Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1061 294.1 15065038 98.6% 14854127 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,506,550 T→C C9R (TGT→CGT)  b4285 → putative transposase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,506,5500TC84.9% 747.9 / 111.1 318C9R (TGT→CGT) b4285putative transposase
Reads supporting (aligned to +/- strand):  ref base T (26/22);  new base C (148/122);  total (174/144)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 324 total aligned reads displayed.

CTGACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACAT  >  NC_000913/4506458‑4506642
                                                                                            |                                                                                            
  gACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAgcgt                                                                                            <  2:450099/93‑1 (MQ=255)
   aCAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTc                                                                                           <  1:5164035/93‑1 (MQ=255)
     aGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCg                                                                                         >  1:5947436/1‑93 (MQ=255)
      gCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGt                                                                                        >  1:1861024/1‑93 (MQ=255)
        ttCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTa                                                                                      >  1:6881758/1‑93 (MQ=255)
        ttCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTa                                                                                      >  2:12012/1‑93 (MQ=255)
        ttCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTa                                                                                      >  2:4636194/1‑93 (MQ=255)
          cGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTaaa                                                                                    <  1:1951977/93‑1 (MQ=255)
            gCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACt                                                                                  >  2:3837051/1‑93 (MQ=255)
            gCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACt                                                                                  >  2:2545550/1‑93 (MQ=255)
             cTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTc                                                                                 >  1:4466174/1‑93 (MQ=255)
              tttGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCa                                                                                <  2:885130/93‑1 (MQ=255)
              tttGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCa                                                                                >  1:389422/1‑93 (MQ=255)
               ttGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAg                                                                               <  2:5576228/93‑1 (MQ=255)
               ttGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAg                                                                               >  1:3564296/1‑93 (MQ=255)
               ttGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAg                                                                               <  1:7117043/93‑1 (MQ=255)
                tGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAgg                                                                              >  1:1024080/1‑93 (MQ=255)
                tGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAgg                                                                              <  2:809295/93‑1 (MQ=255)
                 gAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGc                                                                             <  2:7342115/93‑1 (MQ=255)
                 gAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGc                                                                             <  2:6691981/93‑1 (MQ=255)
                   aCTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTa                                                                           <  1:7490108/93‑1 (MQ=255)
                   aCTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTa                                                                           >  1:5714128/1‑93 (MQ=255)
                    cTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTAc                                                                          <  2:4980899/93‑1 (MQ=255)
                    cTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTAc                                                                          >  2:7201447/1‑93 (MQ=255)
                     tttttAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTAcc                                                                         >  2:1508356/1‑93 (MQ=255)
                     tttttAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTAcc                                                                         >  1:3701942/1‑93 (MQ=255)
                     tttttAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTAcc                                                                         >  1:2568642/1‑93 (MQ=255)
                        ttAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCa                                                                      <  2:6190214/93‑1 (MQ=255)
                        ttAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCa                                                                      <  1:4769025/93‑1 (MQ=255)
                         tAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAg                                                                     >  2:1114625/1‑93 (MQ=255)
                          agagTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAgg                                                                    <  1:133196/93‑1 (MQ=255)
                           gagTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGa                                                                   >  1:33185/1‑93 (MQ=255)
                              tAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGaaaa                                                                >  2:3690791/1‑93 (MQ=255)
                               aaCGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGaaaaa                                                               <  2:2271528/93‑1 (MQ=255)
                                 cGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAAcc                                                             >  2:4908521/1‑93 (MQ=255)
                                   ttGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGt                                                           >  1:3775731/1‑93 (MQ=255)
                                   ttGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGt                                                           >  2:5709006/1‑93 (MQ=255)
                                   ttGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGt                                                           >  2:2979522/1‑93 (MQ=255)
                                   ttGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGt                                                           <  2:2773419/93‑1 (MQ=255)
                                   ttGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGt                                                           >  2:2057431/1‑93 (MQ=255)
                                    tGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTc                                                          <  1:656481/93‑1 (MQ=255)
                                    tGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGCAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTc                                                          <  1:6221670/93‑1 (MQ=255)
                                     gggTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTcc                                                         >  1:1717829/1‑93 (MQ=255)
                                      ggTTTTTCTGCTCATTAATAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCt                                                        <  1:3021247/93‑1 (MQ=255)
                                        tttttCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGa                                                      >  2:6754129/1‑93 (MQ=255)
                                        tttttCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGa                                                      >  2:4470498/1‑93 (MQ=255)
                                         ttttCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGaa                                                     >  1:2204303/1‑93 (MQ=255)
                                           ttCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGaaaa                                                   <  1:2872299/93‑1 (MQ=255)
                                            tCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGGAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGaaaaa                                                  >  1:5909357/1‑93 (MQ=255)
                                            tCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGaaaaa                                                  >  1:4960946/1‑93 (MQ=255)
                                             cTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAAc                                                 >  1:7034066/1‑93 (MQ=255)
                                              tGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAAcc                                                >  1:2945409/1‑93 (MQ=255)
                                               gNTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAAccn                                               <  2:4237910/93‑2 (MQ=255)
                                               gCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACca                                               >  1:2635490/1‑93 (MQ=255)
                                               gCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACca                                               >  1:674311/1‑93 (MQ=255)
                                               gCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACca                                               >  2:1422888/1‑93 (MQ=255)
                                                cTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcag                                              >  2:6523028/1‑93 (MQ=255)
                                                 tCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcaga                                             <  1:7337333/93‑1 (MQ=255)
                                                  cATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagac                                            <  2:6862746/93‑1 (MQ=255)
                                                  cATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagac                                            <  2:6633589/93‑1 (MQ=255)
                                                  cATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagac                                            <  1:928807/93‑1 (MQ=255)
                                                  cATTATTAGCTCCTTCTGACGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagac                                            <  1:6122563/93‑1 (MQ=255)
                                                    ttattaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacgg                                          >  1:6208766/1‑93 (MQ=255)
                                                     tattaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggc                                         >  2:360711/1‑93 (MQ=255)
                                                     tattaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggc                                         <  2:3234068/93‑1 (MQ=255)
                                                     tattaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggc                                         <  1:1539338/93‑1 (MQ=255)
                                                      attaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggca                                        >  1:3458056/1‑93 (MQ=255)
                                                       ttaGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcag                                       >  1:5296284/1‑93 (MQ=255)
                                                        taGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcaga                                      <  2:5899980/93‑1 (MQ=255)
                                                        taGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcaga                                      <  2:7023708/93‑1 (MQ=255)
                                                         aGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagac                                     <  2:2377278/93‑1 (MQ=255)
                                                          gCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagacg                                    <  1:1381436/93‑1 (MQ=255)
                                                          gCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagacg                                    >  1:5402168/1‑93 (MQ=255)
                                                          gCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagacg                                    <  2:1001709/93‑1 (MQ=255)
                                                           cTCGTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagacgg                                   >  1:6976246/1‑93 (MQ=255)
                                                           cTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACcagacggcagacgg                                   <  2:5227190/93‑1 (MQ=255)
                                                               ttCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTg                               >  2:4039148/1‑93 (MQ=255)
                                                               ttCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTg                               >  1:5457657/1‑93 (MQ=255)
                                                               ttCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTg                               <  1:641871/93‑1 (MQ=255)
                                                                  tGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTAt                            <  1:210784/93‑1 (MQ=255)
                                                                  tGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTAt                            >  1:6629288/1‑93 (MQ=255)
                                                                  tGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTAt                            >  1:4246005/1‑93 (MQ=255)
                                                                     tGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTAc                         >  2:5814202/1‑93 (MQ=255)
                                                                      gCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACg                        >  1:2474995/1‑93 (MQ=255)
                                                                       ccATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGc                       <  2:4387909/93‑1 (MQ=255)
                                                                       ccATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGc                       <  1:3243329/93‑1 (MQ=255)
                                                                       ccATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGc                       >  2:7486750/1‑93 (MQ=255)
                                                                         aTTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAg                     >  2:5792805/1‑93 (MQ=255)
                                                                         aTTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAg                     >  2:3516789/1‑93 (MQ=255)
                                                                          ttCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCCGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGt                    >  2:4775459/1‑93 (MQ=255)
                                                                          ttCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGt                    >  2:6036188/1‑93 (MQ=255)
                                                                          ttCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGt                    >  1:3036402/1‑93 (MQ=255)
                                                                          ttCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGt                    >  1:3846421/1‑93 (MQ=255)
                                                                          ttCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGt                    >  1:845274/1‑93 (MQ=255)
                                                                            cTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCa                  <  2:633610/93‑1 (MQ=255)
                                                                             tATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAg                 >  1:6078723/1‑93 (MQ=255)
                                                                              aTTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAgg                <  1:2367803/93‑1 (MQ=255)
                                                                                   aggaaggaGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACtt           <  1:5790458/93‑1 (MQ=255)
                                                                                    ggaaggaGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTg          >  2:5959412/1‑93 (MQ=255)
                                                                                          aGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTAc    <  1:4688461/93‑1 (MQ=255)
                                                                                            |                                                                                            
CTGACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACAT  >  NC_000913/4506458‑4506642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTGACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACATG  >  NC_000913/4506458‑4506643
                                                                                             |                                                                                             
CTGACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTG                                                                                              <  SRR4302542.4133977/94‑1 (MQ=60)
CTGACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTG                                                                                              >  SRR4302542.3561497/1‑94 (MQ=60)
CTGACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCG                                                                                              >  SRR4302542.4235451/1‑94 (MQ=60)
CTGACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCG                                                                                              <  SRR4302542.240931/94‑1 (MQ=60)
 TGACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGT                                                                                             >  SRR4302542.6444704/1‑94 (MQ=60)
   ACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCC                                                                                           <  SRR4302542.291307/94‑1 (MQ=60)
   ACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCC                                                                                           <  SRR4302542.5214225/94‑1 (MQ=60)
    CAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCG                                                                                          >  SRR4302542.6005038/1‑94 (MQ=60)
     AGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGT                                                                                         <  SRR4302542.3018173/94‑1 (MQ=60)
     AGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGT                                                                                         >  SRR4302542.3359273/1‑94 (MQ=60)
     AGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGT                                                                                         >  SRR4302542.1877131/1‑94 (MQ=60)
     AGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGT                                                                                         >  SRR4302542.2065487/1‑94 (MQ=60)
      GCTTCGGCTTTGAACTTTTTAGGGGAACGGTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTT                                                                                        >  SRR4302542.6240717/1‑94 (MQ=60)
       CTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTA                                                                                       >  SRR4302542.6275210/1‑94 (MQ=60)
       CTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTA                                                                                       >  SRR4302542.6949353/1‑94 (MQ=60)
       CTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTA                                                                                       >  SRR4302542.1366889/1‑94 (MQ=60)
       CTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTA                                                                                       >  SRR4302542.1232220/1‑94 (MQ=60)
       CTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTA                                                                                       >  SRR4302542.7433581/1‑94 (MQ=60)
       CTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTA                                                                                       >  SRR4302542.4650396/1‑94 (MQ=60)
       CTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTA                                                                                       >  SRR4302542.950466/1‑94 (MQ=60)
       CTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTA                                                                                       <  SRR4302542.713157/94‑1 (MQ=60)
         TCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAA                                                                                     <  SRR4302542.4313411/94‑1 (MQ=60)
          CGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAAC                                                                                    <  SRR4302542.1968861/94‑1 (MQ=60)
           GGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAANN                                                                                   >  SRR4302542.2870340/1‑94 (MQ=60)
            GCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTC                                                                                  >  SRR4302542.4509977/1‑94 (MQ=60)
            GCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTC                                                                                  >  SRR4302542.6662724/1‑94 (MQ=60)
            GCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACNN                                                                                  >  SRR4302542.2618089/1‑94 (MQ=60)
             GTTTGAGCTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTTTATTTCAGGAAGGAGCGTCCGTTAAACTCA                                                                                 <  SRR4302542.6578500/94‑1 (MQ=60)
             CTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCA                                                                                 <  SRR4302542.3344968/94‑1 (MQ=60)
             CTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCA                                                                                 >  SRR4302542.392792/1‑94 (MQ=60)
              TTTGAACTTTTTAGAGTAACGGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCA                                                                                 >  SRR4302542.3702510/1‑94 (MQ=60)
              TTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTTATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAG                                                                                <  SRR4302542.6280848/94‑1 (MQ=60)
              TTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAG                                                                                >  SRR4302542.3597575/1‑94 (MQ=60)
               TTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGG                                                                               >  SRR4302542.1032904/1‑94 (MQ=60)
               TTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGG                                                                               <  SRR4302542.7186904/94‑1 (MQ=60)
                TGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGC                                                                              >  SRR4302542.4812826/1‑94 (MQ=60)
                 GAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGGT                                                                             >  SRR4302542.3992407/1‑94 (MQ=60)
                 GAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCT                                                                             <  SRR4302542.5374881/94‑1 (MQ=60)
                 GAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCT                                                                             <  SRR4302542.6263059/94‑1 (MQ=60)
                 GAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCT                                                                             <  SRR4302542.6024840/94‑1 (MQ=60)
                  AACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTA                                                                            >  SRR4302542.5769592/1‑94 (MQ=60)
                   ACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTAC                                                                           <  SRR4302542.7563591/94‑1 (MQ=60)
                    CTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACC                                                                          >  SRR4302542.3738572/1‑94 (MQ=60)
                    CTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACC                                                                          >  SRR4302542.2593530/1‑94 (MQ=60)
                    CTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACC                                                                          >  SRR4302542.6162226/1‑94 (MQ=60)
                        TTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAG                                                                      <  SRR4302542.4815508/94‑1 (MQ=60)
                         TAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGG                                                                     >  SRR4302542.58694/1‑94 (MQ=60)
                         TAGAATAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGG                                                                     >  SRR4302542.7048370/1‑94 (MQ=60)
                          AGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGA                                                                    >  SRR4302542.33478/1‑94 (MQ=60)
                          AGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGA                                                                    >  SRR4302542.557991/1‑94 (MQ=60)
                          AGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGA                                                                    <  SRR4302542.134280/94‑1 (MQ=60)
                          AGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGA                                                                    >  SRR4302542.1467650/1‑94 (MQ=60)
                              TAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAA                                                                >  SRR4302542.3809205/1‑94 (MQ=60)
                               AACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAAC                                                               >  SRR4302542.1417255/1‑94 (MQ=60)
                                ACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACC                                                              <  SRR4302542.5232360/94‑1 (MQ=60)
                                ACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACC                                                              <  SRR4302542.2236196/94‑1 (MQ=60)
                                 CGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCG                                                             >  SRR4302542.5470673/1‑94 (MQ=60)
                                 CGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCG                                                             >  SRR4302542.1366163/1‑94 (MQ=60)
                                 CGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCG                                                             >  SRR4302542.3387867/1‑94 (MQ=60)
                                   GTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGT                                                            >  SRR4302542.3813083/1‑94 (MQ=60)
                                     TGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCC                                                          <  SRR4302542.662142/94‑1 (MQ=60)
                                     TGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCC                                                          >  SRR4302542.1732746/1‑94 (MQ=60)
                                     TGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCC                                                          >  SRR4302542.3286021/1‑94 (MQ=60)
                                     TGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGCAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCC                                                          <  SRR4302542.6282942/94‑1 (MQ=60)
                                      GGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCT                                                         <  SRR4302542.4956664/94‑1 (MQ=60)
                                      GGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCT                                                         >  SRR4302542.6883978/1‑94 (MQ=60)
                                      GGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCT                                                         >  SRR4302542.1744368/1‑94 (MQ=60)
                                      GGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCT                                                         <  SRR4302542.386671/94‑1 (MQ=60)
                                      GGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCT                                                         >  SRR4302542.1698614/1‑94 (MQ=60)
                                       GGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTG                                                        <  SRR4302542.207315/94‑1 (MQ=60)
                                       GGTTTTTCTGCTCATTAATAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTG                                                        <  SRR4302542.3050100/94‑1 (MQ=60)
                                        GTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGA                                                       >  SRR4302542.977063/1‑94 (MQ=60)
                                         TTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAA                                                      <  SRR4302542.5881867/94‑1 (MQ=60)
                                         TTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAA                                                      >  SRR4302542.2223276/1‑94 (MQ=60)
                                            TTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGGAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAA                                                   >  SRR4302542.5966628/1‑94 (MQ=60)
                                            TTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAA                                                   >  SRR4302542.5966629/1‑94 (MQ=60)
                                            TTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAA                                                   >  SRR4302542.5009132/1‑94 (MQ=60)
                                            TTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAA                                                   >  SRR4302542.3177598/1‑94 (MQ=60)
                                            TTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAA                                                   <  SRR4302542.2899887/94‑1 (MQ=60)
                                             TCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAAC                                                  >  SRR4302542.7103173/1‑94 (MQ=60)
                                              CTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACC                                                 >  SRR4302542.5330869/1‑94 (MQ=60)
                                              CTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACC                                                 >  SRR4302542.2973608/1‑94 (MQ=60)
                                               TGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCA                                                >  SRR4302542.680131/1‑94 (MQ=60)
                                               TGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCA                                                >  SRR4302542.2660941/1‑94 (MQ=60)
                                                GCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAG                                               <  SRR4302542.711707/94‑1 (MQ=60)
                                                GCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAG                                               >  SRR4302542.6520186/1‑94 (MQ=60)
                                                 CTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGA                                              <  SRR4302542.7282726/94‑1 (MQ=60)
                                                  TCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGAC                                             >  SRR4302542.2338431/1‑94 (MQ=60)
                                                  TCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGAC                                             <  SRR4302542.826187/94‑1 (MQ=60)
                                                  TCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGAC                                             <  SRR4302542.2564892/94‑1 (MQ=60)
                                                  TCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGAC                                             <  SRR4302542.7409204/94‑1 (MQ=60)
                                                  TCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGAC                                             <  SRR4302542.3081376/94‑1 (MQ=60)
                                                   CATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACG                                            <  SRR4302542.5978692/94‑1 (MQ=60)
                                                   CATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACG                                            <  SRR4302542.936795/94‑1 (MQ=60)
                                                   CATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACG                                            >  SRR4302542.304908/1‑94 (MQ=60)
                                                   CATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACG                                            <  SRR4302542.887102/94‑1 (MQ=60)
                                                   CATTATTAGCTCCTTCTGACGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACG                                            <  SRR4302542.6181803/94‑1 (MQ=60)
                                                    ATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGG                                           >  SRR4302542.6916216/1‑94 (MQ=60)
                                                    ATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGG                                           >  SRR4302542.2970428/1‑94 (MQ=60)
                                                    ATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGG                                           >  SRR4302542.6269938/1‑94 (MQ=60)
                                                     TTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGC                                          >  SRR4302542.6681383/1‑94 (MQ=60)
                                                     TTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGC                                          <  SRR4302542.3899843/94‑1 (MQ=60)
                                                      TATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCA                                         >  SRR4302542.3490436/1‑94 (MQ=60)
                                                      TATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCA                                         <  SRR4302542.4332058/94‑1 (MQ=60)
                                                      TATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCA                                         <  SRR4302542.5209714/94‑1 (MQ=60)
                                                      TATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCA                                         <  SRR4302542.1552632/94‑1 (MQ=60)
                                                       ATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAG                                        >  SRR4302542.5347752/1‑94 (MQ=60)
                                                       ATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAG                                        >  SRR4302542.7346948/1‑94 (MQ=60)
                                                       ATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAG                                        <  SRR4302542.5378996/94‑1 (MQ=60)
                                                       ATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAG                                        >  SRR4302542.5456488/1‑94 (MQ=60)
                                                       ATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAG                                        >  SRR4302542.1718499/1‑94 (MQ=60)
                                                          AGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACG                                     <  SRR4302542.7488684/94‑1 (MQ=60)
                                                          AGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACG                                     >  SRR4302542.5454645/1‑94 (MQ=60)
                                                          AGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACG                                     >  SRR4302542.7098816/1‑94 (MQ=60)
                                                           GCTCGTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGG                                    >  SRR4302542.7044767/1‑94 (MQ=60)
                                                           GCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGG                                    <  SRR4302542.1393371/94‑1 (MQ=60)
                                                           GCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGG                                    <  SRR4302542.367311/94‑1 (MQ=60)
                                                           GCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGG                                    >  SRR4302542.2208316/1‑94 (MQ=60)
                                                            CTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGG                                   >  SRR4302542.6105125/1‑94 (MQ=60)
                                                            CTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGG                                   >  SRR4302542.5826796/1‑94 (MQ=60)
                                                            CTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGG                                   <  SRR4302542.6872059/94‑1 (MQ=60)
                                                            CTCCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGG                                   <  SRR4302542.3928714/94‑1 (MQ=60)
                                                              CCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCT                                 >  SRR4302542.4178776/1‑94 (MQ=60)
                                                              CCTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCT                                 <  SRR4302542.1954029/94‑1 (MQ=60)
                                                               CTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTG                                >  SRR4302542.5510675/1‑94 (MQ=60)
                                                               CTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTG                                >  SRR4302542.2390327/1‑94 (MQ=60)
                                                               CTTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTG                                >  SRR4302542.5075397/1‑94 (MQ=60)
                                                                TTCTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGT                               <  SRR4302542.647388/94‑1 (MQ=60)
                                                                  CTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTAT                             >  SRR4302542.6694644/1‑94 (MQ=60)
                                                                  CTGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTAT                             >  SRR4302542.4287840/1‑94 (MQ=60)
                                                                   TGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATT                            >  SRR4302542.901984/1‑94 (MQ=60)
                                                                   TGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATT                            <  SRR4302542.212599/94‑1 (MQ=60)
                                                                   TGATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATT                            >  SRR4302542.3751341/1‑94 (MQ=60)
                                                                    GATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTA                           >  SRR4302542.3505957/1‑94 (MQ=60)
                                                                    GATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTA                           >  SRR4302542.6955923/1‑94 (MQ=60)
                                                                     ATGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTCTTAC                          <  SRR4302542.7035016/94‑1 (MQ=60)
                                                                      TGCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACG                         >  SRR4302542.2499003/1‑94 (MQ=60)
                                                                       GCCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGC                        >  SRR4302542.2514236/1‑94 (MQ=60)
                                                                        CCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCA                       >  SRR4302542.6140574/1‑94 (MQ=60)
                                                                        CCATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCA                       <  SRR4302542.3273987/94‑1 (MQ=60)
                                                                         CATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAG                      >  SRR4302542.6108156/1‑94 (MQ=60)
                                                                         CATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAG                      >  SRR4302542.7231820/1‑94 (MQ=60)
                                                                          ATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGT                     <  SRR4302542.6414284/94‑1 (MQ=60)
                                                                          ATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGT                     >  SRR4302542.3065365/1‑94 (MQ=60)
                                                                          ATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGT                     >  SRR4302542.3091440/1‑94 (MQ=60)
                                                                          ATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGT                     >  SRR4302542.852563/1‑94 (MQ=60)
                                                                          ATTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGT                     >  SRR4302542.3884431/1‑94 (MQ=60)
                                                                           TTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTC                    <  SRR4302542.5146292/94‑1 (MQ=60)
                                                                           TTCTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTC                    >  SRR4302542.673790/1‑94 (MQ=60)
                                                                             CTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAG                  <  SRR4302542.6456838/94‑1 (MQ=60)
                                                                             CTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAG                  <  SRR4302542.757383/94‑1 (MQ=60)
                                                                             CTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAG                  <  SRR4302542.1103572/94‑1 (MQ=60)
                                                                             CTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAG                  >  SRR4302542.6137585/1‑94 (MQ=60)
                                                                             CTATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAG                  >  SRR4302542.269424/1‑94 (MQ=60)
                                                                               ATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGT                >  SRR4302542.4643522/1‑94 (MQ=60)
                                                                               ATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGT                <  SRR4302542.1897545/94‑1 (MQ=60)
                                                                               ATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGT                <  SRR4302542.2388404/94‑1 (MQ=60)
                                                                               ATTTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGT                >  SRR4302542.3880629/1‑94 (MQ=60)
                                                                                 TTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTAC              <  SRR4302542.6761085/94‑1 (MQ=60)
                                                                                 TTCAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTAC              >  SRR4302542.235037/1‑94 (MQ=60)
                                                                                   CAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTT            <  SRR4302542.2185574/94‑1 (MQ=60)
                                                                                   CAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTT            <  SRR4302542.1737284/94‑1 (MQ=60)
                                                                                   CAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTT            >  SRR4302542.2733661/1‑94 (MQ=60)
                                                                                   CAGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTT            <  SRR4302542.3024267/94‑1 (MQ=60)
                                                                                    AGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTG           >  SRR4302542.3648136/1‑94 (MQ=60)
                                                                                    AGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTG           <  SRR4302542.5846672/94‑1 (MQ=60)
                                                                                    AGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTG           >  SRR4302542.5645314/1‑94 (MQ=60)
                                                                                    AGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTG           <  SRR4302542.2656524/94‑1 (MQ=60)
                                                                                    AGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTG           >  SRR4302542.2419916/1‑94 (MQ=60)
                                                                                    AGGAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTG           <  SRR4302542.180686/94‑1 (MQ=60)
                                                                                     GGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGA          <  SRR4302542.493535/94‑1 (MQ=60)
                                                                                      GAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAG         <  SRR4302542.5560397/94‑1 (MQ=60)
                                                                                      GAAGGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAG         <  SRR4302542.5828331/94‑1 (MQ=60)
                                                                                         GGAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTA      <  SRR4302542.3055584/94‑1 (MQ=60)
                                                                                          GAGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTAC     >  SRR4302542.5594679/1‑94 (MQ=60)
                                                                                           AGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACA    <  SRR4302542.4734248/94‑1 (MQ=60)
                                                                                           AGCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACA    <  SRR4302542.905427/94‑1 (MQ=60)
                                                                                            GCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACAT   <  SRR4302542.6027574/94‑1 (MQ=60)
                                                                                            GCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACAT   <  SRR4302542.5938645/94‑1 (MQ=60)
                                                                                            GCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACAT   >  SRR4302542.5923200/1‑94 (MQ=60)
                                                                                            GCGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACAT   >  SRR4302542.2378004/1‑94 (MQ=60)
                                                                                             TGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACATG  <  SRR4302542.4808222/94‑1 (MQ=60)
                                                                                             |                                                                                             
CTGACAGCTTCGGCTTTGAACTTTTTAGAGTAACGTTGGGTTTTTCTGCTCATTATTAGCTCCTTCTGATGCCATTCTATTTCAGGAAGGAGTGTCCGTTAAACTCAGGCTACCTCAGGAAAAACCGTCCTGAAAAACCAGACGGCAGACGGGCTGTATTACGCAGTCAGGTACTTGAGCTACATG  >  NC_000913/4506458‑4506643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: