Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,064,328 |
A→G |
N357S (AAT→AGT) |
yccE → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,064,328 | 0 | A | G | 100.0%
| 636.0
/ NA
| 179 | N357S (AAT→AGT) | yccE | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (107/72); total (107/72) |
Only 100 of 192 total aligned reads displayed.
ATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAATGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATG > NC_000913/1064238‑1064417
|
aTACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGtg > 2:872591/1‑93 (MQ=255)
aTACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGtg > 2:6360012/1‑93 (MQ=255)
aTACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGtg > 2:3932178/1‑93 (MQ=255)
tACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAgtgt > 2:1620973/1‑93 (MQ=255)
tACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAgtgt > 2:5993639/1‑93 (MQ=255)
tACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAgtgt > 1:4178694/1‑93 (MQ=255)
cGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGc > 2:3846060/1‑93 (MQ=255)
acacGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCAt > 1:1537124/1‑93 (MQ=255)
cacGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATc > 1:5668304/1‑93 (MQ=255)
cacGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATc < 1:3769841/93‑1 (MQ=255)
acGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCa < 2:6169051/93‑1 (MQ=255)
tCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAAtc < 2:6050752/93‑1 (MQ=255)
tCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAAtc > 2:2459447/1‑93 (MQ=255)
tCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAAtc < 2:3856224/93‑1 (MQ=255)
cGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAAtct < 1:5515880/93‑1 (MQ=255)
ggATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAAtctc > 1:6076095/1‑93 (MQ=255)
gATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTcc < 1:3904402/93‑1 (MQ=255)
gATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTcc > 2:6259079/1‑93 (MQ=255)
aTAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCt > 1:3584402/1‑93 (MQ=255)
aTAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCt < 1:3678183/93‑1 (MQ=255)
aTAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCt < 1:5369814/93‑1 (MQ=255)
tAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCtt < 2:1386805/93‑1 (MQ=255)
aGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTg > 2:1372019/1‑93 (MQ=255)
ggATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTgg > 2:504882/1‑93 (MQ=255)
ggATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTgg < 2:4845770/93‑1 (MQ=255)
gATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTggg < 1:4058139/93‑1 (MQ=255)
aTTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTgggg > 2:402826/1‑93 (MQ=255)
aTTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTgggg > 1:1456594/1‑93 (MQ=255)
aTTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTgggg > 1:2933207/1‑93 (MQ=255)
tAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGgaa < 1:1337058/93‑1 (MQ=255)
aaaGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGgaat > 2:4677344/1‑93 (MQ=255)
aaGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGgaatg > 2:5461280/1‑93 (MQ=255)
gCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGgaatgaa < 2:2386222/93‑1 (MQ=255)
gCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGgaatgaa > 1:2002038/1‑93 (MQ=255)
gTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATcc < 2:4150378/93‑1 (MQ=255)
gaagaaTTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCtt > 2:5279769/1‑93 (MQ=255)
aagaaTTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTTTTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCtttt > 1:5338854/1‑93 (MQ=255)
agaaTTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCtttt > 1:4623543/1‑93 (MQ=255)
agaaTTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCtttt < 2:1823008/93‑1 (MQ=255)
agaaTTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCtttt > 2:1418357/1‑93 (MQ=255)
agaaTTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCtttt < 2:6413938/93‑1 (MQ=255)
aTTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCaa < 1:2809649/93‑1 (MQ=255)
ttttCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAAc < 1:6310227/93‑1 (MQ=255)
ttttCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAAc > 1:5917893/1‑93 (MQ=255)
tttCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACa < 2:3471053/93‑1 (MQ=255)
ttCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAg > 2:2715619/1‑93 (MQ=255)
tCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGa > 1:1695085/1‑93 (MQ=255)
cTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGAt < 1:225651/93‑1 (MQ=255)
cTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGAt < 2:1089694/93‑1 (MQ=255)
cTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGAt > 2:745941/1‑93 (MQ=255)
ttgttgTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATg > 1:6029609/1‑93 (MQ=255)
tgttCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGa < 2:2015000/93‑1 (MQ=255)
ttCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATc < 2:3372405/93‑1 (MQ=255)
tCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTTGGGAATGAATACTTTTCAACAGATGAAGATCt > 2:2897308/1‑93 (MQ=255)
tCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGATTCCTTTTCGGCAGATGAAGAACt < 1:6472280/93‑1 (MQ=255)
tCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCt < 1:5600661/93‑1 (MQ=255)
cTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCtt > 1:4243248/1‑93 (MQ=255)
tttCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTg < 2:1925353/93‑1 (MQ=255)
ttCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGa > 1:1265633/1‑93 (MQ=255)
tCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAg < 2:4511387/93‑1 (MQ=255)
tCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAg < 2:3758173/93‑1 (MQ=255)
gATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTAt > 1:4492769/1‑93 (MQ=255)
aTAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATg < 1:6210510/93‑1 (MQ=255)
aTAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATg < 1:244440/93‑1 (MQ=255)
aTAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATg < 2:2896874/93‑1 (MQ=255)
aGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGt > 1:1001155/1‑93 (MQ=255)
aGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGt < 2:2948939/93‑1 (MQ=255)
cATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTa < 2:5639880/93‑1 (MQ=255)
aTTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTAt > 1:4973552/1‑93 (MQ=255)
gCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTat > 2:2112203/1‑92 (MQ=255)
gCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTaa < 1:4751374/93‑1 (MQ=255)
gCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTaa > 1:5777822/1‑93 (MQ=255)
cTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAAt > 2:5690597/1‑93 (MQ=255)
tCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATg > 2:1251472/1‑93 (MQ=255)
tCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATg > 1:1315158/1‑93 (MQ=255)
cATTATTTATTGTAAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGa > 1:6355606/1‑93 (MQ=255)
attattTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGaa > 1:2699712/1‑93 (MQ=255)
atttattGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAacac < 2:4296887/93‑1 (MQ=255)
atttattGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAacac > 1:1750962/1‑93 (MQ=255)
atttattGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAacac > 1:4241672/1‑93 (MQ=255)
atttattGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAacac > 2:3074154/1‑93 (MQ=255)
tttattGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACt > 2:4218882/1‑93 (MQ=255)
ttattGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTg < 2:3168271/93‑1 (MQ=255)
ttattGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTg > 2:2771836/1‑93 (MQ=255)
tattGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGACTCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTgg > 2:4532659/1‑93 (MQ=255)
tattGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTgg > 1:1024114/1‑93 (MQ=255)
tattGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTgg < 1:4798874/93‑1 (MQ=255)
attGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGc < 1:93562/93‑1 (MQ=255)
gTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTTTCAAt < 1:3257100/93‑1 (MQ=255)
gTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAAt < 2:893567/93‑1 (MQ=255)
ttAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATc > 2:2483662/1‑93 (MQ=255)
tAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCa > 2:5012862/1‑93 (MQ=255)
aaTAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCAt < 2:6091132/93‑1 (MQ=255)
aaTAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCAt > 1:3199058/1‑93 (MQ=255)
aTAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCAtt > 1:2107981/1‑93 (MQ=255)
aTAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTAGCAATCAtt > 1:2218076/1‑93 (MQ=255)
tagtagTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTa < 2:6252334/93‑1 (MQ=255)
agtagtGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTAt > 2:4439789/1‑93 (MQ=255)
agtagtGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGAAATCATTAt > 2:510629/1‑93 (MQ=255)
gTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATg > 1:5125685/1‑93 (MQ=255)
|
ATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAATGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATG > NC_000913/1064238‑1064417
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAATGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATGACG > NC_000913/1064235‑1064420
|
TAGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAG > SRR4302534.3851294/1‑94 (MQ=60)
TAGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAG > SRR4302534.932354/1‑94 (MQ=60)
TAGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAG > SRR4302534.2309763/1‑94 (MQ=60)
AGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGT < SRR4302534.2727364/94‑1 (MQ=60)
AGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGT < SRR4302534.5736268/94‑1 (MQ=60)
AGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGT < SRR4302534.2098241/94‑1 (MQ=60)
AGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGT > SRR4302534.862435/1‑94 (MQ=60)
ATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGT > SRR4302534.996144/1‑94 (MQ=60)
ATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGT > SRR4302534.4291600/1‑94 (MQ=60)
ACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGG < SRR4302534.4167285/94‑1 (MQ=60)
CGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCA > SRR4302534.5750436/1‑94 (MQ=60)
GACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCAT > SRR4302534.386115/1‑94 (MQ=60)
GACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCAT > SRR4302534.1577434/1‑94 (MQ=60)
ACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTTAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATC > SRR4302534.4637581/1‑94 (MQ=60)
ACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATC > SRR4302534.5821763/1‑94 (MQ=60)
ACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATC < SRR4302534.5487246/94‑1 (MQ=60)
CACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCA < SRR4302534.3871070/94‑1 (MQ=60)
CGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTC < SRR4302534.6209580/94‑1 (MQ=60)
CGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTC > SRR4302534.6241304/1‑94 (MQ=60)
CGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTC < SRR4302534.5664706/94‑1 (MQ=60)
GGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCC > SRR4302534.6412442/1‑94 (MQ=60)
GGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCC > SRR4302534.228191/1‑94 (MQ=60)
GATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCT > SRR4302534.3680818/1‑94 (MQ=60)
GATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCT < SRR4302534.4009105/94‑1 (MQ=60)
ATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTT < SRR4302534.5514520/94‑1 (MQ=60)
ATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTT < SRR4302534.3777072/94‑1 (MQ=60)
ATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTT > SRR4302534.434376/1‑94 (MQ=60)
TAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTG > SRR4302534.5261646/1‑94 (MQ=60)
GATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGG < SRR4302534.4166987/94‑1 (MQ=60)
GATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGG > SRR4302534.3010205/1‑94 (MQ=60)
GATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGG > SRR4302534.1494910/1‑94 (MQ=60)
TAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAAT < SRR4302534.1372304/94‑1 (MQ=60)
AGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAA > SRR4302534.2054448/1‑94 (MQ=60)
AGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAA > SRR4302534.780973/1‑94 (MQ=60)
GTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCT > SRR4302534.575567/1‑94 (MQ=60)
TGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTT < SRR4302534.4984250/94‑1 (MQ=60)
GAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTTTTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCTTTT > SRR4302534.5482797/1‑94 (MQ=60)
GAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTT < SRR4302534.1314951/94‑1 (MQ=60)
AAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTT > SRR4302534.4748995/1‑94 (MQ=60)
AATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTATGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAA > SRR4302534.4471847/1‑94 (MQ=60)
ATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAAC > SRR4302534.6078579/1‑94 (MQ=60)
ATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAAC < SRR4302534.2883524/94‑1 (MQ=60)
TTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACA < SRR4302534.6480828/94‑1 (MQ=60)
TTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAG > SRR4302534.5368444/1‑94 (MQ=60)
TTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAG > SRR4302534.1461540/1‑94 (MQ=60)
TTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAG > SRR4302534.2017373/1‑94 (MQ=60)
TTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAG > SRR4302534.2781183/1‑94 (MQ=60)
TTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAG > SRR4302534.3337482/1‑94 (MQ=60)
TTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGA > SRR4302534.1739143/1‑94 (MQ=60)
CTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATG < SRR4302534.231540/94‑1 (MQ=60)
CTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATG < SRR4302534.2245604/94‑1 (MQ=60)
CTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATG > SRR4302534.6193457/1‑94 (MQ=60)
TTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGA < SRR4302534.6557351/94‑1 (MQ=60)
TTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCT < SRR4302534.1741538/94‑1 (MQ=60)
TCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGATTCCTTTTCGGCAGATGAAGAACTT < SRR4302534.6646619/94‑1 (MQ=60)
TCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTT > SRR4302534.1355374/1‑94 (MQ=60)
TCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTT > SRR4302534.4357680/1‑94 (MQ=60)
TCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTT < SRR4302534.4751969/94‑1 (MQ=60)
TCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTT < SRR4302534.5752118/94‑1 (MQ=60)
TCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTT > SRR4302534.4891680/1‑94 (MQ=60)
TTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGA > SRR4302534.1298972/1‑94 (MQ=60)
CAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTA > SRR4302534.3672999/1‑94 (MQ=60)
CAGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTATCAACAGATGAAGATCTTGAGTA > SRR4302534.3114353/1‑94 (MQ=60)
TGATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTAT > SRR4302534.4614340/1‑94 (MQ=60)
GATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATG > SRR4302534.2146147/1‑94 (MQ=60)
ATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGG < SRR4302534.250839/94‑1 (MQ=60)
ATAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGG < SRR4302534.6379304/94‑1 (MQ=60)
TAGCATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGT > SRR4302534.1026816/1‑94 (MQ=60)
CATTTGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTAT > SRR4302534.5108188/1‑94 (MQ=60)
TGCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAA > SRR4302534.5934549/1‑94 (MQ=60)
GCTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAAT < SRR4302534.4880354/94‑1 (MQ=60)
CTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATG > SRR4302534.6101969/1‑94 (MQ=60)
CTCATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATG > SRR4302534.1349833/1‑94 (MQ=60)
TCATTATTTATTGTAAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGA > SRR4302534.6527248/1‑94 (MQ=60)
CATTATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAA > SRR4302534.2771031/1‑94 (MQ=60)
TATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACAC > SRR4302534.4356049/1‑94 (MQ=60)
TATTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACAC > SRR4302534.1796418/1‑94 (MQ=60)
TTTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTG > SRR4302534.1645428/1‑94 (MQ=60)
TTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGG > SRR4302534.6502556/1‑94 (MQ=60)
TTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGG > SRR4302534.1050487/1‑94 (MQ=60)
TTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGG > SRR4302534.1093806/1‑94 (MQ=60)
TTATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGG < SRR4302534.1518039/94‑1 (MQ=60)
TATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGC < SRR4302534.4929181/94‑1 (MQ=60)
ATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCA < SRR4302534.96063/94‑1 (MQ=60)
ATTGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCA > SRR4302534.3966043/1‑94 (MQ=60)
TGTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAAT < SRR4302534.4140968/94‑1 (MQ=60)
GTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTTTCAATC < SRR4302534.3343843/94‑1 (MQ=60)
GTTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATC > SRR4302534.2610394/1‑94 (MQ=60)
TTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCA > SRR4302534.6327825/1‑94 (MQ=60)
TTAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCA < SRR4302534.3702252/94‑1 (MQ=60)
TAATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCAT > SRR4302534.3283872/1‑94 (MQ=60)
AATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATT > SRR4302534.2163368/1‑94 (MQ=60)
AATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTAGCAATCATT > SRR4302534.2276816/1‑94 (MQ=60)
ATAGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTA < SRR4302534.595856/94‑1 (MQ=60)
AGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATG > SRR4302534.2975251/1‑94 (MQ=60)
AGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATG > SRR4302534.5264080/1‑94 (MQ=60)
AGTAGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATG < SRR4302534.5558216/94‑1 (MQ=60)
AGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATGACG > SRR4302534.1553480/1‑94 (MQ=60)
AGTGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATGACG > SRR4302534.1155793/1‑94 (MQ=60)
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TAGATACCGACACGTCGGATAGGATTAAAGCGGTGAAGAATTTTCTTGTTGTTCTTTCAGATAGCATTTGCTCATTATTTATTGTTAATAGTAATGTGGCATCAATCTCCTTGGGGAATGAATCCTTTTCAACAGATGAAGATCTTGAGTATGGTTATTTAATGAACACTGGCAATCATTATGACG > NC_000913/1064235‑1064420
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
