Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,065,252 |
T→C |
F149L (TTT→CTT) |
agp → |
periplasmic glucose‑1‑phosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,065,252 | 0 | T | C | 99.1%
| 792.9
/ ‑2.7
| 232 | F149L (TTT→CTT) | agp | periplasmic glucose‑1‑phosphatase |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (112/118); total (113/119) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.56e-01 |
Only 100 of 238 total aligned reads displayed.
GCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGA > NC_000913/1065162‑1065343
|
gCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCctt > 2:4461452/1‑93 (MQ=255)
cGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTa > 2:1808822/1‑93 (MQ=255)
gACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTaa > 1:4523855/1‑93 (MQ=255)
aCCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAc < 2:4946150/93‑1 (MQ=255)
aCCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAc > 1:7311939/1‑93 (MQ=255)
aCCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAc > 2:1969558/1‑93 (MQ=255)
aCCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAc < 1:4389662/93‑1 (MQ=255)
ccGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCCTCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAcc > 1:8287972/1‑93 (MQ=255)
ccGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAcc > 1:7902389/1‑93 (MQ=255)
cGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAccc < 1:5014472/93‑1 (MQ=255)
cGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAccc < 1:2767487/93‑1 (MQ=255)
gCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGCGCACTATGGACCCAACCCTTAACCCg > 1:760573/1‑93 (MQ=255)
caGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCCACCCTTAACCCGGTg > 2:1255150/1‑93 (MQ=255)
caGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTg < 1:7455901/93‑1 (MQ=255)
gTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGAt > 1:726162/1‑93 (MQ=255)
gTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGAt < 2:4606660/93‑1 (MQ=255)
ttCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATc < 2:2131154/93‑1 (MQ=255)
tCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCa > 2:803960/1‑93 (MQ=255)
cTTTATTACCGGCGCATTCCCGGGGTGTGATATTCTTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCAc < 1:6514000/93‑1 (MQ=255)
cTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCAc < 2:4680432/93‑1 (MQ=255)
tattaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCga < 2:1518877/93‑1 (MQ=255)
tattaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCga < 2:4042162/93‑1 (MQ=255)
attaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgat > 2:6865202/1‑93 (MQ=255)
attaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgat > 1:5639439/1‑93 (MQ=255)
ttaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgatg > 2:1898249/1‑93 (MQ=255)
ttaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgatg < 2:2977834/93‑1 (MQ=255)
ttaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgatg > 1:1350836/1‑93 (MQ=255)
taCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgatga < 2:8579842/93‑1 (MQ=255)
aCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgatgat < 1:969940/93‑1 (MQ=255)
aCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgatgat < 1:5615691/93‑1 (MQ=255)
cGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTc > 2:4899223/1‑93 (MQ=255)
ggCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTTATCACCGATGATTcc > 1:3547139/1‑93 (MQ=255)
ggCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTcc < 1:188964/93‑1 (MQ=255)
gcgcATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTccg > 2:809656/1‑93 (MQ=255)
gcATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTccgcc > 1:2543639/1‑93 (MQ=255)
ttCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCa > 2:5030294/1‑93 (MQ=255)
tgcccGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCa < 2:2079209/91‑1 (MQ=255)
ccGGGGTGTGATTTTCCTGTGAATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTc < 2:6713758/93‑1 (MQ=255)
ccGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTc > 2:5137760/1‑93 (MQ=255)
ccGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTc > 1:4144866/1‑93 (MQ=255)
cGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCa < 2:1723071/93‑1 (MQ=255)
cGGGGCGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCa > 1:2253145/1‑93 (MQ=255)
ggggTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAg < 1:3973977/93‑1 (MQ=255)
gggTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGt < 2:5696068/93‑1 (MQ=255)
gggTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGt < 1:5862916/93‑1 (MQ=255)
ggTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTg > 1:6018055/1‑93 (MQ=255)
tgtgATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGaa > 1:620973/1‑93 (MQ=255)
gtgATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAAc < 2:8258996/93‑1 (MQ=255)
tgATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACa < 1:6445208/93‑1 (MQ=255)
atatTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAgg > 2:5881667/1‑93 (MQ=255)
tatTCCTGTGCATCACCAGGAAAAAATGGGCACTGTGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGc > 2:5501518/1‑93 (MQ=255)
tatTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAggg > 1:3432388/1‑92 (MQ=255)
tatTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGc < 2:3989251/93‑1 (MQ=255)
ttCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCgg < 2:2488103/93‑1 (MQ=255)
ttCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATAACCGATGATTCCGCCGCATTCAGTGAACAGGCgg > 1:5339672/1‑93 (MQ=255)
tCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGt < 1:8266205/93‑1 (MQ=255)
ccTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTg < 2:3199556/93‑1 (MQ=255)
cTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTgg > 1:2429406/1‑93 (MQ=255)
tgtgCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTggc > 2:7460670/1‑93 (MQ=255)
tgCATCACCAGGAAAAAATGGGCACTATGGACCAAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTggcgg < 2:4362996/93‑1 (MQ=255)
cATCACCAGGAAAAAATGGGCGCTATGGACCCAACCCTTACCCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCa < 1:1982269/93‑1 (MQ=255)
cATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCa > 2:2669603/1‑93 (MQ=255)
aTCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCaa < 2:2160931/93‑1 (MQ=255)
tCACCATGAAAAAATGGGCACTATGGACCCAACCCTTAACCCTGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAAt < 2:1161234/93‑1 (MQ=255)
tCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAAt > 1:4211127/1‑93 (MQ=255)
tCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAAt < 1:2720867/93‑1 (MQ=255)
aCCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATgg > 2:6073482/1‑93 (MQ=255)
aCCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATgg < 2:7122785/93‑1 (MQ=255)
ccAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGga > 1:701732/1‑93 (MQ=255)
aGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGgaga < 2:7498250/93‑1 (MQ=255)
aGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGgaga > 1:2951729/1‑93 (MQ=255)
ggAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGaa < 2:8260135/93‑1 (MQ=255)
gAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGaaa > 1:2008261/1‑93 (MQ=255)
aaaaaTGGGCACTATGGACCCACCCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAaga < 2:6607283/93‑1 (MQ=255)
aaaaaTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAaga > 2:6984598/1‑93 (MQ=255)
aaaaaTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAaga < 2:8656808/93‑1 (MQ=255)
aaaaaTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAaga < 2:3940830/93‑1 (MQ=255)
aaaaTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAagag < 2:5333532/93‑1 (MQ=255)
aaaaTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAagag > 2:3623260/1‑93 (MQ=255)
aaaTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGc < 2:3731500/93‑1 (MQ=255)
tGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCa < 2:6281080/93‑1 (MQ=255)
agggCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCa < 2:6335824/92‑1 (MQ=255)
ggCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGc > 1:111634/1‑93 (MQ=255)
cACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCaa < 1:7640765/93‑1 (MQ=255)
cACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCaa < 1:171845/93‑1 (MQ=255)
cTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAAc > 1:5700390/1‑93 (MQ=255)
cTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAAc > 2:1552200/1‑93 (MQ=255)
aTGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCACTGGAGAAAGAGCTCAGCAAACTc > 2:4757715/1‑93 (MQ=255)
aTGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTc > 2:2301021/1‑93 (MQ=255)
tGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTcc > 2:8274170/1‑93 (MQ=255)
ggACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCa < 1:4719107/93‑1 (MQ=255)
gACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAg > 2:2410101/1‑93 (MQ=255)
aCCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGc > 1:2581369/1‑93 (MQ=255)
aCCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGc > 1:8478377/1‑93 (MQ=255)
ccAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCtt > 1:3354057/1‑93 (MQ=255)
ccAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCtt > 1:6791452/1‑93 (MQ=255)
cAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTa < 2:733133/93‑1 (MQ=255)
aaCCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTAc > 2:3215368/1‑93 (MQ=255)
aCCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTAcc > 2:2610478/1‑93 (MQ=255)
aCCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAACAAACTCCAGCTTAcc > 1:48479/1‑93 (MQ=255)
|
GCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGA > NC_000913/1065162‑1065343
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGAC > NC_000913/1065159‑1065344
|
GTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCC > SRR4302541.7017623/1‑94 (MQ=60)
GTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCC < SRR4302541.795803/94‑1 (MQ=60)
GTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCC < SRR4302541.7762967/94‑1 (MQ=60)
CGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAA > SRR4302541.5974731/1‑94 (MQ=60)
CGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAA > SRR4302541.4569512/1‑94 (MQ=60)
GACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAC > SRR4302541.7389986/1‑94 (MQ=60)
ACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCCTCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACC > SRR4302541.8378116/1‑94 (MQ=60)
ACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACC > SRR4302541.7989301/1‑94 (MQ=60)
ACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACC < SRR4302541.4433571/94‑1 (MQ=60)
CGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCG > SRR4302541.7334905/1‑94 (MQ=60)
CGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCG < SRR4302541.5066020/94‑1 (MQ=60)
CGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCG < SRR4302541.2795345/94‑1 (MQ=60)
CGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGCGCACTATGGACCCAACCCTTAACCCG > SRR4302541.767716/1‑94 (MQ=60)
GCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGG > SRR4302541.8126506/1‑94 (MQ=60)
CAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGA > SRR4302541.7546869/1‑94 (MQ=60)
CAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGA < SRR4302541.7535526/94‑1 (MQ=60)
AGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGAT > SRR4302541.733047/1‑94 (MQ=60)
TTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGTCACTATGGACCCAACCCTTAACCCGGTGATCA > SRR4302541.4196920/1‑94 (MQ=60)
TTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCA > SRR4302541.868762/1‑94 (MQ=60)
CTTTATTACCGGCGCATTCCCGGGGTGTGATATTCTTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACC < SRR4302541.6580469/94‑1 (MQ=60)
CTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACC > SRR4302541.2378424/1‑94 (MQ=60)
CTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACC > SRR4302541.4051072/1‑94 (MQ=60)
TTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCG < SRR4302541.6561112/94‑1 (MQ=60)
TATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGAT > SRR4302541.7503484/1‑94 (MQ=60)
TATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGAT > SRR4302541.5697090/1‑94 (MQ=60)
ATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATG > SRR4302541.1364187/1‑94 (MQ=60)
ATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATG > SRR4302541.2954047/1‑94 (MQ=60)
TACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGAT > SRR4302541.3722502/1‑94 (MQ=60)
ACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATT < SRR4302541.5727693/94‑1 (MQ=60)
ACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATT < SRR4302541.979049/94‑1 (MQ=60)
ACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATT < SRR4302541.5673165/94‑1 (MQ=60)
CCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTC > SRR4302541.5071062/1‑94 (MQ=60)
CCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTC > SRR4302541.3450434/1‑94 (MQ=60)
CGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTTATCACCGATGATTCC > SRR4302541.3582993/1‑94 (MQ=60)
CGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCC < SRR4302541.5976777/94‑1 (MQ=60)
GGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCG < SRR4302541.190390/94‑1 (MQ=60)
GGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCG < SRR4302541.5734317/94‑1 (MQ=60)
GCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGC < SRR4302541.5897631/94‑1 (MQ=60)
CGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCC > SRR4302541.2569161/1‑94 (MQ=60)
GCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCG > SRR4302541.2641347/1‑94 (MQ=60)
CCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTC > SRR4302541.4185832/1‑94 (MQ=60)
CCGGGGCGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCA > SRR4302541.2274904/1‑94 (MQ=60)
GGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGT < SRR4302541.4013413/94‑1 (MQ=60)
GGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTG < SRR4302541.5922554/94‑1 (MQ=60)
GGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTG > SRR4302541.6079735/1‑94 (MQ=60)
GTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAA > SRR4302541.626804/1‑94 (MQ=60)
GTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACA < SRR4302541.2749457/94‑1 (MQ=60)
TGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAG < SRR4302541.6510897/94‑1 (MQ=60)
ATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGG > SRR4302541.3466679/1‑94 (MQ=60)
ATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGC > SRR4302541.6548418/1‑94 (MQ=60)
ATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGC < SRR4302541.7515005/94‑1 (MQ=60)
TATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCG < SRR4302541.4551193/94‑1 (MQ=60)
TATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCG > SRR4302541.8455188/1‑94 (MQ=60)
ATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATAACCGATGATTCCGCCGCATTCAGTGAACAGGCGG > SRR4302541.5394573/1‑94 (MQ=60)
TTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGT < SRR4302541.8389823/94‑1 (MQ=60)
TTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGT < SRR4302541.6233292/94‑1 (MQ=60)
TCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTG < SRR4302541.7704446/94‑1 (MQ=60)
TCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTG < SRR4302541.8356181/94‑1 (MQ=60)
TCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTG < SRR4302541.3151193/94‑1 (MQ=60)
CCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGG > SRR4302541.2453431/1‑94 (MQ=60)
CCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGG > SRR4302541.225909/1‑94 (MQ=60)
CTGTGCATCAACAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGC < SRR4302541.4719828/94‑1 (MQ=60)
CATCACCAGGAAAAAATGGGCGCTATGGACCCAACCCTTACCCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAA < SRR4302541.2001428/94‑1 (MQ=60)
CATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAA > SRR4302541.1796415/1‑94 (MQ=60)
ATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAAT > SRR4302541.4998136/1‑94 (MQ=60)
ATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAAT > SRR4302541.4253016/1‑94 (MQ=60)
TCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATG < SRR4302541.2748028/94‑1 (MQ=60)
TCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATG < SRR4302541.6310974/94‑1 (MQ=60)
CACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCGGCATTCAGAGAACAGGCGGGGGCGGCATTGG > SRR4302541.248355/1‑94 (MQ=60)
CACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGG > SRR4302541.248354/1‑94 (MQ=60)
CACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGG > SRR4302541.6913223/1‑94 (MQ=60)
CACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGG < SRR4302541.2018934/94‑1 (MQ=60)
ACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGA > SRR4302541.4427978/1‑94 (MQ=60)
ACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGA < SRR4302541.5694519/94‑1 (MQ=60)
ACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGA > SRR4302541.708331/1‑94 (MQ=60)
CCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCGTTCAGTGAACAGGCGGTGGCGGCAATGGAG < SRR4302541.7255424/94‑1 (MQ=60)
CCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAG > SRR4302541.3984245/1‑94 (MQ=60)
CCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAG < SRR4302541.1918641/94‑1 (MQ=60)
CGGGAAAAAATGGGCACTATGGGCCCATCCCTTAAACCGGTGATCCCCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGA < SRR4302541.1417529/94‑1 (MQ=60)
CAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGA > SRR4302541.2981408/1‑94 (MQ=60)
GGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAA > SRR4302541.2027717/1‑94 (MQ=60)
AAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGA > SRR4302541.5141644/1‑94 (MQ=60)
AAAAATGTGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAG < SRR4302541.7741232/94‑1 (MQ=60)
ATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCA > SRR4302541.3411322/1‑94 (MQ=60)
GGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGC > SRR4302541.112546/1‑94 (MQ=60)
GCACTATGTACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCACTGAACAGTCGGTGGCGGCATTGGAGAAAGAGCTCAGCAA > SRR4302541.7342325/1‑94 (MQ=60)
CACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAA < SRR4302541.7722228/94‑1 (MQ=60)
CACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAA > SRR4302541.7969854/1‑94 (MQ=60)
CACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAA < SRR4302541.173128/94‑1 (MQ=60)
CACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAA < SRR4302541.3492774/94‑1 (MQ=60)
ACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAAC > SRR4302541.5758519/1‑94 (MQ=60)
ACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAAC < SRR4302541.4867592/94‑1 (MQ=60)
ACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAAC < SRR4302541.488252/94‑1 (MQ=60)
CTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGGGAAAGAGCCCAGCAAACC > SRR4302541.1795897/1‑94 (MQ=60)
TATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTC < SRR4302541.1728096/94‑1 (MQ=60)
ATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCC < SRR4302541.5528656/94‑1 (MQ=60)
TGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCA < SRR4302541.2062632/94‑1 (MQ=60)
GGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAG < SRR4302541.4767229/94‑1 (MQ=60)
GACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGC > SRR4302541.2607242/1‑94 (MQ=60)
GACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGC > SRR4302541.8569779/1‑94 (MQ=60)
ACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCT > SRR4302541.8369295/1‑94 (MQ=60)
CCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTT > SRR4302541.6864076/1‑94 (MQ=60)
CCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTT > SRR4302541.2596890/1‑94 (MQ=60)
CCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTT > SRR4302541.3387542/1‑94 (MQ=60)
CCAACCCTTAACCCGGTGGTCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGGGGCGGCAATCGAGAAAGACGTCAGCAAACTCAAGCTTA > SRR4302541.1900008/1‑94 (MQ=60)
CAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTAC < SRR4302541.2787419/94‑1 (MQ=60)
CAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTAC > SRR4302541.4286203/1‑94 (MQ=60)
AACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACC > SRR4302541.6821471/1‑94 (MQ=60)
AACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAACAAACTCCAGCTTACC > SRR4302541.48847/1‑94 (MQ=60)
CCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTCACCGA > SRR4302541.4572126/1‑94 (MQ=60)
CTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGAC < SRR4302541.12068/94‑1 (MQ=60)
CCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGAC > SRR4302541.82568/1‑94 (MQ=60)
CCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCAAC > SRR4302541.1176699/1‑94 (MQ=60)
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GTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGAC > NC_000913/1065159‑1065344
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
