Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
962,413 |
A→G |
N399S (AAC→AGC) |
rpsA → |
30S ribosomal subunit protein S1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 962,413 | 0 | A | G | 100.0%
| 958.1
/ NA
| 280 | N399S (AAC→AGC) | rpsA | 30S ribosomal subunit protein S1 |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (127/153); total (127/153) |
Only 100 of 304 total aligned reads displayed.
GTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTA > NC_000913/962323‑962502
|
tAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGGATCGACGGCCTGGCTCACCTGTCTGACATCTCCTGGAGCGt > 1:329904/1‑93 (MQ=255)
aaaTCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTg > 1:7633788/1‑93 (MQ=255)
aaTCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGc < 2:3514311/93‑1 (MQ=255)
atacaGTCTATCCCTGTTTTCGGTGTCTTCATCGGCTTGGACGTCGGCATCGACGGCCTGGTTCACCTGTCTGACGTCTCCTGGAGCGTTGCa < 2:7588853/89‑1 (MQ=255)
tCAAGTCTATCACTGACTTCTGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAg > 1:7303185/1‑93 (MQ=255)
tCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAg > 1:1403010/1‑93 (MQ=255)
tCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATATCCTGGAGCGTTGCAg > 1:4180936/1‑93 (MQ=255)
gTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCga < 2:3573109/93‑1 (MQ=255)
gTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCga < 2:3126761/93‑1 (MQ=255)
cTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGGTGCAGGCgaag > 2:3851272/1‑93 (MQ=255)
tATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCCTCGACGGCCTGGTTCACCCGTCTGACATATCCCGGAGCGATGCAGCCgaaga > 1:2167072/1‑93 (MQ=255)
tATCACTGACTTCGGTATCTGCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCgaaga < 2:8386390/93‑1 (MQ=255)
aTCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCgaagaa < 2:6581388/93‑1 (MQ=255)
aTCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCgaagaa < 2:6270816/93‑1 (MQ=255)
aTCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCgaagaa > 1:867357/1‑93 (MQ=255)
aTCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCgaagaa > 1:3933427/1‑93 (MQ=255)
cACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGc < 2:1168267/93‑1 (MQ=255)
aCTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCa < 2:7521535/93‑1 (MQ=255)
tgccTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGt < 2:6816712/90‑1 (MQ=255)
tGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGt < 1:6627277/93‑1 (MQ=255)
gACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGtt > 1:2572883/1‑93 (MQ=255)
gACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGtt > 1:4283522/1‑93 (MQ=255)
cTTCGGTATCTTCATCGGCTTGGACGGCGGCATCTACGGCCTGGTTCACCTGTCTGACATCTCCTGTAGCGTTGCAGGCGAAGAAGCAGTTCg > 2:4468802/1‑93 (MQ=255)
cTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTTACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCg > 2:7708208/1‑93 (MQ=255)
ttCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGt > 1:5244510/1‑93 (MQ=255)
ttCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGt < 2:1307171/93‑1 (MQ=255)
ttCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGt < 1:3543452/93‑1 (MQ=255)
gTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAAt > 2:2211571/1‑93 (MQ=255)
gTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAAt > 1:3071237/1‑93 (MQ=255)
gTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAAt < 2:5629927/93‑1 (MQ=255)
gTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGCTCGTGAAt > 1:7136579/1‑93 (MQ=255)
gTATCTTCATCGGCTTGGACGGCCGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCACGCGAAGAAGCAGTTCGTGAAt < 1:2542181/93‑1 (MQ=255)
tATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATa > 2:16291/1‑93 (MQ=255)
aTCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTCGCTTACATCTCCTGGAGCGTTGCAGGTGAAAGAGCAAGTCATGaaata > 2:7002949/1‑90 (MQ=255)
ttCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaaa < 2:8082220/93‑1 (MQ=255)
ttCATCGGCTTGGACGGCGGCATCGACGGCCTGGGTCACCTGTCTGACCTCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaaa > 1:3863235/1‑93 (MQ=255)
ttCATCGGCTTGGACGGCCGCATCGACGGCCTGGGTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaaa > 2:7662156/1‑93 (MQ=255)
tCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATaaaaaa > 2:3699376/1‑93 (MQ=255)
tCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaaaa > 2:3394722/1‑93 (MQ=255)
tCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaaaa > 2:7327786/1‑93 (MQ=255)
tCATCGGCTTGGACGGCGGCATCGACGGCCTGGGTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaaaa > 2:3943166/1‑93 (MQ=255)
cATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaaaaa > 1:5057573/1‑93 (MQ=255)
cATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaaaaa > 1:5769026/1‑93 (MQ=255)
aTCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCGGGCGAAGAAGCAGTTCGTGAATACaaaaaa < 1:1249235/93‑1 (MQ=255)
aTCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaaaaaa > 1:7480656/1‑93 (MQ=255)
aTCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACaaaaaa > 2:4591593/1‑93 (MQ=255)
tCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAg < 1:7996248/93‑1 (MQ=255)
ggCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGc < 2:3005887/93‑1 (MQ=255)
gcgtGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGcg < 1:1887770/90‑1 (MQ=255)
gCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGcg > 2:6765901/1‑93 (MQ=255)
gCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGcg > 2:3812168/1‑93 (MQ=255)
cTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGcga < 2:5243679/93‑1 (MQ=255)
cTTGGACGGCGGCATCGACGGCCTGGATCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGcga > 2:4214147/1‑93 (MQ=255)
ggACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGcgacga > 1:2894936/1‑93 (MQ=255)
gACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGaa > 1:6333965/1‑93 (MQ=255)
aCGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGaaa < 1:474622/93‑1 (MQ=255)
cggcggCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAAt < 2:3065740/93‑1 (MQ=255)
ggcggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATc > 1:5517472/1‑93 (MQ=255)
ggcggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATc > 2:3214262/1‑93 (MQ=255)
ggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCt < 1:6715166/93‑1 (MQ=255)
gcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTg > 2:6871690/1‑93 (MQ=255)
cATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGc > 2:291571/1‑93 (MQ=255)
aTCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCa > 1:6795392/1‑93 (MQ=255)
aTCGACGGCCTGGTTCACCTGTCTGACAGCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTTCa < 2:6121368/93‑1 (MQ=255)
cGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAgt < 2:1756996/93‑1 (MQ=255)
aCGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAgttg < 2:4285254/93‑1 (MQ=255)
ggCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAgttgtt > 1:6852923/1‑93 (MQ=255)
gCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTc < 2:4847276/93‑1 (MQ=255)
gCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTc > 2:1493598/1‑93 (MQ=255)
gCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTc > 1:7478385/1‑93 (MQ=255)
gCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTc < 1:3655497/93‑1 (MQ=255)
cTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTg > 1:992394/1‑93 (MQ=255)
gTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAg > 1:6547895/1‑93 (MQ=255)
ttCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAgg > 2:5979716/1‑93 (MQ=255)
ttCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTCCAgg > 1:1129736/1‑93 (MQ=255)
tCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGt < 2:2612875/93‑1 (MQ=255)
cACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGtt < 1:148119/93‑1 (MQ=255)
ccTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGa > 2:253667/1‑93 (MQ=255)
ccTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGa > 2:2434718/1‑93 (MQ=255)
ccTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGa < 2:8178795/93‑1 (MQ=255)
tGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACg < 1:3153268/93‑1 (MQ=255)
tCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTTCAGGTTGACGCa < 1:2738600/93‑1 (MQ=255)
cTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAg < 1:8171905/93‑1 (MQ=255)
tGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAga < 2:6469434/93‑1 (MQ=255)
tGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAga > 1:6439287/1‑93 (MQ=255)
tGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAga > 2:7159339/1‑93 (MQ=255)
tGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAga > 2:900265/1‑93 (MQ=255)
cgACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAga < 2:2814713/92‑1 (MQ=255)
gACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaa > 2:2743902/1‑93 (MQ=255)
cATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacg > 1:8568648/1‑93 (MQ=255)
aTCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgt < 1:3435062/93‑1 (MQ=255)
aTCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgt > 1:1622382/1‑93 (MQ=255)
tcCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgtgaa < 1:8031431/93‑1 (MQ=255)
tcCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgtgaa < 2:5906059/93‑1 (MQ=255)
tcCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgtgaa < 2:2054222/93‑1 (MQ=255)
ccTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgtgaac < 1:7359151/93‑1 (MQ=255)
ccTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgtgaac < 1:7733726/93‑1 (MQ=255)
ccTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgtgaac < 2:6673639/93‑1 (MQ=255)
ccTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAgaacgtgaac < 2:1396892/93‑1 (MQ=255)
cTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGTCGCAgaacgtgaacg > 1:8683925/1‑93 (MQ=255)
|
GTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTA > NC_000913/962323‑962502
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCT > NC_000913/962320‑962505
|
AAGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAG < SRR4302541.5354041/94‑1 (MQ=60)
AAGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAG > SRR4302541.6772304/1‑94 (MQ=60)
AGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGC > SRR4302541.6160162/1‑94 (MQ=60)
GGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGCTCACCTGTCTGACATCTCCTGGAGCG > SRR4302541.4317368/1‑94 (MQ=60)
GTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGGATCGACGGCCTGGCTCACCTGTCTGACATCTCCTGGAGCGT > SRR4302541.332863/1‑94 (MQ=60)
TAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTT < SRR4302541.6506410/94‑1 (MQ=60)
TAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTT < SRR4302541.3579390/94‑1 (MQ=60)
TAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTT < SRR4302541.4214221/94‑1 (MQ=60)
TAAAATCAAGTCTATCACTGACTTCGGTATCTTCAGCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTT < SRR4302541.4214220/94‑1 (MQ=60)
AAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTG > SRR4302541.7715223/1‑94 (MQ=60)
AAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTG > SRR4302541.8774179/1‑94 (MQ=60)
AAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTTGCATCTCCTGGCGCGTTGC > SRR4302541.6895252/1‑94 (MQ=60)
AATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCCGGTTCACCTGTCTGACATCTCCTGGCGCGTTGCA > SRR4302541.3636670/1‑94 (MQ=60)
ATCAAGTCTATCACTGACTTCTGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAG > SRR4302541.7381149/1‑94 (MQ=60)
ATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAG > SRR4302541.1416719/1‑94 (MQ=60)
ATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATATCCTGGAGCGTTGCAG > SRR4302541.4222405/1‑94 (MQ=60)
TCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGG < SRR4302541.8691518/94‑1 (MQ=60)
TCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGG < SRR4302541.6485542/94‑1 (MQ=60)
TCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAG < SRR4302541.4563007/94‑1 (MQ=60)
CTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCCTCGACGGCCTGGTTCACCCGTCTGACATATCCCGGAGCGATGCAGCCGAAGA > SRR4302541.2188027/1‑94 (MQ=60)
CTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGA < SRR4302541.1435144/94‑1 (MQ=60)
TATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAA > SRR4302541.3972602/1‑94 (MQ=60)
TATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAA > SRR4302541.875241/1‑94 (MQ=60)
NTCACTGNCTTCGGTATCTTNNTNGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAG < SRR4302541.1573759/94‑1 (MQ=60)
CACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGGCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGGAGAAGCG > SRR4302541.6603767/1‑94 (MQ=60)
CACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCA < SRR4302541.3175187/94‑1 (MQ=60)
CACTGAATTCGGTATCTTCATCGGCTTGGACGGGGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCA < SRR4302541.483467/94‑1 (MQ=60)
CCTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAG < SRR4302541.903493/94‑1 (MQ=60)
ACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAG < SRR4302541.8773354/94‑1 (MQ=60)
TGACTTGGGTATCTTCATCGGCTTGGACGGCGGCATCGGCGGCCTGGTTCACCTGTCTGACATCTCCTGGAGAGTTGCAGGCGACGAAGCAGTT > SRR4302541.4326301/1‑94 (MQ=60)
TGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTT > SRR4302541.2598681/1‑94 (MQ=60)
TGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTT < SRR4302541.6695221/94‑1 (MQ=60)
TGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTT > SRR4302541.4326300/1‑94 (MQ=60)
TACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTC < SRR4302541.8680653/94‑1 (MQ=60)
GACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAATTC > SRR4302541.8664941/1‑94 (MQ=60)
GACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCCGGAGCGTTGCCGGGGGAGAAGCAGATC > SRR4302541.3185914/1‑94 (MQ=60)
CTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGT > SRR4302541.5298553/1‑94 (MQ=60)
CTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGT > SRR4302541.7185912/1‑94 (MQ=60)
CTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGT < SRR4302541.1659723/94‑1 (MQ=60)
TTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTG > SRR4302541.2779139/1‑94 (MQ=60)
TTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTG > SRR4302541.3989122/1‑94 (MQ=60)
TTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTG < SRR4302541.3579213/94‑1 (MQ=60)
TCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGA < SRR4302541.384005/94‑1 (MQ=60)
TCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGA < SRR4302541.8115058/94‑1 (MQ=60)
CGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAA > SRR4302541.6913245/1‑94 (MQ=60)
GGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAAT > SRR4302541.3102390/1‑94 (MQ=60)
GGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAAT < SRR4302541.7364800/94‑1 (MQ=60)
GGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAAT > SRR4302541.3938072/1‑94 (MQ=60)
GGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGCTCGTGAAT > SRR4302541.7212624/1‑94 (MQ=60)
GTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATA > SRR4302541.2900288/1‑94 (MQ=60)
GTATCTTCATCGGCTTGGACGGCCGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCACGCGAAGAAGCAGTTCGTGAATA < SRR4302541.2567691/94‑1 (MQ=60)
TATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATAC < SRR4302541.544572/94‑1 (MQ=60)
TATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATAC < SRR4302541.512473/94‑1 (MQ=60)
ATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACA > SRR4302541.7560103/1‑94 (MQ=60)
ATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGGTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATAAA > SRR4302541.6515208/1‑94 (MQ=60)
ATCTTCATCGGCTTGGACGGCGGCATAGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACA > SRR4302541.7514917/1‑94 (MQ=60)
CTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGCAGCAGTTCGTGAATACAAA > SRR4302541.6482627/1‑94 (MQ=60)
CTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAA > SRR4302541.2585627/1‑94 (MQ=60)
CTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAA > SRR4302541.6641042/1‑94 (MQ=60)
CTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGGTCACCTGTCTGACCTCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAA > SRR4302541.3902095/1‑94 (MQ=60)
TTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAA > SRR4302541.7432326/1‑94 (MQ=60)
TTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAA > SRR4302541.7666425/1‑94 (MQ=60)
TCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAA > SRR4302541.5827725/1‑94 (MQ=60)
TCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAA > SRR4302541.5109595/1‑94 (MQ=60)
CATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCCGTTCGGGAATACAAAAAA > SRR4302541.2027342/1‑94 (MQ=60)
CATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAA > SRR4302541.7560678/1‑94 (MQ=60)
CATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAA > SRR4302541.7560680/1‑94 (MQ=60)
ATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCGGGCGAAGAAGCAGTTCGTGAATACAAAAAAG < SRR4302541.1261622/94‑1 (MQ=60)
ATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAG < SRR4302541.4834094/94‑1 (MQ=60)
TCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGG < SRR4302541.7242474/94‑1 (MQ=60)
TCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGG < SRR4302541.8084256/94‑1 (MQ=60)
CGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGC > SRR4302541.3405940/1‑94 (MQ=60)
CGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGC > SRR4302541.3239475/1‑94 (MQ=60)
GCGTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGA < SRR4302541.1905902/94‑1 (MQ=60)
CTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGAC < SRR4302541.3907415/94‑1 (MQ=60)
TGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGA > SRR4302541.2924026/1‑94 (MQ=60)
TGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGA < SRR4302541.3863591/94‑1 (MQ=60)
GGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAA > SRR4302541.6398716/1‑94 (MQ=60)
GGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAA < SRR4302541.5707150/94‑1 (MQ=60)
ACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAAT < SRR4302541.479128/94‑1 (MQ=60)
ACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAAT < SRR4302541.1299138/94‑1 (MQ=60)
CGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATC > SRR4302541.5573954/1‑94 (MQ=60)
GGCGGCATCGACGGCCTGGTTCGCCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCG < SRR4302541.4523750/94‑1 (MQ=60)
GGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTG < SRR4302541.6786805/94‑1 (MQ=60)
GGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTG < SRR4302541.6786806/94‑1 (MQ=60)
GGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTG < SRR4302541.1172810/94‑1 (MQ=60)
GGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTG < SRR4302541.7865462/94‑1 (MQ=60)
GCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGC < SRR4302541.4245397/94‑1 (MQ=60)
CATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCA > SRR4302541.6868064/1‑94 (MQ=60)
ATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAG > SRR4302541.2740545/1‑94 (MQ=60)
CGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTT > SRR4302541.2948430/1‑94 (MQ=60)
CGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTT < SRR4302541.7192295/94‑1 (MQ=60)
CGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTT < SRR4302541.738335/94‑1 (MQ=60)
ACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGT < SRR4302541.5642785/94‑1 (MQ=60)
ACGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGT < SRR4302541.8211517/94‑1 (MQ=60)
CGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTT > SRR4302541.6926167/1‑94 (MQ=60)
CGGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTT > SRR4302541.8199854/1‑94 (MQ=60)
GGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTC > SRR4302541.7558387/1‑94 (MQ=60)
GGCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTC < SRR4302541.6637954/94‑1 (MQ=60)
GCCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCT < SRR4302541.3692579/94‑1 (MQ=60)
CCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTG > SRR4302541.3574499/1‑94 (MQ=60)
CCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTG > SRR4302541.5660330/1‑94 (MQ=60)
CCTGGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTG > SRR4302541.1001633/1‑94 (MQ=60)
GGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAG < SRR4302541.8643552/94‑1 (MQ=60)
GGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAG > SRR4302541.2309944/1‑94 (MQ=60)
GGTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAG > SRR4302541.6614795/1‑94 (MQ=60)
GTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGG < SRR4302541.1635062/94‑1 (MQ=60)
GTTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTCCAGG > SRR4302541.1140414/1‑94 (MQ=60)
TTCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGT < SRR4302541.8102862/94‑1 (MQ=60)
TCACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTT < SRR4302541.3148485/94‑1 (MQ=60)
CACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTG < SRR4302541.149244/94‑1 (MQ=60)
CACCTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTG < SRR4302541.7743302/94‑1 (MQ=60)
CTGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACG < SRR4302541.8653816/94‑1 (MQ=60)
TGTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGC < SRR4302541.3185099/94‑1 (MQ=60)
GTCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCA < SRR4302541.2957530/94‑1 (MQ=60)
TCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTTCAGGTTGACGCAG < SRR4302541.2766054/94‑1 (MQ=60)
TCTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAG < SRR4302541.2255101/94‑1 (MQ=60)
CTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGA < SRR4302541.8261133/94‑1 (MQ=60)
CTGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGA > SRR4302541.6504911/1‑94 (MQ=60)
TGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAA > SRR4302541.5924532/1‑94 (MQ=60)
TGACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAA < SRR4302541.7987545/94‑1 (MQ=60)
GACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAAC > SRR4302541.992570/1‑94 (MQ=60)
GACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAAC > SRR4302541.5489468/1‑94 (MQ=60)
ACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACG < SRR4302541.7496123/94‑1 (MQ=60)
ACATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACG > SRR4302541.8660686/1‑94 (MQ=60)
CATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGT > SRR4302541.3537580/1‑94 (MQ=60)
CATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGT > SRR4302541.1159422/1‑94 (MQ=60)
CATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGT > SRR4302541.1638472/1‑94 (MQ=60)
ATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTG < SRR4302541.3469378/94‑1 (MQ=60)
ATCTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTG > SRR4302541.7718141/1‑94 (MQ=60)
CTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAA > SRR4302541.3463409/1‑94 (MQ=60)
CTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAA < SRR4302541.6794869/94‑1 (MQ=60)
CTCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAA < SRR4302541.1350011/94‑1 (MQ=60)
TCCTGGCGCGTTGCGGGCGCAGAAGCAGTTCGTGAATCCACAAAAGGCGACGAAATCGCTGCTGTTGTTCTGCCGGTTGCCGCCGAACGTGAAC < SRR4302541.6775282/94‑1 (MQ=46)
TCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAAC < SRR4302541.8119726/94‑1 (MQ=60)
TCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAAC < SRR4302541.2179690/94‑1 (MQ=60)
TCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAAC < SRR4302541.2653210/94‑1 (MQ=60)
TCCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAAC < SRR4302541.1491467/94‑1 (MQ=60)
CCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGCAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGACCGTGAACG > SRR4302541.2582216/1‑94 (MQ=60)
CCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGTCGCAGAACGTGAACG > SRR4302541.8776848/1‑94 (MQ=60)
CCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACG < SRR4302541.7603144/94‑1 (MQ=60)
CCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACG < SRR4302541.7816011/94‑1 (MQ=60)
CCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACG < SRR4302541.7437784/94‑1 (MQ=60)
CCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACG < SRR4302541.6772916/94‑1 (MQ=60)
CCTGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGCTGACGCAGAACGTGAACG > SRR4302541.5185111/1‑94 (MQ=60)
TGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTA < SRR4302541.1798646/94‑1 (MQ=60)
TGGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTA > SRR4302541.6093314/1‑94 (MQ=60)
GGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTAT > SRR4302541.970339/1‑94 (MQ=60)
GGAGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTAC > SRR4302541.2143429/1‑94 (MQ=60)
AGCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCT < SRR4302541.6604750/94‑1 (MQ=60)
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AAGGTAAAATCAAGTCTATCACTGACTTCGGTATCTTCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCT > NC_000913/962320‑962505
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
