Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,330,060 |
A→G |
D330G (GAC→GGC) |
topA → |
DNA topoisomerase type I omega protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,330,060 | 0 | A | G | 99.1%
| 1095.2
/ ‑2.2
| 321 | D330G (GAC→GGC) | topA | DNA topoisomerase type I omega protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (150/168); minor base T (3/0); total (153/168) |
| Fisher's exact test for biased strand distribution p-value = 1.07e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.41e-01 |
Only 100 of 329 total aligned reads displayed.
GCGTGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGACGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAA > NC_000913/1329970‑1330149
|
gTGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGcgcg < 1:4223860/93‑1 (MQ=255)
tGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCgg > 1:2033834/1‑93 (MQ=255)
tGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCgg < 1:3567424/93‑1 (MQ=255)
ggAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCgg < 1:2126779/92‑1 (MQ=255)
aaaaaaaCCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTa < 2:7633296/93‑1 (MQ=255)
aaaaaaaCCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTa > 2:415139/1‑93 (MQ=255)
aaaaaCCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTaaa < 2:4983284/93‑1 (MQ=255)
aCCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATg < 2:8099117/93‑1 (MQ=255)
aCCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATg < 2:1597246/93‑1 (MQ=255)
aCCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATg < 2:3891352/93‑1 (MQ=255)
ccATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATgg > 2:7394256/1‑93 (MQ=255)
atgatgatgGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGtt < 1:2634319/93‑1 (MQ=255)
atgatgatgGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGtt < 2:1172102/93‑1 (MQ=255)
atgatgatgGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGtt < 1:4083121/93‑1 (MQ=255)
tgatgatgGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTc > 2:4421059/1‑93 (MQ=255)
tgatgatgGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTc < 2:5581137/93‑1 (MQ=255)
gatgatgGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTcg > 2:2338282/1‑93 (MQ=255)
gatgatgGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTcg < 1:6129719/93‑1 (MQ=255)
atgatgGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTTCACTAACCTGAGTCAGGGCGCGGTAAATATAGTTcgc > 1:5984299/1‑93 (MQ=255)
gatgGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTAAGTCAGGGCGCGGGAAATATGGTTCGCgg > 1:4950026/1‑93 (MQ=255)
ggCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAGCCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTta < 1:1044998/93‑1 (MQ=255)
gcgcAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTtat < 1:8550074/93‑1 (MQ=255)
cgcAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCTGTAAATATGGTTCGCGGTtata < 2:6177994/93‑1 (MQ=255)
cgcAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTtata < 1:322210/93‑1 (MQ=255)
gcAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTatat > 2:606092/1‑93 (MQ=255)
gcAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTatat > 1:1672612/1‑93 (MQ=255)
cAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATc < 2:5477401/93‑1 (MQ=255)
aGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCa < 1:7836759/93‑1 (MQ=255)
gCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAg < 1:4319957/93‑1 (MQ=255)
gCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAg > 1:7552269/1‑93 (MQ=255)
cGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGc > 1:7998588/1‑93 (MQ=255)
gTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCg > 2:8083823/1‑93 (MQ=255)
gTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCg > 2:2515332/1‑93 (MQ=255)
ttGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGAt < 1:3319502/93‑1 (MQ=255)
ttGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGAt < 1:3775448/93‑1 (MQ=255)
ttGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGAt < 1:4011995/93‑1 (MQ=255)
tGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATa < 1:5590572/93‑1 (MQ=255)
tGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATa < 2:3457305/93‑1 (MQ=255)
gTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATaa < 1:5851590/93‑1 (MQ=255)
aTGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAAtt < 2:429322/93‑1 (MQ=255)
aTGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAAtt < 2:4851415/93‑1 (MQ=255)
gAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAAtttt < 1:3183412/93‑1 (MQ=255)
gAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAAtttt > 2:7027408/1‑93 (MQ=255)
aaGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTg > 1:2536039/1‑93 (MQ=255)
aaGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTg > 2:262606/1‑93 (MQ=255)
gCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGt < 1:7179512/93‑1 (MQ=255)
aGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGTCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTaa > 1:2786574/1‑93 (MQ=255)
aGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTaa > 2:6786268/1‑93 (MQ=255)
cTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGaa < 2:5882360/93‑1 (MQ=255)
cTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGaa < 2:4704832/93‑1 (MQ=255)
tataTCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGaaa > 2:598563/1‑93 (MQ=255)
tataTCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGGAAATATGTGTTGCGGATATGCCAGCGATAATTTTGGTAAGata > 1:2896280/1‑91 (MQ=255)
atatCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAat > 1:685708/1‑93 (MQ=255)
tatCACTTACATGCGTACCGACTCCACTAGCCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAata < 1:7250175/93‑1 (MQ=255)
tatCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAata < 2:3387689/93‑1 (MQ=255)
tatCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAata < 2:4004887/93‑1 (MQ=255)
tatCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAata < 2:7534420/93‑1 (MQ=255)
tCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATc > 1:6659363/1‑93 (MQ=255)
cACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCt > 1:2390591/1‑93 (MQ=255)
aCTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTTGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTg < 2:2177503/93‑1 (MQ=255)
aCTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTg > 2:8511587/1‑93 (MQ=255)
ttACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTCTATCAGCGATAATTTTGGTAAGAAATATCTGcc > 1:842918/1‑93 (MQ=255)
ttACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCAGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGcc < 2:4257129/93‑1 (MQ=255)
tACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCg > 1:5748401/1‑93 (MQ=255)
tACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCg > 2:3745251/1‑93 (MQ=255)
tACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCg < 1:5201337/93‑1 (MQ=255)
aCATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCgg > 2:8552228/1‑93 (MQ=255)
cATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGa < 1:6604387/93‑1 (MQ=255)
cATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGa > 2:5761093/1‑93 (MQ=255)
aTGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGaa > 2:3223362/1‑93 (MQ=255)
tGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGaaa > 2:4194318/1‑93 (MQ=255)
tGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGaaa < 2:6644183/93‑1 (MQ=255)
tGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGaaa > 2:5932054/1‑93 (MQ=255)
gCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAg < 2:7468295/93‑1 (MQ=255)
gTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTc < 2:3271184/93‑1 (MQ=255)
gTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTc > 1:3420427/1‑93 (MQ=255)
gTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTc < 1:7675172/93‑1 (MQ=255)
gTACCGAATCCACTAACCTGAGTCAGGGAGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTc < 2:6344701/93‑1 (MQ=255)
tACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTcc < 2:273125/93‑1 (MQ=255)
aCCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCg < 2:3072277/93‑1 (MQ=255)
ccGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGa > 2:8812181/1‑93 (MQ=255)
cGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGaa > 1:1378626/1‑93 (MQ=255)
cGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGaa < 1:8510752/93‑1 (MQ=255)
ccACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATAAga > 1:7089075/1‑92 (MQ=255)
cACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTa > 1:4136451/1‑93 (MQ=255)
aCTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTAc > 2:1422005/1‑93 (MQ=255)
aCTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTAc < 2:8182529/93‑1 (MQ=255)
cTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACg > 1:1818908/1‑93 (MQ=255)
tAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGc < 2:785239/93‑1 (MQ=255)
tAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGc < 2:8342604/93‑1 (MQ=255)
aaCCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGcc > 1:6348690/1‑93 (MQ=255)
cTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGc > 2:1727762/1‑93 (MQ=255)
cTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGc < 1:8194992/93‑1 (MQ=255)
cTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGc > 1:739578/1‑93 (MQ=255)
aGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCaaa < 2:6716781/93‑1 (MQ=255)
aGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCaaa < 1:4589726/93‑1 (MQ=255)
gTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAg < 2:8308141/93‑1 (MQ=255)
gTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAg < 2:713765/93‑1 (MQ=255)
gTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAg < 2:2000212/93‑1 (MQ=255)
aGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGaaa > 1:1485277/1‑93 (MQ=255)
|
GCGTGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGACGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAA > NC_000913/1329970‑1330149
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGCGTGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGACGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAAACT > NC_000913/1329968‑1330152
|
TGGCGTGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGC < SRR4302541.6358246/94‑1 (MQ=60)
TGGCGTGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGC < SRR4302541.1444219/94‑1 (MQ=60)
GGTGAAAAAAACCATGATGATGGCGGAGCGTTTGTATGAAGCAGGCTATATCCCTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCG < SRR4302541.2898415/94‑1 (MQ=60)
GTGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGG > SRR4302541.2053476/1‑94 (MQ=60)
GTGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGG < SRR4302541.4265915/94‑1 (MQ=60)
TGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGT < SRR4302541.3603554/94‑1 (MQ=60)
TGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGT > SRR4302541.176990/1‑94 (MQ=60)
GGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGT < SRR4302541.2147349/94‑1 (MQ=60)
GAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTA > SRR4302541.7471137/1‑94 (MQ=60)
GAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTA < SRR4302541.2265761/94‑1 (MQ=60)
AAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAA > SRR4302541.718787/1‑94 (MQ=60)
AAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATAT > SRR4302541.3711029/1‑94 (MQ=60)
ACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGG < SRR4302541.7506486/94‑1 (MQ=60)
CCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGT < SRR4302541.3836894/94‑1 (MQ=60)
CCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGT < SRR4302541.3836896/94‑1 (MQ=60)
CCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGT > SRR4302541.5030340/1‑94 (MQ=60)
CATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTT > SRR4302541.363785/1‑94 (MQ=60)
ATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTC < SRR4302541.2660584/94‑1 (MQ=60)
ATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTC > SRR4302541.2483804/1‑94 (MQ=60)
ATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTC < SRR4302541.4123425/94‑1 (MQ=60)
TGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCG < SRR4302541.8106112/94‑1 (MQ=60)
GATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTTCACTAACCTGAGTCAGGGCGCGGTAAATATAGTTCGC > SRR4302541.6045547/1‑94 (MQ=60)
GATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGC < SRR4302541.6192310/94‑1 (MQ=60)
ATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCG < SRR4302541.3972209/94‑1 (MQ=60)
TGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGG > SRR4302541.5880473/1‑94 (MQ=60)
TGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGG > SRR4302541.684871/1‑94 (MQ=60)
TGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTAAGTCAGGGCGCGGGAAATATGGTTCGCGG > SRR4302541.5000618/1‑94 (MQ=60)
TGATGGCGCAGCGTTTGTATGAAGCAGGCTAGATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGG < SRR4302541.3340239/94‑1 (MQ=60)
GATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGT > SRR4302541.2585311/1‑94 (MQ=60)
GATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGT < SRR4302541.8479681/94‑1 (MQ=60)
TGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTA < SRR4302541.7229656/94‑1 (MQ=60)
GGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAGCCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTAT < SRR4302541.1054684/94‑1 (MQ=60)
GCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATA < SRR4302541.8641972/94‑1 (MQ=60)
GCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATA < SRR4302541.1566810/94‑1 (MQ=60)
CGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATAT > SRR4302541.954846/1‑94 (MQ=60)
CGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATAT > SRR4302541.8767035/1‑94 (MQ=60)
CGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATAT < SRR4302541.325081/94‑1 (MQ=60)
CGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATAT > SRR4302541.2298555/1‑94 (MQ=60)
CGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATAT > SRR4302541.1689086/1‑94 (MQ=60)
GCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGAGCGCGGTAAATATGGTTCGCGGGTATATC > SRR4302541.5813648/1‑94 (MQ=60)
CAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCA < SRR4302541.4103278/94‑1 (MQ=60)
CAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCA > SRR4302541.2045034/1‑94 (MQ=60)
CAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCA > SRR4302541.5080730/1‑94 (MQ=60)
CAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCA > SRR4302541.6001251/1‑94 (MQ=60)
CAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCA > SRR4302541.7664610/1‑94 (MQ=60)
AGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAG > SRR4302541.3255737/1‑94 (MQ=60)
AGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAG < SRR4302541.7922278/94‑1 (MQ=60)
AGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAG < SRR4302541.3444787/94‑1 (MQ=60)
AGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAG < SRR4302541.4427283/94‑1 (MQ=60)
AGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAG > SRR4302541.7632967/1‑94 (MQ=60)
AGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAG > SRR4302541.2639973/1‑94 (MQ=60)
GCGTTTGTATGAAGCAGGCTATATCACTTACGTGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGC < SRR4302541.4126482/94‑1 (MQ=60)
GCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGC > SRR4302541.8086610/1‑94 (MQ=60)
GCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGC < SRR4302541.4363097/94‑1 (MQ=60)
GCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGC > SRR4302541.7783646/1‑94 (MQ=60)
CGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCG > SRR4302541.3459711/1‑94 (MQ=60)
GTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGA < SRR4302541.2340100/94‑1 (MQ=60)
TTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGAT < SRR4302541.652344/94‑1 (MQ=60)
TTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATA < SRR4302541.3813370/94‑1 (MQ=60)
TTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATA < SRR4302541.2116095/94‑1 (MQ=60)
TTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATA < SRR4302541.4051677/94‑1 (MQ=60)
TTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATA < SRR4302541.3352801/94‑1 (MQ=60)
TTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATA > SRR4302541.6988415/1‑94 (MQ=60)
TGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAA > SRR4302541.1847174/1‑94 (MQ=60)
TGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAA < SRR4302541.5647804/94‑1 (MQ=60)
GTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAAT < SRR4302541.5911093/94‑1 (MQ=60)
GTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAAT < SRR4302541.5911092/94‑1 (MQ=60)
TATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATT < SRR4302541.7991280/94‑1 (MQ=60)
ATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGTCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTT > SRR4302541.2054320/1‑94 (MQ=60)
ATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTT > SRR4302541.4544141/1‑94 (MQ=60)
ATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTT < SRR4302541.2836974/94‑1 (MQ=60)
TGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTT < SRR4302541.6413953/94‑1 (MQ=60)
GAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTG < SRR4302541.3215561/94‑1 (MQ=60)
GAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTG > SRR4302541.2561507/1‑94 (MQ=60)
GAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTG > SRR4302541.1816955/1‑94 (MQ=60)
AGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGT < SRR4302541.4182758/94‑1 (MQ=60)
AGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGT < SRR4302541.2744771/94‑1 (MQ=60)
AGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGA > SRR4302541.5459443/1‑94 (MQ=60)
GCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTA < SRR4302541.7256092/94‑1 (MQ=60)
CAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGTCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAA > SRR4302541.2814682/1‑94 (MQ=60)
CAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGTCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAA > SRR4302541.2814681/1‑94 (MQ=60)
AGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAG < SRR4302541.610307/94‑1 (MQ=60)
AGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAG > SRR4302541.5626164/1‑94 (MQ=60)
AGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAG < SRR4302541.4170320/94‑1 (MQ=60)
AGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAG > SRR4302541.3250301/1‑94 (MQ=60)
AGGCTAAAACACTTACATGCGTACCGACTCCACTAAGCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAG < SRR4302541.2994357/94‑1 (MQ=60)
GGCTATATCACTTACATGCGTACCGACTCCATTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGA > SRR4302541.352831/1‑94 (MQ=60)
GGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGA > SRR4302541.830057/1‑94 (MQ=60)
GCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAA < SRR4302541.3126014/94‑1 (MQ=60)
CTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAA > SRR4302541.6367778/1‑94 (MQ=60)
CTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAA > SRR4302541.119334/1‑94 (MQ=60)
CTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGGAAATATGTGTTGCGGATATGCCAGCGATAATTTTGGTAAGATA > SRR4302541.2925385/1‑94 (MQ=60)
TATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAAT < SRR4302541.5661609/94‑1 (MQ=60)
TATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAAT > SRR4302541.692168/1‑94 (MQ=60)
ATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATA > SRR4302541.6991868/1‑94 (MQ=60)
TATCACTTACATGCGTACCGACTCCACTAGCCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATAT < SRR4302541.7327507/94‑1 (MQ=60)
TATCACTAACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATAT < SRR4302541.7284922/94‑1 (MQ=60)
ATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATC > SRR4302541.6727676/1‑94 (MQ=60)
ATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATC > SRR4302541.6727677/1‑94 (MQ=60)
ATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATC > SRR4302541.174288/1‑94 (MQ=60)
ATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATC > SRR4302541.6281416/1‑94 (MQ=60)
TCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCT < SRR4302541.7431723/94‑1 (MQ=60)
TCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCT > SRR4302541.2413983/1‑94 (MQ=60)
TCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCT < SRR4302541.7828936/94‑1 (MQ=60)
CACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTG < SRR4302541.7693638/94‑1 (MQ=60)
ACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTACATCAGCGATAATTTTGGTAAGAAATATCTGC > SRR4302541.590788/1‑94 (MQ=60)
CTTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTCTATCAGCGATAATTTTGGTAAGAAATATCTGCC > SRR4302541.850566/1‑94 (MQ=60)
TTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCG < SRR4302541.7473422/94‑1 (MQ=60)
TTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCG < SRR4302541.6835786/94‑1 (MQ=60)
TTACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCG > SRR4302541.5806934/1‑94 (MQ=60)
TACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGG < SRR4302541.5254899/94‑1 (MQ=60)
TACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGG > SRR4302541.4102378/1‑94 (MQ=60)
ACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGA > SRR4302541.8611715/1‑94 (MQ=60)
ACATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGA < SRR4302541.7969885/94‑1 (MQ=60)
CATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAA < SRR4302541.6672047/94‑1 (MQ=60)
CATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAA < SRR4302541.8600401/94‑1 (MQ=60)
ATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAA < SRR4302541.5726279/94‑1 (MQ=60)
ATGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAA > SRR4302541.6181540/1‑94 (MQ=60)
TGCGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAG < SRR4302541.6706040/94‑1 (MQ=60)
CGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTC > SRR4302541.648916/1‑94 (MQ=60)
CGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTC > SRR4302541.3454576/1‑94 (MQ=60)
CGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTC > SRR4302541.8522545/1‑94 (MQ=60)
CGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTC < SRR4302541.6998877/94‑1 (MQ=60)
CGTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTC > SRR4302541.4303405/1‑94 (MQ=60)
GTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCC < SRR4302541.7756774/94‑1 (MQ=60)
GTACCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCC < SRR4302541.2506274/94‑1 (MQ=60)
CCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAA > SRR4302541.1392175/1‑94 (MQ=60)
CCGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAA > SRR4302541.3413633/1‑94 (MQ=60)
CGGCTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAAT < SRR4302541.8602380/94‑1 (MQ=60)
CGACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAAT < SRR4302541.8602379/94‑1 (MQ=60)
GACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATC > SRR4302541.3254514/1‑94 (MQ=60)
GACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATC < SRR4302541.1458678/94‑1 (MQ=60)
GACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATC > SRR4302541.4722390/1‑94 (MQ=60)
GACTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATC < SRR4302541.2884828/94‑1 (MQ=60)
CTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAG > SRR4302541.4185640/1‑94 (MQ=60)
CTCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAG > SRR4302541.75413/1‑94 (MQ=60)
TCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATaaga > SRR4302541.7164493/1‑90 (MQ=60)
TCCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGT < SRR4302541.8091122/94‑1 (MQ=60)
CCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTA > SRR4302541.1469552/1‑94 (MQ=60)
CCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTA > SRR4302541.4177318/1‑94 (MQ=60)
CCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTA < SRR4302541.804305/94‑1 (MQ=60)
CCACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTA > SRR4302541.4177317/1‑94 (MQ=60)
ACTAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACG > SRR4302541.1836575/1‑94 (MQ=60)
TAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCC > SRR4302541.1174650/1‑94 (MQ=60)
TAACCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCC > SRR4302541.6413587/1‑94 (MQ=60)
CCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGC < SRR4302541.4901972/94‑1 (MQ=60)
CCTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGC > SRR4302541.746607/1‑94 (MQ=60)
CTGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCA < SRR4302541.8284429/94‑1 (MQ=60)
TGAGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAA > SRR4302541.4321328/1‑94 (MQ=60)
AGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAG < SRR4302541.159154/94‑1 (MQ=60)
AGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAG > SRR4302541.8546896/1‑94 (MQ=60)
AGTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAG < SRR4302541.4636260/94‑1 (MQ=60)
GTCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGA > SRR4302541.5032634/1‑94 (MQ=60)
GTCAGGGCGCGGTAAATATGGCTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGA < SRR4302541.7257025/94‑1 (MQ=60)
TCAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAA < SRR4302541.3335247/94‑1 (MQ=60)
CAGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAA > SRR4302541.1499890/1‑94 (MQ=60)
AGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAAA > SRR4302541.3323325/1‑94 (MQ=60)
AGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAAA > SRR4302541.8899116/1‑94 (MQ=60)
AGGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAAA > SRR4302541.1032181/1‑94 (MQ=60)
GGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAAAC > SRR4302541.4188786/1‑94 (MQ=60)
GGGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAAAC > SRR4302541.4188782/1‑94 (MQ=60)
GGCGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAAACT > SRR4302541.5909554/1‑94 (MQ=60)
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TGGCGTGAAAAAAACCATGATGATGGCGCAGCGTTTGTATGAAGCAGGCTATATCACTTACATGCGTACCGACTCCACTAACCTGAGTCAGGACGCGGTAAATATGGTTCGCGGTTATATCAGCGATAATTTTGGTAAGAAATATCTGCCGGAAAGTCCGAATCAGTACGCCAGCAAAGAAAACT > NC_000913/1329968‑1330152
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
