Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,213,846 |
A→G |
F285L (TTT→CTT) |
b1163 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,213,846 | 0 | A | G | 99.5%
| 719.7
/ ‑5.5
| 206 | F285L (TTT→CTT) | b1163 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (105/100); total (106/100) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 209 total aligned reads displayed.
ACAAACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAACCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAGA > NC_000913/1213756‑1213935
|
aaaCCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCga > 1:6439627/1‑93 (MQ=255)
aCCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCgaga < 1:3193519/93‑1 (MQ=255)
aCCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCgaga > 2:4222059/1‑93 (MQ=255)
aCCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCgaga > 2:2412283/1‑93 (MQ=255)
ccAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGat > 2:3406722/1‑93 (MQ=255)
ccAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGat > 2:6263713/1‑93 (MQ=255)
cAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGata < 2:5281386/93‑1 (MQ=255)
cAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGata < 1:3097833/93‑1 (MQ=255)
cAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGata > 2:5262209/1‑93 (MQ=255)
aGCAAAACCTGCGCCAAAATGATCATTTGCTACACTGATCCCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGatat < 1:2651684/93‑1 (MQ=255)
gCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATg < 1:4450343/93‑1 (MQ=255)
cAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGa > 1:2746051/1‑93 (MQ=255)
aaaaCCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGAc > 2:1570196/1‑93 (MQ=255)
aaCCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACtt < 2:2468565/93‑1 (MQ=255)
tGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACt < 1:2029768/93‑1 (MQ=255)
tGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACt < 2:3943719/93‑1 (MQ=255)
cgcCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACttt < 2:400430/93‑1 (MQ=255)
gcCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTc < 2:1771412/93‑1 (MQ=255)
gcCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTc < 1:3637208/93‑1 (MQ=255)
ccAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCa < 2:3097659/93‑1 (MQ=255)
cAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAg < 2:1985023/93‑1 (MQ=255)
aaaaTGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGt > 1:5437517/1‑93 (MQ=255)
aaaaTGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGt > 1:1076409/1‑93 (MQ=255)
aaaaTGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGt > 2:269758/1‑93 (MQ=255)
aaaTGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTa < 2:2382594/93‑1 (MQ=255)
aaaTGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTa < 1:5596041/93‑1 (MQ=255)
aTGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTaaa > 1:924306/1‑93 (MQ=255)
aTGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTaaa > 2:1161494/1‑93 (MQ=255)
agATCCATTGCTACCCTGAAACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAAt < 2:3746522/92‑1 (MQ=255)
gATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAAtt < 1:3721630/93‑1 (MQ=255)
aTCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTc < 2:6093520/93‑1 (MQ=255)
aaTTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAAc > 2:4483678/1‑93 (MQ=255)
aTTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACg > 2:3845210/1‑93 (MQ=255)
aTTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACg > 2:4897549/1‑93 (MQ=255)
tGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACgat < 1:1736797/93‑1 (MQ=255)
tACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACgatgat < 2:6199676/93‑1 (MQ=255)
acacTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGAtt > 2:163855/1‑93 (MQ=255)
acacTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGAtt > 2:4355723/1‑93 (MQ=255)
acacTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGAtt > 1:729003/1‑93 (MQ=255)
acacTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGAtt > 2:4657959/1‑93 (MQ=255)
acacTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGAtt > 1:5885671/1‑93 (MQ=255)
acacTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGAtt > 1:5654296/1‑93 (MQ=255)
acacTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGAtt > 2:6191594/1‑93 (MQ=255)
cacTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCATGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGAttt < 2:4534230/93‑1 (MQ=255)
cacTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGAttt > 2:2586320/1‑93 (MQ=255)
cacTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGAttt > 1:5380606/1‑93 (MQ=255)
cTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGt < 2:2833310/93‑1 (MQ=255)
tGATGCCAGCAGCCTTTAGCGATTTAATCGCGTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGtt < 1:3027655/93‑1 (MQ=255)
tGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGtt < 2:4113164/93‑1 (MQ=255)
tACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAg > 1:2407208/1‑93 (MQ=255)
tACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAg > 1:4193108/1‑93 (MQ=255)
aCCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAgg > 1:3858565/1‑93 (MQ=255)
aCCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAgg < 2:4732746/93‑1 (MQ=255)
cagcagCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCa > 1:33435/1‑93 (MQ=255)
gcagcCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCAcc > 1:2251161/1‑93 (MQ=255)
cagcCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCa < 1:3450455/93‑1 (MQ=255)
cagcCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCa > 1:4760477/1‑93 (MQ=255)
agcCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCag > 2:3179866/1‑93 (MQ=255)
gcCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCaga > 2:5980759/1‑93 (MQ=255)
gcCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCaga > 2:628546/1‑93 (MQ=255)
gcCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCaga < 1:1391497/93‑1 (MQ=255)
ccTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCagag > 2:4246563/1‑93 (MQ=255)
cTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGc < 1:5424095/93‑1 (MQ=255)
ttAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCAt > 1:4080769/1‑93 (MQ=255)
ttAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCAt > 2:1520851/1‑93 (MQ=255)
tAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCAtt > 1:298806/1‑93 (MQ=255)
tAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCAtt > 2:1011048/1‑93 (MQ=255)
tAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCAtt < 1:4831700/93‑1 (MQ=255)
aGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTg < 1:1477796/93‑1 (MQ=255)
aGCGATTTAATCGCTCCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTg < 1:3981781/93‑1 (MQ=255)
gATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGcc < 2:770359/93‑1 (MQ=255)
aaTTTAATCTCTGCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGcc < 1:1124830/92‑1 (MQ=255)
aTTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCt > 1:2350729/1‑93 (MQ=255)
tttAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCtt > 2:206411/1‑93 (MQ=255)
tAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTa > 1:5213087/1‑93 (MQ=255)
aaTCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTAt < 2:1407869/93‑1 (MQ=255)
aaTCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTAt < 2:5688181/93‑1 (MQ=255)
aaTCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTAt > 2:1222046/1‑93 (MQ=255)
accGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTAAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTAtt < 1:2929596/91‑1 (MQ=255)
aTCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTAtt < 1:3786217/93‑1 (MQ=255)
aTCGCTGCGGCAACCTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTAtt < 2:5113866/93‑1 (MQ=255)
tCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTAttt < 1:1825876/93‑1 (MQ=255)
tCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTAttt < 1:3617018/93‑1 (MQ=255)
gCTTCGGCAAACTCATCAAGCCGCGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCa > 1:5521866/1‑93 (MQ=255)
cTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCAt > 2:3593300/1‑93 (MQ=255)
cTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCAt > 1:6178019/1‑93 (MQ=255)
ttCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCAtt > 2:324106/1‑93 (MQ=255)
cGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTaa < 2:5811759/93‑1 (MQ=255)
ggCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAg < 2:3469302/93‑1 (MQ=255)
aaaCTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTaa > 2:2943598/1‑93 (MQ=255)
aaaCTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTaa > 2:636268/1‑93 (MQ=255)
aCTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGTCCTTTATTTCATTAAGTaaaa < 2:4814238/93‑1 (MQ=255)
cTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTaaaaa < 2:3750947/93‑1 (MQ=255)
cTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTaaaaa < 1:1595574/93‑1 (MQ=255)
catcaAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAag < 1:6263713/93‑1 (MQ=255)
catcaAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAag > 2:3141312/1‑93 (MQ=255)
atcaAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAaga < 2:5547459/93‑1 (MQ=255)
atcaAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAaga > 2:4366939/1‑93 (MQ=255)
atcaAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAaga < 1:3243079/93‑1 (MQ=255)
caAGCCGAGATATGACTTCGCTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAgaga < 1:1507574/93‑1 (MQ=255)
|
ACAAACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAACCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAGA > NC_000913/1213756‑1213935
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAACAAACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAACCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAGACTGC > NC_000913/1213754‑1213939
|
TAACAAACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGC > SRR4302534.3693147/1‑94 (MQ=60)
TAACAAACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGC > SRR4302534.3379821/1‑94 (MQ=60)
TAACAAACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGC > SRR4302534.3379820/1‑94 (MQ=60)
AACAAACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCC > SRR4302534.2447760/1‑94 (MQ=60)
AACAAACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCC < SRR4302534.1441024/94‑1 (MQ=60)
CAAACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGA > SRR4302534.6613178/1‑94 (MQ=60)
AAACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAG < SRR4302534.3115910/94‑1 (MQ=60)
AACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGA > SRR4302534.2515309/1‑94 (MQ=60)
ACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGAT < SRR4302534.3278133/94‑1 (MQ=60)
ACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGAT > SRR4302534.2351093/1‑94 (MQ=60)
ACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGAT < SRR4302534.789887/94‑1 (MQ=60)
ACCAGCAAAACCGGCGCTAAAATGATCAATTGCTACACGAATACCAGCAGCCTTTAGCAATTTAATCGCTTCGGCAAACTCGTCAAGCCGAGAT < SRR4302534.6103664/94‑1 (MQ=60)
CCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATA > SRR4302534.796449/1‑94 (MQ=60)
CAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATGGCTTCGGCAATCTCATCAAGCCGAGATAT > SRR4302534.4601724/1‑94 (MQ=60)
CAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATAT < SRR4302534.3179317/94‑1 (MQ=60)
AGCAAAACCTGCGCCAAAATGATCATTTGCTACACTGATCCCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATG < SRR4302534.2721814/94‑1 (MQ=60)
GCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGA < SRR4302534.4570623/94‑1 (MQ=60)
GCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGA > SRR4302534.2818379/1‑94 (MQ=60)
GCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGA < SRR4302534.2625152/94‑1 (MQ=60)
CCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCAC > SRR4302534.2823542/1‑94 (MQ=60)
TGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTT < SRR4302534.2082849/94‑1 (MQ=60)
TGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTT < SRR4302534.4187774/94‑1 (MQ=60)
GCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTT > SRR4302534.211328/1‑94 (MQ=60)
GCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCA < SRR4302534.3734966/94‑1 (MQ=60)
CAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAATTCATCAAGCCGAGATATGACTTCACTTTCAGT > SRR4302534.1593341/1‑94 (MQ=60)
CAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGT > SRR4302534.1104370/1‑94 (MQ=60)
CAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGT > SRR4302534.5583960/1‑94 (MQ=60)
AAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAA < SRR4302534.5747360/94‑1 (MQ=60)
AAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAA < SRR4302534.2812203/94‑1 (MQ=60)
AAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAA < SRR4302534.6168806/94‑1 (MQ=60)
AAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAA > SRR4302534.5551141/1‑94 (MQ=60)
AATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAA > SRR4302534.947844/1‑94 (MQ=60)
ATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAAT < SRR4302534.1762633/94‑1 (MQ=60)
GATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTC < SRR4302534.3452118/94‑1 (MQ=60)
GATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTC < SRR4302534.3821663/94‑1 (MQ=60)
GATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAACCGAGATATGACTTCACTTTTAGTAAATTC > SRR4302534.3721944/1‑94 (MQ=60)
TTGCTACACTGATACCAGCAGCCTTTAGCGATTTAACCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGAT < SRR4302534.3774274/94‑1 (MQ=60)
TGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATG < SRR4302534.1781901/94‑1 (MQ=60)
TACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATT > SRR4302534.6045476/1‑94 (MQ=60)
TACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATT > SRR4302534.5807355/1‑94 (MQ=60)
TACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATT > SRR4302534.4030318/1‑94 (MQ=60)
TACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATT > SRR4302534.747007/1‑94 (MQ=60)
ACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTT > SRR4302534.5525558/1‑94 (MQ=60)
ACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTT < SRR4302534.3290464/94‑1 (MQ=60)
ACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTT < SRR4302534.1523795/94‑1 (MQ=60)
ACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGT < SRR4302534.6431356/94‑1 (MQ=60)
CTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTACATTCAACGATGATTTGTT > SRR4302534.3030235/1‑94 (MQ=60)
CTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTT > SRR4302534.3336402/1‑94 (MQ=60)
TGATGCCAGCAGCCTTTAGCGATTTAATCGCGTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTC < SRR4302534.3107022/94‑1 (MQ=60)
CGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTC < SRR4302534.953116/94‑1 (MQ=60)
ATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAG > SRR4302534.1432203/1‑94 (MQ=60)
ATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAG > SRR4302534.2471182/1‑94 (MQ=60)
ATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAG > SRR4302534.4306384/1‑94 (MQ=60)
TACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGG > SRR4302534.3962158/1‑94 (MQ=60)
CCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCA > SRR4302534.34311/1‑94 (MQ=60)
AGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACC > SRR4302534.2310839/1‑94 (MQ=60)
GCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCA > SRR4302534.3606942/1‑94 (MQ=60)
GCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCA > SRR4302534.4889740/1‑94 (MQ=60)
CAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAG < SRR4302534.3543206/94‑1 (MQ=60)
CAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAG < SRR4302534.4410524/94‑1 (MQ=60)
AGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGA < SRR4302534.5489574/94‑1 (MQ=60)
AGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGA > SRR4302534.1124884/1‑94 (MQ=60)
GCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAG < SRR4302534.1428122/94‑1 (MQ=60)
GCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAG < SRR4302534.5842967/94‑1 (MQ=60)
CCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGC < SRR4302534.577521/94‑1 (MQ=60)
CCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGC < SRR4302534.5517289/94‑1 (MQ=60)
CTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCA < SRR4302534.5570061/94‑1 (MQ=60)
TTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCAT > SRR4302534.3941516/1‑94 (MQ=60)
TTTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCAT > SRR4302534.4190310/1‑94 (MQ=60)
TTAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATT > SRR4302534.306531/1‑94 (MQ=60)
TAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTG < SRR4302534.5696438/94‑1 (MQ=60)
TAGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTG < SRR4302534.4962783/94‑1 (MQ=60)
AGCGATTTAATCTCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGG < SRR4302534.3073948/94‑1 (MQ=60)
AGCGATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGG < SRR4302534.1516658/94‑1 (MQ=60)
AGCGATTTAATCGCTCCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGG < SRR4302534.4088330/94‑1 (MQ=60)
GATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCT < SRR4302534.1893674/94‑1 (MQ=60)
GATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCT > SRR4302534.2413117/1‑94 (MQ=60)
AATTTAATCTCTGCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCT < SRR4302534.1154232/94‑1 (MQ=60)
ATTTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTCGCCTT > SRR4302534.326687/1‑94 (MQ=60)
TTAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTA > SRR4302534.5353774/1‑94 (MQ=60)
TAATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTAT > SRR4302534.5622480/1‑94 (MQ=60)
ATCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTT < SRR4302534.3887868/94‑1 (MQ=60)
ACCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTAAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTT < SRR4302534.3006516/94‑1 (MQ=60)
TCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTC < SRR4302534.1873367/94‑1 (MQ=60)
TCGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTC < SRR4302534.3714265/94‑1 (MQ=60)
CGCTTCGGCAAACTCATCAAGCCGCGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCA > SRR4302534.5670863/1‑94 (MQ=60)
CGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCA > SRR4302534.4932862/1‑94 (MQ=60)
CGCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCA < SRR4302534.1367473/94‑1 (MQ=60)
GCTTCGGCAAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCAT > SRR4302534.6346140/1‑94 (MQ=60)
AAACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAA > SRR4302534.3731996/1‑94 (MQ=60)
AACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAA > SRR4302534.647238/1‑94 (MQ=60)
AACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAA < SRR4302534.3874298/94‑1 (MQ=60)
ACTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAA > SRR4302534.5239341/1‑94 (MQ=60)
CTCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAA < SRR4302534.1637269/94‑1 (MQ=60)
TCATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAG < SRR4302534.5577364/94‑1 (MQ=60)
CATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGA < SRR4302534.6433372/94‑1 (MQ=60)
CATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGA > SRR4302534.674021/1‑94 (MQ=60)
ATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAG < SRR4302534.3329383/94‑1 (MQ=60)
ATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAG > SRR4302534.1808879/1‑94 (MQ=60)
ATCAAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAG < SRR4302534.4292523/94‑1 (MQ=60)
CAAGCCGAGATATGACTTCGCTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAGAC < SRR4302534.1547228/94‑1 (MQ=60)
AAGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAGACT < SRR4302534.3687719/94‑1 (MQ=60)
AGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAGACTG < SRR4302534.2278990/94‑1 (MQ=60)
AGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAGACTG > SRR4302534.4754213/1‑94 (MQ=60)
AGCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAGACTG > SRR4302534.1610803/1‑94 (MQ=60)
GCCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAGACTGC < SRR4302534.2007815/94‑1 (MQ=60)
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TAACAAACCAGCAAAACCTGCGCCAAAATGATCAATTGCTACACTGATACCAGCAGCCTTTAGCGATTTAATCGCTTCGGCAAACTCATCAAACCGAGATATGACTTCACTTTCAGTAAATTCAACGATGATTTGTTCAGGCACCAGAGCATTGGCCTTTATTTCATTAAGTAAAAAAGAGACTGC > NC_000913/1213754‑1213939
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
