Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,358,270 |
G→A |
G221G (GGC→GGT) |
b1297 ← |
putative glutamine synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,358,270 | 0 | G | A | 99.1%
| 1219.1
/ ‑4.9
| 323 | G221G (GGC→GGT) | b1297 | putative glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base G (0/3); new base A (155/165); total (155/168) |
| Fisher's exact test for biased strand distribution p-value = 2.49e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 330 total aligned reads displayed.
TAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAAC > NC_000913/1358180‑1358359
|
gTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGGCTCAGCGACCGCACCAt > 2:5599282/1‑93 (MQ=255)
gTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAt > 1:6334082/1‑93 (MQ=255)
gTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAt > 2:3126227/1‑93 (MQ=255)
gTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAt > 1:2343572/1‑93 (MQ=255)
gTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAt > 1:5064349/1‑93 (MQ=255)
gTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAt > 1:2277032/1‑93 (MQ=255)
tGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGTGACCGCACCATc < 2:3466110/93‑1 (MQ=255)
tGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATc < 1:2823458/93‑1 (MQ=255)
tGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATc < 1:2566743/93‑1 (MQ=255)
tGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATc < 2:214535/93‑1 (MQ=255)
gCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCt < 2:4189221/93‑1 (MQ=255)
gcgcATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCg < 1:3037061/93‑1 (MQ=255)
catcatCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGaa < 2:2421015/93‑1 (MQ=255)
catcatCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGaa > 1:4905919/1‑93 (MQ=255)
catcatCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGaa < 2:2161158/93‑1 (MQ=255)
catcatCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGaa > 2:4729817/1‑93 (MQ=255)
tcatcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGGCCGCACCATCTGCCGGAATc < 1:2770876/93‑1 (MQ=255)
tcatcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATc < 1:771648/93‑1 (MQ=255)
tcatcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATc > 2:6467901/1‑93 (MQ=255)
tcatcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATc > 1:108634/1‑93 (MQ=255)
atcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAg < 2:1666714/93‑1 (MQ=255)
atcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAg > 1:355596/1‑93 (MQ=255)
atcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAg > 2:6280582/1‑93 (MQ=255)
tcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGc < 1:1991100/93‑1 (MQ=255)
cGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCt < 2:5816247/93‑1 (MQ=255)
cGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCt < 2:1588477/93‑1 (MQ=255)
cGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCt < 1:3718901/93‑1 (MQ=255)
aGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTa < 2:5533407/93‑1 (MQ=255)
ggCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTaa > 2:4672168/1‑93 (MQ=255)
gCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAAc < 1:3619970/93‑1 (MQ=255)
gCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAAc < 1:5183338/93‑1 (MQ=255)
gCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAAc < 2:2373962/93‑1 (MQ=255)
cTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACt < 2:3060372/93‑1 (MQ=255)
cTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACt < 2:2461431/93‑1 (MQ=255)
ccAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTgcg > 1:131409/1‑93 (MQ=255)
ccAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTgcg > 2:5467302/1‑93 (MQ=255)
cAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTgcgc < 2:5325653/93‑1 (MQ=255)
cAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTgcgc > 1:6168587/1‑93 (MQ=255)
aGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGcc > 1:965856/1‑93 (MQ=255)
cACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAg > 1:1243791/1‑93 (MQ=255)
cGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGtt < 2:3656308/93‑1 (MQ=255)
gTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc > 1:5884717/1‑93 (MQ=255)
gTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc < 2:3401525/93‑1 (MQ=255)
aTCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtcatc < 2:567087/93‑1 (MQ=255)
aGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAat > 2:2610554/1‑93 (MQ=255)
aGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAat > 2:2039471/1‑93 (MQ=255)
aGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAat > 2:1362264/1‑93 (MQ=255)
gTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAata < 1:561642/93‑1 (MQ=255)
tATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAatat < 1:2595011/93‑1 (MQ=255)
ggTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCAt < 2:2810123/93‑1 (MQ=255)
ggTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCAt < 2:908981/93‑1 (MQ=255)
aaGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAg < 1:1852481/93‑1 (MQ=255)
aaGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAg < 1:1773775/93‑1 (MQ=255)
aGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGc > 2:2547147/1‑93 (MQ=255)
ggTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCa < 1:6021218/93‑1 (MQ=255)
ggTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCa > 1:5399978/1‑93 (MQ=255)
gTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCAc < 2:405436/93‑1 (MQ=255)
gTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCCGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCAc > 2:4947621/1‑93 (MQ=255)
ttGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCaag < 2:1516372/93‑3 (MQ=255)
tGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGt < 2:4585542/93‑1 (MQ=255)
tGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGt > 2:3240246/1‑93 (MQ=255)
aTTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCg > 1:3962820/1‑93 (MQ=255)
tttCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCgg > 1:1412956/1‑93 (MQ=255)
cAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGa < 2:4105748/93‑1 (MQ=255)
cAAACTGACCCGGCCAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGcca > 1:3345279/1‑91 (MQ=255)
aaaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGaa < 1:3440795/93‑1 (MQ=255)
aaaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGaa > 1:1134365/1‑93 (MQ=255)
aaaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGaa > 1:6371144/1‑93 (MQ=255)
aaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAg > 1:4064421/1‑93 (MQ=255)
aaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAg < 2:2702163/93‑1 (MQ=255)
cTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTg < 2:780847/93‑1 (MQ=255)
cTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTg < 1:2155613/93‑1 (MQ=255)
gACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGt < 2:1839155/93‑1 (MQ=255)
gACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGACAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGt < 1:4997323/93‑1 (MQ=255)
gcccGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGtt < 2:5675429/92‑1 (MQ=255)
cGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAg < 2:2888662/93‑1 (MQ=255)
cGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAg > 1:6474105/1‑93 (MQ=255)
ggCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAgg > 1:2673879/1‑93 (MQ=255)
gCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGt < 2:6139858/93‑1 (MQ=255)
gAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTa < 2:6012492/93‑1 (MQ=255)
gAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTa > 2:6255630/1‑93 (MQ=255)
gAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTa > 2:3807020/1‑93 (MQ=255)
aGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAt > 2:4438159/1‑93 (MQ=255)
aGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAt > 1:4553411/1‑93 (MQ=255)
aGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAt > 2:1190115/1‑93 (MQ=255)
ggCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATc > 1:2902002/1‑93 (MQ=255)
ggCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGGTATc > 1:5759929/1‑93 (MQ=255)
gCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCa < 2:5190447/93‑1 (MQ=255)
gCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCa > 1:533172/1‑93 (MQ=255)
tCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACg < 1:3195483/93‑1 (MQ=255)
cAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACgg < 2:3940264/93‑1 (MQ=255)
cAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACgg > 2:185242/1‑93 (MQ=255)
gCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAg < 1:1667655/93‑1 (MQ=255)
gCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAg > 2:2438641/1‑93 (MQ=255)
ggACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGt < 1:1048176/92‑1 (MQ=255)
cGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGt < 1:2416314/93‑1 (MQ=255)
cGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGt < 1:4722345/93‑1 (MQ=255)
aCCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTaa > 1:879202/1‑93 (MQ=255)
ccGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTaaa > 1:4178194/1‑93 (MQ=255)
cgcaCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAAc < 1:2551017/93‑1 (MQ=255)
|
TAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAAC > NC_000913/1358180‑1358359
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCTGG > NC_000913/1358178‑1358363
|
TTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCAC < SRR4302534.2659234/94‑1 (MQ=60)
TTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACC > SRR4302534.539551/1‑94 (MQ=60)
TAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCA > SRR4302534.940317/1‑94 (MQ=60)
AGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAT > SRR4302534.2405769/1‑94 (MQ=60)
AGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAT > SRR4302534.2969882/1‑94 (MQ=60)
AGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAT > SRR4302534.6505196/1‑94 (MQ=60)
AGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAT > SRR4302534.2337454/1‑94 (MQ=60)
AGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAT > SRR4302534.3518024/1‑94 (MQ=60)
AGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAT > SRR4302534.5201091/1‑94 (MQ=60)
TGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGTCCTCAGCGACCGCACCATCT < SRR4302534.6491017/94‑1 (MQ=60)
TGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCT < SRR4302534.2634750/94‑1 (MQ=60)
TGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCT < SRR4302534.2897687/94‑1 (MQ=60)
TGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCT < SRR4302534.5070353/94‑1 (MQ=60)
TGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCT < SRR4302534.6033288/94‑1 (MQ=60)
TGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCT > SRR4302534.5880906/1‑94 (MQ=60)
GCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTG < SRR4302534.3652179/94‑1 (MQ=60)
CAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCC < SRR4302534.5415820/94‑1 (MQ=60)
CAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCC > SRR4302534.2889535/1‑94 (MQ=60)
CAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCC > SRR4302534.333467/1‑94 (MQ=60)
GCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGG > SRR4302534.881832/1‑94 (MQ=60)
GCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGG < SRR4302534.3116696/94‑1 (MQ=60)
GCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGG < SRR4302534.2606317/94‑1 (MQ=60)
GCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAA > SRR4302534.784159/1‑94 (MQ=60)
GCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAA > SRR4302534.5105388/1‑94 (MQ=60)
GCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAA > SRR4302534.5038906/1‑94 (MQ=60)
CATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAAT > SRR4302534.5189997/1‑94 (MQ=60)
ATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATC < SRR4302534.5931636/94‑1 (MQ=60)
ATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATC > SRR4302534.111537/1‑94 (MQ=60)
ATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATC > SRR4302534.5212886/1‑94 (MQ=60)
ATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATC < SRR4302534.5708418/94‑1 (MQ=60)
TCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGGCCGCACCATCTGCCGGAATCA < SRR4302534.2843795/94‑1 (MQ=60)
TCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCA < SRR4302534.2956233/94‑1 (MQ=60)
TCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCA < SRR4302534.790856/94‑1 (MQ=60)
CATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAG > SRR4302534.364687/1‑94 (MQ=60)
CATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAG < SRR4302534.518430/94‑1 (MQ=60)
TCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCT < SRR4302534.2043237/94‑1 (MQ=60)
TCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCT < SRR4302534.2669078/94‑1 (MQ=60)
CGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTG < SRR4302534.3818876/94‑1 (MQ=60)
CGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTG > SRR4302534.4059236/1‑94 (MQ=60)
CAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTA > SRR4302534.3164724/1‑94 (MQ=60)
GCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACT < SRR4302534.5323035/94‑1 (MQ=60)
GCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACT < SRR4302534.164345/94‑1 (MQ=60)
GCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACT < SRR4302534.3717289/94‑1 (MQ=60)
CTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTG < SRR4302534.3037290/94‑1 (MQ=60)
CTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTG > SRR4302534.2725378/1‑94 (MQ=60)
CTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGACTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTG > SRR4302534.2203587/1‑94 (MQ=60)
TCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCG > SRR4302534.134880/1‑94 (MQ=60)
CCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGC > SRR4302534.6336362/1‑94 (MQ=60)
CAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCC > SRR4302534.990472/1‑94 (MQ=60)
CAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCC < SRR4302534.1348561/94‑1 (MQ=60)
AGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCA < SRR4302534.6204465/94‑1 (MQ=60)
AGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCA < SRR4302534.4254551/94‑1 (MQ=60)
AGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCA < SRR4302534.1748813/94‑1 (MQ=60)
AGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCA > SRR4302534.2502060/1‑94 (MQ=60)
GCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAG > SRR4302534.3788305/1‑94 (MQ=60)
GCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAG > SRR4302534.1276576/1‑94 (MQ=60)
GCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAG > SRR4302534.5038416/1‑94 (MQ=60)
GCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAG > SRR4302534.3249061/1‑94 (MQ=60)
CACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGT < SRR4302534.3471852/94‑1 (MQ=60)
CACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGT > SRR4302534.4811336/1‑94 (MQ=60)
CACGTTATCAGTATGGTAAAGGGTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGT > SRR4302534.5537369/1‑94 (MQ=60)
CAAGTTATCATTATGGTAAAGGTTGATTTCAAACTGACTCGGCGAGGCCTCAGCGTCCGCGCCATCTGCCGGAATCAGCTGTAACTGCGACAGT < SRR4302534.3307502/94‑1 (MQ=60)
CGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTC > SRR4302534.6044495/1‑94 (MQ=60)
GTTATCAGTATGGTAAAGGTTGATTGCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCA > SRR4302534.6396860/1‑94 (MQ=60)
TTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGGCAGCTCAT > SRR4302534.6068876/1‑94 (MQ=60)
TTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCAT > SRR4302534.3398721/1‑94 (MQ=60)
TTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCAT > SRR4302534.2722278/1‑94 (MQ=60)
TTATCAGTATGGAAAAGGTTGATTTTAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCAT > SRR4302534.4087207/1‑94 (MQ=60)
TATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATC > SRR4302534.1696000/1‑94 (MQ=60)
TATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATC < SRR4302534.6525606/94‑1 (MQ=60)
ATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCA > SRR4302534.3995986/1‑94 (MQ=60)
TCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAA > SRR4302534.1189216/1‑94 (MQ=60)
TCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAA > SRR4302534.2767491/1‑94 (MQ=60)
AGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATA > SRR4302534.837429/1‑94 (MQ=60)
AGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATA < SRR4302534.2622664/94‑1 (MQ=60)
GTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATAT < SRR4302534.575462/94‑1 (MQ=60)
TATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATC < SRR4302534.2663700/94‑1 (MQ=60)
TGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCAT < SRR4302534.6300779/94‑1 (MQ=60)
GTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTG < SRR4302534.2238927/94‑1 (MQ=60)
GTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTG < SRR4302534.6571545/94‑1 (MQ=60)
GTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTG < SRR4302534.2643272/94‑1 (MQ=60)
TAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGA < SRR4302534.2465411/94‑1 (MQ=60)
TAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGA > SRR4302534.1152655/1‑94 (MQ=60)
AAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAG > SRR4302534.4122785/1‑94 (MQ=60)
AAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGC > SRR4302534.4205969/1‑94 (MQ=60)
AAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGC < SRR4302534.1819810/94‑1 (MQ=60)
AAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGC < SRR4302534.1900676/94‑1 (MQ=60)
AGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCA > SRR4302534.5545342/1‑94 (MQ=60)
GGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCAC < SRR4302534.6184857/94‑1 (MQ=60)
GGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCAC > SRR4302534.566838/1‑94 (MQ=60)
GGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCAC > SRR4302534.2208976/1‑94 (MQ=60)
GTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACG < SRR4302534.4736080/94‑1 (MQ=60)
GTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACG < SRR4302534.1114094/94‑1 (MQ=60)
TTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGT < SRR4302534.1199387/94‑1 (MQ=60)
GATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCG > SRR4302534.6339261/1‑94 (MQ=60)
GATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCG < SRR4302534.1319795/94‑1 (MQ=60)
GATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCG > SRR4302534.4068916/1‑94 (MQ=60)
GATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCG < SRR4302534.1943895/94‑1 (MQ=60)
ATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGG > SRR4302534.1450126/1‑94 (MQ=60)
TCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGA > SRR4302534.3582423/1‑94 (MQ=60)
TCAAACTGACCCGGCCAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCCA > SRR4302534.3434829/1‑94 (MQ=60)
CAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAA > SRR4302534.2366062/1‑94 (MQ=60)
CAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAA > SRR4302534.6543160/1‑94 (MQ=60)
CAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAA > SRR4302534.424419/1‑94 (MQ=60)
CAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAA > SRR4302534.1164018/1‑94 (MQ=60)
AAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAG > SRR4302534.5482804/1‑94 (MQ=60)
AAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAG > SRR4302534.4423906/1‑94 (MQ=60)
AAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAG > SRR4302534.4173463/1‑94 (MQ=60)
AAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAG > SRR4302534.37544/1‑94 (MQ=60)
AAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAG < SRR4302534.3533274/94‑1 (MQ=60)
AACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGT < SRR4302534.3638571/94‑1 (MQ=60)
AACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGT < SRR4302534.1732005/94‑1 (MQ=60)
AACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGT > SRR4302534.775266/1‑94 (MQ=60)
AACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGG > SRR4302534.96228/1‑94 (MQ=60)
ACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTG > SRR4302534.6535622/1‑94 (MQ=60)
CTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGG < SRR4302534.2212512/94‑1 (MQ=60)
TGAACCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGT > SRR4302534.3024096/1‑94 (MQ=60)
GACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTT < SRR4302534.5809906/94‑1 (MQ=60)
GACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTT < SRR4302534.584369/94‑1 (MQ=60)
GACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGACAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTT < SRR4302534.5132460/94‑1 (MQ=60)
ACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTG < SRR4302534.783108/94‑1 (MQ=60)
ACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTG < SRR4302534.5208007/94‑1 (MQ=60)
CCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAG < SRR4302534.2438025/94‑1 (MQ=60)
CCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAG > SRR4302534.6648509/1‑94 (MQ=60)
CCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAG < SRR4302534.1908293/94‑1 (MQ=60)
CGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGG > SRR4302534.2744551/1‑94 (MQ=60)
CGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGG < SRR4302534.6087022/94‑1 (MQ=60)
GGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGT < SRR4302534.28772/94‑1 (MQ=60)
GGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGT > SRR4302534.3746686/1‑94 (MQ=60)
GCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTT < SRR4302534.2321361/94‑1 (MQ=60)
CGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTA < SRR4302534.2975760/94‑1 (MQ=60)
GAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAT > SRR4302534.2620224/1‑94 (MQ=60)
GAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAT < SRR4302534.3666324/94‑1 (MQ=60)
GAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAT > SRR4302534.2067606/1‑94 (MQ=60)
GAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAT > SRR4302534.4676845/1‑94 (MQ=60)
AGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATC > SRR4302534.1853382/1‑94 (MQ=60)
AGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATC < SRR4302534.2377305/94‑1 (MQ=60)
AGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATC > SRR4302534.2978158/1‑94 (MQ=60)
AGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGGTATC > SRR4302534.5916168/1‑94 (MQ=60)
GGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCA > SRR4302534.546412/1‑94 (MQ=60)
GGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCA < SRR4302534.2650046/94‑1 (MQ=60)
CCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAAC < SRR4302534.137832/94‑1 (MQ=60)
CCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAAC < SRR4302534.4995419/94‑1 (MQ=60)
TCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGG < SRR4302534.3280195/94‑1 (MQ=60)
TCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGG < SRR4302534.4593011/94‑1 (MQ=60)
CAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCTCCAGTTCATCAATATCATTGAGCACGTGGGTGGAGGGGTTTAGGTTATCAACGAA > SRR4302534.2821600/1‑94 (MQ=60)
CAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGA > SRR4302534.1842145/1‑94 (MQ=60)
CAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGA < SRR4302534.3440845/94‑1 (MQ=60)
CAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGA < SRR4302534.1450049/94‑1 (MQ=60)
CAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGA < SRR4302534.4151849/94‑1 (MQ=60)
AGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTAATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGGTATCAACGGAG > SRR4302534.2616683/1‑94 (MQ=60)
GCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGT < SRR4302534.1003420/94‑1 (MQ=60)
GCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGT < SRR4302534.1711055/94‑1 (MQ=60)
GCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGT < SRR4302534.5065874/94‑1 (MQ=60)
GGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTA < SRR4302534.1075294/94‑1 (MQ=60)
CGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTA < SRR4302534.1158353/94‑1 (MQ=60)
CGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTA < SRR4302534.4850603/94‑1 (MQ=60)
CGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTA < SRR4302534.2480579/94‑1 (MQ=60)
CGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTA < SRR4302534.1339131/94‑1 (MQ=60)
GACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAA > SRR4302534.901436/1‑94 (MQ=60)
GACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAA > SRR4302534.1799245/1‑94 (MQ=60)
ACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAA > SRR4302534.4291081/1‑94 (MQ=60)
CCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAAC > SRR4302534.5413780/1‑94 (MQ=60)
CCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAAC > SRR4302534.6603340/1‑94 (MQ=60)
CGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACC < SRR4302534.2618653/94‑1 (MQ=60)
GCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCT < SRR4302534.5916193/94‑1 (MQ=60)
GCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCT < SRR4302534.2812643/94‑1 (MQ=60)
GCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCT > SRR4302534.3685431/1‑94 (MQ=60)
GCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCT > SRR4302534.1891581/1‑94 (MQ=60)
GCACCATCTGCCGGAATCAGATGTAACTGCGCCAGTTCATCAATATTATTGAGCACGTCGGCGAAGCGGGTGAGGTTATCAACGGAGTAAcact > SRR4302534.6403801/1‑90 (MQ=60)
ACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCTGG < SRR4302534.438100/94‑1 (MQ=60)
ACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCTGG > SRR4302534.6237585/1‑94 (MQ=60)
ACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCTGG > SRR4302534.384232/1‑94 (MQ=60)
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TTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCTGG > NC_000913/1358178‑1358363
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
