Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,065,252 |
T→C |
F149L (TTT→CTT) |
agp → |
periplasmic glucose‑1‑phosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,065,252 | 0 | T | C | 100.0%
| 736.6
/ NA
| 209 | F149L (TTT→CTT) | agp | periplasmic glucose‑1‑phosphatase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/100); total (109/100) |
Only 100 of 216 total aligned reads displayed.
GCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACC > NC_000913/1065162‑1065341
|
gACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTaa < 2:3377423/93‑1 (MQ=255)
aCCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAc < 2:4291012/93‑1 (MQ=255)
cGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAccc < 2:1444586/93‑1 (MQ=255)
cGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAccc > 1:2594694/1‑93 (MQ=255)
cGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAccc > 2:3370417/1‑93 (MQ=255)
cGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAccc < 1:1796227/93‑1 (MQ=255)
cGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAccc < 1:1889701/93‑1 (MQ=255)
caGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTg > 1:253421/1‑93 (MQ=255)
caGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTg > 2:414801/1‑93 (MQ=255)
gTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGAt > 2:1646810/1‑93 (MQ=255)
gTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGAt > 1:4750664/1‑93 (MQ=255)
tCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCa < 2:5576186/93‑1 (MQ=255)
tttATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCAcc < 2:515126/93‑1 (MQ=255)
tttATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCAcc < 1:1109128/93‑1 (MQ=255)
tattaCCGGCGCATTCGCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGGCCCAACCCTTAACCCGGTGATCACCga > 1:5482870/1‑93 (MQ=255)
tattaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCga < 2:6243069/93‑1 (MQ=255)
tattaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCga > 1:2826658/1‑93 (MQ=255)
tattaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCga > 1:3754835/1‑93 (MQ=255)
attaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgat < 2:3918553/93‑1 (MQ=255)
attaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgat < 1:4684339/93‑1 (MQ=255)
ttaCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgatg < 1:1647821/93‑1 (MQ=255)
taCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgatga > 2:3937451/1‑93 (MQ=255)
taCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgatga > 1:4967555/1‑93 (MQ=255)
taCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgatga < 2:2897815/93‑1 (MQ=255)
aCCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCgatgat < 1:5653280/93‑1 (MQ=255)
ccGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGAtt < 1:208454/93‑1 (MQ=255)
ggCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTcc > 1:1453683/1‑93 (MQ=255)
gcgcATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTccg < 1:2968907/93‑1 (MQ=255)
gcgcATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTccg > 2:2300989/1‑93 (MQ=255)
gcATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTccgcc > 1:354342/1‑93 (MQ=255)
gcATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTccgcc < 1:3949316/93‑1 (MQ=255)
gcATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTccgcc < 2:4339026/93‑1 (MQ=255)
cATTCCCGGGGGGTGATATTCATGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGTTGATTgcgcgc > 1:6383048/1‑91 (MQ=255)
aTTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCcgccgc < 1:4834400/93‑1 (MQ=255)
aTTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACACGGTGATCACCGATGATTCcgccgc > 2:2234854/1‑93 (MQ=255)
ttCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAAGCCGGCGATCACCGATGATTCcgccgct > 2:3880113/1‑92 (MQ=255)
tCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCAt < 2:3091755/93‑1 (MQ=255)
ggggTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAg > 2:1870085/1‑93 (MQ=255)
ggggTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAg > 1:732866/1‑93 (MQ=255)
ggggTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAg > 1:2366272/1‑93 (MQ=255)
gggTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGt > 1:3015129/1‑93 (MQ=255)
gggTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGt > 2:4448665/1‑93 (MQ=255)
gtgtGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGa < 1:4420984/93‑1 (MQ=255)
tgtgATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTc < 2:702013/77‑1 (MQ=255)
tgtgATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGaa > 2:639220/1‑93 (MQ=255)
tgtgATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGaa > 2:1522976/1‑93 (MQ=255)
gtgATATTCCTGTGCTTCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAGCCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAAc < 1:1573161/93‑1 (MQ=255)
gATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAg > 2:4001149/1‑93 (MQ=255)
gATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAg > 1:4212897/1‑93 (MQ=255)
tatTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGc < 2:1549655/93‑1 (MQ=255)
atTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCg > 1:3889287/1‑93 (MQ=255)
ttCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCgg > 1:2450872/1‑93 (MQ=255)
tcttgtgCTTCACCAGG‑AAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGGACAGGCGGTg < 2:1016851/90‑1 (MQ=255)
tCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGt < 1:2629638/93‑1 (MQ=255)
ccTGTGCATCACCAGGAAAAAATGGGCCCTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTg < 2:1324178/93‑1 (MQ=255)
tgtgCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTggc < 1:795272/93‑1 (MQ=255)
gCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTggcggc > 1:1000504/1‑93 (MQ=255)
gCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTggcggc > 1:6451923/1‑93 (MQ=255)
cACGAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATg < 1:2242486/93‑1 (MQ=255)
cACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATg < 2:2358069/93‑1 (MQ=255)
aCCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGCGGCGGCAATgg > 1:3813630/1‑93 (MQ=255)
ccAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGga > 1:449541/1‑93 (MQ=255)
cAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGgag > 2:5272853/1‑93 (MQ=255)
cAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGgag > 2:4717931/1‑93 (MQ=255)
cAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGgag < 2:1058577/93‑1 (MQ=255)
aGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGgaga > 2:3162991/1‑93 (MQ=255)
aGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGgaga > 1:1063709/1‑93 (MQ=255)
ggAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGaa < 1:3315355/93‑1 (MQ=255)
ggAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGaa < 2:4597056/93‑1 (MQ=255)
gAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGaaa < 1:1515508/93‑1 (MQ=255)
aaaTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGc < 1:96181/93‑1 (MQ=255)
aaTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCt > 2:4803997/1‑93 (MQ=255)
aaTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCt < 1:3728527/93‑1 (MQ=255)
aaTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCt < 1:4523395/93‑1 (MQ=255)
aaTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCt < 2:404486/93‑1 (MQ=255)
aTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTc > 1:1305337/1‑93 (MQ=255)
aTGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTc < 1:408562/93‑1 (MQ=255)
tGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCa > 2:2543157/1‑93 (MQ=255)
tGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCa < 2:5740153/93‑1 (MQ=255)
tGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCa < 1:6097484/93‑1 (MQ=255)
cACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCaa > 1:173812/1‑93 (MQ=255)
aCTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCaaa < 2:864075/93‑1 (MQ=255)
cTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAAc < 2:2532038/93‑1 (MQ=255)
tATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACt < 2:901919/93‑1 (MQ=255)
tGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCTGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTcc > 2:1793909/1‑93 (MQ=255)
tGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTcc < 1:1186966/93‑1 (MQ=255)
tGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTcc > 2:5477215/1‑93 (MQ=255)
ggACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCGATGGAGAAAGAGCTCAGCAAACTCCa > 2:1170856/1‑93 (MQ=255)
ggACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCa > 1:4506269/1‑93 (MQ=255)
gACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAg < 1:3207712/93‑1 (MQ=255)
cccAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCt > 1:308995/1‑93 (MQ=255)
cccAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCt < 2:2434129/93‑1 (MQ=255)
ccAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCtt > 2:4118129/1‑93 (MQ=255)
cAACCCTTAACCCGGTGATCACCGCTGATTCCGCCGCATTCAGTGAACAGGCGTGGGCGGCAAGGGAGAAAGAGCTCAGCAAACTCCCGCTTa > 2:1773588/1‑93 (MQ=255)
cAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTa > 2:206506/1‑93 (MQ=255)
cAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTa > 2:6124974/1‑93 (MQ=255)
aaCCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTAc > 1:5411290/1‑93 (MQ=255)
aaCCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTAc > 2:121427/1‑93 (MQ=255)
aCCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTAcc > 2:5321233/1‑93 (MQ=255)
aCCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTAcc < 2:3703848/93‑1 (MQ=255)
|
GCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACC > NC_000913/1065162‑1065341
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGACA > NC_000913/1065159‑1065345
|
GTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCC > SRR4302534.3060961/1‑94 (MQ=60)
GTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCC < SRR4302534.3705513/94‑1 (MQ=60)
TTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCT < SRR4302534.5774121/94‑1 (MQ=60)
TTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCT < SRR4302534.5613726/94‑1 (MQ=60)
TGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCCACCCTT > SRR4302534.1840158/1‑94 (MQ=60)
TGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTT < SRR4302534.1819174/94‑1 (MQ=60)
TGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTT > SRR4302534.4011759/1‑94 (MQ=60)
TGCCACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGTTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATAGACCCAACCCTT < SRR4302534.1635736/94‑1 (MQ=60)
GCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTA > SRR4302534.2080231/1‑94 (MQ=60)
ACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACC > SRR4302534.163279/1‑94 (MQ=60)
CCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCC > SRR4302534.2663374/1‑94 (MQ=60)
CGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCG < SRR4302534.1938983/94‑1 (MQ=60)
CGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCG < SRR4302534.1842882/94‑1 (MQ=60)
CACACAGTTCTTTATTCCCCGCGCATTCCCGGGGTGTTATATTCCTGTGCATCACCAGGAAAAATTGGGCACTATGGACCCAACCCTTAACCCG < SRR4302534.4644579/94‑1 (MQ=60)
CACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGT > SRR4302534.2211821/1‑94 (MQ=60)
ACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTG > SRR4302534.260026/1‑94 (MQ=60)
ACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTG < SRR4302534.3145347/94‑1 (MQ=60)
CAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGA > SRR4302534.6351603/1‑94 (MQ=60)
AGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGAT < SRR4302534.254159/94‑1 (MQ=60)
AGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGAT > SRR4302534.4879627/1‑94 (MQ=60)
TTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCA > SRR4302534.3855508/1‑94 (MQ=60)
TTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCG < SRR4302534.1138051/94‑1 (MQ=60)
TTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCG > SRR4302534.3204494/1‑94 (MQ=60)
TTATTACCGGCGCATTCGCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGGCCCAACCCTTAACCCGGTGATCACCGA > SRR4302534.5630730/1‑94 (MQ=60)
TTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGA < SRR4302534.1567704/94‑1 (MQ=60)
TTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGA > SRR4302534.3855664/1‑94 (MQ=60)
TTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGA > SRR4302534.2900961/1‑94 (MQ=60)
TTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGA > SRR4302534.433446/1‑94 (MQ=60)
TATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGAT > SRR4302534.6050629/1‑94 (MQ=60)
ATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATG > SRR4302534.3040792/1‑94 (MQ=60)
ATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATG < SRR4302534.4811518/94‑1 (MQ=60)
TTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGA < SRR4302534.1690770/94‑1 (MQ=60)
TTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGA > SRR4302534.5102049/1‑94 (MQ=60)
TTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGA < SRR4302534.2216315/94‑1 (MQ=60)
TACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGAT > SRR4302534.6184949/1‑94 (MQ=60)
ACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATT < SRR4302534.5806295/94‑1 (MQ=60)
CCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTC < SRR4302534.213935/94‑1 (MQ=60)
CGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCC > SRR4302534.5087133/1‑94 (MQ=60)
CGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCC < SRR4302534.1777911/94‑1 (MQ=60)
CGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCC > SRR4302534.1491919/1‑94 (MQ=60)
GGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCG < SRR4302534.2632173/94‑1 (MQ=60)
GCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGC < SRR4302534.3046652/94‑1 (MQ=60)
CGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCC > SRR4302534.4854316/1‑94 (MQ=60)
CGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCC > SRR4302534.363409/1‑94 (MQ=60)
CGCATGCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCC < SRR4302534.2485176/94‑1 (MQ=60)
GCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCG < SRR4302534.4055044/94‑1 (MQ=60)
GCATTCCCGGGGGGTGATATTCATGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGTTGATTgcgcgc > SRR4302534.6555474/1‑88 (MQ=60)
ATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCA < SRR4302534.4965565/94‑1 (MQ=60)
TCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATT < SRR4302534.4199404/94‑1 (MQ=60)
CCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTC > SRR4302534.3073053/1‑94 (MQ=60)
CCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTC > SRR4302534.1573169/1‑94 (MQ=60)
CCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCA < SRR4302534.4621043/94‑1 (MQ=60)
TGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAG > SRR4302534.2429097/1‑94 (MQ=60)
CGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAG > SRR4302534.750985/1‑94 (MQ=60)
GGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGT > SRR4302534.3094055/1‑94 (MQ=60)
GTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCaatctatagatcgga > SRR4302534.719225/1‑79 (MQ=60)
GTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAA < SRR4302534.4540339/94‑1 (MQ=60)
GTGATATTCCTGTGCTTCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAGCCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACA < SRR4302534.1614350/94‑1 (MQ=60)
TGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAG < SRR4302534.841359/94‑1 (MQ=60)
TGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAG > SRR4302534.4326524/1‑94 (MQ=60)
TGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAG > SRR4302534.1288102/1‑94 (MQ=60)
TATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCG < SRR4302534.242282/94‑1 (MQ=60)
TATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCG > SRR4302534.3993693/1‑94 (MQ=60)
ATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGG > SRR4302534.2515993/1‑94 (MQ=60)
ATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGG > SRR4302534.2714531/1‑94 (MQ=60)
TCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTG > SRR4302534.1022461/1‑94 (MQ=60)
TCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTG < SRR4302534.2699194/94‑1 (MQ=60)
CCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTACCCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGG < SRR4302534.4755023/94‑1 (MQ=60)
TGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCG < SRR4302534.815226/94‑1 (MQ=60)
GTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGG < SRR4302534.5617512/94‑1 (MQ=60)
TGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGC > SRR4302534.1026145/1‑94 (MQ=60)
TGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGC > SRR4302534.3960187/1‑94 (MQ=60)
TGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGC > SRR4302534.6625780/1‑94 (MQ=60)
GCATCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCA > SRR4302534.4859556/1‑94 (MQ=60)
TCACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATG > SRR4302534.3881228/1‑94 (MQ=60)
CACGAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGG < SRR4302534.2301909/94‑1 (MQ=60)
CACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGG < SRR4302534.809062/94‑1 (MQ=60)
CACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGG < SRR4302534.1063692/94‑1 (MQ=60)
CACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTAGCGGCAATGG > SRR4302534.1025473/1‑94 (MQ=60)
CACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGCGGCGGCAATGG > SRR4302534.3916058/1‑94 (MQ=60)
ACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGA > SRR4302534.460928/1‑94 (MQ=60)
ACCAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGA < SRR4302534.334985/94‑1 (MQ=60)
CAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGA > SRR4302534.4582263/1‑94 (MQ=60)
CAGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGA > SRR4302534.1091280/1‑94 (MQ=60)
AGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAA > SRR4302534.495492/1‑94 (MQ=60)
AGGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAA > SRR4302534.3508605/1‑94 (MQ=60)
GGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAA > SRR4302534.526710/1‑94 (MQ=60)
GGAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAA < SRR4302534.3403951/94‑1 (MQ=60)
GAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAG > SRR4302534.1347409/1‑94 (MQ=60)
GAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAG > SRR4302534.4072711/1‑94 (MQ=60)
GAAAAAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAG < SRR4302534.1555328/94‑1 (MQ=60)
AAATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCT < SRR4302534.98751/94‑1 (MQ=60)
AATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTC < SRR4302534.4645933/94‑1 (MQ=60)
AATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTC < SRR4302534.1111801/94‑1 (MQ=60)
AATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTC > SRR4302534.1339771/1‑94 (MQ=60)
AATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTC < SRR4302534.3828724/94‑1 (MQ=60)
ATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCA < SRR4302534.419004/94‑1 (MQ=60)
ATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCA < SRR4302534.345193/94‑1 (MQ=60)
ATGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCA < SRR4302534.5676728/94‑1 (MQ=60)
TGGGCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAG < SRR4302534.6263305/94‑1 (MQ=60)
GCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAA > SRR4302534.1875261/1‑94 (MQ=60)
GCACTATGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAA > SRR4302534.178396/1‑94 (MQ=60)
TGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCA > SRR4302534.4628290/1‑94 (MQ=60)
TGGACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCA < SRR4302534.1218178/94‑1 (MQ=60)
GACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGC < SRR4302534.3292779/94‑1 (MQ=60)
ACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCT < SRR4302534.1186891/94‑1 (MQ=60)
ACCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCT > SRR4302534.316977/1‑94 (MQ=60)
CCCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTT > SRR4302534.1523660/1‑94 (MQ=60)
CCAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTA > SRR4302534.4222452/1‑94 (MQ=60)
CAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTAC > SRR4302534.3799587/1‑94 (MQ=60)
CAACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTAC > SRR4302534.5556870/1‑94 (MQ=60)
AACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACC > SRR4302534.2705423/1‑94 (MQ=60)
AACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACC > SRR4302534.2667278/1‑94 (MQ=60)
AACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACC < SRR4302534.6559824/94‑1 (MQ=60)
ACCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCG > SRR4302534.346125/1‑94 (MQ=60)
CCCTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGA < SRR4302534.5019745/94‑1 (MQ=60)
CTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGACA > SRR4302534.5894381/1‑94 (MQ=60)
|
GTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGATATTCCTGTGCATCACCAGGAAAAAATGGGCACTATGGACCCAACCTTTAACCCGGTGATCACCGATGATTCCGCCGCATTCAGTGAACAGGCGGTGGCGGCAATGGAGAAAGAGCTCAGCAAACTCCAGCTTACCGACA > NC_000913/1065159‑1065345
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
