Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
981,566 |
C→T |
R433C (CGC→TGC) |
ycbB → |
putative amidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 981,566 | 0 | C | T | 100.0%
| 842.0
/ NA
| 214 | R433C (CGC→TGC) | ycbB | putative amidase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (116/98); total (116/98) |
Only 100 of 218 total aligned reads displayed.
GGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCACGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAA > NC_000913/981476‑981655
|
ggtcgCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGc < 1:3824078/93‑1 (MQ=255)
ggtcgCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGc > 2:2186951/1‑93 (MQ=255)
gtcgCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCa > 1:3292885/1‑93 (MQ=255)
gtcgCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCa < 2:2908244/93‑1 (MQ=255)
tcgCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCaa > 1:6029746/1‑93 (MQ=255)
gCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAg > 1:60630/1‑93 (MQ=255)
gCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAg > 1:6167702/1‑93 (MQ=255)
gCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAg > 1:3046265/1‑93 (MQ=255)
cccccGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAg < 1:1409694/92‑1 (MQ=255)
ccGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGata < 1:546831/93‑1 (MQ=255)
ccGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGata > 1:5788551/1‑93 (MQ=255)
ccGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGata > 2:4124854/1‑93 (MQ=255)
cGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGatat < 1:1969610/93‑1 (MQ=255)
tgtCGAAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATAtt < 2:1283296/91‑1 (MQ=255)
gATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATAtt > 1:4149381/1‑93 (MQ=255)
gATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATAtt > 2:105298/1‑93 (MQ=255)
tCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCt < 1:3165845/93‑1 (MQ=255)
tCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCt < 1:4192059/93‑1 (MQ=255)
cGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTg > 2:3019364/1‑93 (MQ=255)
cGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTg < 2:487613/93‑1 (MQ=255)
ccAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGc < 2:4807624/92‑1 (MQ=255)
cAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGcc < 2:321408/93‑1 (MQ=255)
aaagCGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCa < 2:807242/93‑1 (MQ=255)
aaaaCGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCa > 1:2231802/1‑93 (MQ=255)
aaaCGCCGATGATGAGCAGTGCCCTTAACCACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCCACTCTGCCATGACAAGATATTCTGccca > 1:4546547/1‑91 (MQ=255)
aaaCGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCaa > 2:196357/1‑93 (MQ=255)
aaaCGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCaa > 2:3631187/1‑93 (MQ=255)
aaCGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCaaa > 2:2109273/1‑93 (MQ=255)
gcggataatGAGCAGTGCGTTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTCCCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGt < 1:630450/90‑1 (MQ=255)
gCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGt < 1:1218634/93‑1 (MQ=255)
ccGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTg > 1:4050800/1‑93 (MQ=255)
cGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTgc < 1:1498022/93‑1 (MQ=255)
cGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTgc < 2:5240959/93‑1 (MQ=255)
gatgatGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTgcg < 2:1401634/93‑1 (MQ=255)
gatgatGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTgcg > 1:5248879/1‑93 (MQ=255)
gatgaGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCaa > 1:500257/1‑93 (MQ=255)
tgaGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACg > 2:5063082/1‑93 (MQ=255)
gCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATc > 2:5624146/1‑93 (MQ=255)
gCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATc > 1:4403368/1‑93 (MQ=255)
aGTGCCCTTAACAACGTAGTGGTAAGCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCg < 2:2330738/93‑1 (MQ=255)
gTGCCCTTACCAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCgg < 1:378854/93‑1 (MQ=255)
gTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCgg < 2:6237982/93‑1 (MQ=255)
gTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCgg > 1:4391300/1‑93 (MQ=255)
tGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCggg < 2:5960479/93‑1 (MQ=255)
gCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGa < 2:666848/93‑1 (MQ=255)
cccTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGat < 1:428655/93‑1 (MQ=255)
cccTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGat > 1:4207151/1‑93 (MQ=255)
cTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGatat < 2:3271206/93‑1 (MQ=255)
ttAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATAtc > 2:85004/1‑93 (MQ=255)
ttAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATAtc < 1:1673180/93‑1 (MQ=255)
ttAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATAtc > 2:4702064/1‑93 (MQ=255)
aacaacGTAGTGTTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATAtctc < 2:5566428/93‑1 (MQ=255)
aacaacGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAGAAGTCCGCAACGATCCGGGATAtctc > 1:688152/1‑93 (MQ=255)
acaacGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCg > 1:4650707/1‑93 (MQ=255)
acaacGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGAACCGGGATATCTCg > 2:3664190/1‑93 (MQ=255)
caacGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGa > 1:2675184/1‑93 (MQ=255)
acGTAGTGGTAAACCCGCCGTGGAACGTACCTCCACCTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGaaa > 2:1919028/1‑93 (MQ=255)
acGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGaaa > 2:3999225/1‑93 (MQ=255)
aGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCa < 2:2973808/93‑1 (MQ=255)
gTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCAt > 2:4615481/1‑93 (MQ=255)
gTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGc < 2:542818/93‑1 (MQ=255)
aaaCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCta > 1:2899831/1‑93 (MQ=255)
aaaCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCta > 1:2377540/1‑93 (MQ=255)
accccGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCtat < 1:4008901/91‑1 (MQ=255)
aaCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCtat > 2:3371394/1‑93 (MQ=255)
aaCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCtat > 2:3707644/1‑93 (MQ=255)
aaCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCtat > 1:6414848/1‑93 (MQ=255)
aCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCtata < 2:4169407/93‑1 (MQ=255)
aCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCtata < 2:6138126/93‑1 (MQ=255)
aCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCtata > 1:358803/1‑93 (MQ=255)
ccgccgTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACg > 2:6019781/1‑93 (MQ=255)
cgccgTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACgg > 2:2833478/1‑93 (MQ=255)
cgccgTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACgg > 1:904159/1‑93 (MQ=255)
cgccgTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACgg > 2:1473273/1‑93 (MQ=255)
cgccgTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACgg > 2:264837/1‑93 (MQ=255)
gccgTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGt > 1:1616982/1‑93 (MQ=255)
ccgTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTg < 2:2364794/93‑1 (MQ=255)
cgTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGa < 2:1986029/93‑1 (MQ=255)
cgTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGa < 2:5861977/93‑1 (MQ=255)
gTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGAt > 2:3136305/1‑93 (MQ=255)
gAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATgcg > 1:3532351/1‑93 (MQ=255)
aaCGTCCCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATgcgc < 1:5154995/93‑1 (MQ=255)
aaCGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATgcgc > 1:1368406/1‑93 (MQ=255)
aCGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGcgcg < 1:1023901/93‑1 (MQ=255)
cGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCgg > 1:5610694/1‑93 (MQ=255)
aCCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTg > 1:1304190/1‑93 (MQ=255)
aCCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTg > 1:2758776/1‑93 (MQ=255)
ccTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTgg > 2:734771/1‑93 (MQ=255)
ccTCCAACTCTGGCATGCAAAGATATACTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTgg < 2:1299331/93‑1 (MQ=255)
cTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGa > 1:2865113/1‑93 (MQ=255)
tCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGaa > 2:5818363/1‑93 (MQ=255)
aaCTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAAcag > 1:2036414/1‑93 (MQ=255)
aCTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAAcagc > 2:3770201/1‑93 (MQ=255)
ctctGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAAcagca > 1:2441172/1‑93 (MQ=255)
tctGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAAcagcag > 1:6036165/1‑93 (MQ=255)
tGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAAGAGCagag > 2:2220864/1‑93 (MQ=255)
ggCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAgaga < 1:2995723/93‑1 (MQ=255)
ggCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAgaga > 2:245582/1‑93 (MQ=255)
ggCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAgaga < 1:4712998/93‑1 (MQ=255)
ggCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAgaga > 2:892621/1‑93 (MQ=255)
|
GGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCACGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAA > NC_000913/981476‑981655
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCACGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAAGCGA > NC_000913/981473‑981659
|
GTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTAAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCAT < SRR4302534.2898416/94‑1 (MQ=60)
TCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATG < SRR4302534.3896847/94‑1 (MQ=60)
TCGATCGCCATGATCCCAAAAGGCCGATGAGGAGAAGTGCTCTTAACAACGGAGTGGTAAGCCCGCCGTGGAACGTACCTCCAACTCTGGCATG < SRR4302534.5895808/94‑1 (MQ=46)
CGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGC > SRR4302534.3939982/1‑94 (MQ=60)
aggCGCCCCGATCCCAAAACGCCGATGATTACAAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCA < SRR4302534.1024559/91‑1 (MQ=60)
GGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCA > SRR4302534.2322216/1‑94 (MQ=60)
GGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCA > SRR4302534.3380706/1‑94 (MQ=60)
GGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCA < SRR4302534.3926806/94‑1 (MQ=60)
GTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAA > SRR4302534.6193598/1‑94 (MQ=60)
CGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAG > SRR4302534.6335451/1‑94 (MQ=60)
CGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAG > SRR4302534.2860014/1‑94 (MQ=60)
CGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAG > SRR4302534.62272/1‑94 (MQ=60)
CGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAG > SRR4302534.3126163/1‑94 (MQ=60)
CGCCCCGAGCGCAAATCGCTGATGATGAGCAGTGCCCTTAACAGCGTAGTGGTAAGCCCGGCGTGGAACGTACCTCCAACTCTGGCATGCAAAG < SRR4302534.1087826/94‑1 (MQ=60)
CCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGA < SRR4302534.1446778/94‑1 (MQ=60)
CCCCGATCGCAAAACGCCGATGATGGGCAGTGCCCTTAACAACGAAGTGGTAAACCCGCCGTGGCACCTACCTCCACCTCTGGCATGCAAACAT > SRR4302534.4990467/1‑94 (MQ=60)
CCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACACCGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGAT < SRR4302534.188318/94‑1 (MQ=60)
CCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGAT < SRR4302534.3112354/94‑1 (MQ=60)
CCCCAATCGCAAAACGCCGATGATGACAAGTGCCCTAAACAACGTAGTGGAAAGCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGAT < SRR4302534.2487897/94‑1 (MQ=60)
CCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATA > SRR4302534.5945584/1‑94 (MQ=60)
CCGATCGTAAAACCCCGATGATGAGCAGTGCCCTTAACAACGTAGTGATAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATAT < SRR4302534.3176155/94‑1 (MQ=60)
CCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATAT < SRR4302534.560333/94‑1 (MQ=60)
CGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATT > SRR4302534.4261393/1‑94 (MQ=60)
CGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATT > SRR4302534.4531907/1‑94 (MQ=60)
CGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATT < SRR4302534.2021168/94‑1 (MQ=60)
CGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATT < SRR4302534.3924942/94‑1 (MQ=60)
GATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTC < SRR4302534.2255230/94‑1 (MQ=60)
ATCGCAAAACGCCGATGATGGGCAGTGCCCTTAACAACGTAGTGGTAAGCCAGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCT < SRR4302534.6442694/94‑1 (MQ=60)
TCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTG < SRR4302534.3249319/94‑1 (MQ=60)
TCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTG > SRR4302534.3043768/1‑94 (MQ=60)
TCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTG < SRR4302534.4305308/94‑1 (MQ=60)
TCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTG < SRR4302534.1685599/94‑1 (MQ=60)
CAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCA > SRR4302534.2290914/1‑94 (MQ=60)
AAAACGCCGATGATGAGCAGTGCCCTTAACCACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCCACTCTGCCATGACAAGATATTCTGCCCA > SRR4302534.4669806/1‑94 (MQ=60)
GCGGATAATGAGCAGTGCGTTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTCCCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTG < SRR4302534.645742/94‑1 (MQ=60)
GCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTG < SRR4302534.1250714/94‑1 (MQ=60)
GCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTG < SRR4302534.2698404/94‑1 (MQ=60)
GCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTG > SRR4302534.4159434/1‑94 (MQ=60)
CGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCG < SRR4302534.1537452/94‑1 (MQ=60)
CGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCG > SRR4302534.5390672/1‑94 (MQ=60)
TGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAA > SRR4302534.512722/1‑94 (MQ=60)
TGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAA > SRR4302534.3641737/1‑94 (MQ=60)
ATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACG > SRR4302534.4706617/1‑94 (MQ=60)
GAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTTCCAAAAGTGCGCAACGAT > SRR4302534.4264373/1‑94 (MQ=60)
GGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATC < SRR4302534.2794301/94‑1 (MQ=60)
AGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATC > SRR4302534.4446461/1‑94 (MQ=60)
AGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATC > SRR4302534.4522189/1‑94 (MQ=60)
CAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCG > SRR4302534.6019302/1‑94 (MQ=60)
AGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCACCTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGG > SRR4302534.5563008/1‑94 (MQ=60)
AGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGG > SRR4302534.4509729/1‑94 (MQ=60)
GTGCCCTTACCAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGG < SRR4302534.388545/94‑1 (MQ=60)
GTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGG < SRR4302534.6199024/94‑1 (MQ=60)
TCCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGAT < SRR4302534.1442005/94‑1 (MQ=60)
GCCTTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGAT < SRR4302534.20320/94‑1 (MQ=60)
GCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGAT > SRR4302534.4320699/1‑94 (MQ=60)
GCCCTTAACAACGGAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACTATCCGGGAT > SRR4302534.5565320/1‑94 (MQ=60)
CCCTTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATA < SRR4302534.439599/94‑1 (MQ=60)
CCTTAAGACCGTAGTGATACACCCGCCGTGGAAGGTACCGCCAACCCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATAT < SRR4302534.2474637/94‑1 (MQ=60)
TTAACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCT < SRR4302534.5321749/94‑1 (MQ=60)
TTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCT < SRR4302534.1716715/94‑1 (MQ=60)
TAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAGAAGTCCGCAACGATCCGGGATATCTC > SRR4302534.704975/1‑94 (MQ=60)
AACAACGTAGTGGTAACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCG < SRR4302534.4396556/94‑1 (MQ=60)
AACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCG > SRR4302534.4776969/1‑94 (MQ=60)
ACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGA > SRR4302534.2745919/1‑94 (MQ=60)
AACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAA < SRR4302534.1272904/94‑1 (MQ=60)
AACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAA > SRR4302534.3755984/1‑94 (MQ=60)
ACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAG > SRR4302534.3249585/1‑94 (MQ=60)
AGTGTTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCAT < SRR4302534.669623/94‑1 (MQ=60)
AGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCAT < SRR4302534.3852633/94‑1 (MQ=60)
GGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGC > SRR4302534.1594410/1‑94 (MQ=60)
TAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTA > SRR4302534.2975935/1‑94 (MQ=60)
TAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTA > SRR4302534.4132127/1‑94 (MQ=60)
TAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTA > SRR4302534.2440692/1‑94 (MQ=60)
TAAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGAATATCTCGAAAGCCATGGCTA < SRR4302534.3038059/94‑1 (MQ=60)
AAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTAT > SRR4302534.815934/1‑94 (MQ=60)
AAACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTAT > SRR4302534.6587922/1‑94 (MQ=60)
ACCCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATA < SRR4302534.4116248/94‑1 (MQ=60)
AACCCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATA > SRR4302534.367964/1‑94 (MQ=60)
ACCCGCCGTGGAACGTCCCTCCAGCTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATAC < SRR4302534.5254556/94‑1 (MQ=60)
CCGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGG > SRR4302534.927115/1‑94 (MQ=60)
CGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGT > SRR4302534.1659168/1‑94 (MQ=60)
CGCCGTGGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGT > SRR4302534.4705342/1‑94 (MQ=60)
GGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCG > SRR4302534.6507916/1‑94 (MQ=60)
GGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCG < SRR4302534.1590622/94‑1 (MQ=60)
GGAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCG > SRR4302534.3627367/1‑94 (MQ=60)
GAACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGC > SRR4302534.1404454/1‑94 (MQ=60)
AACGTCCCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCG < SRR4302534.5294022/94‑1 (MQ=60)
AACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCG > SRR4302534.940532/1‑94 (MQ=60)
AACCTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCG > SRR4302534.6280183/1‑94 (MQ=60)
ACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGG > SRR4302534.5762481/1‑94 (MQ=60)
ACGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGG < SRR4302534.1050268/94‑1 (MQ=60)
CGTACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGC < SRR4302534.6203947/94‑1 (MQ=60)
TACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTG > SRR4302534.2831440/1‑94 (MQ=60)
TACCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTG > SRR4302534.1338600/1‑94 (MQ=60)
CCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGA > SRR4302534.5255025/1‑94 (MQ=60)
CCTCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGA > SRR4302534.2940364/1‑94 (MQ=60)
TCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAAC > SRR4302534.4317118/1‑94 (MQ=60)
TCCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAAC > SRR4302534.5760244/1‑94 (MQ=60)
CCAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACA > SRR4302534.4166082/1‑94 (MQ=60)
CAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAG > SRR4302534.4299171/1‑94 (MQ=60)
CAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAG < SRR4302534.3534444/94‑1 (MQ=60)
CAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAG > SRR4302534.2089664/1‑94 (MQ=60)
CAACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAG < SRR4302534.1483280/94‑1 (MQ=60)
ACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCA < SRR4302534.984899/94‑1 (MQ=60)
ACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCA > SRR4302534.2506055/1‑94 (MQ=60)
ACTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCCATACGGTGATGCGCGGCTGGAACAGCA > SRR4302534.4789881/1‑94 (MQ=60)
CTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAG > SRR4302534.6200214/1‑94 (MQ=60)
CTCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAG < SRR4302534.5080780/94‑1 (MQ=60)
TCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGA > SRR4302534.4518669/1‑94 (MQ=60)
TCTGGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGA > SRR4302534.2947433/1‑94 (MQ=60)
CTGTCATGCAAAGAGATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAG < SRR4302534.6267748/94‑1 (MQ=60)
GGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAA < SRR4302534.5868059/94‑1 (MQ=60)
GGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAA < SRR4302534.4840991/94‑1 (MQ=60)
GGCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAA < SRR4302534.3074052/94‑1 (MQ=60)
GCATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAAG < SRR4302534.1365670/94‑1 (MQ=60)
CATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAAGC < SRR4302534.271059/94‑1 (MQ=60)
ATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAAGCG > SRR4302534.5865528/1‑94 (MQ=60)
ATGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAAGCG < SRR4302534.4793119/94‑1 (MQ=60)
TGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAAGCGA < SRR4302534.4119161/94‑1 (MQ=60)
|
GTCGGTCGCCCCGATCGCAAAACGCCGATGATGAGCAGTGCCCTTAACAACGTAGTGGTAAACCCGCCGTGGAACGTACCTCCAACTCTGGCACGCAAAGATATTCTGCCAAAAGTGCGCAACGATCCGGGATATCTCGAAAGCCATGGCTATACGGTGATGCGCGGCTGGAACAGCAGAGAAGCGA > NC_000913/981473‑981659
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
