Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,010,324 |
A→G |
T380A (ACC→GCC) |
uup → |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,010,324 | 0 | A | G | 100.0%
| 864.5
/ NA
| 248 | T380A (ACC→GCC) | uup | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (134/114); total (134/114) |
Only 100 of 253 total aligned reads displayed.
CTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCACCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAA > NC_000913/1010234‑1010413
|
gATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCaa < 1:4489967/93‑1 (MQ=255)
aTTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCaaa < 1:4311386/93‑1 (MQ=255)
tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa < 1:111861/93‑1 (MQ=255)
tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa > 2:4194424/1‑93 (MQ=255)
tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa < 2:3519984/93‑1 (MQ=255)
tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa > 2:3469976/1‑93 (MQ=255)
tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa > 2:1603435/1‑93 (MQ=255)
tCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGa < 1:3102172/93‑1 (MQ=255)
gAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAgg > 1:5505491/1‑92 (MQ=255)
gAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGt < 2:6099252/93‑1 (MQ=255)
gAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGCATTCACGTTGGCGCCAAACTGGAAGt > 2:1054744/1‑93 (MQ=255)
aTGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTgg > 2:843883/1‑93 (MQ=255)
aTGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCAAGTTGGCGCCAAACTGGAAGTgg > 2:5187032/1‑93 (MQ=255)
gggTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCt > 2:2676796/1‑93 (MQ=255)
ggTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCtt > 1:4987428/1‑93 (MQ=255)
ggTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCtt > 2:4533893/1‑93 (MQ=255)
gTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTa < 2:251846/93‑1 (MQ=255)
tGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTAt < 1:3952737/93‑1 (MQ=255)
cGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTAttt > 2:5044695/1‑93 (MQ=255)
ggCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTc > 1:5987663/1‑93 (MQ=255)
aaaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGAt > 1:274920/1‑93 (MQ=255)
aaaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGAt > 1:6216429/1‑93 (MQ=255)
aaaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGAt < 2:666138/93‑1 (MQ=255)
aaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATc > 2:3197728/1‑93 (MQ=255)
aaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATc > 2:6222602/1‑93 (MQ=255)
aaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATc > 2:1985197/1‑93 (MQ=255)
aaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATc < 2:1695510/93‑1 (MQ=255)
aaaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATc > 1:1928881/1‑93 (MQ=255)
aaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCa > 1:2398599/1‑93 (MQ=255)
aaCCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCa < 1:1859771/93‑1 (MQ=255)
cACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCa < 2:247792/93‑1 (MQ=255)
cACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCa < 1:2207713/93‑1 (MQ=255)
cGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACTTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAcc < 2:4646806/93‑1 (MQ=255)
cGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAcc < 2:6392043/93‑1 (MQ=255)
cGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAcc > 1:5742635/1‑93 (MQ=255)
cGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGAACAGCGGGTGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAcc < 1:873907/93‑1 (MQ=255)
gctgctAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACcg > 2:5949533/1‑93 (MQ=255)
gctgctAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACcg < 1:814956/93‑1 (MQ=255)
gctAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACcgcgc > 1:1556816/1‑93 (MQ=255)
tAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCgg > 2:4425669/1‑93 (MQ=255)
tAAAACTGATGCTCGGTCAGCGTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCgg < 1:2963533/93‑1 (MQ=255)
aaCTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAAc < 2:2249684/93‑1 (MQ=255)
aaCTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAAc > 1:5284590/1‑93 (MQ=255)
aCTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACt > 1:3581885/1‑93 (MQ=255)
aCTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACt > 2:3369390/1‑93 (MQ=255)
aCTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACt > 1:1890519/1‑93 (MQ=255)
cTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTg > 2:2954780/1‑93 (MQ=255)
cTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTg < 2:3965857/93‑1 (MQ=255)
cTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTg > 1:923132/1‑93 (MQ=255)
tGATGCTGCGTCAGCTTCAAGCGGACAGCGGTCGTATTCACGGTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTgg < 1:582445/93‑1 (MQ=255)
tGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTgg < 1:735142/93‑1 (MQ=255)
tGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTgg > 2:3350738/1‑93 (MQ=255)
aTGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTggct > 1:5776518/1‑91 (MQ=255)
aTGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGAt < 1:2319826/93‑1 (MQ=255)
gCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATcc < 1:5092919/93‑1 (MQ=255)
gCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATcc > 2:567823/1‑93 (MQ=255)
gCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATcc < 2:5797362/93‑1 (MQ=255)
cGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGa < 2:188088/93‑1 (MQ=255)
gTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATa < 2:767146/93‑1 (MQ=255)
tCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATaa > 2:3842783/1‑93 (MQ=255)
tCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATaa > 1:2235369/1‑93 (MQ=255)
tCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATaa > 2:4821247/1‑93 (MQ=255)
cAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATaaa > 2:1367517/1‑93 (MQ=255)
cAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATaaa > 1:6043001/1‑93 (MQ=255)
cTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACg < 2:3087107/93‑1 (MQ=255)
cTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACg < 2:3129347/93‑1 (MQ=255)
ttCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACgg > 1:3648061/1‑93 (MQ=255)
ttCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACgg > 2:1538227/1‑93 (MQ=255)
tCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGt > 1:2461826/1‑93 (MQ=255)
aaGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGa > 1:6041831/1‑93 (MQ=255)
aGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAt > 1:3334868/1‑93 (MQ=255)
aGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAt > 2:3045050/1‑93 (MQ=255)
aGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAt < 2:427305/93‑1 (MQ=255)
aGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAt < 1:2548812/93‑1 (MQ=255)
aGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAt > 2:4085786/1‑93 (MQ=255)
gACAGCGTGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGAt < 1:1722686/93‑1 (MQ=255)
gACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGAt < 1:664023/93‑1 (MQ=255)
gACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGAt > 1:3458988/1‑93 (MQ=255)
aCAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATa < 1:297728/93‑1 (MQ=255)
cAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATaa < 1:4883780/93‑1 (MQ=255)
aGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAATTGGATCCCGATAAAACGGTGATGGATAAc > 1:6353850/1‑93 (MQ=255)
gCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAAcc < 2:5514170/93‑1 (MQ=255)
cGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCt < 2:5869006/93‑1 (MQ=255)
cGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCACGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCt < 2:4708189/93‑1 (MQ=255)
gggCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCtt < 1:4692721/93‑1 (MQ=255)
gggCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCtt > 2:318343/1‑93 (MQ=255)
gggCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCtt < 1:3885532/93‑1 (MQ=255)
gggCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCtt < 1:5043573/93‑1 (MQ=255)
gTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCg > 1:3754517/1‑93 (MQ=255)
ttCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAg < 2:3799398/93‑1 (MQ=255)
tCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAgg < 1:1348131/93‑1 (MQ=255)
tCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAgg > 1:554959/1‑93 (MQ=255)
tCACGGTGGCGGCAAACTGGAAGTGGCTTATTTCGATCAGCCCCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAgg < 2:4972766/93‑1 (MQ=255)
cACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGt < 2:6305830/93‑1 (MQ=255)
aCGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAggca > 1:1440841/1‑91 (MQ=255)
aCGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTa > 1:5347231/1‑93 (MQ=255)
aCGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTa > 1:1047967/1‑93 (MQ=255)
cGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTaa < 2:1015889/93‑1 (MQ=255)
ttGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGc < 1:1656828/93‑1 (MQ=255)
tGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCa > 2:232724/1‑93 (MQ=255)
|
CTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCACCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAA > NC_000913/1010234‑1010413
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCCTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCACCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAAGAGG > NC_000913/1010231‑1010417
|
GCCCTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCG < SRR4302534.401305/94‑1 (MQ=60)
GCCCTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCG < SRR4302534.3464822/94‑1 (MQ=60)
CCTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCC < SRR4302534.2380742/94‑1 (MQ=60)
TGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAA > SRR4302534.3542072/1‑94 (MQ=60)
GATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAA < SRR4302534.4611463/94‑1 (MQ=60)
GATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAA > SRR4302534.563118/1‑94 (MQ=60)
GATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAA > SRR4302534.1657954/1‑94 (MQ=60)
ATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAAC < SRR4302534.4428191/94‑1 (MQ=60)
ATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAAC < SRR4302534.3488951/94‑1 (MQ=60)
ATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAAC > SRR4302534.5554183/1‑94 (MQ=60)
TGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTG < SRR4302534.5347325/94‑1 (MQ=60)
GTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGA > SRR4302534.1739491/1‑94 (MQ=60)
TCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAA < SRR4302534.3183775/94‑1 (MQ=60)
TCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAA < SRR4302534.114850/94‑1 (MQ=60)
CGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGT > SRR4302534.6433433/1‑94 (MQ=60)
CGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGT > SRR4302534.3203445/1‑94 (MQ=60)
CGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGG > SRR4302534.5653976/1‑94 (MQ=60)
GAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTG < SRR4302534.2561966/94‑1 (MQ=60)
GAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTG < SRR4302534.615263/94‑1 (MQ=60)
AATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGG < SRR4302534.2706408/94‑1 (MQ=60)
AATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGG < SRR4302534.1950767/94‑1 (MQ=60)
TGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCT > SRR4302534.443188/1‑94 (MQ=60)
TGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCT < SRR4302534.2314702/94‑1 (MQ=60)
GGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTT < SRR4302534.3579254/94‑1 (MQ=60)
GGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTT > SRR4302534.5122375/1‑94 (MQ=60)
GGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTA < SRR4302534.6645978/94‑1 (MQ=60)
TGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATT < SRR4302534.4058550/94‑1 (MQ=60)
GCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTT < SRR4302534.5444779/94‑1 (MQ=60)
CGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTC < SRR4302534.3680324/94‑1 (MQ=60)
CGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTC > SRR4302534.6150314/1‑94 (MQ=60)
CGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTC > SRR4302534.413731/1‑94 (MQ=60)
GCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGA < SRR4302534.1252856/94‑1 (MQ=60)
CAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGAT > SRR4302534.282034/1‑94 (MQ=60)
CAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGAT > SRR4302534.6385322/1‑94 (MQ=60)
AAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATC > SRR4302534.193481/1‑94 (MQ=60)
AAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATC > SRR4302534.1979315/1‑94 (MQ=60)
AAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATC > SRR4302534.3044981/1‑94 (MQ=60)
AAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGGATTCACGTTGGCGCCAAACTGGAAGTAGATTATTTCGATC > SRR4302534.4013554/1‑94 (MQ=60)
AAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCA > SRR4302534.2462332/1‑94 (MQ=60)
AAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCA > SRR4302534.4407417/1‑94 (MQ=60)
AAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCA < SRR4302534.5037767/94‑1 (MQ=60)
AACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAGGTGGCTTATTTCGATCAG < SRR4302534.381619/94‑1 (MQ=60)
AACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAG < SRR4302534.2053808/94‑1 (MQ=60)
AACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAG < SRR4302534.1908174/94‑1 (MQ=60)
CACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAC < SRR4302534.2942823/94‑1 (MQ=60)
CACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAC < SRR4302534.2266156/94‑1 (MQ=60)
CACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAC > SRR4302534.4779472/1‑94 (MQ=60)
CACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCAC > SRR4302534.2422561/1‑94 (MQ=60)
ACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACC > SRR4302534.5898320/1‑94 (MQ=60)
ACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGAACC > SRR4302534.5717942/1‑94 (MQ=60)
CGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGAACAGCGGGTGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCG < SRR4302534.896004/94‑1 (MQ=60)
GCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGC < SRR4302534.835444/94‑1 (MQ=60)
TGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGC > SRR4302534.1597572/1‑94 (MQ=60)
GCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCG < SRR4302534.1114843/94‑1 (MQ=60)
TAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGA > SRR4302534.5697198/1‑94 (MQ=60)
TAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGA > SRR4302534.228295/1‑94 (MQ=60)
TAAAACTGATGCTCGGTCAGCGTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGA < SRR4302534.3041151/94‑1 (MQ=60)
AAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAAC > SRR4302534.5427251/1‑94 (MQ=60)
AACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACT < SRR4302534.5745667/94‑1 (MQ=60)
AACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACT > SRR4302534.1939826/1‑94 (MQ=60)
AACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACT > SRR4302534.3678230/1‑94 (MQ=60)
ACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTG > SRR4302534.5107387/1‑94 (MQ=60)
ACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTG > SRR4302534.946643/1‑94 (MQ=60)
ACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTG > SRR4302534.1232749/1‑94 (MQ=60)
TGATGCTGCGTCAGCTTCAAGCGGACAGCGGTCGTATTCACGGTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGA < SRR4302534.596701/94‑1 (MQ=60)
TGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGA > SRR4302534.3005504/1‑94 (MQ=60)
TGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGA > SRR4302534.1749807/1‑94 (MQ=60)
TGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGA < SRR4302534.753318/94‑1 (MQ=60)
GATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGCT > SRR4302534.5933214/1‑94 (MQ=60)
GATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGAT < SRR4302534.657284/94‑1 (MQ=60)
ATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATC < SRR4302534.2381388/94‑1 (MQ=60)
TGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCC < SRR4302534.6210457/94‑1 (MQ=60)
GCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCC < SRR4302534.5230392/94‑1 (MQ=60)
CTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCG < SRR4302534.5199673/94‑1 (MQ=60)
CTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATACCG > SRR4302534.3725697/1‑94 (MQ=60)
GGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCAGATA > SRR4302534.913740/1‑94 (MQ=60)
GTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAA > SRR4302534.2294595/1‑94 (MQ=60)
TCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAA > SRR4302534.6207278/1‑94 (MQ=60)
AGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAAC > SRR4302534.6150854/1‑94 (MQ=60)
AGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAAC > SRR4302534.3154863/1‑94 (MQ=60)
AGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAAC > SRR4302534.5962803/1‑94 (MQ=60)
AGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAAC > SRR4302534.4919611/1‑94 (MQ=60)
AGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAAC < SRR4302534.3110158/94‑1 (MQ=60)
CTTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGG > SRR4302534.3746097/1‑94 (MQ=60)
CTTCAAGCGGACAGCGGGCGTATTCACGTTAGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGG > SRR4302534.843649/1‑94 (MQ=60)
TTCAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGT > SRR4302534.2527229/1‑94 (MQ=60)
CAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGA < SRR4302534.971741/94‑1 (MQ=60)
CAAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGA > SRR4302534.6206058/1‑94 (MQ=60)
AAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAT > SRR4302534.5303443/1‑94 (MQ=60)
AAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAT > SRR4302534.233403/1‑94 (MQ=60)
AAGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGAT > SRR4302534.3424093/1‑94 (MQ=60)
AGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATG < SRR4302534.2616394/94‑1 (MQ=60)
AGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATG < SRR4302534.2464539/94‑1 (MQ=60)
AGCGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATG < SRR4302534.4646816/94‑1 (MQ=60)
CGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGA > SRR4302534.2037048/1‑94 (MQ=60)
CGGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGA > SRR4302534.1922151/1‑94 (MQ=60)
GGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGAT > SRR4302534.3551968/1‑94 (MQ=60)
GGACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGAT > SRR4302534.3866921/1‑94 (MQ=60)
GACAGCGTGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATA < SRR4302534.1767442/94‑1 (MQ=60)
GACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATA < SRR4302534.680186/94‑1 (MQ=60)
ACAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAA < SRR4302534.305426/94‑1 (MQ=60)
CAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAATTGGATCCCGATAAAACGGTGATGGATAAC > SRR4302534.6525452/1‑94 (MQ=60)
CAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAAC > SRR4302534.2634663/1‑94 (MQ=60)
CAGCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAAC < SRR4302534.5016233/94‑1 (MQ=60)
GCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCT < SRR4302534.3965955/94‑1 (MQ=60)
GCGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCT < SRR4302534.6206465/94‑1 (MQ=60)
CGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGGTACCCATAAAACGGTGATTGATAACATT > SRR4302534.5166641/1‑94 (MQ=60)
CGGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTT < SRR4302534.517566/94‑1 (MQ=60)
GGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTG < SRR4302534.5179771/94‑1 (MQ=60)
GGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTG < SRR4302534.4820100/94‑1 (MQ=60)
GGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTG < SRR4302534.3989840/94‑1 (MQ=60)
GGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTG < SRR4302534.1892858/94‑1 (MQ=60)
GGGCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGGGATGGATAACCTTG > SRR4302534.1508870/1‑94 (MQ=60)
GCGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCC > SRR4302534.5923394/1‑94 (MQ=60)
CGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCG < SRR4302534.93483/94‑1 (MQ=60)
CGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCG > SRR4302534.3855341/1‑94 (MQ=60)
CGTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCA < SRR4302534.1579615/94‑1 (MQ=60)
GTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGA > SRR4302534.825284/1‑94 (MQ=60)
GTATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGA > SRR4302534.6035252/1‑94 (MQ=60)
TATTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGAGCAGCATCGCGCGGAAGTGGATCCCGATAAAATGGAGATGGATTGCCTTGCAGAA > SRR4302534.3138300/1‑94 (MQ=60)
TTTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAG > SRR4302534.5940225/1‑94 (MQ=60)
TTCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGG > SRR4302534.568637/1‑94 (MQ=60)
TCACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGT < SRR4302534.1383666/94‑1 (MQ=60)
CACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTA > SRR4302534.1075072/1‑94 (MQ=60)
CACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTA > SRR4302534.5491404/1‑94 (MQ=60)
CACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGCA > SRR4302534.1478761/1‑94 (MQ=60)
ACGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAA < SRR4302534.797639/94‑1 (MQ=60)
CGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAG > SRR4302534.1457141/1‑94 (MQ=60)
CGTTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAG < SRR4302534.6366589/94‑1 (MQ=60)
TTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCA < SRR4302534.1700004/94‑1 (MQ=60)
TTGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCA > SRR4302534.2472701/1‑94 (MQ=60)
TGGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAA < SRR4302534.725087/94‑1 (MQ=60)
GGCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAAG > SRR4302534.5955254/1‑94 (MQ=60)
GCGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAAGA < SRR4302534.5950701/94‑1 (MQ=60)
CGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAAGAG > SRR4302534.3146943/1‑94 (MQ=60)
CGCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAAGAG < SRR4302534.2642129/94‑1 (MQ=60)
GCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAAGAGG < SRR4302534.1039691/94‑1 (MQ=60)
GCCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAAGAGG > SRR4302534.3016975/1‑94 (MQ=60)
|
GCCCTGATTGGTCCGAATGGGTGCGGCAAAACCACGCTGCTAAAACTGATGCTCGGTCAGCTTCAAGCGGACAGCGGGCGTATTCACGTTGGCACCAAACTGGAAGTGGCTTATTTCGATCAGCACCGCGCGGAACTGGATCCCGATAAAACGGTGATGGATAACCTTGCCGAAGGTAAGCAAGAGG > NC_000913/1010231‑1010417
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
