Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
962,413 |
A→G |
N399S (AAC→AGC) |
rpsA → |
30S ribosomal subunit protein S1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 962,413 | 0 | A | G | 100.0%
| 759.4
/ NA
| 220 | N399S (AAC→AGC) | rpsA | 30S ribosomal subunit protein S1 |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (87/133); total (87/133) |
Only 100 of 241 total aligned reads displayed.
GTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTA > NC_000913/962323‑962502
|
gTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCg > 2:2540418/1‑93 (MQ=255)
tAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGt < 2:4406206/93‑1 (MQ=255)
aaaaTCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTCACATCTCCTGGAGCGtt > 2:409506/1‑93 (MQ=255)
aaaaTCAAGCCGATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGtt < 1:5826699/93‑1 (MQ=255)
aaaTCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTg > 1:1945348/1‑93 (MQ=255)
agcAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCa < 1:467418/91‑1 (MQ=255)
tCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAg > 2:2207263/1‑93 (MQ=255)
tCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAg < 2:4019460/93‑1 (MQ=255)
aGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCg > 1:110173/1‑93 (MQ=255)
aGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCg > 1:2074355/1‑93 (MQ=255)
tATCACTGACTTCGGTATCTTCATCGGCTTGGTCGGCGGCATCGACGGCCTGGCTCTCCTTTCTGGCTTGTCCTGGATCGATGCTGGAgaagc > 2:3455709/1‑92 (MQ=255)
tATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCgaaga < 2:197181/93‑1 (MQ=255)
tATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTAGAGCGTTGCAGGCgaaga < 2:4003460/93‑1 (MQ=255)
aTCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTTGTTCACCTGTCTGACATTTCCTGGAGCGGTGCAGGCgaagaa > 2:3836983/1‑93 (MQ=255)
cACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATGTCCTGGAGCGTTGCAGGCGAAGAAGc > 2:906481/1‑93 (MQ=255)
cACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGaagaagg > 2:493880/1‑92 (MQ=255)
cACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGGAGGAGc > 1:6077619/1‑93 (MQ=255)
aCTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCa < 2:5290845/93‑1 (MQ=255)
aCTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCa < 1:1136971/93‑1 (MQ=255)
tGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGt < 1:2998389/93‑1 (MQ=255)
tGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGt > 1:3847666/1‑93 (MQ=255)
gACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGtt > 1:3124019/1‑93 (MQ=255)
gACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGtt < 1:5608056/93‑1 (MQ=255)
gACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGtt < 2:2358592/93‑1 (MQ=255)
cTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTTGAGCGTTGCAGGCGGAGAAGCAGTTCg > 2:1670788/1‑93 (MQ=255)
cTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCg > 1:1323505/1‑93 (MQ=255)
cTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCg > 1:5914185/1‑93 (MQ=255)
ttCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGt > 2:4177333/1‑93 (MQ=255)
ttCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGt > 1:3825104/1‑93 (MQ=255)
tCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTg < 2:5917279/93‑1 (MQ=255)
ggTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGaa > 1:1753324/1‑93 (MQ=255)
ggTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGaa > 1:4344647/1‑93 (MQ=255)
gTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAAt > 1:6447891/1‑93 (MQ=255)
gTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAAt > 2:1556859/1‑93 (MQ=255)
tCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACa < 2:1527898/93‑1 (MQ=255)
cTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaa > 2:2968457/1‑93 (MQ=255)
aTCGGCTTGGACGGCGGCATCGGCGGCCTGGTTCACCTGTCTGGCATCTCCTGGAGCGTTGCAGGGGAGGAAGCAGTTCGTGAATACaaaaaa > 2:5016660/1‑93 (MQ=255)
aTCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGGATACaaaaaa > 2:372638/1‑93 (MQ=255)
aTCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaaaaaa < 2:2927843/93‑1 (MQ=255)
tCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAg < 1:2496954/93‑1 (MQ=255)
cGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAgg > 1:5402359/1‑93 (MQ=255)
cGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAgg > 2:1845183/1‑93 (MQ=255)
cGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAgg < 1:2658215/93‑1 (MQ=255)
cGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAgg < 2:2821332/93‑1 (MQ=255)
ggCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGc > 2:5674523/1‑93 (MQ=255)
ggCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGc < 2:4340108/93‑1 (MQ=255)
ggCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGc > 1:4925993/1‑93 (MQ=255)
ggCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGATCGTGAATACAAAAAATGc > 1:4282358/1‑93 (MQ=255)
gCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGcg < 1:878219/93‑1 (MQ=255)
gttGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGcga < 2:2029518/92‑1 (MQ=255)
ggACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGcgacga < 2:5212928/93‑1 (MQ=255)
ggACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGcgacga < 1:2455323/93‑1 (MQ=255)
aCGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGaaa < 2:6400175/93‑1 (MQ=255)
cggcggCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAAt < 1:5117586/93‑1 (MQ=255)
ggcggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATc < 2:6062398/93‑1 (MQ=255)
gcggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCg > 1:3474859/1‑93 (MQ=255)
cggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGc < 1:3611499/93‑1 (MQ=255)
cggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGc > 2:2414733/1‑93 (MQ=255)
ggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCt < 2:5860658/93‑1 (MQ=255)
gcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTg > 1:315856/1‑93 (MQ=255)
gcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTg < 1:4083532/93‑1 (MQ=255)
aTCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCa < 1:6013993/93‑1 (MQ=255)
cGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAgt < 1:5514585/93‑1 (MQ=255)
cGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAgt > 2:5501706/1‑93 (MQ=255)
caCGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAgtt < 1:1509612/92‑1 (MQ=255)
aCGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAgttg > 1:4004038/1‑93 (MQ=255)
cGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAgttgt < 2:687177/93‑1 (MQ=255)
ggCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAgttgtt < 2:82513/93‑1 (MQ=255)
gtcTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTc > 2:590325/3‑93 (MQ=255)
gCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTc < 2:1116203/93‑1 (MQ=255)
ccTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCt < 1:5581656/93‑1 (MQ=255)
ccTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCt < 2:4249794/93‑1 (MQ=255)
tGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGc < 1:5139771/93‑1 (MQ=255)
tGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGc > 1:332715/1‑93 (MQ=255)
gTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAg > 1:6056836/1‑93 (MQ=255)
gTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAg < 1:5623207/93‑1 (MQ=255)
cACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGtt < 2:4563786/93‑1 (MQ=255)
cACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGtt < 2:5957088/93‑1 (MQ=255)
aCCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTg < 2:1006465/93‑1 (MQ=255)
aCCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTg > 2:4743195/1‑93 (MQ=255)
aCCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTg < 1:111003/93‑1 (MQ=255)
ccTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGa > 2:6128591/1‑93 (MQ=255)
cTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAATAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGAc < 2:4644786/93‑1 (MQ=255)
cTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGAc < 1:4512704/93‑1 (MQ=255)
cTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGAc > 2:3830058/1‑93 (MQ=255)
tGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACg < 2:357665/93‑1 (MQ=255)
gTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGc < 1:4738922/93‑1 (MQ=255)
tCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCa < 1:570720/93‑1 (MQ=255)
tGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAga < 2:173895/93‑1 (MQ=255)
gACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaa < 1:2835103/93‑1 (MQ=255)
aCATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaac < 1:2237656/93‑1 (MQ=255)
aCATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaac < 2:875133/93‑1 (MQ=255)
aTCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgt < 1:765984/93‑1 (MQ=255)
tctcCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgtg > 1:4030418/1‑93 (MQ=255)
tcCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCCgaacgtgaa > 1:1598521/1‑93 (MQ=255)
tcCTGGAGCGTAGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgtgaa < 1:4612266/93‑1 (MQ=255)
ccTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgtgaac < 1:5772308/93‑1 (MQ=255)
ggAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTa < 2:579509/93‑1 (MQ=255)
ggAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTa > 1:4473102/1‑93 (MQ=255)
ggAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTa > 2:6291211/1‑93 (MQ=255)
|
GTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTA > NC_000913/962323‑962502
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCTC > NC_000913/962320‑962506
|
AAGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAG < SRR4302534.5775462/94‑1 (MQ=60)
AAGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGGTCACCTGTCTGACATCTCCTGGAG > SRR4302534.4614591/1‑94 (MQ=60)
AGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGC < SRR4302534.1499194/94‑1 (MQ=60)
GGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCG < SRR4302534.3744109/94‑1 (MQ=60)
GGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCG > SRR4302534.4081829/1‑94 (MQ=60)
GGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCG < SRR4302534.6515005/94‑1 (MQ=60)
GTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGT > SRR4302534.5378457/1‑94 (MQ=60)
GTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGT > SRR4302534.3842397/1‑94 (MQ=60)
TAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGGTCACCTGTCTGACATCTCCTGGAGCGTT > SRR4302534.4887491/1‑94 (MQ=60)
AAAATCATGGCTATCACTGACTGCGGTATCTTCATCGGCTTGGACGTCGGCATCGACGGCCTGGTTCTCCTGTCTGACATCTCCTGGAGCGTTG < SRR4302534.2694776/94‑1 (MQ=60)
AAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTG > SRR4302534.1996249/1‑94 (MQ=60)
AAAATCAAGCCGATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTG < SRR4302534.5984854/94‑1 (MQ=60)
AAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGC < SRR4302534.6234100/94‑1 (MQ=60)
AAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGC < SRR4302534.4356825/94‑1 (MQ=60)
AAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGGTCACCTGTCTGACATCTCCTGGAGCGTTGC > SRR4302534.6561367/1‑94 (MQ=60)
AATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGGCAGCGGGATCGACGGCCTGGGTCACCTGTCTGACATCTCCTGGAGCGTTGCA > SRR4302534.5901805/1‑94 (MQ=60)
AATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCA < SRR4302534.1711869/94‑1 (MQ=60)
AATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCA > SRR4302534.5981564/1‑94 (MQ=60)
ATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGGATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAG > SRR4302534.410694/1‑94 (MQ=60)
ATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAG < SRR4302534.4788063/94‑1 (MQ=60)
ATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAG < SRR4302534.2024871/94‑1 (MQ=60)
AGCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAG < SRR4302534.479205/94‑1 (MQ=60)
CAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGC < SRR4302534.5275539/94‑1 (MQ=60)
AAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCG > SRR4302534.1637503/1‑94 (MQ=60)
AAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCG > SRR4302534.113110/1‑94 (MQ=60)
AAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCG > SRR4302534.2128655/1‑94 (MQ=60)
AGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGA < SRR4302534.2926920/94‑1 (MQ=60)
GTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGGA > SRR4302534.1139727/1‑94 (MQ=60)
CTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGGTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGA > SRR4302534.2548370/1‑94 (MQ=60)
TATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGGAGAA > SRR4302534.1297768/1‑94 (MQ=60)
TATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAA < SRR4302534.2253620/94‑1 (MQ=60)
TCACTGACTTCGGTATCTTCATCGGCTTGGACGGGGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGgaga > SRR4302534.4741071/1‑90 (MQ=60)
TCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGGAGGAGC > SRR4302534.6242893/1‑94 (MQ=60)
CACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCA > SRR4302534.2578621/1‑94 (MQ=60)
CACTGACTTCGGTATCTTCATCGGCTTGGACCGCGGCATTGACGGCCTGGGTCACCTCGCTGACAGTTCCTGGAGCGTTGGCGGCGAAGAAGCA > SRR4302534.5858645/1‑94 (MQ=42)
CCTGACGTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAG < SRR4302534.5756529/94‑1 (MQ=60)
ACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAG < SRR4302534.1166701/94‑1 (MQ=60)
CTGACTTCGGTATCTTCATCGGCTTGGACGGTGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGT < SRR4302534.3317733/94‑1 (MQ=60)
CTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGT > SRR4302534.3950993/1‑94 (MQ=60)
CTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGT > SRR4302534.6085566/1‑94 (MQ=60)
TGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTT < SRR4302534.4795875/94‑1 (MQ=60)
TGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTT < SRR4302534.3076801/94‑1 (MQ=60)
TGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTT > SRR4302534.3206153/1‑94 (MQ=60)
GACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTC < SRR4302534.5759756/94‑1 (MQ=60)
GACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGGTC > SRR4302534.4578907/1‑94 (MQ=60)
ACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCG < SRR4302534.3082541/94‑1 (MQ=60)
ACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCG > SRR4302534.6074787/1‑94 (MQ=60)
ACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCG < SRR4302534.4016345/94‑1 (MQ=60)
ACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCG > SRR4302534.1358401/1‑94 (MQ=60)
CTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGT > SRR4302534.3927862/1‑94 (MQ=60)
CGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAA > SRR4302534.4461989/1‑94 (MQ=60)
CGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAA > SRR4302534.1798853/1‑94 (MQ=60)
GGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAAT > SRR4302534.4611779/1‑94 (MQ=60)
GGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAAT > SRR4302534.6621662/1‑94 (MQ=60)
GTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATA < SRR4302534.5515041/94‑1 (MQ=60)
TATCTTCATCGGCTTGGACGGGGGCATCGGGGGCCTGGTTCACCCGTCTCACATCTCCTGGAGCGTTGCAGGCGAAAAAGCAGTTCGTGAATAC > SRR4302534.3983592/1‑94 (MQ=60)
TATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATAC < SRR4302534.1136989/94‑1 (MQ=60)
TATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATAC < SRR4302534.356066/94‑1 (MQ=60)
TCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAA < SRR4302534.2490348/94‑1 (MQ=60)
ATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAG < SRR4302534.3799871/94‑1 (MQ=60)
TCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGG < SRR4302534.2563269/94‑1 (MQ=60)
TCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGG > SRR4302534.5547764/1‑94 (MQ=60)
CGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGG > SRR4302534.823590/1‑94 (MQ=60)
CGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGC < SRR4302534.2728483/94‑1 (MQ=60)
CGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGC > SRR4302534.5059508/1‑94 (MQ=60)
CGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGATCGTGAATACAAAAAATGC > SRR4302534.4398311/1‑94 (MQ=60)
GGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCG < SRR4302534.5984872/94‑1 (MQ=60)
GGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCG < SRR4302534.5844164/94‑1 (MQ=60)
GCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGA < SRR4302534.900426/94‑1 (MQ=60)
TGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGA > SRR4302534.4457245/1‑94 (MQ=60)
TGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGA > SRR4302534.4172873/1‑94 (MQ=60)
GGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAA < SRR4302534.2520562/94‑1 (MQ=60)
CGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATC < SRR4302534.5255723/94‑1 (MQ=60)
GGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCG > SRR4302534.3568263/1‑94 (MQ=60)
CGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCT < SRR4302534.3708617/94‑1 (MQ=60)
CGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCT < SRR4302534.617264/94‑1 (MQ=60)
GGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTG > SRR4302534.323992/1‑94 (MQ=60)
GGCATCGACGGCCTGGCTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTG > SRR4302534.5209583/1‑94 (MQ=60)
GCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGC < SRR4302534.3673684/94‑1 (MQ=60)
GCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGC < SRR4302534.4193172/94‑1 (MQ=60)
ATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAG < SRR4302534.6177405/94‑1 (MQ=60)
ATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAG < SRR4302534.5832445/94‑1 (MQ=60)
ATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAG > SRR4302534.6086177/1‑94 (MQ=60)
CGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTT < SRR4302534.3442811/94‑1 (MQ=60)
CGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTT < SRR4302534.5663359/94‑1 (MQ=60)
GACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTG > SRR4302534.4111250/1‑94 (MQ=60)
CACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTG < SRR4302534.1549304/94‑1 (MQ=60)
ACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGT < SRR4302534.5676240/94‑1 (MQ=60)
ACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGT < SRR4302534.1345986/94‑1 (MQ=60)
GGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTC > SRR4302534.4913991/1‑94 (MQ=60)
GCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCT < SRR4302534.960704/94‑1 (MQ=60)
GCCTGGTTCACCTGTCTGACATCTCCTGGAGCATTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCT < SRR4302534.4673288/94‑1 (MQ=60)
CCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTG < SRR4302534.393066/94‑1 (MQ=60)
CCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTG < SRR4302534.5732467/94‑1 (MQ=60)
CTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGC > SRR4302534.341264/1‑94 (MQ=60)
TGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCA < SRR4302534.5278476/94‑1 (MQ=60)
TGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCA < SRR4302534.1611083/94‑1 (MQ=60)
GGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAG > SRR4302534.6221542/1‑94 (MQ=60)
GTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGG < SRR4302534.3227114/94‑1 (MQ=60)
GTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGG < SRR4302534.5775374/94‑1 (MQ=60)
TCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTT < SRR4302534.4837245/94‑1 (MQ=60)
TCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTT < SRR4302534.891101/94‑1 (MQ=60)
ACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGA < SRR4302534.113964/94‑1 (MQ=60)
ACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGA < SRR4302534.1842861/94‑1 (MQ=60)
CCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGAC < SRR4302534.5665856/94‑1 (MQ=60)
CCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGAC < SRR4302534.5633290/94‑1 (MQ=60)
CCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGAC > SRR4302534.1516479/1‑94 (MQ=60)
CTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACG < SRR4302534.20337/94‑1 (MQ=60)
CTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACG < SRR4302534.2766352/94‑1 (MQ=60)
CTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACG < SRR4302534.4634929/94‑1 (MQ=60)
GTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCA < SRR4302534.4867579/94‑1 (MQ=60)
GTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTACAGTTGTTCTGCAGGTTGACGCA > SRR4302534.2397444/1‑94 (MQ=60)
TCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAG < SRR4302534.584718/94‑1 (MQ=60)
TCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAG < SRR4302534.6329097/94‑1 (MQ=60)
CTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGA > SRR4302534.5955060/1‑94 (MQ=60)
CTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGA > SRR4302534.3134971/1‑94 (MQ=60)
GACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAAC > SRR4302534.4531021/1‑94 (MQ=60)
GACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAAC < SRR4302534.574651/94‑1 (MQ=60)
GACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAAC < SRR4302534.2909585/94‑1 (MQ=60)
GCATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACG < SRR4302534.733897/94‑1 (MQ=60)
ACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACG < SRR4302534.2296951/94‑1 (MQ=60)
ATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTG > SRR4302534.4138469/1‑94 (MQ=60)
ATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTG < SRR4302534.785016/94‑1 (MQ=60)
CTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCCGAACGTGAA > SRR4302534.1640287/1‑94 (MQ=60)
CTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAA < SRR4302534.2865900/94‑1 (MQ=60)
TCCTGGAGCGTAGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAAC < SRR4302534.4737441/94‑1 (MQ=60)
CCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACG < SRR4302534.5928900/94‑1 (MQ=60)
TGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTA > SRR4302534.4594098/1‑94 (MQ=60)
TGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTA < SRR4302534.4280929/94‑1 (MQ=60)
GGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTAT > SRR4302534.73463/1‑94 (MQ=60)
GAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATC < SRR4302534.1985049/94‑1 (MQ=60)
GAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATC < SRR4302534.1006337/94‑1 (MQ=60)
GAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATC > SRR4302534.898011/1‑94 (MQ=60)
GAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATC < SRR4302534.270738/94‑1 (MQ=60)
GAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATC > SRR4302534.6068520/1‑94 (MQ=60)
AGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGTTTGACGCAGAACGTGAACGTATCT < SRR4302534.6626850/94‑1 (MQ=60)
AGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCT < SRR4302534.5074535/94‑1 (MQ=60)
AGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCT > SRR4302534.3808709/1‑94 (MQ=60)
GCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCTC > SRR4302534.821540/1‑94 (MQ=60)
|
AAGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCTC > NC_000913/962320‑962506
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
