Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
884 |
257.2 |
12958910 |
96.9% |
12557183 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,391,027 |
A→G |
intergenic (+113/‑203) |
ycjZ → / → b1329 |
putative transcriptional regulator LYSR‑type/putative transport periplasmic protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,391,027 | 0 | A | G | 100.0%
| 963.2
/ NA
| 273 | intergenic (+113/‑203) | ycjZ/b1329 | putative transcriptional regulator LYSR‑type/putative transport periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (134/139); total (134/139) |
Only 100 of 282 total aligned reads displayed.
TTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTA > NC_000913/1390937‑1391116
|
ttaattCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGcc > 2:1303944/1‑93 (MQ=255)
tcttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGaaaa < 1:1916308/93‑1 (MQ=255)
cttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAAc > 2:2977556/1‑93 (MQ=255)
ttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACg > 2:2161827/1‑93 (MQ=255)
ttctCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACg > 1:3931868/1‑93 (MQ=255)
ctctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACggg < 2:2401564/93‑1 (MQ=255)
tctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGt > 1:835087/1‑93 (MQ=255)
tctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGt > 1:3687124/1‑93 (MQ=255)
tctTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGt > 2:105724/1‑93 (MQ=255)
ttAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGttt > 2:2289611/1‑93 (MQ=255)
ttAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGttt > 2:660779/1‑93 (MQ=255)
aaCGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGa > 2:195415/1‑93 (MQ=255)
aCGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGaa < 1:4159426/93‑1 (MQ=255)
aCGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGaa > 2:531669/1‑93 (MQ=255)
gTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACg > 1:5532606/1‑93 (MQ=255)
gTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACg < 1:4697835/93‑1 (MQ=255)
gTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGATTGAACg > 2:6355985/1‑93 (MQ=255)
tATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGt > 1:3564786/1‑93 (MQ=255)
tATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGt > 1:1181200/1‑93 (MQ=255)
aTTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTg < 2:4481942/93‑1 (MQ=255)
ttCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGc > 1:2148070/1‑93 (MQ=255)
tctcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCg < 2:5291215/93‑1 (MQ=255)
tctcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCg < 2:4924136/93‑1 (MQ=255)
tctcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCg > 2:84259/1‑93 (MQ=255)
tcAGTTCCTTTCAGCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGaa < 1:2372533/93‑1 (MQ=255)
tcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGaa < 1:2525782/93‑1 (MQ=255)
tcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGaa < 1:3731980/93‑1 (MQ=255)
tcAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGaa > 1:6036994/1‑93 (MQ=255)
aGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGc < 2:1874790/93‑1 (MQ=255)
gTTCCTTTCAACGTTTTGGTCA‑TTTTTATTCTTCGTACAATGGCGACAGATGCTTATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc > 1:3469197/1‑93 (MQ=255)
ttCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc > 2:2951283/1‑93 (MQ=255)
ttCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc > 2:2861729/1‑93 (MQ=255)
ttCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGccc > 2:6025304/1‑93 (MQ=255)
ccTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGa > 2:3705486/1‑93 (MQ=255)
cTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGaa < 1:5434118/93‑1 (MQ=255)
tttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAc < 2:531222/93‑1 (MQ=255)
tttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAc > 1:3106193/1‑93 (MQ=255)
tttCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAACCCCGAAc < 1:6133554/93‑1 (MQ=255)
cAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTa < 2:5574347/93‑1 (MQ=255)
cAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTa < 2:3411186/93‑1 (MQ=255)
aaCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAg < 2:3958310/93‑1 (MQ=255)
aCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgt > 2:5119030/1‑93 (MQ=255)
gTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAgtgt > 1:4665176/1‑93 (MQ=255)
ttttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGtt < 2:6126531/93‑1 (MQ=255)
tttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTc < 2:4002706/93‑1 (MQ=255)
tttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTc < 1:689953/93‑1 (MQ=255)
tttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTc < 2:1587264/93‑1 (MQ=255)
ttGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCg < 2:70277/93‑1 (MQ=255)
ggTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCggt > 2:3275704/1‑92 (MQ=255)
tCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGt > 2:2444129/1‑93 (MQ=255)
cATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGtt < 2:1644896/93‑1 (MQ=255)
cATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGtt > 2:4763246/1‑93 (MQ=255)
cATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGtt < 1:1703406/93‑1 (MQ=255)
aTTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTc < 1:6330151/93‑1 (MQ=255)
ttttttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCt < 2:2087855/93‑1 (MQ=255)
tttttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTa > 2:4233986/1‑93 (MQ=255)
ttttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAt < 2:1026167/93‑1 (MQ=255)
tttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtg > 1:5751683/1‑93 (MQ=255)
tttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtg < 2:2813386/93‑1 (MQ=255)
ttATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTAtgt < 1:1099466/93‑1 (MQ=255)
aTTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGc < 1:4837213/93‑1 (MQ=255)
ttcttcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCt < 1:4231872/93‑1 (MQ=255)
tcttcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCtt < 1:2907574/93‑1 (MQ=255)
ttcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTa > 2:921394/1‑93 (MQ=255)
ttcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTa > 1:6185744/1‑93 (MQ=255)
tcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTAc < 2:6277368/93‑1 (MQ=255)
tcGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTAc < 2:2376343/93‑1 (MQ=255)
cGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTAcc > 2:3577409/1‑93 (MQ=255)
cGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTAcc > 2:5429986/1‑93 (MQ=255)
aCAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCa > 1:5408092/1‑93 (MQ=255)
aCAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCa > 1:432515/1‑93 (MQ=255)
aCAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGGTCTATGTGCTTTACCGCa > 1:4994036/1‑93 (MQ=255)
cAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAt < 2:3745387/93‑1 (MQ=255)
aaTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAtt < 2:3660454/93‑1 (MQ=255)
aaTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAtt > 1:2226594/1‑93 (MQ=255)
aaTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAtt > 1:3314415/1‑93 (MQ=255)
aTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCAttt > 2:268797/1‑93 (MQ=255)
ggCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTg > 1:3016303/1‑93 (MQ=255)
ggCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTg > 2:3818162/1‑93 (MQ=255)
cGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGga < 1:1347144/93‑1 (MQ=255)
cAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGCGCTTTACCGCATTTTGGAGAc > 2:3141606/1‑93 (MQ=255)
aGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACt < 2:575145/93‑1 (MQ=255)
gATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACta < 2:4835886/93‑1 (MQ=255)
gATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACta > 2:5945659/1‑93 (MQ=255)
aTGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtat < 1:2098571/93‑1 (MQ=255)
aTGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtat < 2:3538505/93‑1 (MQ=255)
tGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatt < 1:2773600/93‑1 (MQ=255)
tGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatt < 2:538139/93‑1 (MQ=255)
gCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACtatta < 1:2702645/93‑1 (MQ=255)
gATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTAttt < 1:1419586/93‑1 (MQ=255)
gATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTAttt > 2:772515/1‑93 (MQ=255)
aTTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTAtttc > 1:156288/1‑92 (MQ=255)
ttATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTac > 2:5699021/1‑93 (MQ=255)
atgatgCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTacac > 1:944434/1‑93 (MQ=255)
atgatgCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTacac < 2:4692707/93‑1 (MQ=255)
gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa > 2:4434260/1‑93 (MQ=255)
gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa > 1:4546641/1‑93 (MQ=255)
gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa < 1:5224835/93‑1 (MQ=255)
gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa > 2:1188483/1‑93 (MQ=255)
gATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTa < 1:102488/93‑1 (MQ=255)
|
TTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTA > NC_000913/1390937‑1391116
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AATTTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAAATC > NC_000913/1390934‑1391120
|
AATTTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATG > SRR4302534.3640977/1‑94 (MQ=60)
AATTTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATG > SRR4302534.416989/1‑94 (MQ=60)
TTTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCC < SRR4302534.4334898/94‑1 (MQ=60)
TTTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCC > SRR4302534.6601340/1‑94 (MQ=60)
TTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCG < SRR4302534.6102533/94‑1 (MQ=60)
ATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAA > SRR4302534.2259136/1‑94 (MQ=60)
ATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAA > SRR4302534.3132035/1‑94 (MQ=60)
TTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAA > SRR4302534.2221852/1‑94 (MQ=60)
TCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAAC < SRR4302534.1966351/94‑1 (MQ=60)
CTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACG > SRR4302534.2378852/1‑94 (MQ=60)
CTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACG > SRR4302534.4037189/1‑94 (MQ=60)
CTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACG > SRR4302534.3227798/1‑94 (MQ=60)
TTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGG < SRR4302534.4916891/94‑1 (MQ=60)
TCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGG < SRR4302534.4975412/94‑1 (MQ=60)
TCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGG < SRR4302534.306266/94‑1 (MQ=60)
TCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGG > SRR4302534.4271587/1‑94 (MQ=60)
CTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGT > SRR4302534.1612535/1‑94 (MQ=60)
CTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGT > SRR4302534.856110/1‑94 (MQ=60)
CTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGT > SRR4302534.3786267/1‑94 (MQ=60)
CTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGT < SRR4302534.2905739/94‑1 (MQ=60)
CTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGT < SRR4302534.2531831/94‑1 (MQ=60)
CTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGT < SRR4302534.2077749/94‑1 (MQ=60)
CTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTT > SRR4302534.1419109/1‑94 (MQ=60)
CTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTT > SRR4302534.547454/1‑94 (MQ=60)
TAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGA > SRR4302534.749068/1‑94 (MQ=60)
TAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGA > SRR4302534.5908520/1‑94 (MQ=60)
AACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAA > SRR4302534.6408159/1‑94 (MQ=60)
ACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAAC < SRR4302534.4271745/94‑1 (MQ=60)
CGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACG < SRR4302534.4726169/94‑1 (MQ=60)
CGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACG > SRR4302534.5681931/1‑94 (MQ=60)
CGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACG > SRR4302534.6220131/1‑94 (MQ=60)
GTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGT < SRR4302534.4825348/94‑1 (MQ=60)
GTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGT > SRR4302534.1212250/1‑94 (MQ=60)
GTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGT > SRR4302534.3660676/1‑94 (MQ=60)
GTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGT > SRR4302534.1574654/1‑94 (MQ=60)
TATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTG < SRR4302534.4289869/94‑1 (MQ=60)
ATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGC > SRR4302534.2204752/1‑94 (MQ=60)
ATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGC < SRR4302534.6506926/94‑1 (MQ=60)
ATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGC < SRR4302534.3626245/94‑1 (MQ=60)
CTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAA > SRR4302534.6201061/1‑94 (MQ=60)
TCAGTTCCTTTCAGCGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAG < SRR4302534.2435532/94‑1 (MQ=60)
TCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAG < SRR4302534.2592805/94‑1 (MQ=60)
TCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAG > SRR4302534.1856237/1‑94 (MQ=60)
TCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAG < SRR4302534.3832260/94‑1 (MQ=60)
TCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAG < SRR4302534.1103543/94‑1 (MQ=60)
AGTTCCTTTCAACGTTTTGGTCA‑TTTTTATTCTTCGTACAATGGCGACAGATGCTTATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCC > SRR4302534.3562444/1‑94 (MQ=60)
TTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCG > SRR4302534.2789599/1‑94 (MQ=60)
TTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCG > SRR4302534.5658746/1‑94 (MQ=60)
TTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCG < SRR4302534.4287896/94‑1 (MQ=60)
TTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCG < SRR4302534.3947602/94‑1 (MQ=60)
CTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAC < SRR4302534.5580438/94‑1 (MQ=60)
CTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAC < SRR4302534.4800000/94‑1 (MQ=60)
CTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAC > SRR4302534.3187884/1‑94 (MQ=60)
CTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAC < SRR4302534.308052/94‑1 (MQ=60)
CTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAAC > SRR4302534.4647231/1‑94 (MQ=60)
TTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACG < SRR4302534.4157499/94‑1 (MQ=60)
TTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAACCCCGAACG < SRR4302534.6300396/94‑1 (MQ=60)
CAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAG < SRR4302534.1992196/94‑1 (MQ=60)
CAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAG < SRR4302534.1023943/94‑1 (MQ=60)
CAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAG > SRR4302534.2845713/1‑94 (MQ=60)
AACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGT < SRR4302534.446066/94‑1 (MQ=60)
CGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGT < SRR4302534.3284039/94‑1 (MQ=60)
CGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGT < SRR4302534.5889094/94‑1 (MQ=60)
CGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGT > SRR4302534.4791833/1‑94 (MQ=60)
TTTGGTCATTTTTTATTCTTCGTACATTGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCG < SRR4302534.5343792/94‑1 (MQ=60)
TTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCG < SRR4302534.706824/94‑1 (MQ=60)
TTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGG < SRR4302534.3572111/94‑1 (MQ=60)
TTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGG > SRR4302534.4939513/1‑94 (MQ=60)
GGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAG < SRR4302534.239109/94‑1 (MQ=60)
GGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAG > SRR4302534.3806186/1‑94 (MQ=60)
GGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAG < SRR4302534.2969191/94‑1 (MQ=60)
CATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTC > SRR4302534.848784/1‑94 (MQ=60)
CATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTC < SRR4302534.1747668/94‑1 (MQ=60)
ATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCT < SRR4302534.5511643/94‑1 (MQ=60)
ATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCT < SRR4302534.6501183/94‑1 (MQ=60)
TTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATG > SRR4302534.5907647/1‑94 (MQ=60)
TTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATG < SRR4302534.6290001/94‑1 (MQ=60)
TTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTG < SRR4302534.3413590/94‑1 (MQ=60)
TTATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTG < SRR4302534.1128109/94‑1 (MQ=60)
ATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCT < SRR4302534.3470963/94‑1 (MQ=60)
ATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCT < SRR4302534.5572337/94‑1 (MQ=60)
ATTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCT < SRR4302534.4968436/94‑1 (MQ=60)
TTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTT < SRR4302534.4345938/94‑1 (MQ=60)
TTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTT > SRR4302534.441310/1‑94 (MQ=60)
TTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTT > SRR4302534.3768284/1‑94 (MQ=60)
TTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTT < SRR4302534.5623761/94‑1 (MQ=60)
TTCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTT < SRR4302534.935260/94‑1 (MQ=60)
TCTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTT < SRR4302534.2983892/94‑1 (MQ=60)
CTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTA > SRR4302534.6354096/1‑94 (MQ=60)
CTTCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTA > SRR4302534.5194618/1‑94 (MQ=60)
TCGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACC > SRR4302534.5823242/1‑94 (MQ=60)
CGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCG < SRR4302534.64401/94‑1 (MQ=60)
CGTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCG > SRR4302534.215888/1‑94 (MQ=60)
GTACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGC > SRR4302534.2160270/1‑94 (MQ=60)
TACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCA > SRR4302534.443543/1‑94 (MQ=60)
TACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCA > SRR4302534.5553599/1‑94 (MQ=60)
TACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCA > SRR4302534.1447535/1‑94 (MQ=60)
TACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGGTCTATGTGCTTTACCGCA > SRR4302534.5129104/1‑94 (MQ=60)
TACAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGACCGAACGTAGTGTTCGGAGTTCTAGTTGCTTTACCGCA > SRR4302534.3793419/1‑94 (MQ=60)
CAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATT > SRR4302534.3402972/1‑94 (MQ=60)
CAATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATT > SRR4302534.2285574/1‑94 (MQ=60)
AATGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTT > SRR4302534.913616/1‑94 (MQ=60)
TGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTG < SRR4302534.1141372/94‑1 (MQ=60)
TGGCGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTG > SRR4302534.3095267/1‑94 (MQ=60)
CGACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAG < SRR4302534.1382652/94‑1 (MQ=60)
GACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGA < SRR4302534.1279622/94‑1 (MQ=60)
GACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGA > SRR4302534.478313/1‑94 (MQ=60)
ACAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGAC < SRR4302534.4356846/94‑1 (MQ=60)
CAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACT > SRR4302534.3691117/1‑94 (MQ=60)
CAGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGCGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACT > SRR4302534.1846789/1‑94 (MQ=60)
AGATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTA < SRR4302534.2715401/94‑1 (MQ=60)
ATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATT < SRR4302534.1363581/94‑1 (MQ=60)
ATGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATT < SRR4302534.2153639/94‑1 (MQ=60)
TGCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTA < SRR4302534.2846583/94‑1 (MQ=60)
TCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTAT < SRR4302534.5087965/94‑1 (MQ=60)
GCTGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTAT < SRR4302534.2774025/94‑1 (MQ=60)
TGATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTT < SRR4302534.6343987/94‑1 (MQ=60)
GATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTC > SRR4302534.160376/1‑94 (MQ=60)
GATTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTA < SRR4302534.1456938/94‑1 (MQ=60)
TTATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACA > SRR4302534.2713666/1‑94 (MQ=60)
TATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACAC > SRR4302534.968462/1‑94 (MQ=60)
TATGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACAC > SRR4302534.147536/1‑94 (MQ=60)
TGATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTA > SRR4302534.4669900/1‑94 (MQ=60)
GATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAA < SRR4302534.5365865/94‑1 (MQ=60)
GATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAA < SRR4302534.1138947/94‑1 (MQ=60)
GATGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAA < SRR4302534.105226/94‑1 (MQ=60)
TGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAAAT > SRR4302534.6368469/1‑94 (MQ=60)
TGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAAAT < SRR4302534.3180051/94‑1 (MQ=60)
TGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAAAT < SRR4302534.2797582/94‑1 (MQ=60)
TGCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAAAT > SRR4302534.1655121/1‑94 (MQ=60)
GCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAAATC < SRR4302534.5571755/94‑1 (MQ=60)
GCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAAATC > SRR4302534.4519914/1‑94 (MQ=60)
GCCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAAATC < SRR4302534.4200984/94‑1 (MQ=60)
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AATTTAATTCTTCTCTTAACGTATTCTCAGTTCCTTTCAACGTTTTGGTCATTTTTTATTCTTCGTACAATGGCGACAGATGCTGATTATGATACCGAAAACGGGTTTGAACGTGCGAAGCCCGAACGTAGTGTTCGGAGTTCTATGTGCTTTACCGCATTTTGGAGACTATTATTTACACTAAATC > NC_000913/1390934‑1391120
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
