Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGGCGTAGC > NC_000913/1232416‑1232602
|
AGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGGGTAAGGCAGGGT > SRR4302541.1989076/1‑94 (MQ=60)
GCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCC > SRR4302541.581430/1‑94 (MQ=60)
CCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACTAGTGTCAGGACGAGGGTGTAAGGCAGGGTCA > SRR4302541.6314821/1‑94 (MQ=60)
CCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCA > SRR4302541.957128/1‑94 (MQ=60)
CCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCA < SRR4302541.7728791/94‑1 (MQ=60)
CCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCA > SRR4302541.3678720/1‑94 (MQ=60)
CCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCAT < SRR4302541.2027316/94‑1 (MQ=60)
CCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCAT > SRR4302541.1727834/1‑94 (MQ=60)
CCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCAT > SRR4302541.8020712/1‑94 (MQ=60)
CCATTTGCATAAACCATTCGGGTACAGGGGCAAGCGTAAACTCGACGCAGAGAAAGCCGACGAGGGCAAGGACGAGGGGGTAAGGGAGGGCCAT > SRR4302541.6842833/1‑94 (MQ=60)
CATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATC > SRR4302541.772508/1‑94 (MQ=60)
CATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATC < SRR4302541.8068863/94‑1 (MQ=60)
ATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCC < SRR4302541.1887324/94‑1 (MQ=60)
TTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCA > SRR4302541.7458546/1‑94 (MQ=60)
TTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCAC < SRR4302541.6535566/94‑1 (MQ=60)
GCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACAC < SRR4302541.3003170/94‑1 (MQ=60)
CATAAACCATTCGGTTACAGGGTCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACC < SRR4302541.7169004/94‑1 (MQ=60)
CATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCAACACC > SRR4302541.2778784/1‑94 (MQ=60)
ATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCA < SRR4302541.4556347/94‑1 (MQ=60)
ATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCA > SRR4302541.572615/1‑94 (MQ=60)
ATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCA > SRR4302541.7039488/1‑94 (MQ=60)
TAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCAT < SRR4302541.5217032/94‑1 (MQ=60)
AAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATG < SRR4302541.7565362/94‑1 (MQ=60)
AAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATG < SRR4302541.5687920/94‑1 (MQ=60)
ACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCG < SRR4302541.3555565/94‑1 (MQ=60)
ACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCG > SRR4302541.5784974/1‑94 (MQ=60)
CATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGC > SRR4302541.2061398/1‑94 (MQ=60)
CATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGC > SRR4302541.142351/1‑94 (MQ=60)
ATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACTAGTGTCAGGACGAGGGGGTAAGGCAGGGCCATCCACACCATGCagca > SRR4302541.2819000/1‑90 (MQ=60)
ATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCC > SRR4302541.4297885/1‑94 (MQ=60)
TCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCAT < SRR4302541.8726328/94‑1 (MQ=60)
CGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATA < SRR4302541.8253136/94‑1 (MQ=60)
CGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGGGTCAGGACGAGGGTGAAAGGCAGGGTCATCCACACCATGCGGCCATA > SRR4302541.6230718/1‑94 (MQ=60)
GGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAA < SRR4302541.1196670/94‑1 (MQ=60)
TACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAG > SRR4302541.7468388/1‑94 (MQ=60)
ACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGA < SRR4302541.1398215/94‑1 (MQ=60)
CAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAG < SRR4302541.3198499/94‑1 (MQ=60)
AAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAG < SRR4302541.1787111/94‑1 (MQ=60)
AGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGG > SRR4302541.2940549/1‑94 (MQ=60)
AGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGG < SRR4302541.5281487/94‑1 (MQ=60)
AGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGG < SRR4302541.6067086/94‑1 (MQ=60)
ggggagagactaagctgtacgcaggtCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGC < SRR4302541.1645560/68‑1 (MQ=60)
GGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGC < SRR4302541.1554785/94‑1 (MQ=60)
GGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGC > SRR4302541.392842/1‑94 (MQ=60)
GGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGGGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGC > SRR4302541.8206096/1‑94 (MQ=60)
GGGCAAGCGTAAACTCGGCGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCG < SRR4302541.3082335/94‑1 (MQ=60)
GGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCG > SRR4302541.8115780/1‑94 (MQ=60)
GGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCG < SRR4302541.6569077/94‑1 (MQ=60)
GCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAA < SRR4302541.7654899/94‑1 (MQ=60)
CAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAAT > SRR4302541.3869562/1‑94 (MQ=60)
CAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAAT > SRR4302541.6193343/1‑94 (MQ=60)
AAGCGTAACCTCCACGCAAAGCAAGCCGCCGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATC < SRR4302541.3008908/94‑1 (MQ=60)
AAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATC < SRR4302541.7254025/94‑1 (MQ=60)
AAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATC < SRR4302541.3826003/94‑1 (MQ=60)
AAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATC < SRR4302541.3008907/94‑1 (MQ=60)
AAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATC < SRR4302541.5989586/94‑1 (MQ=60)
AAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATC > SRR4302541.1077506/1‑94 (MQ=60)
AAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATC < SRR4302541.5724207/94‑1 (MQ=60)
AAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATC > SRR4302541.8156084/1‑94 (MQ=60)
AAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATA > SRR4302541.1929641/1‑94 (MQ=60)
AGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCA > SRR4302541.8630792/1‑94 (MQ=60)
AGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCA > SRR4302541.4023170/1‑94 (MQ=60)
AGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCCCACCCTGCGGCCATAAGAGAGGCGACTCA > SRR4302541.6737983/1‑94 (MQ=60)
AGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCA < SRR4302541.8214039/94‑1 (MQ=60)
CGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAAT < SRR4302541.5687560/94‑1 (MQ=60)
CGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAAT < SRR4302541.1576139/94‑1 (MQ=60)
TAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGG > SRR4302541.3135225/1‑94 (MQ=60)
TAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGG < SRR4302541.7992261/94‑1 (MQ=60)
AAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGC < SRR4302541.8595582/94‑1 (MQ=60)
AAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGC < SRR4302541.4394774/94‑1 (MQ=60)
AAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGC > SRR4302541.4521209/1‑94 (MQ=60)
AAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGC < SRR4302541.3000512/94‑1 (MQ=60)
AACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCG < SRR4302541.6401292/94‑1 (MQ=60)
CTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCG < SRR4302541.7703414/94‑1 (MQ=60)
TCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGA > SRR4302541.8305893/1‑94 (MQ=60)
GACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGT < SRR4302541.6902423/94‑1 (MQ=60)
GACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGT < SRR4302541.2083434/94‑1 (MQ=60)
GACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGT < SRR4302541.4189993/94‑1 (MQ=60)
GACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGT < SRR4302541.3966146/94‑1 (MQ=60)
GACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGGGTAAGGCAGGGGCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGG > SRR4302541.4713764/1‑94 (MQ=60)
ACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTG > SRR4302541.626220/1‑94 (MQ=60)
ACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTG > SRR4302541.2478464/1‑94 (MQ=60)
ACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTG < SRR4302541.76785/94‑1 (MQ=60)
ACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTG < SRR4302541.6113643/94‑1 (MQ=60)
ACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTG > SRR4302541.5509229/1‑94 (MQ=60)
GCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGGGCA > SRR4302541.4382239/1‑94 (MQ=60)
CAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAG > SRR4302541.2893909/1‑94 (MQ=60)
CAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAG > SRR4302541.3610479/1‑94 (MQ=60)
AGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGA < SRR4302541.213159/94‑1 (MQ=60)
AGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGA < SRR4302541.5847694/94‑1 (MQ=60)
GAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAG < SRR4302541.5696331/94‑1 (MQ=60)
AGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGG > SRR4302541.888562/1‑94 (MQ=60)
AGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGG < SRR4302541.6785949/94‑1 (MQ=60)
GCAAGCCGACGAGGGTCAGGACGGGGGTGTAAGGCAGGGCCATCCCCCCCATGGGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGT < SRR4302541.7165490/94‑1 (MQ=60)
CAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTC > SRR4302541.3761054/1‑94 (MQ=60)
CAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTC > SRR4302541.841453/1‑94 (MQ=60)
AAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCA > SRR4302541.6579273/1‑94 (MQ=60)
AAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCA < SRR4302541.1255818/94‑1 (MQ=60)
AGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAG > SRR4302541.7419531/1‑94 (MQ=60)
CCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCA > SRR4302541.5841/1‑94 (MQ=60)
CGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGCATCAATGGCGCGAGTGCAGAGGTCAGCAG > SRR4302541.5255680/1‑94 (MQ=60)
CGACGAGTGTCAGGACGAGGGGGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGGGAATCAATGGCGCGAGGGCAGAGGGCAGCAG > SRR4302541.3026685/1‑94 (MQ=60)
CGACGAGTGTCAGGACGAGGGGGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAG > SRR4302541.16064/1‑94 (MQ=60)
GACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGG > SRR4302541.5093680/1‑94 (MQ=60)
GACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGG > SRR4302541.7840762/1‑94 (MQ=60)
GACGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGG > SRR4302541.7840761/1‑94 (MQ=60)
GACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGG > SRR4302541.600866/1‑94 (MQ=60)
CGAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAA > SRR4302541.165494/1‑94 (MQ=60)
GAGTGTCAGGACGAGGGTGTAAGGCAGGGTCGTCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAAC > SRR4302541.100928/1‑94 (MQ=60)
GAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAAC > SRR4302541.5143475/1‑94 (MQ=60)
GAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAAC > SRR4302541.7718739/1‑94 (MQ=60)
GAGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAAC < SRR4302541.6201134/94‑1 (MQ=60)
GAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAAC < SRR4302541.888109/94‑1 (MQ=60)
GAGTGTCAGGAAGAGGGAGAAAGGCAGGGCCATCAACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAAC < SRR4302541.888110/94‑1 (MQ=60)
AGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACA > SRR4302541.3616248/1‑94 (MQ=60)
AGTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACA > SRR4302541.1064412/1‑94 (MQ=60)
GTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAG > SRR4302541.2523194/1‑94 (MQ=60)
GTGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAG < SRR4302541.4723844/94‑1 (MQ=60)
TGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGG < SRR4302541.6240752/94‑1 (MQ=60)
TGTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGG > SRR4302541.5019024/1‑94 (MQ=60)
GTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCTAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGA < SRR4302541.4325452/94‑1 (MQ=60)
GTCAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGA < SRR4302541.760381/94‑1 (MQ=60)
CAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAAC < SRR4302541.1194946/94‑1 (MQ=60)
CAGGACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAAC < SRR4302541.4213624/94‑1 (MQ=60)
GACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCA < SRR4302541.5760677/94‑1 (MQ=60)
GACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCA > SRR4302541.3140870/1‑94 (MQ=60)
GACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCA > SRR4302541.7307526/1‑94 (MQ=60)
GACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCA < SRR4302541.6433796/94‑1 (MQ=60)
ACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAG > SRR4302541.5609453/1‑94 (MQ=60)
ACGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAG < SRR4302541.8388379/94‑1 (MQ=60)
ACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAG < SRR4302541.2882505/94‑1 (MQ=60)
CGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGACCGCAGC > SRR4302541.2509630/1‑94 (MQ=60)
CGAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGC < SRR4302541.4503429/94‑1 (MQ=60)
GAGGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCC > SRR4302541.3461789/1‑94 (MQ=60)
GGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTG > SRR4302541.3508834/1‑94 (MQ=60)
GGGTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTG < SRR4302541.5257353/94‑1 (MQ=60)
GTGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGAC < SRR4302541.7242699/94‑1 (MQ=60)
TGTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACC > SRR4302541.2902611/1‑94 (MQ=60)
GGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACC < SRR4302541.7074442/94‑1 (MQ=60)
GTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCG > SRR4302541.6440379/1‑94 (MQ=60)
GTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCG < SRR4302541.7144329/94‑1 (MQ=60)
GTAAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCG > SRR4302541.2832826/1‑94 (MQ=60)
TAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGT > SRR4302541.2740660/1‑94 (MQ=60)
AAGTCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTT < SRR4302541.6853161/94‑1 (MQ=60)
AAGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGCCCGTT > SRR4302541.7613217/1‑94 (MQ=60)
AGGCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTC > SRR4302541.4278574/1‑94 (MQ=60)
GGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCG < SRR4302541.1866637/94‑1 (MQ=60)
GGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCG < SRR4302541.1957197/94‑1 (MQ=60)
GGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCG < SRR4302541.6114000/94‑1 (MQ=60)
GGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCG > SRR4302541.7816153/1‑94 (MQ=60)
GGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCG < SRR4302541.8222645/94‑1 (MQ=60)
GGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCATGCACGTTCG > SRR4302541.7816152/1‑94 (MQ=60)
GCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGG < SRR4302541.6701235/94‑1 (MQ=60)
GCAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGG < SRR4302541.2421082/94‑1 (MQ=60)
GCAGGGGCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGG < SRR4302541.8652327/94‑1 (MQ=60)
GCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGG < SRR4302541.8652326/94‑1 (MQ=60)
CAGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGGC > SRR4302541.8079290/1‑94 (MQ=60)
CAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGGC > SRR4302541.2948482/1‑94 (MQ=60)
AGGGTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGGCG > SRR4302541.8288369/1‑94 (MQ=60)
AGGGCCAACCACACCATGCCGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGGCG < SRR4302541.6766855/94‑1 (MQ=60)
GGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGGCGT > SRR4302541.8783620/1‑94 (MQ=60)
GTCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGGCGTAG < SRR4302541.6774936/94‑1 (MQ=60)
GCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGGCGTAG < SRR4302541.1593780/94‑1 (MQ=60)
TCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGGCGTAGC > SRR4302541.8546446/1‑94 (MQ=60)
TCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGGCGTAGC < SRR4302541.806064/94‑1 (MQ=60)
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AGCCCATTTGCATAAACCATTCGGTTACAGGGGCAAGCGTAAACTCGACGCAGAGCAAGCCGACGAGTGTCAGGACGAGGGTGTAAGGCAGGGCCATCCACACCATGCGGCCATAAGAGAGGCGAATCAATGGCGCGAGTGCAGAGGTCAGCAGGAACAGGAACGCAGCCTGACCGTTCGGCGTAGC > NC_000913/1232416‑1232602
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
