Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,957,551 +T intergenic (‑120/‑741) ppiC ← / → rep peptidyl‑prolyl cis‑trans isomerase C/rep helicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,957,5501.T98.7% 1356.4 / 6.5 386intergenic (‑119/‑742)ppiC/reppeptidyl‑prolyl cis‑trans isomerase C/rep helicase
Reads supporting (aligned to +/- strand):  ref base . (2/3);  new base T (186/194);  total (188/198)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 398 total aligned reads displayed.

AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑G‑‑C‑TCGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT  >  NC_000913/3957471‑3957627
                                                                                     |                                                                              
aGCATGTTCCGCAGATGCTAACGTAATGGTCAGTCAGAGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGT‑ccc                                                                    <  2:4130043/93‑2 (MQ=255)
aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCAGGT‑ccc                                                                    <  2:4340237/93‑2 (MQ=255)
 gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGT‑ccct                                                                   >  1:8051371/1‑91 (MQ=255)
  cATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGT‑ccctc                                                                  >  1:596713/1‑90 (MQ=255)
   aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGT‑ccctca                                                                 >  2:1578080/1‑89 (MQ=255)
     gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATTTGGTCAAATTCCGGAAAAT‑CC‑G‑GGCC‑TCGCAGGTCCCTCAAg                                                                >  1:7511090/1‑93 (MQ=255)
      aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAgg                                                               <  2:7552567/93‑1 (MQ=255)
      aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAgg                                                               >  1:4575869/1‑93 (MQ=255)
       tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAggg                                                              <  1:669366/93‑1 (MQ=255)
       tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAggg                                                              <  1:5545829/93‑1 (MQ=255)
       tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAG‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAggg                                                              <  1:8379014/93‑1 (MQ=255)
         cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAggggg                                                            >  2:5430005/1‑92 (MQ=255)
         cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGga                                                            <  1:5270592/93‑1 (MQ=255)
         cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGga                                                            <  2:5241092/93‑1 (MQ=255)
           cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGGCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGgaga                                                          >  1:4038440/1‑93 (MQ=255)
           cAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGCAAATACG‑G‑G‑‑CTTCGCAGGTCCCTCAAGGGgaga                                                          >  1:3171142/1‑93 (MQ=255)
            aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGaa                                                         <  1:3895309/93‑1 (MQ=255)
            aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGaa                                                         <  1:8657198/93‑1 (MQ=255)
            aGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGAGAGaa                                                         >  2:3465376/1‑93 (MQ=255)
              aTGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGaaaa                                                       >  2:6295246/1‑93 (MQ=255)
               tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGGGAAAAc                                                      >  1:2226918/1‑93 (MQ=255)
                gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACt                                                     <  2:3668587/93‑1 (MQ=255)
                gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACt                                                     >  1:7424955/1‑93 (MQ=255)
                 cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACtt                                                    >  1:2396789/1‑93 (MQ=255)
                 cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACtt                                                    >  1:4219559/1‑93 (MQ=255)
                  tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTa                                                   <  2:6143838/93‑1 (MQ=255)
                  tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTa                                                   >  1:3261218/1‑93 (MQ=255)
                   aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAg                                                  <  1:5898310/93‑1 (MQ=255)
                   aaCGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGACCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAg                                                  >  2:8254528/1‑93 (MQ=255)
                     cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAggg                                                >  2:5057567/1‑93 (MQ=255)
                     cGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCAG‑G‑‑CTTCGCAGGTCCCTCAAGGTGAGAAAACTTAggg                                                <  2:7044101/93‑1 (MQ=255)
                        aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCct                                             >  2:2549192/1‑93 (MQ=255)
                         aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCctc                                            >  2:3423278/1‑93 (MQ=255)
                         aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCctc                                            >  1:8585381/1‑93 (MQ=255)
                          ttGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCctct                                           <  1:6319136/93‑1 (MQ=255)
                           tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTa                                          <  2:2191468/93‑1 (MQ=255)
                            gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt                                         <  1:1474198/93‑1 (MQ=255)
                            gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAt                                         <  2:8787827/93‑1 (MQ=255)
                             tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGTCCTCTATg                                        >  2:6689247/1‑93 (MQ=255)
                             tcagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg                                        <  2:2923238/93‑1 (MQ=255)
                             tcagtcagGGAGTGGCTGGGACATATATGGCAAAAGACCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATg                                        >  1:8258940/1‑93 (MQ=255)
                              cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg                                       <  1:1013926/93‑1 (MQ=255)
                              cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg                                       <  1:3741608/93‑1 (MQ=255)
                              cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg                                       <  2:3221729/93‑1 (MQ=255)
                              cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg                                       <  2:1985048/93‑1 (MQ=255)
                              cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATgg                                       >  1:966533/1‑93 (MQ=255)
                                gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc                                     <  1:6444135/93‑1 (MQ=255)
                                gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc                                     >  2:2353542/1‑93 (MQ=255)
                                gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc                                     >  1:1283852/1‑93 (MQ=255)
                                gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc                                     <  2:6455451/93‑1 (MQ=255)
                                gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGc                                     >  1:7220846/1‑93 (MQ=255)
                                 tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt                                    <  1:2066997/93‑1 (MQ=255)
                                 tcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt                                    >  2:1925531/1‑93 (MQ=255)
                                 tcagGGAGTGGCTGGTACATATATGGCAAAAAGCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt                                    >  1:1125461/1‑93 (MQ=255)
                                   agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                  <  1:7003843/93‑1 (MQ=255)
                                   agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                  >  1:8753836/1‑93 (MQ=255)
                                   agGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                  <  1:5730934/93‑1 (MQ=255)
                                    gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa                                 >  1:476068/1‑93 (MQ=255)
                                    gggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGAAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa                                 >  1:6239795/1‑93 (MQ=255)
                                     ggAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACaa                                >  1:5019255/1‑93 (MQ=255)
                                        gTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt                             >  2:5670547/1‑93 (MQ=255)
                                        gTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt                             >  1:679976/1‑93 (MQ=255)
                                         tGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc                            >  1:364568/1‑93 (MQ=255)
                                          ggCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa                           <  1:5452531/93‑1 (MQ=255)
                                            cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                         >  1:5361164/1‑93 (MQ=255)
                                            cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                         >  1:3447248/1‑93 (MQ=255)
                                            cTGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                         <  2:4567969/93‑1 (MQ=255)
                                             tGGTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTa                        >  2:7323116/1‑93 (MQ=255)
                                              ggTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                       <  2:8126945/93‑1 (MQ=255)
                                               gTACATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc                      >  2:474864/1‑93 (MQ=255)
                                               gTACATATATGGCAAAAGCCCGGAAAAT‑CC‑GGG‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc                      >  2:2657077/1‑93 (MQ=255)
                                               gTACATATATGGCAAAAGCCCGGAAAAT‑CC‑G‑GGCC‑TTGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc                      <  1:2866161/93‑1 (MQ=255)
                                                 agatatagGGCAAAAGCCCGGAAAAG‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGATACAAAGTCATTATCgg                    <  2:1330915/91‑1 (MQ=255)
                                                 aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAtgtg                    >  1:7404719/1‑90 (MQ=255)
                                                 aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg                    >  2:7889280/1‑93 (MQ=255)
                                                 aCATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg                    <  1:1773173/93‑1 (MQ=255)
                                                  cATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                   <  1:8446559/93‑1 (MQ=255)
                                                  cATATATGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                   >  2:1667743/1‑93 (MQ=255)
                                                   atatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgggg                  <  1:6750624/93‑1 (MQ=255)
                                                    tatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa                 >  2:1832894/1‑93 (MQ=255)
                                                    tatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGa                 <  1:2591667/93‑1 (MQ=255)
                                                    tatatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTAATTATCGGGGa                 <  2:3893719/93‑1 (MQ=255)
                                                     atatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt                >  2:229147/1‑93 (MQ=255)
                                                      tatGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATg               <  2:1263398/93‑1 (MQ=255)
                                                       atGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg              >  2:6761024/1‑93 (MQ=255)
                                                        tGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt             <  1:4631334/93‑1 (MQ=255)
                                                        tGGCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt             <  2:592767/93‑1 (MQ=255)
                                                          gCAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta           >  2:855583/1‑93 (MQ=255)
                                                           cAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat          <  1:5209838/93‑1 (MQ=255)
                                                           cAAAAGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat          <  2:7757327/93‑1 (MQ=255)
                                                            aaaaGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt         >  2:1086230/1‑93 (MQ=255)
                                                              aaGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt       >  1:3050967/1‑93 (MQ=255)
                                                              aaGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt       <  1:6111305/93‑1 (MQ=255)
                                                               aGCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttta      >  2:5782984/1‑93 (MQ=255)
                                                                gCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat     >  1:1907403/1‑93 (MQ=255)
                                                                gCCCGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat     >  1:2737125/1‑93 (MQ=255)
                                                                 cccGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt    >  2:3537218/1‑93 (MQ=255)
                                                                 cccGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt    <  1:76939/93‑1 (MQ=255)
                                                                 cccGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt    <  1:4416062/93‑1 (MQ=255)
                                                                 cccGGAAAAT‑CCGG‑G‑‑CTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt    >  1:7820558/1‑93 (MQ=255)
                                                                                     |                                                                              
AGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAAT‑CC‑T‑G‑‑C‑TCGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT  >  NC_000913/3957471‑3957627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 257 total aligned reads displayed.
TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑TG‑‑CTCGCA‑GG‑T‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGA  >  NC_000913/3957478‑3957641
                                                                             |                                                                                              
TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGG                                                                           <  SRR4302541.5602609/94‑1 (MQ=60)
  CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAG                                                                         <  SRR4302541.5324890/94‑1 (MQ=60)
  CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAG                                                                         <  SRR4302541.5324888/94‑1 (MQ=60)
  CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAG                                                                         <  SRR4302541.4645458/94‑1 (MQ=60)
   GCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGGCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGA                                                                        >  SRR4302541.4078324/1‑94 (MQ=60)
   GCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGA                                                                        >  SRR4302541.8100760/1‑94 (MQ=60)
   GCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGA                                                                        <  SRR4302541.3094312/94‑1 (MQ=60)
   GCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGCAAATAC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGA                                                                        >  SRR4302541.3203187/1‑94 (MQ=60)
   GCAGATGCTAACGTAATTATCAGTCAGGGAGGGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGA                                                                        >  SRR4302541.5964077/1‑94 (MQ=60)
    CAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAA                                                                       >  SRR4302541.5638567/1‑94 (MQ=60)
     AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCCAGGGGAGAAA                                                                      >  SRR4302541.6821357/1‑94 (MQ=60)
     AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAA                                                                      <  SRR4302541.3653487/94‑1 (MQ=60)
     AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAA                                                                      <  SRR4302541.3934323/94‑1 (MQ=60)
     AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAA                                                                      >  SRR4302541.945503/1‑94 (MQ=60)
     AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAA                                                                      <  SRR4302541.8749877/94‑1 (MQ=60)
       ATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGGGAAAAC                                                                    >  SRR4302541.2248495/1‑94 (MQ=60)
         GCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTT                                                                  >  SRR4302541.4261553/1‑94 (MQ=60)
         GCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTT                                                                  >  SRR4302541.2420263/1‑94 (MQ=60)
         GCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTT                                                                  <  SRR4302541.974689/94‑1 (MQ=60)
          CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCCGGGG‑‑TTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTG                                                                 >  SRR4302541.2980889/1‑94 (MQ=60)
          CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTA                                                                 <  SRR4302541.1834021/94‑1 (MQ=60)
          CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTA                                                                 >  SRR4302541.3307123/1‑94 (MQ=60)
          CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTA                                                                 <  SRR4302541.2092101/94‑1 (MQ=60)
          CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑CGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTA                                                                 >  SRR4302541.5306604/1‑94 (MQ=60)
           TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAG                                                                <  SRR4302541.1694462/94‑1 (MQ=60)
            TACGTAATTGTCAGTCAGGGAGAGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGG                                                               <  SRR4302541.6788856/94‑1 (MQ=60)
            AACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGG                                                               <  SRR4302541.5958340/94‑1 (MQ=60)
             ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGG                                                              <  SRR4302541.8513026/94‑1 (MQ=60)
             ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGG                                                              <  SRR4302541.128416/94‑1 (MQ=60)
             ACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGG                                                              >  SRR4302541.8003312/1‑94 (MQ=60)
              CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGC                                                             >  SRR4302541.373880/1‑94 (MQ=60)
               GTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCC                                                            <  SRR4302541.628991/94‑1 (MQ=60)
               GTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGGAAAAGACCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAAagtaggggc                                                            >  SRR4302541.5189570/1‑85 (MQ=41)
               GTAATTGTCAGGCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCC                                                            <  SRR4302541.4971939/94‑1 (MQ=60)
                TAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCT                                                           <  SRR4302541.6570889/94‑1 (MQ=60)
                TAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCT                                                           >  SRR4302541.3827012/1‑94 (MQ=60)
                TAATGTTCAGTCAGGGGGTGGTTGGTAAATATATGGCAAAAGCCCGGAAATTCC‑‑GGGTTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCT                                                           <  SRR4302541.1635005/94‑1 (MQ=34)
                 AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGGAAATCC‑‑GGGCTTCGCAGGG‑C‑C‑CTCAAGGGGAGAAAACTTAGGGCCTC                                                          >  SRR4302541.4187119/1‑94 (MQ=60)
                 AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTC                                                          >  SRR4302541.8677537/1‑94 (MQ=60)
                 AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTC                                                          >  SRR4302541.8303101/1‑94 (MQ=60)
                 AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTC                                                          <  SRR4302541.6047586/94‑1 (MQ=60)
                  ATTGTCAGTCAGGGAGTGGCTGGTACCTATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT                                                         >  SRR4302541.5457245/1‑94 (MQ=60)
                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT                                                         <  SRR4302541.7589643/94‑1 (MQ=60)
                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT                                                         >  SRR4302541.2627567/1‑94 (MQ=60)
                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT                                                         <  SRR4302541.2557537/94‑1 (MQ=60)
                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT                                                         <  SRR4302541.2486207/94‑1 (MQ=60)
                  ATTGTCAGGCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCT                                                         <  SRR4302541.2723088/94‑1 (MQ=60)
                   TTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTA                                                        >  SRR4302541.1897657/1‑94 (MQ=60)
                   TTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTA                                                        <  SRR4302541.6383741/94‑1 (MQ=60)
                     GTGAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                      <  SRR4302541.1488661/94‑1 (MQ=60)
                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCCAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAAGGGGGAAAACTTAGGGCCTCTATG                                                      >  SRR4302541.6442448/1‑94 (MQ=57)
                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGGCCGGGAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                      >  SRR4302541.4757882/1‑94 (MQ=60)
                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                      <  SRR4302541.1488662/94‑1 (MQ=60)
                     GTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGACCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                      >  SRR4302541.8348871/1‑94 (MQ=60)
                      TCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGG                                                     <  SRR4302541.6685916/94‑1 (MQ=60)
                      TCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGG                                                     >  SRR4302541.975612/1‑94 (MQ=60)
                       CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGG                                                    <  SRR4302541.3779264/94‑1 (MQ=60)
                       CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGG                                                    <  SRR4302541.1023301/94‑1 (MQ=60)
                        AGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGC                                                   <  SRR4302541.2207013/94‑1 (MQ=60)
                        AGTCAGGGAGTGGCTGGTACATATATGGCAAAAGACCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGC                                                   >  SRR4302541.3796931/1‑94 (MQ=60)
                         GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT                                                  <  SRR4302541.6509814/94‑1 (MQ=60)
                         GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT                                                  <  SRR4302541.6201468/94‑1 (MQ=60)
                         GTCAGGGAGTGGCTGGTACATATATGGCAAAAAGCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT                                                  >  SRR4302541.1136079/1‑94 (MQ=60)
                          TCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA                                                 >  SRR4302541.4887822/1‑94 (MQ=60)
                          TCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA                                                 <  SRR4302541.2891444/94‑1 (MQ=60)
                          TCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA                                                 <  SRR4302541.4564505/94‑1 (MQ=60)
                          TCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA                                                 <  SRR4302541.2086966/94‑1 (MQ=60)
                          TCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA                                                 >  SRR4302541.6018350/1‑94 (MQ=60)
                           CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                >  SRR4302541.1105251/1‑94 (MQ=60)
                           CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                >  SRR4302541.8847480/1‑94 (MQ=60)
                           CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                >  SRR4302541.2339463/1‑94 (MQ=60)
                           CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                >  SRR4302541.5519657/1‑94 (MQ=60)
                            AGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA                                               >  SRR4302541.480585/1‑94 (MQ=60)
                            AGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA                                               <  SRR4302541.5789352/94‑1 (MQ=60)
                            AGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA                                               >  SRR4302541.6848802/1‑94 (MQ=60)
                            AGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA                                               >  SRR4302541.8400286/1‑94 (MQ=60)
                            AGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA                                               <  SRR4302541.7078361/94‑1 (MQ=60)
                            AGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA                                               <  SRR4302541.7218996/94‑1 (MQ=60)
                            AGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGAA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACA                                               >  SRR4302541.6303547/1‑94 (MQ=60)
                             GGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAA                                              >  SRR4302541.5070860/1‑94 (MQ=60)
                              GGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAA                                             >  SRR4302541.5836106/1‑94 (MQ=60)
                              GGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAA                                             >  SRR4302541.6332669/1‑94 (MQ=60)
                               GAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAG                                            >  SRR4302541.2934079/1‑94 (MQ=60)
                               GAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAG                                            <  SRR4302541.5460418/94‑1 (MQ=60)
                               GAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAG                                            <  SRR4302541.8694902/94‑1 (MQ=60)
                               GAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAG                                            <  SRR4302541.874374/94‑1 (MQ=60)
                                AGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGT                                           >  SRR4302541.686392/1‑94 (MQ=60)
                                 GTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTC                                          <  SRR4302541.138061/94‑1 (MQ=60)
                                 GTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTC                                          >  SRR4302541.367882/1‑94 (MQ=60)
                                   GGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAT                                        <  SRR4302541.2886751/94‑1 (MQ=60)
                                    GCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATT                                       <  SRR4302541.4186977/94‑1 (MQ=60)
                                    GCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATT                                       <  SRR4302541.5336394/94‑1 (MQ=60)
                                     CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAACCTTAGGGCCTCTATGGGCTACAAAGTCATTA                                      <  SRR4302541.4461879/94‑1 (MQ=60)
                                     CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                      >  SRR4302541.5786443/1‑94 (MQ=60)
                                     CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                      <  SRR4302541.3343400/94‑1 (MQ=60)
                                     CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                      <  SRR4302541.327328/94‑1 (MQ=60)
                                      TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                     <  SRR4302541.711348/94‑1 (MQ=60)
                                      TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                     >  SRR4302541.401731/1‑94 (MQ=60)
                                      TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                     <  SRR4302541.5540072/94‑1 (MQ=60)
                                      TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                     >  SRR4302541.4386177/1‑94 (MQ=60)
                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                    <  SRR4302541.1956619/94‑1 (MQ=60)
                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                    <  SRR4302541.7473498/94‑1 (MQ=60)
                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                    <  SRR4302541.2054555/94‑1 (MQ=60)
                                        GTACATATATGGCAAAAGCCCGGAAAGTCC‑‑GGGCTTCGCA‑GG‑T‑CTCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG                                   <  SRR4302541.3268453/94‑1 (MQ=60)
                                        GTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG                                   >  SRR4302541.6852058/1‑94 (MQ=60)
                                        GTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG                                   <  SRR4302541.3077417/94‑1 (MQ=60)
                                        GTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG                                   >  SRR4302541.5536674/1‑94 (MQ=60)
                                        GTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCGTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG                                   <  SRR4302541.2835988/94‑1 (MQ=60)
                                         TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATgtg                                  >  SRR4302541.7483915/1‑91 (MQ=60)
                                         TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                                  <  SRR4302541.5826395/94‑1 (MQ=60)
                                         TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                                  >  SRR4302541.3979756/1‑94 (MQ=60)
                                          ACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                 <  SRR4302541.3761223/94‑1 (MQ=60)
                                          ACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                 <  SRR4302541.7522660/94‑1 (MQ=60)
                                          ACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                 <  SRR4302541.2691402/94‑1 (MQ=60)
                                          ACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                 <  SRR4302541.1790404/94‑1 (MQ=60)
                                           CATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                                <  SRR4302541.1102061/94‑1 (MQ=60)
                                           CATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                                <  SRR4302541.8537753/94‑1 (MQ=60)
                                            ATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                               >  SRR4302541.6933469/1‑94 (MQ=60)
                                            ATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                               <  SRR4302541.438249/94‑1 (MQ=60)
                                            ATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                               <  SRR4302541.7779240/94‑1 (MQ=60)
                                            ATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                               <  SRR4302541.6822785/94‑1 (MQ=60)
                                            ATATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                               <  SRR4302541.6822786/94‑1 (MQ=60)
                                              ATATGGCAAAGGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG                             <  SRR4302541.3618185/94‑1 (MQ=60)
                                              ATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG                             >  SRR4302541.51263/1‑94 (MQ=60)
                                              ATATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG                             <  SRR4302541.1221069/94‑1 (MQ=60)
                                               TATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGG                            >  SRR4302541.3941558/1‑94 (MQ=60)
                                               TATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGG                            <  SRR4302541.8381829/94‑1 (MQ=60)
                                                ATGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGT                           >  SRR4302541.6442071/1‑94 (MQ=60)
                                                 TGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GGCC‑C‑CTCAAGGGGAGAAAACCTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTT                          >  SRR4302541.7873761/1‑94 (MQ=60)
                                                 TGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTT                          <  SRR4302541.4678457/94‑1 (MQ=60)
                                                 TGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTT                          >  SRR4302541.7490328/1‑94 (MQ=60)
                                                 TGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTT                          <  SRR4302541.8655542/94‑1 (MQ=60)
                                                 TGGCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTT                          >  SRR4302541.1987065/1‑94 (MQ=60)
                                                   GCAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGGTAT                        >  SRR4302541.5445522/1‑94 (MQ=60)
                                                    CAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                       >  SRR4302541.5294973/1‑94 (MQ=60)
                                                    CAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                       <  SRR4302541.5263512/94‑1 (MQ=60)
                                                    CAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                       <  SRR4302541.5263513/94‑1 (MQ=60)
                                                    CAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                       >  SRR4302541.3925673/1‑94 (MQ=60)
                                                    CAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                       >  SRR4302541.7696577/1‑94 (MQ=60)
                                                    CAAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                       <  SRR4302541.8765066/94‑1 (MQ=60)
                                                     AAAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTT                      >  SRR4302541.4701765/1‑94 (MQ=60)
                                                      AAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GGTT‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT                     <  SRR4302541.744472/94‑1 (MQ=60)
                                                      AAAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTT                     <  SRR4302541.744473/94‑1 (MQ=60)
                                                       AAGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTA                    >  SRR4302541.117714/1‑94 (MQ=60)
                                                        AGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTAT                   >  SRR4302541.1925734/1‑94 (MQ=60)
                                                        AGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTAT                   <  SRR4302541.5163707/94‑1 (MQ=60)
                                                        AGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTAT                   >  SRR4302541.8673082/1‑94 (MQ=60)
                                                        AGCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTAT                   >  SRR4302541.8673081/1‑94 (MQ=60)
                                                         aggcccgcaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTA                    <  SRR4302541.6173715/74‑1 (MQ=60)
                                                         GCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATT                  >  SRR4302541.7905363/1‑94 (MQ=60)
                                                         GCCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATT                  <  SRR4302541.3105014/94‑1 (MQ=60)
                                                          CCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTT                 >  SRR4302541.4897116/1‑94 (MQ=60)
                                                          CCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG                 <  SRR4302541.3608978/94‑1 (MQ=60)
                                                          CCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG                 <  SRR4302541.6193412/94‑1 (MQ=60)
                                                          CCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG                 <  SRR4302541.2403760/94‑1 (MQ=60)
                                                          CCCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG                 <  SRR4302541.77601/94‑1 (MQ=60)
                                                           CCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT                <  SRR4302541.8274887/94‑1 (MQ=60)
                                                           CCGGAAAATCC‑‑GGGCTTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT                >  SRR4302541.3270944/1‑94 (MQ=60)
                                                              cggaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGCTGGTTATTTTATTGTA               >  SRR4302541.6573049/16‑94 (MQ=60)
                                                              cggaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTC               >  SRR4302541.6373508/16‑94 (MQ=60)
                                                              cggaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTC               >  SRR4302541.8908300/16‑94 (MQ=60)
                                                              cggaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTC               <  SRR4302541.7487264/79‑1 (MQ=60)
                                                              cggaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTC               >  SRR4302541.41265/16‑94 (MQ=60)
                                                              cggaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTC               >  SRR4302541.538229/16‑94 (MQ=60)
                                                              cggaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTC               >  SRR4302541.240616/16‑94 (MQ=60)
                                                               ggaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCA              >  SRR4302541.8245201/15‑94 (MQ=60)
                                                               ggaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCA              >  SRR4302541.101729/15‑94 (MQ=60)
                                                               ggaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCA              >  SRR4302541.1411013/15‑94 (MQ=60)
                                                               ggaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCA              >  SRR4302541.1736714/15‑94 (MQ=60)
                                                               cgaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCA              <  SRR4302541.6372289/80‑1 (MQ=60)
                                                                gaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAA             <  SRR4302541.4380565/81‑1 (MQ=60)
                                                                gaaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAA             <  SRR4302541.5352152/81‑1 (MQ=60)
                                                                 aaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT            <  SRR4302541.435702/82‑1 (MQ=60)
                                                                 aaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT            >  SRR4302541.7500942/13‑94 (MQ=60)
                                                                 aaaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT            <  SRR4302541.568663/82‑1 (MQ=60)
                                                                  aaatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATT           <  SRR4302541.5732874/83‑1 (MQ=60)
                                                                   attccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT          <  SRR4302541.7780085/84‑1 (MQ=60)
                                                                   actccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT          <  SRR4302541.3162172/84‑1 (MQ=60)
                                                                   aatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT          >  SRR4302541.7239605/11‑94 (MQ=60)
                                                                   aatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT          <  SRR4302541.1838022/84‑1 (MQ=60)
                                                                   aatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT          <  SRR4302541.2590631/84‑1 (MQ=60)
                                                                   aatccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGATATTTTATTGTCAATTT          >  SRR4302541.7239604/11‑94 (MQ=60)
                                                                    atccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCCACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA         >  SRR4302541.3061983/10‑94 (MQ=60)
                                                                     accgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTAT        <  SRR4302541.7063672/86‑1 (MQ=60)
                                                                      ccgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCTATTTATA       >  SRR4302541.8904170/8‑94 (MQ=60)
                                                                       cgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA      >  SRR4302541.7887659/7‑94 (MQ=60)
                                                                       cgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA      <  SRR4302541.2650897/88‑1 (MQ=60)
                                                                       cgggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA      <  SRR4302541.7688857/88‑1 (MQ=60)
                                                                        gggctTCGCA‑GG‑TCC‑CTCAATGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG     <  SRR4302541.5448706/89‑1 (MQ=60)
                                                                        gggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG     >  SRR4302541.3365157/6‑94 (MQ=60)
                                                                        gggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG     <  SRR4302541.3841226/89‑1 (MQ=60)
                                                                        gggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG     <  SRR4302541.3558181/89‑1 (MQ=60)
                                                                        gggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG     <  SRR4302541.2319470/89‑1 (MQ=60)
                                                                        gggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG     >  SRR4302541.8544936/6‑94 (MQ=60)
                                                                         ggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGC    >  SRR4302541.1412734/5‑94 (MQ=60)
                                                                         ggctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGC    >  SRR4302541.1467605/5‑94 (MQ=60)
                                                                          gctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCG   <  SRR4302541.4752658/91‑1 (MQ=60)
                                                                          gctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCG   <  SRR4302541.1472482/91‑1 (MQ=60)
                                                                           ctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTCTTTTATTGTCAATTTATGAGCGA  >  SRR4302541.5623607/3‑94 (MQ=60)
                                                                           ctTCGCA‑GG‑TCC‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGA  <  SRR4302541.2039789/92‑1 (MQ=60)
                                                                             |                                                                                              
TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑TG‑‑CTCGCA‑GG‑T‑C‑CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGA  >  NC_000913/3957478‑3957641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑