Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 744 338.8 17650688 97.8% 17262372 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCGGATACTACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTACGGGG  >  NC_000913/997388‑997573
                                                                                             |                                                                                            
GCGGATACTACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAG                                                                                              <  SRR4302541.2053598/94‑1 (MQ=60)
GCGGATACTACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAA                                                                                              <  SRR4302541.7974994/94‑1 (MQ=60)
 CCGATACTACTCAGATTACAGCGTTTGCTAACCAGGCCCCATCTGATGCTACTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGC                                                                                             <  SRR4302541.6010862/94‑1 (MQ=60)
  GGATACTACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCG                                                                                            <  SRR4302541.4507690/94‑1 (MQ=60)
     TACTACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCC                                                                                         <  SRR4302541.7761949/94‑1 (MQ=60)
      ACTACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCA                                                                                        <  SRR4302541.3669891/94‑1 (MQ=60)
       CTACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCAT                                                                                       <  SRR4302541.1262285/94‑1 (MQ=60)
        TACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATC                                                                                      >  SRR4302541.7020785/1‑94 (MQ=60)
        TACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATC                                                                                      <  SRR4302541.2069076/94‑1 (MQ=60)
        TACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATC                                                                                      <  SRR4302541.4911097/94‑1 (MQ=60)
         ACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCA                                                                                     <  SRR4302541.453338/94‑1 (MQ=60)
          CTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCAC                                                                                    <  SRR4302541.6099036/94‑1 (MQ=60)
          CTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCAC                                                                                    >  SRR4302541.6880700/1‑94 (MQ=60)
           TCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACG                                                                                   >  SRR4302541.2249838/1‑94 (MQ=60)
             atataACAGCGTTTGCTAACCAGGCCTCATCGGATGCTTCTACAAACGTGCCCCTGCAAATTTATATGAATGACCGTACAACGGCCATCACGCC                                                                                 <  SRR4302541.5790413/89‑1 (MQ=60)
             AGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCC                                                                                 >  SRR4302541.4823977/1‑94 (MQ=60)
             AGATTACAGCGTTTGCTAACCAGGCATCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCC                                                                                 <  SRR4302541.1311041/94‑1 (MQ=60)
             AGATTACAGCGGTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCC                                                                                 <  SRR4302541.5268916/94‑1 (MQ=60)
              GATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCA                                                                                >  SRR4302541.4296470/1‑94 (MQ=60)
                TTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGA                                                                              <  SRR4302541.3389168/94‑1 (MQ=60)
                 TACAGCGTTTTCTAACCAGGCCTCATCTGAGGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGAC                                                                             <  SRR4302541.3104331/94‑1 (MQ=60)
                 TACAGCGTTTGCTAACCAGGGCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGAC                                                                             <  SRR4302541.8622146/94‑1 (MQ=60)
                  ACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACA                                                                            <  SRR4302541.2950219/94‑1 (MQ=60)
                      CGTTTTCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGA                                                                        <  SRR4302541.5821619/94‑1 (MQ=60)
                        TTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAA                                                                      >  SRR4302541.5597620/1‑94 (MQ=60)
                          tacgaagcagccccCATCTGATGCTCCTACAATCGTGGCCATGGATATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACC                                                                    <  SRR4302541.5129698/80‑1 (MQ=60)
                          TGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACC                                                                    <  SRR4302541.3911029/94‑1 (MQ=60)
                             TAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGG                                                                 >  SRR4302541.6112015/1‑94 (MQ=60)
                             TAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGG                                                                 <  SRR4302541.39545/94‑1 (MQ=60)
                              AACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGA                                                                <  SRR4302541.7075748/94‑1 (MQ=60)
                                 CAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACA                                                             <  SRR4302541.7530032/94‑1 (MQ=60)
                                     CCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTT                                                         >  SRR4302541.2695740/1‑94 (MQ=60)
                                     CCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTT                                                         >  SRR4302541.8435058/1‑94 (MQ=60)
                                      CTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTG                                                        <  SRR4302541.8818550/94‑1 (MQ=60)
                                      CTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTG                                                        <  SRR4302541.1699742/94‑1 (MQ=60)
                                       TCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGT                                                       >  SRR4302541.3280955/1‑94 (MQ=60)
                                         ATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTG                                                     >  SRR4302541.4107896/1‑94 (MQ=60)
                                         ATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTG                                                     <  SRR4302541.3966175/94‑1 (MQ=60)
                                          TCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGC                                                    <  SRR4302541.7154323/94‑1 (MQ=60)
                                             GATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGG                                                 <  SRR4302541.6409561/94‑1 (MQ=60)
                                               TGTTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGAT                                               <  SRR4302541.7132522/94‑1 (MQ=60)
                                                GCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATTGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATG                                              <  SRR4302541.3565653/94‑1 (MQ=60)
                                                GCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATG                                              <  SRR4302541.1116752/94‑1 (MQ=60)
                                                GCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATG                                              <  SRR4302541.7261774/94‑1 (MQ=60)
                                                 CTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGG                                             >  SRR4302541.7047779/1‑94 (MQ=60)
                                                   GCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAG                                           <  SRR4302541.3849287/94‑1 (MQ=60)
                                                   GCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAG                                           >  SRR4302541.4396118/1‑94 (MQ=60)
                                                     TACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGAT                                         <  SRR4302541.6016483/94‑1 (MQ=60)
                                                      ACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATC                                        <  SRR4302541.8097105/94‑1 (MQ=60)
                                                       CAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCA                                       <  SRR4302541.6116114/94‑1 (MQ=60)
                                                       CAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCA                                       <  SRR4302541.3024592/94‑1 (MQ=60)
                                                         AACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGA                                     <  SRR4302541.7050773/94‑1 (MQ=60)
                                                         AACGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGA                                     <  SRR4302541.3524687/94‑1 (MQ=60)
                                                         AACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGA                                     <  SRR4302541.8107324/94‑1 (MQ=60)
                                                           CGTGGCCCTGCAAATGTATATGTATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACG                                   <  SRR4302541.3082813/94‑1 (MQ=60)
                                                           CGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACG                                   <  SRR4302541.7750327/94‑1 (MQ=60)
                                                           CGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACG                                   <  SRR4302541.557950/94‑1 (MQ=60)
                                                           CGTGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACG                                   >  SRR4302541.4130381/1‑94 (MQ=60)
                                                           CGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACG                                   <  SRR4302541.6862092/94‑1 (MQ=60)
                                                           CGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACG                                   <  SRR4302541.151318/94‑1 (MQ=60)
                                                            GTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGT                                  >  SRR4302541.7826322/1‑94 (MQ=60)
                                                             TGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTT                                 <  SRR4302541.723161/94‑1 (MQ=60)
                                                             GGGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTT                                 <  SRR4302541.7970029/94‑1 (MQ=60)
                                                              GGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTG                                <  SRR4302541.2637962/94‑1 (MQ=60)
                                                              GGCCCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTG                                <  SRR4302541.715016/94‑1 (MQ=60)
                                                              GGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTG                                <  SRR4302541.1416726/94‑1 (MQ=60)
                                                              GGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTG                                <  SRR4302541.5719695/94‑1 (MQ=60)
                                                                 CCTGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACT                             >  SRR4302541.6437535/1‑94 (MQ=60)
                                                                 CCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACT                             >  SRR4302541.7347667/1‑94 (MQ=60)
                                                                  CTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTT                            <  SRR4302541.5956310/94‑1 (MQ=60)
                                                                   TGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTT                           <  SRR4302541.3297045/94‑1 (MQ=60)
                                                                   TGCAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTT                           <  SRR4302541.3297046/94‑1 (MQ=60)
                                                                   TGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTT                           <  SRR4302541.5135025/94‑1 (MQ=60)
                                                                     CAAATGTATGTGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTA                         <  SRR4302541.4254747/94‑1 (MQ=60)
                                                                     CAAATGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTA                         <  SRR4302541.4254750/94‑1 (MQ=60)
                                                                       AATGTATATGAATGATGGTACAACGGCCATCACTCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAA                       >  SRR4302541.4155694/1‑94 (MQ=60)
                                                                       AATGTATATGAATGATGGTACAACGGCCATCACTCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAA                       >  SRR4302541.4155693/1‑94 (MQ=60)
                                                                       AATGGATATGAATGATGGGTCAAAGGCCAGCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAA                       <  SRR4302541.6835967/94‑1 (MQ=60)
                                                                         TGTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGT                     <  SRR4302541.1489060/94‑1 (MQ=60)
                                                                          GTATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTT                    <  SRR4302541.7902573/94‑1 (MQ=60)
                                                                            ATATGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGA                  <  SRR4302541.5218647/94‑1 (MQ=60)
                                                                            ATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGT                  >  SRR4302541.6567185/1‑94 (MQ=60)
                                                                               TGAATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTA               <  SRR4302541.3373646/94‑1 (MQ=60)
                                                                                GAATGATGGTACAGCGGCCATCACGCCAGACACATAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTAT              <  SRR4302541.6036726/94‑1 (MQ=60)
                                                                                 AATGATGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATA             <  SRR4302541.1191071/94‑1 (MQ=60)
                                                                                 AATGATAGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATA             <  SRR4302541.1191070/94‑1 (MQ=60)
                                                                                  ATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATAT            <  SRR4302541.3487176/94‑1 (MQ=60)
                                                                                      TGGTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCT        <  SRR4302541.7186063/94‑1 (MQ=60)
                                                                                        GTACAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTAC      <  SRR4302541.479337/94‑1 (MQ=60)
                                                                                        GTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTAC      <  SRR4302541.7581830/94‑1 (MQ=60)
                                                                                         TACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTACG     >  SRR4302541.5925133/1‑94 (MQ=60)
                                                                                           CAGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTACGGG   <  SRR4302541.7214801/94‑1 (MQ=60)
                                                                                           CAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTACGGG   <  SRR4302541.6576101/94‑1 (MQ=60)
                                                                                            AGCGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTACGGGG  >  SRR4302541.6756465/1‑94 (MQ=60)
                                                                                             |                                                                                            
GCGGATACTACTCAGATTACAGCGTTTGCTAACCAGGCCTCATCTGATGCTGCTACAAACGTGGCCCTGCAAATGTATATGAATGATGGTACAACGGCCATCACGCCAGACACAGAAACCGGGAACATTTTGTTGCAGGATGGAGATCAGACGTTGACTTTTAAAGTTGATTATATCGCTACGGGG  >  NC_000913/997388‑997573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑