Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1061	294.1	15065038	98.6%	14854127	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,522,805	G→A	A189A (GCC→GCT)	yjhI ←	putative regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,522,805	0	G	A	80.9%	683.3 / 118.6	277	A189A (GCC→GCT)	yjhI	putative regulator
Reads supporting (aligned to +/- strand): ref base G (30/23); new base A (102/122); total (132/145)
Fisher's exact test for biased strand distribution p-value = 1.70e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.83e-01

Only 100 of 285 total aligned reads displayed.

GAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTGC  >  NC_000913/4522713‑4522897

  aaGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGc                                                                                            <  1:7034369/93‑1 (MQ=255)

  aaGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGc                                                                                            <  1:3694498/93‑1 (MQ=255)

   aGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGcc                                                                                           <  1:194173/93‑1 (MQ=255)

    gTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGccc                                                                                          >  2:7229189/1‑93 (MQ=255)

    gTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGccc                                                                                          >  2:6785437/1‑93 (MQ=255)

    gTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGccc                                                                                          >  2:596427/1‑93 (MQ=255)

    gTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGccc                                                                                          >  1:4284343/1‑93 (MQ=255)

    gTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGccc                                                                                          >  2:1753441/1‑93 (MQ=255)

    gTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGccc                                                                                          >  1:609480/1‑93 (MQ=255)

    gTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGccc                                                                                          <  2:5430831/93‑1 (MQ=255)

    gTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGccc                                                                                          >  1:1350025/1‑93 (MQ=255)

     tGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCa                                                                                         <  2:2900121/93‑1 (MQ=255)

     tGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCa                                                                                         <  1:33730/93‑1 (MQ=255)

       agaTTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATc                                                                                       <  1:2216390/93‑1 (MQ=255)

       agaTTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATc                                                                                       >  2:4276646/1‑93 (MQ=255)

       agaTTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATc                                                                                       <  2:3453287/93‑1 (MQ=255)

       agaTTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATc                                                                                       <  1:5844798/93‑1 (MQ=255)

       agaTTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATc                                                                                       >  1:3177052/1‑93 (MQ=255)

           tGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCg                                                                                   >  2:6091856/1‑93 (MQ=255)

            gCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGa                                                                                  <  2:793224/93‑1 (MQ=255)

            gCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGa                                                                                  >  1:3245705/1‑93 (MQ=255)

            gCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGa                                                                                  >  1:3039295/1‑93 (MQ=255)

             cATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGaa                                                                                 >  1:7193772/1‑93 (MQ=255)

              aTAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAg                                                                                >  1:6572630/1‑93 (MQ=255)

               tAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAgg                                                                               <  1:6283722/93‑1 (MQ=255)

               tAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAgg                                                                               >  1:1288706/1‑93 (MQ=255)

               tAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAgg                                                                               >  1:5687380/1‑93 (MQ=255)

               tAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAgg                                                                               >  1:4759450/1‑93 (MQ=255)

                aGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGc                                                                              >  1:2884234/1‑93 (MQ=255)

                 gTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCg                                                                             >  1:6652186/1‑93 (MQ=255)

                   tAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCgtg                                                                           <  1:1118656/93‑1 (MQ=255)

                    aaCTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCgtgt                                                                          <  1:6927863/93‑1 (MQ=255)

                    aaCTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCgtgt                                                                          <  2:6059925/93‑1 (MQ=255)

                       tctGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGtttt                                                                       >  2:401878/1‑93 (MQ=255)

                       tctGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGtttt                                                                       <  2:3420344/93‑1 (MQ=255)

                       tctGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGtttt                                                                       <  1:554131/93‑1 (MQ=255)

                        ctGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGttttt                                                                      <  1:1075572/93‑1 (MQ=255)

                             ataCATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTaa                                                                 >  1:6085954/1‑93 (MQ=255)

                              taCATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAAt                                                                <  1:4996213/93‑1 (MQ=255)

                              taCATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAAt                                                                <  2:117427/93‑1 (MQ=255)

                                cATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAAttc                                                              <  2:6711844/93‑1 (MQ=255)

                                cATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTCGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAAttc                                                              <  1:3839575/93‑1 (MQ=255)

                                 atatTGAATACCGGCATACTTAAACATGCCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAAttct                                                             >  2:6428159/1‑93 (MQ=255)

                                 atatTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAAttct                                                             >  1:2833368/1‑93 (MQ=255)

                                  tatTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAAttctt                                                            >  1:4012087/1‑93 (MQ=255)

                                  tatTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAAttctt                                                            <  1:5366615/93‑1 (MQ=255)

                                   atTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAAttcttc                                                           <  2:3863137/93‑1 (MQ=255)

                                    ttGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTcc                                                          <  1:5901837/93‑1 (MQ=255)

                                     tGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCa                                                         >  1:5486226/1‑93 (MQ=255)

                                         tACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGaaa                                                     <  2:1086433/93‑1 (MQ=255)

                                          aCCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAAc                                                    <  2:2190214/93‑1 (MQ=255)

                                          aCCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAAc                                                    <  2:3935326/93‑1 (MQ=255)

                                            cGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACaa                                                  <  2:2037394/93‑1 (MQ=255)

                                            cGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACaa                                                  >  2:2101947/1‑93 (MQ=255)

                                             ggCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAAt                                                 <  1:5198380/93‑1 (MQ=255)

                                              gCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAAtt                                                <  2:4340101/93‑1 (MQ=255)

                                              gCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAAtt                                                >  1:4590977/1‑93 (MQ=255)

                                                aTACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAAtttt                                              >  2:4595227/1‑93 (MQ=255)

                                                aTACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAAtttt                                              <  2:4158015/93‑1 (MQ=255)

                                                 tACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAAttttt                                             >  1:3555240/1‑93 (MQ=255)

                                                  aCTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAAtttttt                                            <  2:895577/93‑1 (MQ=255)

                                                   cTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTa                                           <  1:5073303/93‑1 (MQ=255)

                                                   cTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTa                                           >  1:1218410/1‑93 (MQ=255)

                                                   cTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTa                                           <  2:7037162/93‑1 (MQ=255)

                                                    ttAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTAt                                          >  1:6634011/1‑93 (MQ=255)

                                                    ttAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTAt                                          <  2:4209298/93‑1 (MQ=255)

                                                    ttAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTAt                                          <  1:7159706/93‑1 (MQ=255)

                                                       aaCATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCgg                                       >  1:4032333/1‑93 (MQ=255)

                                                        aCATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGt                                      >  1:786786/1‑93 (MQ=255)

                                                          aTACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTaa                                    >  2:44985/1‑93 (MQ=255)

                                                           tACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTaaa                                   >  2:5072256/1‑93 (MQ=255)

                                                           tACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTaaa                                   <  1:1834206/93‑1 (MQ=255)

                                                            aCCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAAt                                  <  2:1334455/93‑1 (MQ=255)

                                                             ccGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATg                                 <  2:2561716/93‑1 (MQ=255)

                                                               gCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTa                               <  1:6318342/93‑1 (MQ=255)

                                                                 cccATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTAtt                             >  1:931418/1‑93 (MQ=255)

                                                                 cccATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTAtt                             <  1:3401924/93‑1 (MQ=255)

                                                                   cATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTgc                           <  1:2558747/93‑1 (MQ=255)

                                                                     tAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTgcgc                         >  2:2325935/1‑93 (MQ=255)

                                                                     tAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTgcgc                         >  2:1679869/1‑93 (MQ=255)

                                                                        gTTGATTCTTCGTTGTCTATGGCCCATCCCGGAAGGCGTTTTTTTTGTAATT‑TTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTAt                     <  1:6459116/93‑1 (MQ=255)

                                                                        gTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTa                      >  1:742312/1‑93 (MQ=255)

                                                                        gTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTa                      <  1:1589044/93‑1 (MQ=255)

                                                                         ttGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTAt                     >  1:6860387/1‑93 (MQ=255)

                                                                          tGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTAtg                    >  1:2659063/1‑93 (MQ=255)

                                                                            aTTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTAtgtg                  >  1:2920415/1‑93 (MQ=255)

                                                                            aTTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTAtgtg                  <  2:5269418/93‑1 (MQ=255)

                                                                             ttcttcGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTgg                 <  1:3956240/93‑1 (MQ=255)

                                                                              tcttcGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGa                <  2:682136/93‑1 (MQ=255)

                                                                              tcttcGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGa                <  1:3115521/93‑1 (MQ=255)

                                                                               cttcGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAg               <  2:7140339/93‑1 (MQ=255)

                                                                                ttcGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGt              <  2:1585332/93‑1 (MQ=255)

                                                                                    ttGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAAc          >  2:5524770/1‑93 (MQ=255)

                                                                                    ttGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAAc          <  1:7068249/93‑1 (MQ=255)

                                                                                     tGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACg         >  2:4852648/1‑93 (MQ=255)

                                                                                      gTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGt        >  1:235096/1‑93 (MQ=255)

                                                                                       tCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTg       <  2:5603557/93‑1 (MQ=255)

                                                                                         tataGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAg     <  2:3774665/93‑1 (MQ=255)

                                                                                         tATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAg     >  1:1729324/1‑93 (MQ=255)

                                                                                            ggCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTGc  <  2:2983462/93‑1 (MQ=255)

GAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTGC  >  NC_000913/4522713‑4522897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

AGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTG  >  NC_000913/4522712‑4522896

AGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATG                                                                                             >  SRR4302542.110434/1‑94 (MQ=60)

AGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATA                                                                                             <  SRR4302542.5302358/94‑1 (MQ=60)

AGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATA                                                                                             <  SRR4302542.4923395/94‑1 (MQ=60)

AGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATA                                                                                             <  SRR4302542.1323358/94‑1 (MQ=60)

AGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATA                                                                                             >  SRR4302542.1665383/1‑94 (MQ=60)

 GAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGACTACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAG                                                                                            >  SRR4302542.6287691/1‑94 (MQ=60)

 GAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAG                                                                                            <  SRR4302542.3533337/94‑1 (MQ=60)

 GAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAG                                                                                            <  SRR4302542.2908646/94‑1 (MQ=60)

  AAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGC                                                                                           >  SRR4302542.2887668/1‑94 (MQ=60)

   AAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCC                                                                                          <  SRR4302542.7103477/94‑1 (MQ=60)

   AAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCC                                                                                          <  SRR4302542.3731059/94‑1 (MQ=60)

    AGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCC                                                                                         >  SRR4302542.4326485/1‑94 (MQ=60)

    AGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCC                                                                                         >  SRR4302542.614723/1‑94 (MQ=60)

    AGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCC                                                                                         <  SRR4302542.195820/94‑1 (MQ=60)

    AGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCC                                                                                         >  SRR4302542.1361685/1‑94 (MQ=60)

      TGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCAT                                                                                       <  SRR4302542.34032/94‑1 (MQ=60)

       GAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATC                                                                                      >  SRR4302542.3207162/1‑94 (MQ=60)

        AGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCC                                                                                     <  SRR4302542.5901489/94‑1 (MQ=60)

        AGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCC                                                                                     <  SRR4302542.2235463/94‑1 (MQ=60)

        AGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCC                                                                                     <  SRR4302542.1136088/94‑1 (MQ=60)

         GATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCC                                                                                    >  SRR4302542.2268667/1‑94 (MQ=60)

            TGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGA                                                                                 >  SRR4302542.3068321/1‑94 (MQ=60)

            TGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGA                                                                                 >  SRR4302542.3276379/1‑94 (MQ=60)

            TGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGA                                                                                 >  SRR4302542.6618306/1‑94 (MQ=60)

             GCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAA                                                                                >  SRR4302542.1879051/1‑94 (MQ=60)

             GCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAA                                                                                >  SRR4302542.7264370/1‑94 (MQ=60)

              CATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAG                                                                               >  SRR4302542.6637396/1‑94 (MQ=60)

              CATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAG                                                                               <  SRR4302542.3260245/94‑1 (MQ=60)

               ATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGG                                                                              >  SRR4302542.4805858/1‑94 (MQ=60)

               ATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGG                                                                              <  SRR4302542.5498743/94‑1 (MQ=60)

               ATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGG                                                                              >  SRR4302542.5742608/1‑94 (MQ=60)

               ATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGG                                                                              >  SRR4302542.1299803/1‑94 (MQ=60)

                TAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGC                                                                             <  SRR4302542.6345647/94‑1 (MQ=60)

                TAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGC                                                                             >  SRR4302542.2911929/1‑94 (MQ=60)

                 AGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCG                                                                            >  SRR4302542.6717743/1‑94 (MQ=60)

                 AGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCG                                                                            <  SRR4302542.6115237/94‑1 (MQ=60)

                   TTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTG                                                                          >  SRR4302542.7594643/1‑94 (MQ=60)

                    TAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGT                                                                         <  SRR4302542.6468945/94‑1 (MQ=60)

                    TAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGT                                                                         <  SRR4302542.1295845/94‑1 (MQ=60)

                    TAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGT                                                                         <  SRR4302542.1128218/94‑1 (MQ=60)

                     AACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTT                                                                        >  SRR4302542.2290955/1‑94 (MQ=60)

                     AACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTT                                                                        >  SRR4302542.6884189/1‑94 (MQ=60)

                     AACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTT                                                                        <  SRR4302542.6995882/94‑1 (MQ=60)

                      ACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTT                                                                       <  SRR4302542.1861127/94‑1 (MQ=60)

                      ACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTT                                                                       <  SRR4302542.3450052/94‑1 (MQ=60)

                      ACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTT                                                                       <  SRR4302542.5870604/94‑1 (MQ=60)

                       CTCTGTTATACATATTTAATACCGGCATACTTAAACATACCCCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGGGGTTT                                                                      >  SRR4302542.2416174/1‑94 (MQ=60)

                       CTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTT                                                                      >  SRR4302542.3172013/1‑94 (MQ=60)

                        TCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTT                                                                     <  SRR4302542.7033125/94‑1 (MQ=60)

                        TCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTT                                                                     <  SRR4302542.3316405/94‑1 (MQ=60)

                        TCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTT                                                                     <  SRR4302542.558914/94‑1 (MQ=60)

                         CTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTT                                                                    <  SRR4302542.5563426/94‑1 (MQ=60)

                         CTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTT                                                                    <  SRR4302542.5546414/94‑1 (MQ=60)

                         CTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTT                                                                    <  SRR4302542.1084817/94‑1 (MQ=60)

                          TGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTG                                                                   >  SRR4302542.5733033/1‑94 (MQ=60)

                          TGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTG                                                                   >  SRR4302542.7169029/1‑94 (MQ=60)

                           GTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGCGTTTTTTGT                                                                  >  SRR4302542.1249914/1‑94 (MQ=60)

                           GTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGT                                                                  >  SRR4302542.7235250/1‑94 (MQ=60)

                           GTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGT                                                                  >  SRR4302542.5117005/1‑94 (MQ=60)

                           GTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGT                                                                  >  SRR4302542.6677904/1‑94 (MQ=60)

                             TATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAA                                                                >  SRR4302542.6144877/1‑94 (MQ=60)

                              ATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAAT                                                               <  SRR4302542.300353/94‑1 (MQ=60)

                               TACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATT                                                              <  SRR4302542.6740167/94‑1 (MQ=60)

                               TACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATT                                                              <  SRR4302542.5044754/94‑1 (MQ=60)

                                ACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTC                                                             <  SRR4302542.788217/94‑1 (MQ=60)

                                 CATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCT                                                            >  SRR4302542.2860606/1‑94 (MQ=60)

                                 CATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCT                                                            <  SRR4302542.3721769/94‑1 (MQ=60)

                                 CATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCT                                                            <  SRR4302542.2460029/94‑1 (MQ=60)

                                 CATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTCGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCT                                                            <  SRR4302542.3877543/94‑1 (MQ=60)

                                  ATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTT                                                           >  SRR4302542.1347030/1‑94 (MQ=60)

                                  ATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTT                                                           >  SRR4302542.4051679/1‑94 (MQ=60)

                                   TATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTC                                                          <  SRR4302542.5418770/94‑1 (MQ=60)

                                   TATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTC                                                          >  SRR4302542.5947760/1‑94 (MQ=60)

                                   TATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTC                                                          >  SRR4302542.4943852/1‑94 (MQ=60)

                                   TATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTC                                                          >  SRR4302542.6651002/1‑94 (MQ=60)

                                    ATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCC                                                         <  SRR4302542.4012948/94‑1 (MQ=60)

                                     TTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCA                                                        <  SRR4302542.5959049/94‑1 (MQ=60)

                                     TTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCA                                                        >  SRR4302542.5539521/1‑94 (MQ=60)

                                     TTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCA                                                        <  SRR4302542.3278693/94‑1 (MQ=60)

                                      TGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAG                                                       >  SRR4302542.5073290/1‑94 (MQ=60)

                                      TGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAG                                                       <  SRR4302542.3428486/94‑1 (MQ=60)

                                       GAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGA                                                      >  SRR4302542.3194456/1‑94 (MQ=60)

                                         ATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAA                                                    <  SRR4302542.6355543/94‑1 (MQ=60)

                                           ACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACA                                                  <  SRR4302542.2837249/94‑1 (MQ=60)

                                           ACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGCGTTTTTTGTAATTCTTCCAGAAACA                                                  <  SRR4302542.6445135/94‑1 (MQ=60)

                                            CCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAA                                                 <  SRR4302542.1839555/94‑1 (MQ=60)

                                             CGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAAT                                                >  SRR4302542.2076072/1‑94 (MQ=60)

                                              GGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATT                                               >  SRR4302542.7236253/1‑94 (MQ=60)

                                              GGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATT                                               >  SRR4302542.4635879/1‑94 (MQ=60)

                                              GGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATT                                               >  SRR4302542.5420379/1‑94 (MQ=60)

                                              GGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATT                                               >  SRR4302542.4122299/1‑94 (MQ=60)

                                              GGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATT                                               <  SRR4302542.5248896/94‑1 (MQ=60)

                                                CATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTT                                             >  SRR4302542.1587001/1‑94 (MQ=60)

                                                 ATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTT                                            >  SRR4302542.3736985/1‑94 (MQ=60)

                                                 ATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTT                                            >  SRR4302542.3588462/1‑94 (MQ=60)

                                                 ATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTT                                            >  SRR4302542.906675/1‑94 (MQ=60)

                                                  TACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTT                                           >  SRR4302542.6988204/1‑94 (MQ=60)

                                                  TACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTT                                           >  SRR4302542.1351262/1‑94 (MQ=60)

                                                  TACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTT                                           >  SRR4302542.6363020/1‑94 (MQ=60)

                                                  TACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTT                                           <  SRR4302542.3047173/94‑1 (MQ=60)

                                                   ACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTA                                          >  SRR4302542.1228897/1‑94 (MQ=60)

                                                    CTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTAT                                         >  SRR4302542.6699409/1‑94 (MQ=60)

                                                    CTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTAT                                         <  SRR4302542.5122609/94‑1 (MQ=60)

                                                     TTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATC                                        <  SRR4302542.7229937/94‑1 (MQ=60)

                                                      TAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCG                                       >  SRR4302542.6044134/1‑94 (MQ=60)

                                                       AAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGG                                      <  SRR4302542.3230692/94‑1 (MQ=60)

                                                       AAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGG                                      >  SRR4302542.4072122/1‑94 (MQ=60)

                                                       AAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGG                                      >  SRR4302542.7119628/1‑94 (MQ=60)

                                                        AACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGT                                     >  SRR4302542.793567/1‑94 (MQ=60)

                                                        AACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGT                                     <  SRR4302542.5151620/94‑1 (MQ=60)

                                                          CATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAAAAATTTTTTATCGGTAA                                   <  SRR4302542.4708503/94‑1 (MQ=60)

                                                           ATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAA                                  >  SRR4302542.660627/1‑94 (MQ=60)

                                                           ATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAA                                  >  SRR4302542.1593191/1‑94 (MQ=60)

                                                           ATACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAA                                  >  SRR4302542.3818589/1‑94 (MQ=60)

                                                            TACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAAT                                 <  SRR4302542.1850094/94‑1 (MQ=60)

                                                             ACCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATG                                >  SRR4302542.972730/1‑94 (MQ=60)

                                                              CCGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGT                               <  SRR4302542.1192541/94‑1 (MQ=60)

                                                               CGCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTA                              >  SRR4302542.3114580/1‑94 (MQ=60)

                                                                GCCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTAT                             <  SRR4302542.6380617/94‑1 (MQ=60)

                                                                 CCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATT                            >  SRR4302542.3689183/1‑94 (MQ=60)

                                                                 CCCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATT                            >  SRR4302542.939427/1‑94 (MQ=60)

                                                                  CCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTG                           >  SRR4302542.5200917/1‑94 (MQ=60)

                                                                  CCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTG                           <  SRR4302542.920204/94‑1 (MQ=60)

                                                                  CCCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTG                           <  SRR4302542.3433823/94‑1 (MQ=60)

                                                                   CCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGC                          >  SRR4302542.1975005/1‑94 (MQ=60)

                                                                   CCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGC                          >  SRR4302542.716605/1‑94 (MQ=60)

                                                                   CCATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGC                          >  SRR4302542.4448150/1‑94 (MQ=60)

                                                                    CATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCG                         >  SRR4302542.591880/1‑94 (MQ=60)

                                                                    CATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCG                         <  SRR4302542.2583552/94‑1 (MQ=60)

                                                                     ATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGC                        >  SRR4302542.4503372/1‑94 (MQ=60)

                                                                     ATAGGTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGC                        >  SRR4302542.6147681/1‑94 (MQ=60)

                                                                        GGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTA                     >  SRR4302542.748749/1‑94 (MQ=60)

                                                                         GTTGATTCTTCGTTGTCTATGGCCCATCCCGGAAGGCGTTTTTTTTGTAATT‑TTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATG                   <  SRR4302542.6522717/94‑1 (MQ=60)

                                                                         GTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTAT                    >  SRR4302542.6927796/1‑94 (MQ=60)

                                                                         GTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTAT                    <  SRR4302542.1602762/94‑1 (MQ=60)

                                                                         GTTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTAT                    <  SRR4302542.5261388/94‑1 (MQ=60)

                                                                          TTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATG                   <  SRR4302542.2943255/94‑1 (MQ=60)

                                                                          TTGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATG                   >  SRR4302542.2684730/1‑94 (MQ=60)

                                                                           TGATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGT                  <  SRR4302542.698447/94‑1 (MQ=60)

                                                                            GATTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTG                 >  SRR4302542.2948406/1‑94 (MQ=60)

                                                                              TTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGA               <  SRR4302542.3995298/94‑1 (MQ=60)

                                                                              TTCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGA               >  SRR4302542.1682635/1‑94 (MQ=60)

                                                                               TCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAG              >  SRR4302542.3556379/1‑94 (MQ=60)

                                                                               TCTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAG              <  SRR4302542.3145127/94‑1 (MQ=60)

                                                                                CTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGT             >  SRR4302542.3994251/1‑94 (MQ=60)

                                                                                CTTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGT             <  SRR4302542.5006449/94‑1 (MQ=60)

                                                                                 TTCGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTT            <  SRR4302542.2844350/94‑1 (MQ=60)

                                                                                   CGTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAA          <  SRR4302542.6328812/94‑1 (MQ=60)

                                                                                    GTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAAC         >  SRR4302542.6717509/1‑94 (MQ=60)

                                                                                    GTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAAC         <  SRR4302542.406137/94‑1 (MQ=60)

                                                                                    GTTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATGCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAAC         >  SRR4302542.6272526/1‑94 (MQ=60)

                                                                                     TTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACG        <  SRR4302542.3974612/94‑1 (MQ=60)

                                                                                     TTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACG        <  SRR4302542.7137624/94‑1 (MQ=60)

                                                                                     TTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACG        <  SRR4302542.7062245/94‑1 (MQ=60)

                                                                                     TTGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACG        <  SRR4302542.306999/94‑1 (MQ=60)

                                                                                      TGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGT       <  SRR4302542.1694039/94‑1 (MQ=60)

                                                                                      TGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGT       >  SRR4302542.2678399/1‑94 (MQ=60)

                                                                                      TGTCTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGT       >  SRR4302542.237117/1‑94 (MQ=60)

                                                                                         CTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAG    >  SRR4302542.1744329/1‑94 (MQ=60)

                                                                                         CTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAG    >  SRR4302542.5760430/1‑94 (MQ=60)

                                                                                         CTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAG    <  SRR4302542.7114829/94‑1 (MQ=60)

                                                                                         CTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAG    <  SRR4302542.4091889/94‑1 (MQ=60)

                                                                                         CTATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAAGGTATTGCGCGTAGGTGGAGTTAACGTGAG    <  SRR4302542.4706736/94‑1 (MQ=60)

                                                                                          TATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGT   <  SRR4302542.258768/94‑1 (MQ=60)

                                                                                          TATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGT   <  SRR4302542.4013147/94‑1 (MQ=60)

                                                                                          TATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGT   <  SRR4302542.7422628/94‑1 (MQ=60)

                                                                                          TATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGT   <  SRR4302542.5686876/94‑1 (MQ=60)

                                                                                           ATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTG  <  SRR4302542.293068/94‑1 (MQ=60)

                                                                                           ATAGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTG  >  SRR4302542.2746996/1‑94 (MQ=60)

AGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTG  >  NC_000913/4522712‑4522896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`