Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
744 |
338.8 |
17650688 |
97.8% |
17262372 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,358,270 |
G→A |
G221G (GGC→GGT) |
b1297 ← |
putative glutamine synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,358,270 | 0 | G | A | 99.7%
| 1006.9
/ NA
| 291 | G221G (GGC→GGT) | b1297 | putative glutamine synthetase |
| Reads supporting (aligned to +/- strand): ref base G (1/0); major base A (114/174); minor base C (0/1); total (115/176) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 303 total aligned reads displayed.
TAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAAC > NC_000913/1358180‑1358359
|
tAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCAcc > 1:7554473/1‑93 (MQ=255)
tAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCAcc < 1:3988501/93‑1 (MQ=255)
tAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCAcc > 2:5774156/1‑93 (MQ=255)
aGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCa < 1:5436255/93‑1 (MQ=255)
gTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAt < 1:6152690/93‑1 (MQ=255)
tGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATc < 2:6450857/93‑1 (MQ=255)
gCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCt > 1:8708973/1‑93 (MQ=255)
ccAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTg < 1:730789/93‑1 (MQ=255)
aGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGcc > 2:1395696/1‑93 (MQ=255)
cgcATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCgg < 1:8079017/93‑1 (MQ=255)
gcATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGa < 2:236205/93‑1 (MQ=255)
tcatcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATc > 2:4726356/1‑93 (MQ=255)
catcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCa < 1:3192365/93‑1 (MQ=255)
catcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCa > 1:1044385/1‑93 (MQ=255)
atcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAg < 1:5516287/93‑1 (MQ=255)
tcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGc < 2:7745227/93‑1 (MQ=255)
tcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGc < 1:5863746/93‑1 (MQ=255)
tcGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGc < 2:6982461/93‑1 (MQ=255)
cGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCt < 2:6946884/93‑1 (MQ=255)
cAGGCTTCCAGCACGTTATTAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGt < 1:2655616/93‑1 (MQ=255)
cAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGt > 1:623429/1‑93 (MQ=255)
cAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGt > 2:1697338/1‑93 (MQ=255)
aGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTa < 1:2835007/93‑1 (MQ=255)
gCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAAc > 2:7954601/1‑93 (MQ=255)
tCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTgc < 2:6641805/93‑1 (MQ=255)
ccAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTgcg > 2:7665673/1‑93 (MQ=255)
aGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGcc > 1:4101249/1‑93 (MQ=255)
aGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGcc < 2:2480609/93‑1 (MQ=255)
gCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCa < 2:5988181/93‑1 (MQ=255)
gCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCAACATCTGCCGGCATCAGCTGTAACTGCGCCa > 2:3149857/1‑93 (MQ=255)
cACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAg < 2:8803674/93‑1 (MQ=255)
cGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGtt > 2:8330933/1‑93 (MQ=255)
gTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc < 1:4781982/93‑1 (MQ=255)
gTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc > 2:2777419/1‑93 (MQ=255)
gTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc < 1:8298392/93‑1 (MQ=255)
gTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc > 2:630124/1‑93 (MQ=255)
ttATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGttaa > 2:1073207/1‑91 (MQ=255)
ttATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtca > 1:6892416/1‑93 (MQ=255)
aTCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtcatc < 2:3296419/93‑1 (MQ=255)
aTCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtcatc < 1:3500975/93‑1 (MQ=255)
tCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtcatca > 1:4652660/1‑93 (MQ=255)
cAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCaa < 1:8446947/93‑1 (MQ=255)
aGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAat < 1:1679936/93‑1 (MQ=255)
aGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAat > 2:3703714/1‑93 (MQ=255)
gTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAata < 1:7130047/93‑1 (MQ=255)
gTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAata < 1:2071087/93‑1 (MQ=255)
gTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAata < 2:214296/93‑1 (MQ=255)
tATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAatat < 2:6862686/93‑1 (MQ=255)
aTGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATc < 1:6354660/93‑1 (MQ=255)
tGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCa < 1:1337839/93‑1 (MQ=255)
gTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCAtt > 2:6181512/1‑93 (MQ=255)
aaaGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGa > 1:7302412/1‑93 (MQ=255)
aaaGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGa < 1:915901/93‑1 (MQ=255)
aaaGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGa < 2:7415490/93‑1 (MQ=255)
aaGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTATAACTGCGCCAGTTCATCAATATCATTGAg > 2:5405723/1‑93 (MQ=255)
aGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAga > 2:3488002/1‑92 (MQ=255)
aGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGc > 2:867170/1‑93 (MQ=255)
aGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGc < 2:5828905/93‑1 (MQ=255)
ggTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCa < 2:4577506/93‑1 (MQ=255)
agTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCa < 1:1986739/92‑1 (MQ=255)
gTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCAc < 1:3735297/93‑1 (MQ=255)
gTTGACTTCAAACTGACCCGGCTAGGCCTCCGAGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCAc < 1:4889531/93‑1 (MQ=255)
ttGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACg > 1:7971300/1‑93 (MQ=255)
tGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGt < 2:3060657/93‑1 (MQ=255)
tttCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCgg < 2:1910569/93‑1 (MQ=255)
ttCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGc < 1:6707287/93‑1 (MQ=255)
aaaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGaa < 1:4255940/93‑1 (MQ=255)
aaaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGaa > 1:5944603/1‑93 (MQ=255)
aaaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGaa > 2:1972030/1‑93 (MQ=255)
aaaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGaa > 1:3372969/1‑93 (MQ=255)
aaCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAg < 1:3022932/93‑1 (MQ=255)
aCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAgg > 2:5052173/1‑92 (MQ=255)
aCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGt < 2:4383060/93‑1 (MQ=255)
aCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGt > 2:4974722/1‑93 (MQ=255)
aCTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGt < 1:3312280/93‑1 (MQ=255)
cggACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTg < 2:820550/91‑1 (MQ=255)
cTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTg < 2:7709496/93‑1 (MQ=255)
aCCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGtt > 2:5147328/1‑93 (MQ=255)
aCCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGtt < 2:7072975/93‑1 (MQ=255)
cccGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTg > 1:2480587/1‑93 (MQ=255)
ccGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGa < 1:1483320/93‑1 (MQ=255)
cGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAg < 1:186891/93‑1 (MQ=255)
cGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAg > 2:227709/1‑93 (MQ=255)
ggCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAgg < 2:3747078/93‑1 (MQ=255)
ggCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAgg < 1:7049059/93‑1 (MQ=255)
gCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGt > 2:8081871/1‑93 (MQ=255)
gCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGt < 1:6596658/93‑1 (MQ=255)
cGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGtt < 1:692791/93‑1 (MQ=255)
gAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTa > 1:3270726/1‑93 (MQ=255)
gAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTa < 1:747390/93‑1 (MQ=255)
aGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGCTAt > 1:5780380/1‑93 (MQ=255)
ccTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCaa < 1:2234862/93‑1 (MQ=255)
ccTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCaa > 1:5283205/1‑93 (MQ=255)
tCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACg > 1:5645993/1‑93 (MQ=255)
aGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGa < 2:3618974/93‑1 (MQ=255)
aGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGa < 1:3944007/93‑1 (MQ=255)
aGCAACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGa < 2:5667460/93‑1 (MQ=255)
gCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAg < 2:177148/93‑1 (MQ=255)
cGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGt > 1:3455794/1‑93 (MQ=255)
ccGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTaaa < 1:7779685/93‑1 (MQ=255)
|
TAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAAC > NC_000913/1358180‑1358359
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCTGG > NC_000913/1358179‑1358363
|
TTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACC < SRR4302541.8106330/94‑1 (MQ=60)
TTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACC > SRR4302541.7635202/1‑94 (MQ=60)
TAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCA < SRR4302541.4028005/94‑1 (MQ=60)
TAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCA > SRR4302541.2746119/1‑94 (MQ=60)
AGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCAT < SRR4302541.5492034/94‑1 (MQ=60)
GTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATC < SRR4302541.6215553/94‑1 (MQ=60)
TGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCT > SRR4302541.8802149/1‑94 (MQ=60)
GCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTG < SRR4302541.2021932/94‑1 (MQ=60)
CCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGC < SRR4302541.737726/94‑1 (MQ=60)
CCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGC > SRR4302541.7499069/1‑94 (MQ=60)
CAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCC < SRR4302541.1452686/94‑1 (MQ=60)
AGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCG > SRR4302541.4041465/1‑94 (MQ=60)
GCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGGCCGCACCATCTGCCGG < SRR4302541.7049773/94‑1 (MQ=60)
GCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGG < SRR4302541.489501/94‑1 (MQ=60)
CGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGA < SRR4302541.8167646/94‑1 (MQ=60)
ATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACAGCACCATCTGCCGGAATC > SRR4302541.1229707/1‑94 (MQ=60)
ATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGGTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCTCCATCTGCCGGAATA > SRR4302541.2314084/1‑94 (MQ=60)
TCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCA < SRR4302541.7183529/94‑1 (MQ=60)
TCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCA > SRR4302541.1054060/1‑94 (MQ=60)
CATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAG < SRR4302541.3224614/94‑1 (MQ=60)
ATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGC < SRR4302541.5572755/94‑1 (MQ=60)
TCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCT < SRR4302541.3165384/94‑1 (MQ=60)
TCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCT < SRR4302541.5923396/94‑1 (MQ=60)
CGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTG < SRR4302541.8154540/94‑1 (MQ=60)
CGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTG > SRR4302541.4361154/1‑94 (MQ=60)
CGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTG < SRR4302541.2550927/94‑1 (MQ=60)
CGCAGCCTTGCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTG < SRR4302541.7187022/94‑1 (MQ=60)
GCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGT > SRR4302541.629283/1‑94 (MQ=60)
GCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGT < SRR4302541.8859805/94‑1 (MQ=60)
GCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGT < SRR4302541.7001636/94‑1 (MQ=60)
GCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGT > SRR4302541.413973/1‑94 (MQ=60)
GCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGT > SRR4302541.5590059/1‑94 (MQ=60)
CAGGCTTCCAGCACGTTATTAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTA < SRR4302541.2682035/94‑1 (MQ=60)
CAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTA < SRR4302541.3392135/94‑1 (MQ=60)
CAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTA > SRR4302541.7383478/1‑94 (MQ=60)
AGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAA < SRR4302541.2863549/94‑1 (MQ=60)
AGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAA > SRR4302541.2950935/1‑94 (MQ=60)
AGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAA > SRR4302541.1774563/1‑94 (MQ=60)
GGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAAC < SRR4302541.8209452/94‑1 (MQ=60)
CTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGATGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTG > SRR4302541.6215302/1‑94 (MQ=60)
CTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTG < SRR4302541.7086460/94‑1 (MQ=60)
TTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGC < SRR4302541.3504073/94‑1 (MQ=60)
CAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCC > SRR4302541.8066241/1‑94 (MQ=60)
CAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCC < SRR4302541.5899467/94‑1 (MQ=60)
CAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCC < SRR4302541.5899468/94‑1 (MQ=60)
CAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCC > SRR4302541.4141733/1‑94 (MQ=60)
CAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCC < SRR4302541.5771890/94‑1 (MQ=60)
CAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCC > SRR4302541.4971601/1‑94 (MQ=60)
CAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCC < SRR4302541.684742/94‑1 (MQ=60)
AGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCA < SRR4302541.477512/94‑1 (MQ=60)
CACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGT < SRR4302541.8354178/94‑1 (MQ=60)
CACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGT > SRR4302541.3272223/1‑94 (MQ=60)
ACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTT < SRR4302541.3346551/94‑1 (MQ=60)
ACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTT > SRR4302541.3629243/1‑94 (MQ=60)
GTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCA > SRR4302541.6965972/1‑94 (MQ=60)
GTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCA > SRR4302541.1713838/1‑94 (MQ=60)
GTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCA < SRR4302541.8388627/94‑1 (MQ=60)
GTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCA > SRR4302541.4651721/1‑94 (MQ=60)
GTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCA < SRR4302541.4830792/94‑1 (MQ=60)
TTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCAT < SRR4302541.6998658/94‑1 (MQ=60)
TATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATC > SRR4302541.3877271/1‑94 (MQ=60)
TATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATC > SRR4302541.1393871/1‑94 (MQ=60)
TATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATC > SRR4302541.4869759/1‑94 (MQ=60)
ATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCA > SRR4302541.4700028/1‑94 (MQ=60)
ATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCA < SRR4302541.3536118/94‑1 (MQ=60)
ATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCA < SRR4302541.3536117/94‑1 (MQ=60)
CAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAAT < SRR4302541.8538145/94‑1 (MQ=60)
AGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATA < SRR4302541.1696464/94‑1 (MQ=60)
AGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATA < SRR4302541.5998312/94‑1 (MQ=60)
GTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATAT < SRR4302541.4792032/94‑1 (MQ=60)
GTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATAT < SRR4302541.2091103/94‑1 (MQ=60)
GTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATAT < SRR4302541.7206013/94‑1 (MQ=60)
GTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATAT < SRR4302541.2071579/94‑1 (MQ=60)
ATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCA > SRR4302541.288765/1‑94 (MQ=60)
ATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCA < SRR4302541.6419627/94‑1 (MQ=60)
TGGTAAAGGTTGATTTCAAACTGCCCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCAT < SRR4302541.539650/94‑1 (MQ=60)
TGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCAT < SRR4302541.5956260/94‑1 (MQ=60)
TGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCAT < SRR4302541.1351010/94‑1 (MQ=60)
GGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATT < SRR4302541.7588697/94‑1 (MQ=60)
GTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTG < SRR4302541.8881794/94‑1 (MQ=60)
GTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTG < SRR4302541.7482928/94‑1 (MQ=60)
GTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTG < SRR4302541.1071479/94‑1 (MQ=60)
GTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTG < SRR4302541.5569134/94‑1 (MQ=60)
GTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTG > SRR4302541.3341194/1‑94 (MQ=60)
TAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGA > SRR4302541.7380364/1‑94 (MQ=60)
TAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGA < SRR4302541.8582817/94‑1 (MQ=60)
AAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAG < SRR4302541.924465/94‑1 (MQ=60)
AAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGC < SRR4302541.924498/94‑1 (MQ=60)
AAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGC < SRR4302541.3986232/94‑1 (MQ=60)
AGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCA > SRR4302541.420378/1‑94 (MQ=60)
AGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCA < SRR4302541.3604711/94‑1 (MQ=60)
GGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCAC < SRR4302541.6270146/94‑1 (MQ=60)
AGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCAC < SRR4302541.2005949/94‑1 (MQ=60)
GTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACG > SRR4302541.8059141/1‑94 (MQ=60)
GTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACG < SRR4302541.3772903/94‑1 (MQ=60)
GTTGACTTCAAACTGACCCGGCTAGGCCTCCGAGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACG < SRR4302541.4939421/94‑1 (MQ=60)
TGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTC > SRR4302541.3076024/1‑94 (MQ=60)
TGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTC > SRR4302541.6293045/1‑94 (MQ=60)
gataacaacctgcCCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGAAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCG < SRR4302541.7575539/81‑1 (MQ=60)
TTTCAAACTGACCCGGCGAGGCCTCAGCCACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGC < SRR4302541.2176237/94‑1 (MQ=60)
TTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCG < SRR4302541.6778101/94‑1 (MQ=60)
TTCAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCG < SRR4302541.6778214/94‑1 (MQ=60)
CAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAA > SRR4302541.3406605/1‑94 (MQ=60)
CAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAA > SRR4302541.98221/1‑94 (MQ=60)
CAAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAA > SRR4302541.6005174/1‑94 (MQ=60)
AAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAG < SRR4302541.7382922/94‑1 (MQ=60)
AAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAG < SRR4302541.4298482/94‑1 (MQ=60)
AAACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGACGGCGATG > SRR4302541.6746973/1‑94 (MQ=60)
AACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGT < SRR4302541.3053454/94‑1 (MQ=60)
AACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGT < SRR4302541.781047/94‑1 (MQ=60)
AACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGT < SRR4302541.3410836/94‑1 (MQ=60)
ACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTG < SRR4302541.3345535/94‑1 (MQ=60)
ACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTG < SRR4302541.7563160/94‑1 (MQ=60)
ACTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTG < SRR4302541.7332295/94‑1 (MQ=60)
CTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGG < SRR4302541.6506885/94‑1 (MQ=60)
CTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGG > SRR4302541.843579/1‑94 (MQ=60)
CTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGG > SRR4302541.638154/1‑94 (MQ=60)
CTGACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGG < SRR4302541.3806135/94‑1 (MQ=60)
GACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTT > SRR4302541.1639205/1‑94 (MQ=60)
GACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTT < SRR4302541.8034410/94‑1 (MQ=60)
GCCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTG < SRR4302541.7753731/94‑1 (MQ=60)
ACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTG > SRR4302541.2505478/1‑94 (MQ=60)
ACCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTG > SRR4302541.5554647/1‑94 (MQ=60)
CCCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGG > SRR4302541.2294536/1‑94 (MQ=60)
CCGGCGAGTCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAG < SRR4302541.3302618/94‑1 (MQ=60)
CCGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAG < SRR4302541.1497906/94‑1 (MQ=60)
CGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGG < SRR4302541.188299/94‑1 (MQ=60)
CGGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGG < SRR4302541.8450716/94‑1 (MQ=60)
GGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGT < SRR4302541.7124030/94‑1 (MQ=60)
GGCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGT > SRR4302541.8029372/1‑94 (MQ=60)
GCGAGGCCTCAGCGACCGCACCATCTTCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTT < SRR4302541.6664213/94‑1 (MQ=60)
GCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTT < SRR4302541.1886922/94‑1 (MQ=60)
GCGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTT < SRR4302541.6664212/94‑1 (MQ=60)
CGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGCGGTTA > SRR4302541.7323182/1‑94 (MQ=60)
CGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTA > SRR4302541.3303720/1‑94 (MQ=60)
CGAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTA < SRR4302541.699311/94‑1 (MQ=60)
GAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCGCGTCGGCGAAGTGGTTGAGGTTAT < SRR4302541.6182062/94‑1 (MQ=60)
GAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAT > SRR4302541.6280606/1‑94 (MQ=60)
GAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAT > SRR4302541.5784427/1‑94 (MQ=60)
GAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAT < SRR4302541.6625502/94‑1 (MQ=60)
GAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAT < SRR4302541.754467/94‑1 (MQ=60)
GAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTAT > SRR4302541.2756764/1‑94 (MQ=60)
GAGGCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGCTAT > SRR4302541.5839151/1‑94 (MQ=60)
GCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAA < SRR4302541.5618392/94‑1 (MQ=60)
GCCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAA > SRR4302541.5337597/1‑94 (MQ=60)
CCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAAC < SRR4302541.2256504/94‑1 (MQ=60)
CCTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAAC < SRR4302541.4124245/94‑1 (MQ=60)
CTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACG > SRR4302541.5474007/1‑94 (MQ=60)
CTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACG < SRR4302541.1923730/94‑1 (MQ=60)
CTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACG < SRR4302541.768008/94‑1 (MQ=60)
CTCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACG > SRR4302541.5703693/1‑94 (MQ=60)
TCAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGG > SRR4302541.8675275/1‑94 (MQ=60)
CAGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGA < SRR4302541.6367406/94‑1 (MQ=60)
AGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAG < SRR4302541.5297220/94‑1 (MQ=60)
AGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAG < SRR4302541.3983239/94‑1 (MQ=60)
AGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAG > SRR4302541.3458222/1‑94 (MQ=60)
AGCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAG < SRR4302541.2095251/94‑1 (MQ=60)
GCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGT > SRR4302541.3490323/1‑94 (MQ=60)
GCGACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGA > SRR4302541.2589923/1‑94 (MQ=60)
GACCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAA > SRR4302541.1554700/1‑94 (MQ=60)
CCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAAC < SRR4302541.7862449/94‑1 (MQ=60)
CCGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAAC > SRR4302541.3339020/1‑94 (MQ=60)
CGCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACC < SRR4302541.3996225/94‑1 (MQ=60)
GCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCT > SRR4302541.2868867/1‑94 (MQ=60)
GCACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCT < SRR4302541.925746/94‑1 (MQ=60)
ACCATCTGCCGGACTCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCTGG < SRR4302541.5486736/94‑1 (MQ=60)
ACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCTGG > SRR4302541.6354228/1‑94 (MQ=60)
ACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCTGG > SRR4302541.6354229/1‑94 (MQ=60)
ACCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCTGG < SRR4302541.5486735/94‑1 (MQ=60)
|
TTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCATCAATATCATTGAGCACGTCGGCGAAGTGGTTGAGGTTATCAACGGAGTAAACCTGG > NC_000913/1358179‑1358363
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
