Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAA > NC_000913/1238404‑1238587
|
CAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGT > SRR4302541.5744219/1‑94 (MQ=60)
CAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGC < SRR4302541.6716186/94‑1 (MQ=60)
AGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTT > SRR4302541.8327951/1‑94 (MQ=60)
AGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCT > SRR4302541.4609609/1‑94 (MQ=60)
CAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTC > SRR4302541.2661102/1‑94 (MQ=60)
AACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCC < SRR4302541.8722264/94‑1 (MQ=60)
AACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCC < SRR4302541.8681556/94‑1 (MQ=60)
GGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCC > SRR4302541.967988/1‑94 (MQ=60)
GCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCC < SRR4302541.5330229/94‑1 (MQ=60)
GCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCC < SRR4302541.2112943/94‑1 (MQ=60)
CAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGTGATGAATCGGTTGGGTTTCCAGCCCG < SRR4302541.4897712/94‑1 (MQ=60)
AGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGA > SRR4302541.2845075/1‑94 (MQ=60)
AGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGA > SRR4302541.6337423/1‑94 (MQ=60)
GCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGAT < SRR4302541.8711315/94‑1 (MQ=60)
CTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATC < SRR4302541.8026566/94‑1 (MQ=60)
CTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATC < SRR4302541.8160803/94‑1 (MQ=60)
CTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATC < SRR4302541.4942714/94‑1 (MQ=60)
CTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATC < SRR4302541.3009669/94‑1 (MQ=60)
TCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCG < SRR4302541.7429085/94‑1 (MQ=60)
AAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCG > SRR4302541.3140292/1‑94 (MQ=60)
AAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGT > SRR4302541.3405790/1‑94 (MQ=60)
AAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGT > SRR4302541.6934784/1‑94 (MQ=60)
AAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGT > SRR4302541.5710846/1‑94 (MQ=60)
GCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGC > SRR4302541.1717123/1‑94 (MQ=60)
CACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCT > SRR4302541.7706634/1‑94 (MQ=60)
ACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTT > SRR4302541.2760877/1‑94 (MQ=60)
ACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTT > SRR4302541.1749866/1‑94 (MQ=60)
ACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTT < SRR4302541.4317070/94‑1 (MQ=60)
ACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTT < SRR4302541.8181301/94‑1 (MQ=60)
ACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGCGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTT < SRR4302541.3508746/94‑1 (MQ=60)
CTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTA < SRR4302541.6412693/94‑1 (MQ=60)
CTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTA > SRR4302541.916578/1‑94 (MQ=60)
GCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACC > SRR4302541.4345231/1‑94 (MQ=60)
CAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCG > SRR4302541.8828753/1‑94 (MQ=60)
AAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGATTCCAGCCCGATAGCGTGCTTTCCGT > SRR4302541.1927656/1‑94 (MQ=60)
AAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTC < SRR4302541.5494283/94‑1 (MQ=60)
AATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCT < SRR4302541.2137271/94‑1 (MQ=60)
ATGCGGCGCTAAAAACACCGTTGGATATTTAGCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTG < SRR4302541.7226864/94‑1 (MQ=60)
ATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTG < SRR4302541.2087089/94‑1 (MQ=60)
ATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTG < SRR4302541.6110234/94‑1 (MQ=60)
ATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTG < SRR4302541.7226865/94‑1 (MQ=60)
CGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCA < SRR4302541.5916121/94‑1 (MQ=60)
CGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGGTTCCAGCCCGATCGGGTGCTTACCGTCTGGCA > SRR4302541.6155730/1‑94 (MQ=60)
CGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGC < SRR4302541.162628/94‑1 (MQ=60)
GCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAG < SRR4302541.1399897/94‑1 (MQ=60)
GCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAG < SRR4302541.8274321/94‑1 (MQ=60)
CTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGT > SRR4302541.3491413/1‑94 (MQ=60)
CTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGT > SRR4302541.153382/1‑94 (MQ=60)
TAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTT < SRR4302541.4939912/94‑1 (MQ=60)
TAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTT > SRR4302541.917208/1‑94 (MQ=60)
AAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGC < SRR4302541.570714/94‑1 (MQ=60)
AAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGAG > SRR4302541.7481086/1‑94 (MQ=60)
AAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGGTGCG > SRR4302541.2719814/1‑94 (MQ=60)
AAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCG > SRR4302541.7445447/1‑94 (MQ=60)
GCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGG > SRR4302541.8163417/1‑94 (MQ=60)
CACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGC < SRR4302541.6365023/94‑1 (MQ=60)
ACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCA > SRR4302541.7113825/1‑94 (MQ=60)
ACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCA > SRR4302541.7027365/1‑94 (MQ=60)
CCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAA > SRR4302541.3783144/1‑94 (MQ=60)
CCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAA > SRR4302541.6599119/1‑94 (MQ=60)
CGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAAT < SRR4302541.8109101/94‑1 (MQ=60)
CGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAAT < SRR4302541.4440434/94‑1 (MQ=60)
GTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATG < SRR4302541.2037339/94‑1 (MQ=60)
GTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATG > SRR4302541.8671267/1‑94 (MQ=60)
GTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTACAGCCCGATCGGGGGATTACCGTCTGGCAGCAGGTGCGGGGAATG > SRR4302541.8671268/1‑94 (MQ=60)
GTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATAGGTTGGGTTTCCAGCCCGATGGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATG > SRR4302541.1064275/1‑94 (MQ=60)
TTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGG < SRR4302541.5154974/94‑1 (MQ=60)
TTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGG > SRR4302541.5658099/1‑94 (MQ=60)
TTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGG > SRR4302541.379048/1‑94 (MQ=60)
TTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGG < SRR4302541.6894929/94‑1 (MQ=60)
TTGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGC < SRR4302541.7609959/94‑1 (MQ=60)
GATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGA > SRR4302541.1002055/1‑94 (MQ=60)
GATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGA > SRR4302541.8632192/1‑94 (MQ=60)
GATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGA > SRR4302541.5738557/1‑94 (MQ=60)
GATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGA < SRR4302541.652440/94‑1 (MQ=60)
TATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAAT < SRR4302541.1905551/94‑1 (MQ=60)
ATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATG < SRR4302541.5189602/94‑1 (MQ=60)
ATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATG < SRR4302541.8416063/94‑1 (MQ=60)
ATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGGTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATG > SRR4302541.5575401/1‑94 (MQ=60)
ATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCGCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATG > SRR4302541.4149590/1‑94 (MQ=60)
ATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATG < SRR4302541.3426023/94‑1 (MQ=60)
ATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATG > SRR4302541.8519764/1‑94 (MQ=60)
ATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATG < SRR4302541.4960708/94‑1 (MQ=60)
TTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGT < SRR4302541.1265169/94‑1 (MQ=60)
TTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGT < SRR4302541.1265168/94‑1 (MQ=60)
TTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTT > SRR4302541.1122841/1‑94 (MQ=60)
TTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTT > SRR4302541.8598442/1‑94 (MQ=60)
TTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTT < SRR4302541.1201123/94‑1 (MQ=60)
TTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTT < SRR4302541.4266356/94‑1 (MQ=60)
TATCTTAAAGTGAACAGTGGGATGAATCGGTTGTGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTG < SRR4302541.8562792/94‑1 (MQ=60)
TATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTG < SRR4302541.522750/94‑1 (MQ=60)
TATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTG < SRR4302541.3546793/94‑1 (MQ=60)
ATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGG < SRR4302541.200849/94‑1 (MQ=60)
TCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGC < SRR4302541.6664552/94‑1 (MQ=60)
TCTTAAAGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGC > SRR4302541.4557605/1‑94 (MQ=60)
CTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCG > SRR4302541.3665630/1‑94 (MQ=60)
AAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAA > SRR4302541.7318223/1‑94 (MQ=60)
AAGTGAACGGTGGGATGATTCGGTTGAGTATCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCGGTTGCGGGCGATGGCGAATGTTGGCGAAAT < SRR4302541.7930597/94‑1 (MQ=60)
AGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATG < SRR4302541.1490763/94‑1 (MQ=60)
AGTGAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATG > SRR4302541.491948/1‑94 (MQ=60)
AGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATG > SRR4302541.1944622/1‑94 (MQ=60)
GAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACC < SRR4302541.5622020/94‑1 (MQ=60)
GAACAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACC < SRR4302541.7843754/94‑1 (MQ=60)
AACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCC > SRR4302541.4229864/1‑94 (MQ=60)
CAGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTG < SRR4302541.8116326/94‑1 (MQ=60)
CAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTG > SRR4302541.7467359/1‑94 (MQ=60)
AGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTTCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGA < SRR4302541.7482169/94‑1 (MQ=60)
AGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGA > SRR4302541.4298662/1‑94 (MQ=60)
AGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGA < SRR4302541.2292473/94‑1 (MQ=60)
AGTGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGA > SRR4302541.4298661/1‑94 (MQ=60)
TGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATT > SRR4302541.6876385/1‑94 (MQ=60)
TGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATG < SRR4302541.3260627/94‑1 (MQ=60)
TGGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATG > SRR4302541.2368267/1‑94 (MQ=60)
TGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATG > SRR4302541.3737477/1‑94 (MQ=60)
TGGGACGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATG > SRR4302541.6876386/1‑94 (MQ=60)
GGGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGT < SRR4302541.6445862/94‑1 (MQ=60)
GGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGT > SRR4302541.3371055/1‑94 (MQ=60)
GGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGT < SRR4302541.5126196/94‑1 (MQ=60)
GGATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTC > SRR4302541.8530191/1‑94 (MQ=60)
GATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCG < SRR4302541.773955/94‑1 (MQ=60)
GATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCG < SRR4302541.1469637/94‑1 (MQ=60)
GATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCG > SRR4302541.8389626/1‑94 (MQ=60)
ATGAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGC > SRR4302541.749033/1‑94 (MQ=60)
ATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGC > SRR4302541.8039451/1‑94 (MQ=60)
GAATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCAT < SRR4302541.3909502/94‑1 (MQ=60)
AATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATT > SRR4302541.5279442/1‑94 (MQ=60)
AATCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGCCGAAATGACCCTGATGTCGCATT > SRR4302541.5033340/1‑94 (MQ=60)
AATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATT < SRR4302541.22068/94‑1 (MQ=60)
AATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATT > SRR4302541.7879591/1‑94 (MQ=60)
ATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTT < SRR4302541.3855946/94‑1 (MQ=60)
TCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTT < SRR4302541.6070225/94‑1 (MQ=60)
TCGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTT < SRR4302541.3128651/94‑1 (MQ=60)
CGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTG < SRR4302541.276967/94‑1 (MQ=60)
CGGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTG > SRR4302541.7681320/1‑94 (MQ=60)
GGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGCATGTTGGCGAAATGACCCTGATGTCGCATTTTGC > SRR4302541.3554409/1‑94 (MQ=60)
GGTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGC > SRR4302541.1713985/1‑94 (MQ=60)
GTTGGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGTCGAGATGACCCTGATGTCGCATTTTtct > SRR4302541.1948848/1‑91 (MQ=60)
TGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGA < SRR4302541.3829315/94‑1 (MQ=60)
GGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAA < SRR4302541.3995179/94‑1 (MQ=60)
GGGTTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAA > SRR4302541.5141230/1‑94 (MQ=60)
GGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAA < SRR4302541.6002766/94‑1 (MQ=60)
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CAGCAACTGGCAGCTCAAAGCACTGCAAAATGCGCGGCTAAAAGCACCGTTGGATATTTATCTTAAAGTGAACAGTGGGATGAATCGGTTGGGCTTCCAGCCCGATCGCGTGCTTACCGTCTGGCAGCAGTTGCGGGCAATGGCGAATGTTGGCGAAATGACCCTGATGTCGCATTTTGCCGAA > NC_000913/1238404‑1238587
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
