  SRR4302542.328719/94‑1 (MQ=60)

                                                                            TGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTG                  <  SRR4302542.5702832/94‑1 (MQ=60)

                                                                            TGATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTG                  <  SRR4302542.5183740/94‑1 (MQ=60)

                                                                              ATGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCT                >  SRR4302542.1621274/1‑94 (MQ=60)

                                                                              ATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCT                >  SRR4302542.4694438/1‑94 (MQ=60)

                                                                               TGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTG               <  SRR4302542.6503104/94‑1 (MQ=60)

                                                                               TGGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTG               <  SRR4302542.7350212/94‑1 (MQ=60)

                                                                                GGCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGG              <  SRR4302542.610768/94‑1 (MQ=60)

                                                                                 GCTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGC             >  SRR4302542.5058023/1‑94 (MQ=60)

                                                                                  CTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCT            <  SRR4302542.3613253/94‑1 (MQ=60)

                                                                                  CTACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCT            >  SRR4302542.5296731/1‑94 (MQ=60)

                                                                                   TACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTC           <  SRR4302542.3771269/94‑1 (MQ=60)

                                                                                   TACGGCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTC           >  SRR4302542.3948144/1‑94 (MQ=60)

                                                                                       GCTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCC       <  SRR4302542.6193408/94‑1 (MQ=60)

                                                                                       GCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCC       <  SRR4302542.6528041/94‑1 (MQ=60)

                                                                                       GCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCC       <  SRR4302542.6811056/94‑1 (MQ=60)

                                                                                        CTTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCG      >  SRR4302542.905935/1‑94 (MQ=60)

                                                                                         TTTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGC     <  SRR4302542.6416155/94‑1 (MQ=60)

                                                                                          TTTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGCT    <  SRR4302542.2386298/94‑1 (MQ=60)

                                                                                           TTTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGCTG   <  SRR4302542.3208756/94‑1 (MQ=60)

                                                                                            TTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGCTGG  <  SRR4302542.5249919/94‑1 (MQ=60)

                                                                                            TTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGCTGG  <  SRR4302542.2738917/94‑1 (MQ=60)

                                                                                            CTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGCTGG  <  SRR4302542.2720496/94‑1 (MQ=60)

TGGTCTTCACTCGTCGTCAGTGCTATGCGCTGCCGGAACGCCTCGACCTGGTGAAAGGTACCGTTATTGGCCACCGTGATGGCTACGGCTTTCTGCGGGTTGAAGGGCGTAAAGATGATTTGTATCTCTCCAGCGAGCAGATGAAAACCTGCATTCATGGCGATCAGGTGCTGGCTCAGCCGCTGG  >  NC_000913/4404434‑4404619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`