Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,142,917 |
T→C |
D225G (GAC→GGC) |
rne ← |
RNase E |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,142,917 | 0 | T | C | 100.0%
| 681.6
/ NA
| 195 | D225G (GAC→GGC) | rne | RNase E |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (89/106); total (89/106) |
Only 100 of 201 total aligned reads displayed.
TTGCTGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGTCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCTTTT > NC_000913/1142827‑1143006
|
ttGCTGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGATCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGccc < 2:4534492/93‑1 (MQ=255)
ttGCTGCTGAAAGCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGccc < 1:3077190/93‑1 (MQ=255)
gctgctGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTg < 1:3456205/93‑1 (MQ=255)
ctgctgAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGa < 1:2015773/93‑1 (MQ=255)
tgctgAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGAc < 2:5670054/93‑1 (MQ=255)
gctgAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACg > 2:4917261/1‑93 (MQ=255)
ctgAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACgt < 1:6334769/93‑1 (MQ=255)
ctgAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACgt > 1:2249746/1‑93 (MQ=255)
ctgAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACgt < 2:5267491/93‑1 (MQ=255)
gAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGACCACTTTCGGGTTATCGATACGGATTTCGCCGCTGCCCTGACggaa > 2:333403/1‑93 (MQ=255)
aaaTCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGCTTTCGCCAATGCCCTGACgtaag > 2:4452214/1‑93 (MQ=255)
aaaTCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACgtaag < 2:2912155/93‑1 (MQ=255)
aaTCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACgtaagt > 1:1010308/1‑93 (MQ=255)
aTCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACgtaagta > 1:2532026/1‑93 (MQ=255)
ccGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAAt < 2:3688332/93‑1 (MQ=255)
ccGGGCGACCGAATTCAGCGATATGCTGACGTGCCAGTGCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAAt < 1:5092172/93‑1 (MQ=255)
cGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATc > 2:2097752/1‑93 (MQ=255)
cGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATc > 2:1191703/1‑93 (MQ=255)
cGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATc > 1:266794/1‑93 (MQ=255)
cGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATc < 1:1652298/93‑1 (MQ=255)
gggCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATcg < 1:2671979/93‑1 (MQ=255)
gggCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATcg > 2:5154467/1‑93 (MQ=255)
gggCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCAATAAGGATTTCGCCGATGCCCTGACGTAAGTAATcg > 2:5650933/1‑93 (MQ=255)
aCCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGaa > 1:1963644/1‑93 (MQ=255)
ccTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAAt < 2:5946234/93‑1 (MQ=255)
cTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATg > 1:4828709/1‑93 (MQ=255)
cTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATg < 2:4873029/93‑1 (MQ=255)
tAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATgc > 2:881998/1‑93 (MQ=255)
tAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATgc < 2:216449/93‑1 (MQ=255)
aTGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATgcgc > 2:4407189/1‑93 (MQ=255)
aTGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATgcgc > 2:5351627/1‑93 (MQ=255)
cAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGaa < 2:5077161/93‑1 (MQ=255)
cAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGaa > 1:743135/1‑93 (MQ=255)
cgCGATATGGTGAGGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAAc < 1:3236351/92‑1 (MQ=255)
aGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAAc > 1:293091/1‑93 (MQ=255)
aGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAAc < 2:1538264/93‑1 (MQ=255)
aGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAAc < 1:5829812/93‑1 (MQ=255)
gCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACg < 2:510437/93‑1 (MQ=255)
gCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACg < 1:2184268/93‑1 (MQ=255)
gATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGAt > 2:2303716/1‑93 (MQ=255)
gATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGAt > 2:1253586/1‑93 (MQ=255)
tatGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTa < 2:4296466/93‑1 (MQ=255)
tatGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTa < 2:1259993/93‑1 (MQ=255)
tGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGGACGATTACg > 1:5159612/1‑93 (MQ=255)
tGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACg < 1:3338473/93‑1 (MQ=255)
tGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACg > 1:5959636/1‑93 (MQ=255)
gCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGt < 1:4560046/93‑1 (MQ=255)
gCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGt < 2:227480/93‑1 (MQ=255)
cTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGtt < 1:2291044/93‑1 (MQ=255)
tGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTg < 1:607645/93‑1 (MQ=255)
gagttGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGc < 1:1757502/89‑1 (MQ=255)
aCGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGct > 1:5334924/1‑93 (MQ=255)
aCGTGCCAATTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGct > 1:6319260/1‑93 (MQ=255)
cGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGctc < 1:5403628/93‑1 (MQ=255)
gTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGctct < 1:2899011/93‑1 (MQ=255)
gTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGctct < 2:4617559/93‑1 (MQ=255)
gTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGctct < 2:6098279/93‑1 (MQ=255)
gTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGAATTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGcttc > 1:5646864/1‑91 (MQ=255)
tGCCAGTTCGAGCACTTTCGGTTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCtctc < 2:5592437/93‑1 (MQ=255)
gCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTcc > 2:1602259/1‑93 (MQ=255)
gCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTcc < 1:4760602/93‑1 (MQ=255)
gCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTcc > 1:271595/1‑93 (MQ=255)
ccAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCt < 1:3991997/93‑1 (MQ=255)
gTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCtgat > 1:1334598/1‑93 (MQ=255)
cGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCTAACGATTACGTTGCTCTCCTGATGaa > 2:5089133/1‑93 (MQ=255)
cGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGaa < 2:3362980/93‑1 (MQ=255)
aGCACTTTCGGGTTATCGATAAGGATTTTGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATc < 1:80273/93‑1 (MQ=255)
cTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGa > 1:1410134/1‑93 (MQ=255)
tttCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGac > 1:4160108/1‑92 (MQ=255)
tttCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGaa > 2:3925865/1‑93 (MQ=255)
tttCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGaa > 1:3811446/1‑93 (MQ=255)
tttCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGaa > 1:3523679/1‑93 (MQ=255)
ttCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAAc < 2:1527118/93‑1 (MQ=255)
cGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACgg < 2:4143547/93‑1 (MQ=255)
cGGGTTATCGATAAGGATTGCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACgg < 1:876322/93‑1 (MQ=255)
gTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGc < 2:327355/93‑1 (MQ=255)
ttATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGcc < 1:5225429/93‑1 (MQ=255)
tATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCg > 2:2666412/1‑93 (MQ=255)
tATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCg < 2:5838071/93‑1 (MQ=255)
aTCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCgg < 2:4073737/93‑1 (MQ=255)
tCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCggg < 1:1230910/93‑1 (MQ=255)
tCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCggg > 2:783090/1‑93 (MQ=255)
cGATAAGTATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGggc < 2:114161/93‑1 (MQ=255)
gATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGggcg > 2:221357/1‑93 (MQ=255)
aTAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGggcgg > 2:467566/1‑93 (MQ=255)
aTAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGggcgg > 1:1508902/1‑93 (MQ=255)
aaGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCt < 2:3112619/93‑1 (MQ=255)
agtaTTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCtt < 1:2094301/90‑1 (MQ=255)
aGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCtt < 1:5573484/93‑1 (MQ=255)
aGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCtt < 2:2591657/93‑1 (MQ=255)
ggATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCttt < 2:4974891/93‑1 (MQ=255)
ggATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCttt > 2:5477603/1‑93 (MQ=255)
ggATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCttt > 1:4127667/1‑93 (MQ=255)
aTTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCa > 2:3596775/1‑93 (MQ=255)
cGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCgg < 2:5769503/93‑1 (MQ=255)
ccGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCt > 1:5080022/1‑93 (MQ=255)
cGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCtt > 2:207387/1‑93 (MQ=255)
gATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCttt < 2:3058321/93‑1 (MQ=255)
gATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCttt < 1:2731540/93‑1 (MQ=255)
gATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCttt > 2:48936/1‑93 (MQ=255)
|
TTGCTGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGTCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCTTTT > NC_000913/1142827‑1143006
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTTTGCTGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGTCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCTTTTT > NC_000913/1142824‑1143007
|
ATTTTGCTGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGC < SRR4302534.838480/94‑1 (MQ=60)
TTTTGCTGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCC < SRR4302534.5330698/94‑1 (MQ=60)
TTGCTGCTGAAAGCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCT < SRR4302534.3158026/94‑1 (MQ=60)
GCTGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGA < SRR4302534.3549112/94‑1 (MQ=60)
GCTGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGA < SRR4302534.2255098/94‑1 (MQ=60)
CTGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGAC > SRR4302534.412092/1‑94 (MQ=60)
CTGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGAC < SRR4302534.2068534/94‑1 (MQ=60)
CTGATGAACTCCGGGCGACTTAATGCAGCGATATCCTCACGTGCCAGTTTGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGAC < SRR4302534.4497810/94‑1 (MQ=60)
TGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACG > SRR4302534.1790754/1‑94 (MQ=60)
GCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGT > SRR4302534.4891500/1‑94 (MQ=60)
GCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGT > SRR4302534.2309382/1‑94 (MQ=60)
CTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTA > SRR4302534.1399959/1‑94 (MQ=60)
CTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTA < SRR4302534.6505899/94‑1 (MQ=60)
AAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGT > SRR4302534.1036278/1‑94 (MQ=60)
AAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGT < SRR4302534.2338347/94‑1 (MQ=60)
AATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTA > SRR4302534.5608789/1‑94 (MQ=60)
AATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTA < SRR4302534.2714791/94‑1 (MQ=60)
AATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTA > SRR4302534.2599206/1‑94 (MQ=60)
CCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATC > SRR4302534.273713/1‑94 (MQ=60)
CCGGGCGACCGAATTCAGCGATATGCTGACGTGCCAGTGCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATC < SRR4302534.5229617/94‑1 (MQ=60)
CGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCG < SRR4302534.1695362/94‑1 (MQ=60)
CGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCG < SRR4302534.6508702/94‑1 (MQ=60)
CGGGCAACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGAATTTCGCCGATGCCCTGACGTAAGTAATCG < SRR4302534.4811216/94‑1 (MQ=60)
GGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGC < SRR4302534.2742593/94‑1 (MQ=60)
GGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCG > SRR4302534.2096593/1‑94 (MQ=60)
GACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAA > SRR4302534.2015043/1‑94 (MQ=60)
ACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAAT < SRR4302534.2755982/94‑1 (MQ=60)
CCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATG > SRR4302534.4959734/1‑94 (MQ=60)
GCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAA > SRR4302534.761546/1‑94 (MQ=60)
CAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAAC > SRR4302534.300671/1‑94 (MQ=60)
CGCGATATGGTGAGGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACG < SRR4302534.3322442/94‑1 (MQ=60)
AGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACG > SRR4302534.5310541/1‑94 (MQ=60)
AGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACG < SRR4302534.5988056/94‑1 (MQ=60)
GCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGA < SRR4302534.2242011/94‑1 (MQ=60)
CGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGAT < SRR4302534.1284993/94‑1 (MQ=60)
GATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATT > SRR4302534.6259694/1‑94 (MQ=60)
ATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGGACGATTACG > SRR4302534.5298735/1‑94 (MQ=60)
ATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACG < SRR4302534.6500904/94‑1 (MQ=60)
ATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACG > SRR4302534.6121448/1‑94 (MQ=60)
TGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGT < SRR4302534.3427786/94‑1 (MQ=60)
TGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGT < SRR4302534.2981003/94‑1 (MQ=60)
GCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCTGAATGCGCGAACGATTACGTT < SRR4302534.3334163/94‑1 (MQ=60)
GCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTT < SRR4302534.4683674/94‑1 (MQ=60)
CTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTG < SRR4302534.2351856/94‑1 (MQ=60)
TGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGC < SRR4302534.622432/94‑1 (MQ=60)
gagtTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCT < SRR4302534.1803123/90‑1 (MQ=60)
GACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCT > SRR4302534.5478779/1‑94 (MQ=60)
GACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCT < SRR4302534.5508789/94‑1 (MQ=60)
GACGTGCCAATTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCT > SRR4302534.6490032/1‑94 (MQ=60)
CGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCT < SRR4302534.5549058/94‑1 (MQ=60)
CGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGAATTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTtc > SRR4302534.5799719/1‑92 (MQ=60)
GTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTC < SRR4302534.2975098/94‑1 (MQ=60)
TGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCC > SRR4302534.278627/1‑94 (MQ=60)
GCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCT < SRR4302534.4889868/94‑1 (MQ=60)
CCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTG < SRR4302534.4098856/94‑1 (MQ=60)
AGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGAT > SRR4302534.1369771/1‑94 (MQ=60)
CGAGCACTTTCGGGGTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAAT > SRR4302534.3577029/1‑94 (MQ=60)
GAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATC > SRR4302534.2864353/1‑94 (MQ=60)
GGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCA > SRR4302534.2789414/1‑94 (MQ=60)
AGCACTTTCGGGTTATCGATAAGGATTTTGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCA < SRR4302534.82425/94‑1 (MQ=60)
GCACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAG < SRR4302534.5376063/94‑1 (MQ=60)
ACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGA > SRR4302534.3023178/1‑94 (MQ=60)
ACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGA > SRR4302534.2043780/1‑94 (MQ=60)
ACTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGA > SRR4302534.1447235/1‑94 (MQ=60)
CTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAC > SRR4302534.4272448/1‑94 (MQ=60)
CTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAA > SRR4302534.3913790/1‑94 (MQ=60)
CTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAA > SRR4302534.3618451/1‑94 (MQ=60)
CTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAA < SRR4302534.876813/94‑1 (MQ=60)
CTTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAA > SRR4302534.3859828/1‑94 (MQ=60)
TTTCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAAC < SRR4302534.781304/94‑1 (MQ=60)
TCGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGG > SRR4302534.1652714/1‑94 (MQ=60)
CGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGG > SRR4302534.6204712/1‑94 (MQ=60)
CGGGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGG < SRR4302534.2011471/94‑1 (MQ=60)
CGGGTTATCGATAAGGATTGCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGG < SRR4302534.898487/94‑1 (MQ=60)
GGTTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGC < SRR4302534.2382770/94‑1 (MQ=60)
TTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCG < SRR4302534.5366473/94‑1 (MQ=60)
TTATCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGCGCCG < SRR4302534.2741806/94‑1 (MQ=60)
TCGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGC < SRR4302534.1263312/94‑1 (MQ=60)
CGATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCG > SRR4302534.4045855/1‑94 (MQ=60)
CGATAAGGATTTCGCCGATGCCCTGACGTAAGGATTCGCGGAATGCGCGGACGATTACGTTGCTCTCCTGATGAATCAGAAACGGGGCCGGGCG > SRR4302534.4045856/1‑94 (MQ=60)
GATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGG > SRR4302534.5224635/1‑94 (MQ=60)
GATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGG > SRR4302534.1548580/1‑94 (MQ=60)
ATAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGC < SRR4302534.1125072/94‑1 (MQ=60)
TAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCT < SRR4302534.5746763/94‑1 (MQ=60)
TAAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCT > SRR4302534.1526527/1‑94 (MQ=60)
AAGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTT < SRR4302534.4245169/94‑1 (MQ=60)
AGTATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTT < SRR4302534.2149236/94‑1 (MQ=60)
AGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTT > SRR4302534.4238820/1‑94 (MQ=60)
AGGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTT < SRR4302534.5724008/94‑1 (MQ=60)
GGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTC > SRR4302534.3264456/1‑94 (MQ=60)
GGATTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTC < SRR4302534.2208250/94‑1 (MQ=60)
TTTCGCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGC > SRR4302534.6076337/1‑94 (MQ=60)
GCCGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCT > SRR4302534.5217147/1‑94 (MQ=60)
CGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCTTT < SRR4302534.3510204/94‑1 (MQ=60)
CGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCTTT < SRR4302534.5201222/94‑1 (MQ=60)
CGATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGATTT < SRR4302534.5235444/94‑1 (MQ=60)
GATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCTTTT < SRR4302534.2803560/94‑1 (MQ=60)
GATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCTTTT > SRR4302534.5973066/1‑94 (MQ=60)
ATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCTTTTT < SRR4302534.4477643/94‑1 (MQ=60)
ATGCCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCTTTTT > SRR4302534.4002405/1‑94 (MQ=60)
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ATTTTGCTGCTGAAATCCGGGCGACCTAATGCAGCGATATGCTGACGTGCCAGTTCGAGCACTTTCGGGTTATCGATAAGGATTTCGCCGATGTCCTGACGTAAGTAATCGCGGAATGCGCGAACGATTACGTTGCTCTCCTGATGAATCAGGAACGGGGCCGGGCGGCTTTCAGCGGCTTTTT > NC_000913/1142824‑1143007
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
