Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
847,139 |
G→T |
A30E (GCG→GAG) |
glnH ← |
periplasmic glutamine‑binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 847,139 | 0 | G | T | 100.0%
| 810.9
/ NA
| 207 | A30E (GCG→GAG) | glnH | periplasmic glutamine‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (110/97); total (110/97) |
Only 100 of 212 total aligned reads displayed.
TCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATA > NC_000913/847049‑847228
|
aGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAAc > 1:3438202/1‑93 (MQ=255)
aGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAAc < 2:3826366/93‑1 (MQ=255)
gCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACt < 1:2076412/93‑1 (MQ=255)
gCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACt > 2:4063066/1‑93 (MQ=255)
gATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTaa < 1:5680821/93‑1 (MQ=255)
gATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTaa < 2:4297615/93‑1 (MQ=255)
aTGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAt < 2:5328014/93‑1 (MQ=255)
aTGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAt < 1:3101673/93‑1 (MQ=255)
tGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAtt < 2:1375121/93‑1 (MQ=255)
tGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAtt > 2:2580321/1‑93 (MQ=255)
ggCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAttt < 1:1145482/93‑1 (MQ=255)
gCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAtttt < 2:3948068/93‑1 (MQ=255)
gCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAttttttt > 1:1841050/1‑92 (MQ=255)
gCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTa < 2:322291/93‑1 (MQ=255)
ccACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATc > 2:5349928/1‑93 (MQ=255)
ccACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAAGCGGTATCCGTCTCCACAACTAATTTTTTATc > 1:2592244/1‑93 (MQ=255)
cacaGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATcc < 1:580506/93‑1 (MQ=255)
cacaGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATcc < 2:2462208/93‑1 (MQ=255)
acaGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCcg > 1:4980302/1‑93 (MQ=255)
caGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCcgc < 2:3236613/93‑1 (MQ=255)
aGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCcgcg > 1:4769433/1‑93 (MQ=255)
gATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCgg > 1:3889947/1‑93 (MQ=255)
gATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCgg > 1:1661304/1‑93 (MQ=255)
tCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCa > 2:300757/1‑93 (MQ=255)
cAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCAt > 1:3172494/1‑93 (MQ=255)
cAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCAt < 1:1386712/93‑1 (MQ=255)
aaCGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATg < 2:5781748/93‑1 (MQ=255)
cGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATgag < 1:2132713/93‑1 (MQ=255)
cAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGACGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGagaag > 2:4173026/1‑93 (MQ=255)
cAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGagaag < 2:4793801/93‑1 (MQ=255)
cAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGagaag < 2:2837572/93‑1 (MQ=255)
cAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGagaag < 1:6146318/93‑1 (MQ=255)
cAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGCATCCGTCTCGACAACTAATTTTTTATCCGCGGGATGagaag > 1:6006409/1‑93 (MQ=255)
gCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAAc > 1:4535035/1‑93 (MQ=255)
cccACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAAcc > 2:5729410/1‑93 (MQ=255)
ccACATATTTATCGCCCTGTTTAAATTCATACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCg < 1:6354367/93‑1 (MQ=255)
ccACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCg > 1:4452791/1‑93 (MQ=255)
ccACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCg > 1:1887654/1‑93 (MQ=255)
cacaTATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGc > 1:2275116/1‑93 (MQ=255)
atatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaa > 1:3814720/1‑93 (MQ=255)
atatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaa > 1:2797568/1‑93 (MQ=255)
tatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaaa > 2:3633658/1‑93 (MQ=255)
tatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaaa > 2:3596878/1‑93 (MQ=255)
tatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaaa < 2:696817/93‑1 (MQ=255)
tatTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCaaaa < 1:3706576/93‑1 (MQ=255)
tttATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGc < 2:290487/93‑1 (MQ=255)
ttATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGcc > 2:4415925/1‑93 (MQ=255)
ttATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGcc < 1:5384129/93‑1 (MQ=255)
ttATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGcc < 2:4328110/93‑1 (MQ=255)
tATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCa < 2:140719/93‑1 (MQ=255)
aTCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAg < 2:6062918/93‑1 (MQ=255)
aTCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAAAAACAACAAAAACCAg > 1:4595516/1‑93 (MQ=255)
tCGCCTTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAgg < 1:1510750/93‑1 (MQ=255)
tCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAgg < 2:3736021/93‑1 (MQ=255)
cGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAggg < 1:1466085/93‑1 (MQ=255)
gCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGt < 2:6356418/93‑1 (MQ=255)
cTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAg > 2:2103360/1‑93 (MQ=255)
cTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGACTGAGAAGAAACCGCACAAGCCAGGGTCAg > 1:5485862/1‑93 (MQ=255)
tttAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGc < 1:3338586/93‑1 (MQ=255)
aaaTTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGc > 1:4104982/1‑93 (MQ=255)
aTTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCa < 2:4486170/93‑1 (MQ=255)
aTTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCa < 2:5627281/93‑1 (MQ=255)
ttCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAg < 2:1916525/93‑1 (MQ=255)
tCAAACGGAACGAAGGCGGTAGCCGTCCCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGt < 1:3763712/93‑1 (MQ=255)
cAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTg > 2:4917573/1‑93 (MQ=255)
cAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTg < 1:4010543/93‑1 (MQ=255)
aaaCGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGa > 2:4515830/1‑93 (MQ=255)
aCGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGaaa > 1:6061704/1‑93 (MQ=255)
aCGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGaaa > 1:6429217/1‑93 (MQ=255)
aCGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGaaa < 2:5508904/93‑1 (MQ=255)
cGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAAc < 1:4216790/93‑1 (MQ=255)
cGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAAc < 2:3541171/93‑1 (MQ=255)
ggAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACt < 2:1935961/93‑1 (MQ=255)
ggAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACt < 2:805592/93‑1 (MQ=255)
gAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACtt > 1:3282913/1‑93 (MQ=255)
gAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACtt > 2:1885117/1‑93 (MQ=255)
aaCGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACttt < 2:3364429/93‑1 (MQ=255)
aaCGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACttt < 2:2206658/93‑1 (MQ=255)
aaCGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACttt < 1:4897333/93‑1 (MQ=255)
aCGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACtttt > 1:2751180/1‑93 (MQ=255)
gAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTaa > 2:5488272/1‑93 (MQ=255)
aaGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAAt > 2:616128/1‑93 (MQ=255)
aaGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAAt < 1:1241289/93‑1 (MQ=255)
aaGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAAt > 1:3594331/1‑93 (MQ=255)
aGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATa > 2:242280/1‑93 (MQ=255)
ggCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATAc > 1:4336476/1‑93 (MQ=255)
ggTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGa > 1:232507/1‑93 (MQ=255)
gTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGAc > 2:2547438/1‑93 (MQ=255)
gTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGAc > 1:2670066/1‑93 (MQ=255)
tCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTc > 1:56189/1‑93 (MQ=255)
tCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTc > 1:325111/1‑93 (MQ=255)
tCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTc > 1:2481031/1‑93 (MQ=255)
ccGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCa < 1:1965148/93‑1 (MQ=255)
ccGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCa < 2:18089/93‑1 (MQ=255)
ccGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCa < 2:1090200/93‑1 (MQ=255)
cGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCAt < 2:857647/93‑1 (MQ=255)
gTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATa > 1:3027956/1‑93 (MQ=255)
gTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATa < 1:4749693/93‑1 (MQ=255)
gTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATa < 2:46884/93‑1 (MQ=255)
gTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATa < 2:4446694/93‑1 (MQ=255)
|
TCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATA > NC_000913/847049‑847228
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCAT > NC_000913/847046‑847232
|
AGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCT < SRR4302534.5444041/94‑1 (MQ=60)
AGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCT < SRR4302534.4974162/94‑1 (MQ=60)
GCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTC < SRR4302534.5993960/94‑1 (MQ=60)
GCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTC < SRR4302534.4038427/94‑1 (MQ=60)
GCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTC < SRR4302534.4384609/94‑1 (MQ=60)
CTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCG > SRR4302534.2527111/1‑94 (MQ=60)
CTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCG < SRR4302534.3985580/94‑1 (MQ=60)
TAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAAC > SRR4302534.3530603/1‑94 (MQ=60)
GCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTA < SRR4302534.2130776/94‑1 (MQ=60)
CGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAA > SRR4302534.3285832/1‑94 (MQ=60)
GATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAT < SRR4302534.5834644/94‑1 (MQ=60)
GATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAAT > SRR4302534.2055143/1‑94 (MQ=60)
ATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATT > SRR4302534.1495980/1‑94 (MQ=60)
ATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATT < SRR4302534.3183254/94‑1 (MQ=60)
ATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATT < SRR4302534.2283394/94‑1 (MQ=60)
TGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTT > SRR4302534.4271299/1‑94 (MQ=60)
GGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTT < SRR4302534.1175487/94‑1 (MQ=60)
AGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTT > SRR4302534.1888902/1‑94 (MQ=60)
CCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATC > SRR4302534.4874735/1‑94 (MQ=60)
CCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAAGCGGTATCCGTCTCCACAACTAATTTTTTATC > SRR4302534.2660860/1‑94 (MQ=60)
CCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCC < SRR4302534.652618/94‑1 (MQ=60)
CCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCC > SRR4302534.4380116/1‑94 (MQ=60)
CACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCG < SRR4302534.594725/94‑1 (MQ=60)
CACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCG > SRR4302534.5115098/1‑94 (MQ=60)
CAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCG > SRR4302534.4898924/1‑94 (MQ=60)
AGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGG > SRR4302534.3994371/1‑94 (MQ=60)
AGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGG > SRR4302534.1704575/1‑94 (MQ=60)
GATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGC > SRR4302534.3587396/1‑94 (MQ=60)
GATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGC < SRR4302534.1586704/94‑1 (MQ=60)
TCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCAT > SRR4302534.3256219/1‑94 (MQ=60)
CAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATG < SRR4302534.5839304/94‑1 (MQ=60)
CAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATG < SRR4302534.1423206/94‑1 (MQ=60)
ACTTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGAATCCGTCTCGACAACTAATTTTATATCCGCGGCATGAG > SRR4302534.1899543/1‑94 (MQ=60)
ACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAG < SRR4302534.4569671/94‑1 (MQ=60)
CGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGA < SRR4302534.3567481/94‑1 (MQ=60)
CGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGA < SRR4302534.2188901/94‑1 (MQ=60)
CGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGA > SRR4302534.1520315/1‑94 (MQ=60)
TCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGCATCCGTCTCGACAACTAATTTTTTATCCGCGGGATGAGAAG > SRR4302534.6169593/1‑94 (MQ=60)
CAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGA < SRR4302534.6313465/94‑1 (MQ=60)
CAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGA > SRR4302534.57755/1‑94 (MQ=60)
AAAGCCCACATATTTATCGCCTTGTTTAAATTCAAACGGAGCGAAGCCGGTATCCGTCTCGACAACTACTTTTTTAGCCGCGGCATGAGAAGAA < SRR4302534.4121367/94‑1 (MQ=60)
AAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAA > SRR4302534.3339803/1‑94 (MQ=60)
AAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAA > SRR4302534.5698967/1‑94 (MQ=60)
AAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAA < SRR4302534.2674406/94‑1 (MQ=60)
AAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAA < SRR4302534.4494008/94‑1 (MQ=60)
AAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAA > SRR4302534.555206/1‑94 (MQ=60)
AGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAAC > SRR4302534.4657933/1‑94 (MQ=60)
CCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCG > SRR4302534.1385766/1‑94 (MQ=60)
CCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCG > SRR4302534.1988649/1‑94 (MQ=60)
CCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCG > SRR4302534.1936873/1‑94 (MQ=60)
CCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCG > SRR4302534.4573149/1‑94 (MQ=60)
CCACATATTTATCGCCCTGTTTAAATTCATACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGC < SRR4302534.6525982/94‑1 (MQ=60)
CCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGC > SRR4302534.4605986/1‑94 (MQ=60)
CCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGC > SRR4302534.2335474/1‑94 (MQ=60)
CCACATATTTATCGCCATGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGC < SRR4302534.3696119/94‑1 (MQ=60)
CATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAA > SRR4302534.2871145/1‑94 (MQ=60)
CATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAA > SRR4302534.2143404/1‑94 (MQ=60)
CATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAA > SRR4302534.3917179/1‑94 (MQ=60)
TATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAG < SRR4302534.3806224/94‑1 (MQ=60)
GTTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGC > SRR4302534.3807548/1‑94 (MQ=60)
TTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCA < SRR4302534.5529156/94‑1 (MQ=60)
TATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAG > SRR4302534.6213196/1‑94 (MQ=60)
TATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAG < SRR4302534.285765/94‑1 (MQ=60)
TATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAAAAACAACAAAAACCAG > SRR4302534.4720236/1‑94 (MQ=60)
ATCGCTCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTACCCGCGGCATGAGAAGAATCCGCAAAAGCCAGG < SRR4302534.4220007/94‑1 (MQ=60)
TCGCCTTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGG < SRR4302534.1550470/94‑1 (MQ=60)
CGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGT < SRR4302534.1504646/94‑1 (MQ=60)
CCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCA < SRR4302534.2600514/94‑1 (MQ=60)
CCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAG > SRR4302534.3173311/1‑94 (MQ=60)
CCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGACTGAGAAGAAACCGCACAAGCCAGGGTCAG > SRR4302534.5633817/1‑94 (MQ=60)
CTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGT > SRR4302534.2089336/1‑94 (MQ=60)
TGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTG < SRR4302534.1207906/94‑1 (MQ=60)
TGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTG < SRR4302534.2353816/94‑1 (MQ=60)
GTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGC > SRR4302534.5140452/1‑94 (MQ=60)
TTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCA < SRR4302534.3427906/94‑1 (MQ=60)
TTTAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCA < SRR4302534.4880937/94‑1 (MQ=60)
TAAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGC > SRR4302534.4215379/1‑94 (MQ=60)
AAATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCC < SRR4302534.2818274/94‑1 (MQ=60)
AATTCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCA > SRR4302534.5547719/1‑94 (MQ=60)
TCAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTG < SRR4302534.4714900/94‑1 (MQ=60)
TCAAACGGAACGAAGGCGGTAGCCGTCCCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTG < SRR4302534.3864753/94‑1 (MQ=60)
CAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGA < SRR4302534.4117940/94‑1 (MQ=60)
CAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGA > SRR4302534.1779543/1‑94 (MQ=60)
CAAACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGA > SRR4302534.4976062/1‑94 (MQ=60)
AACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAA > SRR4302534.6226530/1‑94 (MQ=60)
AACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAA > SRR4302534.6602569/1‑94 (MQ=60)
AACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAA > SRR4302534.3224893/1‑94 (MQ=60)
AACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAA < SRR4302534.4037549/94‑1 (MQ=60)
ACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAAC < SRR4302534.5065292/94‑1 (MQ=60)
ACGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAAC < SRR4302534.3040485/94‑1 (MQ=60)
CGGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACT < SRR4302534.4330510/94‑1 (MQ=60)
GGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTT > SRR4302534.3370416/1‑94 (MQ=60)
GGAACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTT < SRR4302534.3426798/94‑1 (MQ=60)
AACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTT > SRR4302534.2823653/1‑94 (MQ=60)
AACGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTT < SRR4302534.5030107/94‑1 (MQ=60)
CGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAA > SRR4302534.6544981/1‑94 (MQ=60)
CGAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAA > SRR4302534.3474408/1‑94 (MQ=60)
GAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAAT > SRR4302534.3870019/1‑94 (MQ=60)
GAAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAAT > SRR4302534.3691002/1‑94 (MQ=60)
AAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATA < SRR4302534.1274000/94‑1 (MQ=60)
AAGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATA > SRR4302534.3947529/1‑94 (MQ=60)
AGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATAC > SRR4302534.4453694/1‑94 (MQ=60)
AGGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATAC > SRR4302534.2842517/1‑94 (MQ=60)
GGCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACA < SRR4302534.758271/94‑1 (MQ=60)
GCGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAG > SRR4302534.6333342/1‑94 (MQ=60)
CGGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGA > SRR4302534.238592/1‑94 (MQ=60)
GGTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGAC > SRR4302534.2740637/1‑94 (MQ=60)
GTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACT > SRR4302534.6008615/1‑94 (MQ=60)
GTATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACT > SRR4302534.621254/1‑94 (MQ=60)
ATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTC > SRR4302534.333461/1‑94 (MQ=60)
ATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTC > SRR4302534.57707/1‑94 (MQ=60)
ATCCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTC > SRR4302534.2546929/1‑94 (MQ=60)
CCGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCAT < SRR4302534.2016595/94‑1 (MQ=60)
CGTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATA > SRR4302534.3107334/1‑94 (MQ=60)
GTCTCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAG < SRR4302534.4878621/94‑1 (MQ=60)
TCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCAT > SRR4302534.4352395/1‑94 (MQ=60)
|
AGCTCTTTAGCGATGGCAGCCCACAGATCAACGTCAAAGCCCACATATTTATCGCCCTGTTTAAATTCAAACGGAACGAAGGCGGTATCCGTCGCGACAACTAATTTTTTATCCGCGGCATGAGAAGAAACCGCAAAAGCCAGGGTCAGTGCAGCCAGTGAAACTTTTAATACAGACTTCATAGCAT > NC_000913/847046‑847232
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
