Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,156,390 |
A→G |
T131A (ACC→GCC) |
ycfH → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,156,390 | 0 | A | G | 99.5%
| 697.6
/ NA
| 201 | T131A (ACC→GCC) | ycfH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (115/85); minor base T (0/1); total (115/86) |
| Fisher's exact test for biased strand distribution p-value = 4.28e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 206 total aligned reads displayed.
TACACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATACCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGAC > NC_000913/1156300‑1156479
|
taCACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGcc < 2:2098434/93‑1 (MQ=255)
cacGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCg > 2:647398/1‑93 (MQ=255)
acGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGt > 1:697458/1‑93 (MQ=255)
acGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGt < 1:1669697/93‑1 (MQ=255)
cGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTg < 2:1283468/93‑1 (MQ=255)
gCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGa > 2:3416399/1‑93 (MQ=255)
ccGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGAc < 2:1375157/93‑1 (MQ=255)
ccGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGAc < 1:2915443/93‑1 (MQ=255)
ggAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGc < 1:5234070/93‑1 (MQ=255)
gAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGcc > 1:4499252/1‑93 (MQ=255)
aaCTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCg > 2:872825/1‑93 (MQ=255)
aaCTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCg > 2:3529608/1‑93 (MQ=255)
aCTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGt > 2:5709538/1‑93 (MQ=255)
cTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTg < 2:357018/93‑1 (MQ=255)
aaaGTACGTCAGCAAGAGTCTTTCATCCATAATTTCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGcc < 2:1772689/93‑1 (MQ=255)
aaaGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGcc > 1:2122624/1‑93 (MQ=255)
aaaGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGcc < 1:1428218/93‑1 (MQ=255)
aaaGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGcc < 1:3868814/93‑1 (MQ=255)
aaGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCg > 2:6274922/1‑93 (MQ=255)
gTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGAt > 1:5010252/1‑93 (MQ=255)
gTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGAt > 1:6115569/1‑93 (MQ=255)
gTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGAt > 1:251590/1‑93 (MQ=255)
aCGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATAc > 2:82900/1‑93 (MQ=255)
aCGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATAc > 1:127531/1‑93 (MQ=255)
aCGTCAGCAAGAGCCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATAc < 1:2307997/93‑1 (MQ=255)
gTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGc > 1:6401594/1‑93 (MQ=255)
gTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGc < 2:228340/93‑1 (MQ=255)
aGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTgg > 1:4797834/1‑93 (MQ=255)
gCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGc > 1:135173/1‑93 (MQ=255)
gCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGc > 1:3227003/1‑93 (MQ=255)
aaGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCaa > 2:3656577/1‑93 (MQ=255)
aaGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCaa < 2:1541159/93‑1 (MQ=255)
agagTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAAt > 2:5659902/1‑93 (MQ=255)
agagTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAAt > 2:3937784/1‑93 (MQ=255)
agagTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAAt > 2:2752299/1‑93 (MQ=255)
agagTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAAt > 2:5216421/1‑93 (MQ=255)
gagTCCTTCATCCATCATATCCAGATTGGTCGTGAACGGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAAtt < 2:6238403/93‑1 (MQ=255)
agTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTc < 1:3031635/93‑1 (MQ=255)
gTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCt < 1:5301516/93‑1 (MQ=255)
gTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCt > 2:2616941/1‑93 (MQ=255)
gTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCt > 1:4893298/1‑93 (MQ=255)
ccTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTgc > 1:247385/1‑93 (MQ=255)
tCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGcgcg > 1:2853810/1‑93 (MQ=255)
catccatcATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCga > 1:5132701/1‑93 (MQ=255)
catccatcATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCga > 1:228607/1‑93 (MQ=255)
atccatcATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGcgcgca > 2:5445842/1‑91 (MQ=255)
tccatcATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCgaag < 2:3924986/93‑1 (MQ=255)
ccatcATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCgaaga > 1:170147/1‑93 (MQ=255)
ccatcATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCgaaga < 1:2754829/93‑1 (MQ=255)
ccatcATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCgaaga > 1:1078910/1‑93 (MQ=255)
catcatATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCgaagaa > 1:1537203/1‑93 (MQ=255)
catcatATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCgaagaa < 1:2583249/93‑1 (MQ=255)
tcatATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGaaaa > 2:488392/1‑93 (MQ=255)
catATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGaaaaa > 2:1528066/1‑93 (MQ=255)
atatCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAg < 2:5120816/93‑1 (MQ=255)
atCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTg > 2:5848536/1‑93 (MQ=255)
atCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTg > 1:5609892/1‑93 (MQ=255)
accAGATTGGTCGTAAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGa < 1:5542529/92‑1 (MQ=255)
cAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACg < 1:3048706/93‑1 (MQ=255)
cAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACg < 1:3651528/93‑1 (MQ=255)
gATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGa > 2:2669384/1‑93 (MQ=255)
gATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGa < 2:639322/93‑1 (MQ=255)
aTTGGTCGTGAACTGACCAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGAt < 2:4038665/93‑1 (MQ=255)
aTTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGAt < 2:3995577/93‑1 (MQ=255)
aTTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGAt < 1:38869/93‑1 (MQ=255)
ggTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGc < 2:269650/93‑1 (MQ=255)
ggTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGAGACGGATTGc > 2:3115592/1‑93 (MQ=255)
gTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCg < 1:6389870/93‑1 (MQ=255)
gTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCg > 2:5598786/1‑93 (MQ=255)
tCGTGAACTGTACAAGCCGGTTATCGTCCATGCGCTTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCgg < 1:3162315/93‑1 (MQ=255)
tCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCgg < 1:1957346/93‑1 (MQ=255)
tCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCgg < 2:4108190/93‑1 (MQ=255)
cGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGt < 2:202549/93‑1 (MQ=255)
cGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGt < 2:4159419/93‑1 (MQ=255)
gTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTg > 1:3415957/1‑93 (MQ=255)
gTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTg > 1:3136185/1‑93 (MQ=255)
gTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTg < 2:1247209/93‑1 (MQ=255)
gaactgaacAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGc > 1:1225987/1‑93 (MQ=255)
aactgaacAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCg < 1:1891683/93‑1 (MQ=255)
aactgaacAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCg < 1:3334854/93‑1 (MQ=255)
aactgaacAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCg < 2:1130266/93‑1 (MQ=255)
aactgaacAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCg < 2:5682244/93‑1 (MQ=255)
actgaacAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGt < 2:682604/93‑1 (MQ=255)
tgaacAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGAGACGGATTGCGGTGGCGtac > 1:5040232/1‑93 (MQ=255)
aacAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGtacga > 1:6223577/1‑91 (MQ=255)
acAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGtactac > 2:4303549/1‑93 (MQ=255)
cAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTaca > 1:582830/1‑93 (MQ=255)
aGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACt > 1:4627839/1‑93 (MQ=255)
ccGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGt < 2:4697168/93‑1 (MQ=255)
ccGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGt < 2:1481896/93‑1 (MQ=255)
ggTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCACGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGttt < 2:4525474/93‑1 (MQ=255)
gTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGtttt < 2:1094065/93‑1 (MQ=255)
gTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGtttt > 2:940789/1‑93 (MQ=255)
tATCGTCCATTCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTAc < 2:4335249/93‑1 (MQ=255)
tATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGCTTGCGGTGGCGTCCTACACTGTTTTAc > 1:4014366/1‑93 (MQ=255)
aTCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACa > 2:5820354/1‑93 (MQ=255)
gTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACagag < 2:5244244/93‑1 (MQ=255)
tCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAgg > 2:555873/1‑93 (MQ=255)
ccATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGa > 1:5746512/1‑93 (MQ=255)
cATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGAc > 2:2858715/1‑93 (MQ=255)
|
TACACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATACCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGAC > NC_000913/1156300‑1156479
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATTACACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATACCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGACAGAG > NC_000913/1156298‑1156483
|
ATTACACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGC > SRR4302534.1194096/1‑94 (MQ=60)
TTACACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCC > SRR4302534.655152/1‑94 (MQ=60)
TTACACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCC > SRR4302534.4674831/1‑94 (MQ=60)
TTACACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCC < SRR4302534.4547742/94‑1 (MQ=60)
CACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGT > SRR4302534.714538/1‑94 (MQ=60)
ACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTG < SRR4302534.1955851/94‑1 (MQ=60)
ACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTG < SRR4302534.1713160/94‑1 (MQ=60)
gcggtAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGAC < SRR4302534.1453460/89‑1 (MQ=60)
GCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGAC < SRR4302534.5797235/94‑1 (MQ=60)
CCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACG < SRR4302534.2991963/94‑1 (MQ=60)
GGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCC < SRR4302534.5375380/94‑1 (MQ=60)
GGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCC > SRR4302534.252256/1‑94 (MQ=60)
GGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCC > SRR4302534.4621032/1‑94 (MQ=60)
GGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCC < SRR4302534.203669/94‑1 (MQ=60)
GAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCC < SRR4302534.2926061/94‑1 (MQ=60)
AAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCG > SRR4302534.536877/1‑94 (MQ=60)
TAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCC < SRR4302534.2349800/94‑1 (MQ=60)
TAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCC > SRR4302534.2178517/1‑94 (MQ=60)
AAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCG < SRR4302534.1465805/94‑1 (MQ=60)
AAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCG < SRR4302534.3972692/94‑1 (MQ=60)
AAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCG > SRR4302534.3767203/1‑94 (MQ=60)
AGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGAT > SRR4302534.258152/1‑94 (MQ=60)
AGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGAT > SRR4302534.6281936/1‑94 (MQ=60)
AGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGAT > SRR4302534.5248914/1‑94 (MQ=60)
AGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGAT > SRR4302534.5145668/1‑94 (MQ=60)
GTACGTCAGCAAGAGTCCTTGATCCATCATATCCAGATTGGTCGTGAACTGAAGACGCCGGTTATCGTGCATGCCCGTGACGCCCGTGCggaaa > SRR4302534.6601059/1‑89 (MQ=60)
GTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATA < SRR4302534.2584022/94‑1 (MQ=60)
TACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATAC > SRR4302534.130912/1‑94 (MQ=60)
ACGTCAGCAAGAGCCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACG < SRR4302534.2369259/94‑1 (MQ=60)
CGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGC > SRR4302534.2844469/1‑94 (MQ=60)
CGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGC > SRR4302534.6574436/1‑94 (MQ=60)
GTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCT > SRR4302534.1344060/1‑94 (MQ=60)
CTCAGCAAGCGCCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATCCCCGTGACGCCCGTGCCCATTCGCT < SRR4302534.2257371/94‑1 (MQ=60)
CAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGG > SRR4302534.4928105/1‑94 (MQ=60)
AGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGC > SRR4302534.3312734/1‑94 (MQ=60)
AGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGC > SRR4302534.138716/1‑94 (MQ=60)
GCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCA > SRR4302534.3423922/1‑94 (MQ=60)
AAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAAT > SRR4302534.1619322/1‑94 (MQ=60)
GAGTCTTTCATCCATCATATCCAGATTGGTCGTGAACTGACCAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTC < SRR4302534.4856235/94‑1 (MQ=60)
GAGTCCTTCACCCATCATATCGAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTC < SRR4302534.2580432/94‑1 (MQ=60)
AGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCT < SRR4302534.3111126/94‑1 (MQ=60)
AGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCT > SRR4302534.5025967/1‑94 (MQ=60)
GTCTTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTG < SRR4302534.3480282/94‑1 (MQ=60)
GTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTG > SRR4302534.1788574/1‑94 (MQ=60)
GTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTG < SRR4302534.5444569/94‑1 (MQ=60)
TCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGC > SRR4302534.253852/1‑94 (MQ=60)
TTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCG > SRR4302534.2928772/1‑94 (MQ=60)
TTCATCCATCATATCCAGATTGGTCGGGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCCCG > SRR4302534.5912122/1‑94 (MQ=60)
TCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGA > SRR4302534.234578/1‑94 (MQ=60)
TCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGA > SRR4302534.5271264/1‑94 (MQ=60)
ATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCACGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAG > SRR4302534.4078178/1‑94 (MQ=60)
TCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGA < SRR4302534.5654500/94‑1 (MQ=60)
TCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGA > SRR4302534.1106945/1‑94 (MQ=60)
TCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGA > SRR4302534.174646/1‑94 (MQ=60)
CCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAA > SRR4302534.574340/1‑94 (MQ=60)
CCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAA < SRR4302534.2827390/94‑1 (MQ=60)
CCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAA > SRR4302534.1577515/1‑94 (MQ=60)
CATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAA < SRR4302534.2651639/94‑1 (MQ=60)
CATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAA > SRR4302534.1255163/1‑94 (MQ=60)
CATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAA > SRR4302534.1296871/1‑94 (MQ=60)
ATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAA < SRR4302534.3278822/94‑1 (MQ=60)
CATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAG < SRR4302534.1500372/94‑1 (MQ=60)
TATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTG > SRR4302534.5761652/1‑94 (MQ=60)
ACCAGATTGGTCGTAAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGAC < SRR4302534.5692133/94‑1 (MQ=60)
CAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGG < SRR4302534.3128689/94‑1 (MQ=60)
CAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGG < SRR4302534.3749663/94‑1 (MQ=60)
CAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGG > SRR4302534.6029018/1‑94 (MQ=60)
AGATGGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGA < SRR4302534.5157297/94‑1 (MQ=60)
ATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATT < SRR4302534.39913/94‑1 (MQ=60)
TTGGTCGTAAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTG < SRR4302534.6354088/94‑1 (MQ=60)
GGTCGTGAGCTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCG < SRR4302534.85121/94‑1 (MQ=60)
GGTCGTAAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCG < SRR4302534.1437197/94‑1 (MQ=60)
GTCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGG < SRR4302534.6562458/94‑1 (MQ=60)
TCGTGAACTGTACAAGCCGGTTATCGTCCATGCGCTTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGT < SRR4302534.3245651/94‑1 (MQ=60)
TCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGT < SRR4302534.2008567/94‑1 (MQ=60)
TCGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGT < SRR4302534.2297674/94‑1 (MQ=60)
CGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTG < SRR4302534.3131469/94‑1 (MQ=60)
CGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTG > SRR4302534.3218661/1‑94 (MQ=60)
CGTGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTG > SRR4302534.3507731/1‑94 (MQ=60)
TGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAggggcgggatggcgggggg > SRR4302534.4957969/1‑75 (MQ=60)
TGAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGC > SRR4302534.1258268/1‑94 (MQ=60)
GAACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCG > SRR4302534.3054036/1‑94 (MQ=60)
AACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGT < SRR4302534.1941023/94‑1 (MQ=60)
AACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGT < SRR4302534.3424078/94‑1 (MQ=60)
AACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGT < SRR4302534.312463/94‑1 (MQ=60)
AACTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGT > SRR4302534.4544864/1‑94 (MQ=60)
CTGAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGAGACGGATTGCGGTGGCGTAC > SRR4302534.5176353/1‑94 (MQ=60)
GAACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACGA > SRR4302534.6392575/1‑94 (MQ=60)
ACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACA > SRR4302534.597091/1‑94 (MQ=60)
ACAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACA < SRR4302534.3707556/94‑1 (MQ=60)
CAAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAATAAGTGACGGATTGCGGTGGCGTACTACAC > SRR4302534.6523488/1‑94 (MQ=60)
AAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACT > SRR4302534.4753406/1‑94 (MQ=60)
AAGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACT > SRR4302534.5354176/1‑94 (MQ=60)
AGCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGGGTACTACACTG > SRR4302534.1744399/1‑94 (MQ=60)
GCCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGT > SRR4302534.5026721/1‑94 (MQ=60)
CCGGTTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTT > SRR4302534.269114/1‑94 (MQ=60)
TTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGCTTGCGGTGGCGTCCTACACTGTTTTAC > SRR4302534.4121931/1‑94 (MQ=60)
TTATCGTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTAC > SRR4302534.2985332/1‑94 (MQ=60)
GTCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGG > SRR4302534.3973724/1‑94 (MQ=60)
TCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGA > SRR4302534.5902320/1‑94 (MQ=60)
TCCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGA > SRR4302534.5098587/1‑94 (MQ=60)
CCATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGAC > SRR4302534.3242557/1‑94 (MQ=60)
CATGCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGACA > SRR4302534.4550176/1‑94 (MQ=60)
GCCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGACAGAG < SRR4302534.3863763/94‑1 (MQ=60)
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ATTACACGCCGGAAACTAAAGTACGTCAGCAAGAGTCCTTCATCCATCATATCCAGATTGGTCGTGAACTGAACAAGCCGGTTATCGTCCATACCCGTGACGCCCGTGCCGATACGCTGGCAATTCTGCGCGAAGAAAAAGTGACGGATTGCGGTGGCGTACTACACTGTTTTACAGAGGACAGAG > NC_000913/1156298‑1156483
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
